Agronomy — Open Access Journal

Maize grain yield is considered to be highly associated with ear and leaf carbohydrate dynamics during the critical period bracketing silking and during the fast grain filling phase. However, a full understanding of how differences in N availability/plant N status influence carbohydrate dynamics and processes underlying yield formation remains elusive. Two field experiments were conducted to examine maize ear development, grain yield and the dynamics of carbohydrates in maize ear leaves and developing ears in response to differences in N availability. Increasing N availability stimulated ear growth during the critical two weeks bracketing silking and during the fast grain-filling phase, consequently resulting in greater maize grain yield. In ear leaves, sucrose and starch concentrations exhibited an obvious diurnal pattern at both silking and 20 days after silking, and N fertilization led to more carbon flux to sucrose biosynthesis than to starch accumulation. The elevated transcript abundance of key genes involved in starch biosynthesis and maltose export, as well as the sugar transporters (SWEETs) important for phloem loading, indicated greater starch turnover and sucrose export from leaves under N-fertilized conditions. In developing ears, N fertilization likely enhanced the cleavage of sucrose to glucose and fructose in the cob prior to and at silking and the synthesis from glucose and fructose to sucrose in the kernels after silking, and thus increasing kernel setting and filling. At the end, we propose a source-sink carbon partitioning framework to illustrates how N application influences carbon assimilation in leaves, transport, and conversions in developing reproductive tissues, ultimately leading to greater yield. Full article

Olive anthracnose is a very common and severe disease caused by diverse species of fungi belonging to Colletotrichumacutatum and Colletotrichumgloeosporioides complexes. To understand aspects of the Colletotrichum colonization and primary infection in olives, Colletotrichum spp. were isolated from the interior of 2-year stems, flower buds, and immature fruits of three important olive cultivars, Galega vulgar, Cobrançosa, and Azeiteira, from different sites within Alentejo, a major olive-producing region in Portugal. A total of 270 trees was sampled, and 68 Colletotrichum spp. isolates were obtained from 46 olive trees. DNA extraction and amplification of β-tubulinand GADPH genes through PCR revealed that the vast majority of the isolates showed high similarity to Colletotrichum nymphaeae, and only three isolates showed high similarity to Colletotrichumgodetiae. The highest number of Colletotrichum spp. isolates was detected in olive trees from Galega vulgar and in immature fruits. No significant differences in the number of Colletotrichum spp. isolates were found in trees from different sites. The highest percentages of infected immature fruits were obtained in trees that also presented a high percentage of 2-year stem infections, which may indicate that 2-year stems serve as important sources of inoculum, and the fungus may travel from the stems to other parts of the plant. Another indication of such possibility is that one isolate of C.nymphaeae (C.nymphaeae 2), characterized by a unique nucleotide mutation within the beta tubulin gene, was present in different organs of the same tree, both in 2-year stems and in recently formed vegetative organs as flower buds and immature fruits, which seem to suggest that it may be the same isolate, which has moved systemically inside the plant. The results presented here can play an important role in working out strategies for the effective and timely management of the disease and in reducing the number of unnecessary fungicide applications. Full article

Adoption of better management practices is crucial to lessen the impact of anthropogenic disturbances on tallgrass prairie systems that contribute heavily for livestock production in several states of the United States. This article reviews the impacts of different common management practices and disturbances (e.g., fertilization, grazing, burning) and tallgrass prairie restoration on plant growth and development, plant species composition, water and nutrient cycles, and microbial activities in tallgrass prairie. Although nitrogen (N) fertilization increases aboveground productivity of prairie systems, several factors greatly influence the range of stimulation across sites. For example, response to N fertilization was more evident on frequently or annually burnt sites (N limiting) than infrequently burnt and unburnt sites (light limiting). Frequent burning increased density of C₄ grasses and decreased plant species richness and diversity, while plant diversity was maximized under infrequent burning and grazing. Grazing increased diversity and richness of native plant species by reducing aboveground biomass of dominant grasses and increasing light availability for other species. Restored prairies showed lower levels of species richness and soil quality compared to native remnants. Infrequent burning, regular grazing, and additional inputs can promote species richness and soil quality in restored prairies. However, this literature review indicated that all prairie systems might not show similar responses to treatments as the response might be influenced by another treatment, timing of treatments, and duration of treatments (i.e., short-term vs. long-term). Thus, it is necessary to examine the long-term responses of tallgrass prairie systems to main and interacting effects of combination of management practices under diverse plant community and climatic conditions for a holistic assessment. Full article

