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273 Results Found

  • Article
  • Open Access
2 Citations
1,370 Views
20 Pages

The three-spot seahorse (Hippocampus trimaculatus) is an economically important marine species in the northern South China Sea (NSCS). However, due to overfishing and marine environmental changes, its wild populations have been gradually depleted. To...

(This article belongs to the Section Marine Biology)
  • Article
  • Open Access
8 Citations
5,853 Views
14 Pages

26 November 2021

Temperature is often used to infer how climate influences wildlife distributions; yet, other parameters also contribute, separately and combined, with effects varying across geographical scales. Here, we used an unoccupied aircraft system to explore...

(This article belongs to the Special Issue Ecological Applications of Drone-Based Remote Sensing)
  • Article
  • Open Access
16 Citations
4,813 Views
21 Pages

Functional Interdependence in Coupled Dissipative Structures: Physical Foundations of Biological Coordination

  • Benjamin De Bari,
  • Alexandra Paxton,
  • Dilip K. Kondepudi,
  • Bruce A. Kay and
  • James A. Dixon

15 May 2021

Coordination within and between organisms is one of the most complex abilities of living systems, requiring the concerted regulation of many physiological constituents, and this complexity can be particularly difficult to explain by appealing to phys...

(This article belongs to the Special Issue Entropy and Social Physics)
  • Article
  • Open Access
2 Citations
2,124 Views
14 Pages

Viral Dynamics in the Tropical Pacific Ocean: A Comparison between Within and Outside a Warm Eddy

  • Patrichka Wei-Yi Chen,
  • Madeline Olivia,
  • Gwo-Ching Gong,
  • Sen Jan and
  • An-Yi Tsai

11 June 2024

In mesoscale eddies, the chemical properties and biological composition are different from those in the surrounding water due to their unique physical processes. The mechanism of physical–biological coupling in warm-core eddies is unclear, espe...

(This article belongs to the Special Issue Diversity and Evolution of Viruses in Ecosystem)
  • Article
  • Open Access
4 Citations
2,703 Views
14 Pages

Using a three-dimensional coupled physical–biological model, this paper explores the effect that short-lived wind events lasting a few days in duration have on the creation of phytoplankton blooms in island wakes. Findings show that wind-induce...

(This article belongs to the Section Physical Oceanography)
  • Article
  • Open Access
607 Views
19 Pages

Spring phytoplankton bloom mechanisms in the Bohai Sea show clear spatial differences, but the physical–biological coupling in the ice-covered Liaodong Bay (LDB) remains poorly understood. Utilizing satellite observations and high-resolution re...

(This article belongs to the Section Marine Ecology)
  • Article
  • Open Access
52 Citations
9,904 Views
18 Pages

Climate Variability and Oceanographic Settings Associated with Interannual Variability in the Initiation of Dinophysis acuminata Blooms

  • Patricio A. Díaz,
  • Beatriz Reguera,
  • Manuel Ruiz-Villarreal,
  • Yolanda Pazos and ,
  • Lourdes Velo-Suárez,
  • Henrick Berger and
  • Marc Sourisseau
  • + 2 authors+ 0 author

16 August 2013

In 2012, there were exceptional blooms of D. acuminata in early spring in what appeared to be a mesoscale event affecting Western Iberia and the Bay of Biscay. The objective of this work was to identify common climatic patterns to explain the observe...

(This article belongs to the Special Issue Selected Papers from Canadian Diarrhetic Shellfish Poisoning Symposium)
  • Review
  • Open Access
383 Citations
35,719 Views
28 Pages

24 April 2022

Artificial-intelligence methods and machine-learning models have demonstrated their ability to optimize, model, and automate critical water- and wastewater-treatment applications, natural-systems monitoring and management, and water-based agriculture...

(This article belongs to the Section Wastewater Treatment and Reuse)
  • Article
  • Open Access
837 Views
19 Pages

Integrating In Situ Measurements and Satellite Imagery for Coastal Physical and Biological Analysis in the Cape Fear Coastal Region

  • Mitchell Torkelson,
  • Philip J. Bresnahan,
  • Sara Rivero-Calle,
  • Md Masud-Ul-Alam and ,
  • Robert J. W. Brewin and
  • David Wells
  • + 1 author+ 0 author

12 May 2026

Monitoring coastal and estuarine dynamics is crucial for understanding coupled physical, biogeochemical, and human impacts on coastal waters. Motivated by the availability of high spatial resolution ocean color data from the proof-of-concept SeaHawk-...