The use of combinations of two or more genes controlling carbohydrate characters of corn is an attractive way to improve table quality of sweet corn. Poor seed quality of the inbred lines hinders the progress of this strategy for hybrid seed production. The objective of this study was to evaluate sweet corn inbred lines with combinations of double and triple recessive genes for germination percentage, seed vigor, total sugar content, and starch content. Eleven sweet corn genotypes including seven inbred lines (F₆ generation) with different combinations of genes controlling carbohydrate characters and four F₁ hybrids were used. The germination experiment was conducted under standard test between papers (BP) and accelerated aging (AA) test. The data were recorded for germination percentage, germination speed, normal and abnormal seedling, seedling length, and seedling dry weight. The seeds were analyzed for total sugar and starch content in endosperm at maturity stage. The results showed that single recessive genotype (sh2sh2) had high germination percentage and seedling vigor. The combinations of bt or sh2 gene with wx gene resulted in low germination percentage and poor seedling vigor. However, combinations of triple recessive genes (btbt sh2sh2 wxwx) had good germination in BP test but they performed poorly in AA test. Full article

Understanding spatial and temporal variability patterns of crop yield and their relationship with soil properties can provide decision support to optimize crop management. The objectives of this study were to (1) determine the spatial and temporal variability of cotton (Gossypium hirsutum L.) lint yield over different growing seasons; (2) evaluate the relationship between spatial and temporal yield patterns and apparent soil electrical conductivity (EC_a). This study was conducted in eight production fields, six with 50 ha and two with 25 ha, on the Southern High Plains (SHP) from 2000 to 2003. Cotton yield and EC_a data were collected using a yield monitor and an EC_a mapping system, respectively. The amount and pattern of spatial and temporal yield variability varied with the field. Fields with high variability in EC_a exhibited a stronger association between spatial and temporal yield patterns and EC_a, indicating that soil properties related to EC_a were major factors influencing yield variability. The application of EC_a for site-specific management is limited to fields with high spatial variability and with a strong association between yield spatial and temporal patterns and EC_a variation patterns. For fields with low variability in yield, spatial and temporal yield patterns might be more influenced by weather or other factors in different growing seasons. Fields with high spatial variability and a clear temporal stability pattern have great potential for long-term site-specific management of crop inputs. For unstable yield, however, long-term management practices are difficult to implement. For these fields with unstable yield patterns, within season site-specific management can be a better choice. Variable rate application of water, plant growth regulators, nitrogen, harvest aids may be implemented based on the spatial variability of crop growth conditions at specific times. Full article

The information on genotypic responses to the seasonal variation in the starch content, starch yield, and starch quality of cassava is limited. The objective of this research was to investigate the seasonal variation of starch characteristics of three cassava genotypes grown under irrigation. The experiment was conducted at four planting dates (20 April, 30 June, 5 October, and 15 December 2015). Three cassava genotypes (CMR38-125-77, Kasetsart 50, and Rayong 11) were evaluated in a randomized complete block design with four replications and the plants were harvested at 12 months. The planting date contributed the largest portion of the total variation in the starch content, starch yield, and starch granule size. The amylose content variability was heavily influenced by genotype. Cassava planted on 5 October or 15 December had greater starch content, starch yield, and starch granule in most genotypes. This was likely due to a higher temperature and solar radiation during the 3–9 months post-planting. CMR38-125-77 showed a consistently high starch content, starch yield, and high amylose content for most planting dates except for the starch yield on 20 April, of which Rayong 11 was the best. These findings will be useful for choosing suitable cassava genotypes for different growing seasons and for facilitating breeding efforts for high starch-yielding and high-quality cassava starch in the future. Full article

Kernel images of six wheat species were subjected to shape and color analyses to determine variations in the morphometric parameters of grain. The values of kernel shape descriptors (area, perimeter, Feret diameter, minimal Feret diameter, circularity, aspect ratio, roundness, solidity) and color descriptors (H, S, I and L*a*b*) were investigated. The influence of grain colonization by endophytic fungi on the color of the seed coat was also evaluated. Polish wheat grain was characterized by the highest intraspecific variation in shape and color. Bread wheat was most homogeneous in terms of the studied shape and color descriptors. An analysis of variations in wheat lines revealed greater differences in phenotypic traits of relict wheats, which have a larger gene pool. The grain of ancient wheat species was characterized by low roundness values and relatively low solidity. Shape and color descriptors were strongly discriminating components in the studied wheat species. Their discriminatory power was determined mainly by genotype. A method that supports rapid discrimination of cereal species and admixtures of other cereals in grain batches is required to guarantee the quality and safety of grain. The results of this study indicate that digital image analysis can be effectively used for this purpose. Full article

Bird damage to fruit is a long-standing challenge for growers that imposes significant costs because of yield losses and grower efforts to manage birds. We measured bird damage in ‘Bluecrop’ blueberry fields and Pinot noir vineyards in 2012–2014 in Michigan to investigate how year, grower, and forest cover influenced the proportions of bird damage. We tested whether inflatable tubemen (2013–2014) and a methyl anthranilate spray (2015) reduced bird damage in blueberries, and tested the deterrent effect of inflatable tubemen in grapes (2014). Years when crop yield was lower tended to have a higher damage percentage; for blueberries, bird damage was highest in 2012, and in grapes, damage was highest in 2012 and 2014. Neither blueberry fields nor vineyards with inflatable tubemen showed significantly reduced bird damage, although the blueberry fields showed a non-significant trend toward lower damage in the tubemen blocks. Blueberry field halves treated with the methyl anthranilate spray had equivalent bird damage to untreated halves. Our results correspond to previous work showing that percent bird damage varies by year, which was likely because bird consumption of fruit is relatively constant over time, while fruit yield varies. Fruit growers should expect a higher proportion of bird damage in low-fruit contexts, such as low-yield years, and prepare to invest more in bird management at those times. Investigating patterns of bird damage and testing deterrent strategies remain challenges. Bird activity is spatially and temporally variable, and birds’ mobility necessitates tests at large scales. Full article

This study investigated the impact of organically grown cereals on the level of free asparagine (Asn) with simultaneous consideration of grain yields and flour qualities over three growing seasons in Germany. Additionally, the relation of free Asn and acrylamide (AA) was investigated. By including free Asn results of a second trial site, heritability of the trait free Asn was calculated. Free Asn was significantly influenced by species and within species by cultivars. Rye showed the highest free Asn amount, followed by einkorn, emmer, wheat, and spelt. Replacing rye with spelt would reduce free Asn by 85%. Cultivars differed in free Asn by up to 67% (wheat), 55% (spelt), and 33% (rye). Year significantly influenced free Asn levels. Heritability was high for wheat and spelt concerning locations, but regarding years, heritability was low for wheat but high for spelt and rye. For organically grown cereals, the relation between free Asn and AA formation has never been investigated. Across species and years, a correlation of R² = 0.69 *** was found. Thus, free Asn can serve as an indicator for AA formation. In conclusion, the level of free Asn can be highly influenced by proper selection of species and cultivars. Full article

Recovery efficiency of nitrogen fertilizers has always been an important issue, especially for N fertilizer recommendation rate in cropping systems. Based on the equilibrium of N in the soil–plant system, apparent accumulated N fertilizer recovery (NRE_ac) was determined for long-term (15-years) experiments in wheat (Triticum aestivum L.) and maize (Zea mays L.) rotations at five field sites with various soils and climate characteristics in China. The result showed that the frequency of cropping and the content of soil clay affected NRE_ac positively and negatively, respectively. In the absence of nutrient deficiencies and other soil constraints (from NPK (nitrogen, phosphorus and potassium) in S2-CP (site2-Changping) in Beijing, S3-ZZ (site3-Zhengzhou) in Henan province and S4-YL (site4-Yangling) in Shaanxi province), NRE_ac had a narrow range from 70% to 78% with the highest average of 75% in wheat and maize cropping system. Meanwhile, the value 75% of NER_ac is a rational value proved by 3414 experiments. Additionally, the nitrate-N approach suggested that nitrate-N could be utilized by subsequent crops, the amount of which is calculated by the equation −1.23 × [(NO₃⁻-N) − 87]. Furthermore, another simpler and feasible method was proposed to maintain basic soil fertility while achieving a rational grain yield and maintaining a safe environmental upper threshold of nitrate. The present study provided a suit of methods for N fertilizer recommendations for the optimization of N applications in wheat and maize cropping system in China. Full article