(This article belongs to the Section Ocean Remote Sensing)
  • Article
  • Open Access
1 Citations
1,117 Views
14 Pages

Environmental Drivers of the Epipelagic Pteropod Community Structure in the Deep-Water Basin of the Southern Gulf of Mexico During Summer

  • Erik Coria-Monter,
  • Adolfo Gracia,
  • Elizabeth Durán-Campos,
  • César Flores-Coto and ,
  • Zayra López-Cabello,
  • Magali Roa-Venicio and
  • Alejandra Itzel Domínguez-Tavera
  • + 2 authors+ 0 author

4 June 2026

Holoplanktonic mollusks (Mollusca: Gastropoda: Pteropoda) are vital structural and functional components of marine zooplankton communities, characterized by high sensitivity to physicochemical shifts in the water column. Consequently, multidisciplina...

  • Review
  • Open Access
1 Citations
515 Views
27 Pages

Advances in Remote Sensing-Based Studies on Environmental Characteristics and Formation Mechanisms of Purpleback Flying Squid Fishing Grounds

  • Wei Fan,
  • Ruizhi Zhou,
  • Xuesen Cui,
  • Yongchuang Shi and ,
  • Yumei Wu,
  • Fenghua Tang and
  • Guoqing Zhao
  • + 2 authors+ 0 author

3 August 2026

The purpleback flying squid (Sthenoteuthis oualaniensis) is an important commercially exploited cephalopod resource in tropical open oceans. The formation and spatial variability of its fishing grounds are jointly regulated by local marine environmen...

(This article belongs to the Special Issue Application of Remote Sensing to Fisheries)
  • Review
  • Open Access
80 Citations
9,415 Views
15 Pages

Connexins and Integrins in Exosomes

  • Motomu Shimaoka,
  • Eiji Kawamoto,
  • Arong Gaowa,
  • Takayuki Okamoto and
  • Eun Jeong Park

17 January 2019

Connexins and integrins, the two structurally and functionally distinct families of transmembrane proteins, have been shown to be inter-connected by various modes of cross-talk in cells, such as direct physical coupling via lateral contact, indirect...

(This article belongs to the Special Issue Gap Junctions and Connexins in Cancer Formation, Progression, and Therapy)
  • Review
  • Open Access
2 Citations
766 Views
26 Pages

Antibiotics in the Environment: Occurrence, Enhanced Removal Strategies and Future Prospects

  • Yinglu Tao,
  • Wenjun Xie,
  • Lei Xu,
  • Cailing Shi and ,
  • Xiangrui Wang,
  • Gaoqi Li and
  • Chufei Yu
  • + 2 authors+ 0 author

21 July 2026

The widespread occurrence of antibiotics in the environment threatens public health and ecosystem safety. This review summarizes the global occurrence of antibiotic contamination across the different environmental media, i.e., water systems, solid wa...

(This article belongs to the Special Issue Heavy Metals and Emerging Contaminants in Aquatic and Soil Environments: Migration, Transformation, Ecological Risks, and Remediation)
  • Article
  • Open Access
7 Citations
3,820 Views
19 Pages

Biophysical Submesoscale Processes in the Wake of Hurricane Ivan: Simulations and Satellite Observations

  • Travis A. Smith,
  • Jason K. Jolliff,
  • Nan D. Walker and
  • Stephanie Anderson

23 October 2019

Tropical cyclone induced phytoplankton productivity is examined using a tropical cyclone version of the Coupled Ocean/Atmosphere Mesoscale Prediction System (COAMPS®). A four-component Nutrient–Phytoplankton–Detritus biological model...

  • Review
  • Open Access
717 Views
13 Pages

Liquid metals, particularly gallium-based alloys, uniquely combine fluidic compliance with metallic conductivity, which makes them ideal candidates for biomimetic design. Rather than treating biomimicry as the mere imitation of biological forms, we a...

(This article belongs to the Special Issue Liquid Metal Biomimicry: Toward Bio-Inspired Smart Materials)
  • Article
  • Open Access
8 Citations
3,551 Views
14 Pages

Effect of Long-Term Fertilization Practices on the Stability of Soil Organic Matter in the Northeast Black Soil Region in China

  • Yuxuan Ji,
  • Ying Zhao,
  • Xiaozeng Han,
  • Xu Chen and ,
  • Jun Yan,
  • Xinchun Lu,
  • Yuanchen Zhu and
  • Wenxiu Zou
  • + 3 authors+ 0 author

2 October 2024

Soil organic matter (SOM) is an important carbon pool in terrestrial ecosystems and plays a key role in soil functions. Nevertheless, the effects of fertilization practices on the physical, chemical, biological, and comprehensive stability of SOM are...

(This article belongs to the Section Soil and Plant Nutrition)
  • Article
  • Open Access
237 Citations
17,923 Views
32 Pages

Annotating Cancer Variants and Anti-Cancer Therapeutics in Reactome

  • Marija Milacic,
  • Robin Haw,
  • Karen Rothfels,
  • Guanming Wu and ,
  • David Croft,
  • Henning Hermjakob,
  • Peter D'Eustachio and
  • Lincoln Stein
  • + 3 authors+ 0 author

8 November 2012

Reactome describes biological pathways as chemical reactions that closely mirror the actual physical interactions that occur in the cell. Recent extensions of our data model accommodate the annotation of cancer and other disease processes. First, we...

  • Review
  • Open Access
2 Citations
1,188 Views
27 Pages

10 February 2026

Enzyme performance parameters, including the turnover number and specificity constant, exhibit remarkable diversity due to biological evolution and natural selection. In some bacterial and human enzymes, catalytic efficiencies approach fundamental ph...

(This article belongs to the Collection Latest Review Papers in Molecular Biophysics)
  • Article
  • Open Access
3 Citations
3,927 Views
6 Pages

Ecology, with its emphasis on coupled processes and massive heterogeneity, is not amenable to complete mechanical reduction, which is frustrated for reasons of history, dimensionality, logic, insufficiency, and contingency. Physical laws are not viol...

(This article belongs to the Special Issue Contemporary Natural Philosophy and Philosophies - part 1)
  • Article
  • Open Access
530 Views
20 Pages

Mechanistic simulation and machine learning are powerful but complementary tools: physics-based simulation is interpretable yet computationally expensive and blind to real-world context, whereas machine learning is fast but data-hungry and opaque. Bi...

(This article belongs to the Section Biomimetic Design, Constructions and Devices)
  • Technical Note
  • Open Access
9 Citations
7,525 Views
17 Pages

16 November 2016

Mitigating stream and river impairment is complex, particularly in mixed-land-use watersheds given the likelihood of integrated responses of stream restoration to coupled and ongoing terrestrial ecosystem disturbance and the need for periodic reasses...

  • Review
  • Open Access
940 Views
21 Pages

A Narrative Review of Psychological and Physical Rehabilitation in Infertility Treatment: Toward Holistic Outcomes Beyond Conception

  • Muhammad Adib Dwi Tamma Putra,
  • Muhammad Ayub Endratamma,
  • Muhammad Fadill Akbar,
  • Adila A. Hamid and
  • Mohd Helmy Mokhtar

11 July 2026

Infertility is a complex health issue that extends beyond biological mechanisms, encompassing significant psychological, relational, and social aspects. Advances in assisted reproductive technologies have improved the chances of conception, yet many...

(This article belongs to the Section Obstetrics and Gynecology)
  • Article
  • Open Access
6 Citations
3,488 Views
17 Pages

Estimating Nitrogen and Phosphorus Cycles in a Timber Reef Deployment Area

  • Jamaluddin Fitrah Alam,
  • Tamiji Yamamoto,
  • Tetsuya Umino,
  • Shinya Nakahara and
  • Kiyonori Hiraoka

9 September 2020

In an oligotrophic bay, Mitsu Bay, Japan, artificial timber reefs (ATRs) are deployed to increase fish production. In such man-made ecosystems, the biological activities of other organisms as well as the physical structures of ATRs could influence nu...

(This article belongs to the Special Issue Marine Biogeochemical Modeling)
  • Article
  • Open Access
3 Citations
14,865 Views
9 Pages

Evidence for Alteration in Chemical and Physical Properties of Water and Modulation of its Biological Functions by Sunlight Transmitted through Color Ranges of the Visible Spectrum-A Novel Study

  • Hari H. P. Cohly,
  • Asit Panja,
  • William L. Reno,
  • Don Obenhuber and ,
  • Margot S. Koelle,
  • Suman K. Das,
  • Michael F. Angel and
  • M. Rajeswara Rao
  • + 3 authors+ 0 author

We investigated the changes in the properties of water when exposed to sunlight for 40 days. We hypothesize and prove that solar irradiation to water entraps electromagnetic radiation as potential energy, which becomes kinetic energy in various syste...

  • Article
  • Open Access
1,515 Views
28 Pages

Many natural phenomena, such as physical, chemical, and biological processes, can be described using n-coupled nonlinearity anomalous subdiffusion systems. Furthermore, fractional differential equations are a useful tool for modeling practical proble...

  • Review
  • Open Access
47 Citations
5,860 Views
27 Pages

Integrated Technology for Cereal Bran Valorization: Perspectives for a Sustainable Industrial Approach

  • Silvia Amalia Nemes,
  • Lavinia Florina Călinoiu,
  • Francisc Vasile Dulf,
  • Anca Corina Fărcas and
  • Dan Cristian Vodnar

31 October 2022

Current research focuses on improving the bioaccessibility of functional components bound to cereal bran cell walls. The main bioactive components in cereal bran that have major biological activities include phenolic acids, biopeptides, dietary fiber...

(This article belongs to the Special Issue Antioxidant Activity of Fermented Foods and Food Microorganisms)
  • Article
  • Open Access
1 Citations
2,745 Views
21 Pages

31 March 2023

Physical modeling of the functioning of the adaptive immune system, which has been thoroughly characterized on genetic and molecular levels, provides a unique opportunity to define an adaptive, self-organizing biological system in its entirety. This...

(This article belongs to the Collection Feature Papers in Biophysics)
  • Article
  • Open Access
6 Citations
3,234 Views
12 Pages

20 June 2022

Floating treatment wetlands (FTWs) are widely used in surface water. The nutrient removal performance depends on both physical processes and chemical/biological transformations in FTWs. However, research describing the coupling processes of hydrodyna...

  • Perspective
  • Open Access
399 Views
26 Pages

18 May 2026

Understanding pathological processes remains challenging, because clinical descriptions still rely predominantly on phenotypic observations, while the underlying dynamical mechanisms that generate, maintain, and transform pathological conditions ofte...

(This article belongs to the Section Applied Physics General)
  • Article
  • Open Access
13 Citations
3,492 Views
16 Pages

9 August 2020

The normalization of dimensionless groups that rule the system of nonlinear coupled ordinary differential equations defined by the Lotka–Volterra biological or chemical oscillator has been derived in this work by applying a normalized nondimens...

(This article belongs to the Special Issue Analytical Approaches to Nonlinear Dynamical Systems and Applications)
  • Review
  • Open Access
990 Views
28 Pages

Per- and polyfluoroalkyl substances (PFASs) are persistent, surface-active contaminants for which soil represents the largest terrestrial reservoir. This review synthesizes a rapidly expanding but fragmented body of literature in order to reframe PFA...

  • Perspective
  • Open Access
3 Citations
4,027 Views
7 Pages

1 July 2022

Biosensing technologies are required for point-of-care testing (POCT). We determine some physical parameters such as molecular charge and mass, redox potential, and reflective index for measuring biological phenomena. Among such technologies, biologi...

(This article belongs to the Special Issue Field-Effect Sensors: From pH Sensing to Biosensing)
  • Article
  • Open Access
16 Citations
6,076 Views
20 Pages

A Hybrid Lagrangian–Eulerian Particle Model for Ecosystem Simulation

  • Pengfei Xue,
  • David J Schwab,
  • Xing Zhou,
  • Chenfu Huang and ,
  • Ryan Kibler and
  • Xinyu Ye
  • + 1 author+ 0 author

26 September 2018

Current numerical methods for simulating biophysical processes in aquatic environments are typically constructed in a grid-based Eulerian framework or as an individual-based model in a particle-based Lagrangian framework. Often, the biogeochemical pr...

(This article belongs to the Special Issue Selected Papers from the 15th Estuarine and Coastal Modeling Conference)
  • Article
  • Open Access
2 Citations
3,870 Views
10 Pages

4 October 2022

The synchronization of an ensemble of oscillators is a phenomenon present in systems of different fields, ranging from social to physical and biological systems. This phenomenon is often described mathematically by the Kuramoto model, which assumes o...

(This article belongs to the Topic Nonlinear Phenomena, Chaos, Control and Applications to Engineering and Science and Experimental Aspects of Complex Systems)
  • Review
  • Open Access
11 Citations
4,308 Views
33 Pages

4 September 2023

Solid-state NMR (ss-NMR) is a powerful tool to investigate noncrystallizable, poorly soluble molecular systems, such as membrane proteins, amyloids, and cell walls, in environments that closely resemble their physical sites of action. Rotational-echo...

(This article belongs to the Special Issue NMR Tools and Their Application for Structural Biology of Bioactive Proteins)
  • Review
  • Open Access
30 Citations
8,703 Views
13 Pages

8 September 2017

Concepts and techniques developed to investigate complex systems have found practical implications in the study of many complex physical, biological, and social phenomena. Social neuroscience is coherently moving to new investigation and analysis app...

  • Feature Paper
  • Review
  • Open Access
64 Citations
9,542 Views
39 Pages

Latest Developments in Membrane (Bio)Reactors

  • Arash Helmi and
  • Fausto Gallucci

2 October 2020

The integration of membranes inside a catalytic reactor is an intensification strategy to combine separation and reaction steps in one single physical unit. In this case, a selective removal or addition of a reactant or product will occur, which can...

(This article belongs to the Special Issue Catalysis in Membrane Reactors)
  • Feature Paper
  • Article
  • Open Access
12 Citations
4,383 Views
12 Pages

Electroporation Modelling of Irregular Nucleated Cells Including Pore Radius Dynamics

  • Michele Alessandro Chiapperino,
  • Pietro Bia,
  • Claudio Maria Lamacchia and
  • Luciano Mescia

4 December 2019

When high-amplitude, short-duration electric pulses are applied to cells the permeability of their membranes is increased. From the biological point of view, the phenomenon is quite well understood, however, it is important to develop accurate numeri...

(This article belongs to the Section Bioelectronics)
  • Article
  • Open Access
10 Citations
6,003 Views
30 Pages

13 July 2023

Evolutionary theory suggests that the origin, persistence, and evolution of biology is driven by the “natural selection” of characteristics improving the differential reproductive success of the organism in the given environment. The theo...

(This article belongs to the Special Issue Dissipative Structuring in Life)
  • Article
  • Open Access
1,062 Views
16 Pages

Numerical Simulation and Experimental Verification of Multi-Probe Cryoablation

  • Jian Zhang,
  • Bei Tong,
  • Changmao Ni,
  • Guoting Fu and ,
  • Binglei Pan and
  • Li Huang
  • + 1 author+ 0 author

25 November 2025

This paper addresses the challenges of ice ball shape prediction and layout optimization in multi-probe cryoablation treatment through a comprehensive study integrating both simulation and experimental approaches. A three-dimensional numerical model...

(This article belongs to the Section B: Biology and Biomedicine)
  • Article
  • Open Access
26 Citations
6,885 Views
33 Pages

The Role of the Substrate on the Mineralization Potential of Microbial Mats in A Modern Freshwater River (Paris Basin, France)

  • Adeline Roche,
  • Emmanuelle Vennin,
  • Irina Bundeleva,
  • Anthony Bouton and ,
  • Dahédrey Payandi-Rolland,
  • Philippe Amiotte-Suchet,
  • Eric C. Gaucher,
  • Hélène Courvoisier and
  • Pieter T. Visscher
  • + 4 authors+ 0 author

13 June 2019

The relationship between environmental conditions and the development, mineralization and preservation of modern tufa microbialites was investigated in a 1.1 km long freshwater stream in Villiers-le-Bâcle, a tributary of Mérantaise river...

(This article belongs to the Special Issue Microbialites: Preservation of Extant and Extinct Systems)
  • Review
  • Open Access
21 Citations
6,525 Views
43 Pages

Low-dimensional nanostructures have many advantages when used in sensors compared to the traditional bulk materials, in particular in their sensitivity and specificity. In such nanostructures, the motion of carriers can be confined from one, two, or...

(This article belongs to the Special Issue Nanomaterials-Based Sensors)
  • Article
  • Open Access
13 Citations
3,537 Views
17 Pages

Ultrabright Fluorescent Silica Nanoparticles for Dual pH and Temperature Measurements

  • Saquib Ahmed M. A. Peerzade,
  • Nadezhda Makarova and
  • Igor Sokolov

The mesoporous nature of silica nanoparticles provides a novel platform for the development of ultrabright fluorescent particles, which have organic molecular fluorescent dyes physically encapsulated inside the silica pores. The close proximity of th...

(This article belongs to the Special Issue Silica and Silicon Based Nanostructures)
  • Review
  • Open Access
42 Citations
9,875 Views
32 Pages

Carbon nanotubes (CNTs) possess unique mechanical, physical, electrical and absorbability properties coupled with their nanometer dimensional scale that renders them extremely valuable for applications in many fields including nanotechnology and chro...

(This article belongs to the Special Issue Frontiers in Chiral Nanomaterials)
  • Review
  • Open Access
1 Citations
972 Views
29 Pages

Review of Numerical Simulations for Parameter Control in Heap Bioleaching of Copper Sulfide Ore

  • Rong Nie,
  • Xinlong Yang,
  • Bingyang Tian,
  • Wenjuan Li and ,
  • Xue Liu,
  • Jiankang Wen and
  • Hongying Yang
  • + 2 authors+ 0 author

25 May 2026

Heap bioleaching is widely used to extract copper from low-grade sulfide ores thanks to its operational simplicity, low cost, and environmental sustainability. However, current control strategies rely primarily on single-factor optimization and often...

(This article belongs to the Special Issue Advances in the Theory and Technology of Biohydrometallurgy)
  • Article
  • Open Access
636 Views
19 Pages

Hydrodynamic Synchronization of Two Oscillators in a Newtonian Fluid

  • Tomé A. F. da Silva,
  • Brendon O. Pontes,
  • Elias S. Lima and
  • Rodrigo C. V. Coelho

29 May 2026

Particles moving in a fluid interact through the flow field they generate, which can lead to complex nonlinear dynamics. One important example is the synchronization of oscillatory motion in biological systems, such as the coordinated beating of cili...

(This article belongs to the Special Issue 10th Anniversary of Fluids—Recent Advances in Fluid Mechanics)
  • Review
  • Open Access
9 Citations
3,150 Views
39 Pages

13 February 2026

Bio-inspired engineering draws on principles refined by natural evolution to tackle persistent challenges in fluid mechanics, structural dynamics, and thermal transport. This article presents a critical, mechanism-driven narrative review that integra...

(This article belongs to the Section Biomimetic Surfaces and Interfaces)
  • Article
  • Open Access
376 Views
27 Pages

Numerical Investigation of Coupled-Attitude Aerodynamic Characteristics of a Frigatebird-Inspired Wing in Marine Atmospheric Updrafts

  • Yanru Chen,
  • Ran Liu,
  • Yanling Miao,
  • Guangyuan Liu and ,
  • Yang Tao and
  • Dawei Liu
  • + 1 author+ 0 author

1 September 2026

Frigatebirds achieve exceptional long-endurance flight by efficiently utilizing marine atmospheric updrafts, offering a valuable biological prototype for low-energy bionic aircraft. Most existing studies focus on uniform inflow and single-axis attitu...

(This article belongs to the Section Aeronautics)
  • Article
  • Open Access
13 Citations
3,053 Views
16 Pages

Hydrogen-like Plasmas under Endohedral Cavity

  • Saptarshi Chowdhury,
  • Neetik Mukherjee and
  • Amlan K. Roy

30 May 2023

Over the past few decades, confined quantum systems have emerged to be a subject of considerable importance in physical, chemical and biological sciences. Under such stressed conditions, they display many fascinating and notable physical and chemical...

(This article belongs to the Topic Theoretical, Quantum and Computational Chemistry)

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