The present study assesses the response of hybrid rice (variety Arize 6444) to potassium (K) application during rainy (wet) seasons of 2016 and 2017 in coastal saline soils of West Bengal, India. The study was conducted at the Regional Research Farm, Bidhan Chandra Krishi Viswavidyalaya, Kakdwip, West Bengal. The soil is clayeywith acidic pH (5.91), saline (Electrical conductivity/EC 1.53 dS m⁻¹⁾ and of high K fertility (366 kg ha⁻¹). The experimental plots were laid out in a randomized complete block design with five (5) K treatments (0, 30, 60, 90, and 120 kg K₂O ha⁻¹) with four replications. Plant height, dry matter (DM) in different plant parts, number of tillers, and grain yield were measured in each treatment for the determination of optimum K dose. The study revealed that the stem, leaf, and grain dry matter production at 60 days after transplanting (DAT) and harvest were significantly (p ≤ 0.05) higher at 90 kg K₂O ha⁻¹ application. The number of tillers hill⁻¹ was also higher (p ≤ 0.05) in plants fertilized with 90 kg K₂O ha⁻¹ over K omission. At harvest, grain K concentration improved (p ≤ 0.05) with K fertilization at 90 kg K₂O ha⁻¹, 116% more than the zero-K. Omission of K application from the best treatment (90 kg K₂O ha⁻¹) reduced grain yield by 3.5 t ha⁻¹ even though the available K content was high. Potassium uptake restriction due to higher Mg content in the soil may have caused reduced uptake of K leading to yield losses. The present study also showed higher profits with 90 kg K₂O ha⁻¹ with higher net returns (US$ 452 ha⁻¹) and benefit:cost ratio (1.75) over other treatments from hybrid rice (var. Arize 6444). From the regression equation, the economic optimum level of K (K_opt) was derived as 101.5 kg K₂O ha⁻¹ that could improve productivity of hybrid rice during the wet season in coastal saline soils of West Bengal. Full article

Crop modelling has the potential to contribute to global food and nutrition security. This paper briefly examines the history of crop modelling by international crop research centres of the CGIAR (formerly Consultative Group on International Agricultural Research but now known simply as CGIAR), whose primary focus is on less developed countries. Basic principles of crop modelling building up to a Genotype × Environment × Management × Socioeconomic (G × E × M × S) paradigm, are explained. Modelling has contributed to better understanding of crop performance and yield gaps, better prediction of pest and insect outbreaks, and improving the efficiency of crop management including irrigation systems and optimization of planting dates. New developments include, for example, use of remote sensed data and mobile phone technology linked to crop management decision support models, data sharing in the new era of big data, and the use of genomic selection and crop simulation models linked to environmental data to help make crop breeding decisions. Socio-economic applications include foresight analysis of agricultural systems under global change scenarios, and the consequences of potential food system shocks are also described. These approaches are discussed in this paper which also calls for closer collaboration among disciplines in order to better serve the crop research and development communities by providing model based recommendations ranging from policy development at the level of governmental agencies to direct crop management support for resource poor farmers. Full article

Development of high yielding and more palatable glutinous rice is an important goal in breeding and long-standing cultural interaction in Asia. In this study, the TGW6 and Wx, major genes conferring 1000 grain weight (GW) and amylose content (AC), were edited in a maintainer line by CRISPR/Cas9 technology. Four targets were assembled in pYLCRISPR/Cas9Pubi-H vector and T₀ mutant plants were obtained through Agrobacterium mediated transformation with 90% mutation frequency having 28% homozygous mutations without off-target effects in three most likely sites of each target and expression level of target genes in mutant lines was significantly decreased (P < 0.01), the GW and gel consistency (GC) were increased, and the AC and gelatinization temperature (GT) were decreased significantly and grain appearance was opaque, while there was no change in starch content (SC) and other agronomic traits. Mutations were inheritable and some T₁ plants were re-edited but T₂ generation was completely stable. The pollen fertility status was randomly distributed, and the mutant maintainer lines were hybridized with Cytoplasmic Male Sterile (CMS) line 209A and after subsequent backcrossing the two glutinous CMS lines were obtained in BC₂F₁. The identified proteins from anthers of CMS and maintainer line were closely associated with transcription, metabolism, signal transduction, and protein biosynthesis. Putative mitochondrial NAD⁺-dependent malic enzyme was absent in CMS line which caused the pollen sterility because of insufficient energy, while upregulation of putative acetyl-CoA synthetase and Isoamylase in both lines might have strong relationship with CMS and amylose content. High yielding glutinous CMS lines will facilitate hybrid rice breeding and investigations of proteins linked to male sterility will provide the insights to complicated metabolic network in anther development. Full article

A field experiment was conducted in Ninghe, Tianjin, China, using the ¹⁵N isotope method to determine the fate of N sources, application effect of organic fertilizer on the growth of rice plant organs, N uptake by rice, and N use efficiency. The experiment included eight treatments: CK-N (control + no-duck), CK-D (control + ducks), CF-N (chemical fertilizer + no-ducks), CF-D (chemical fertilizer + ducks), CM-N (chemical fertilizer + organic fertilizer + no-ducks), CM-D (chemical fertilizer + organic fertilizer + ducks), CD-N (chemical fertilizer 30% off + organic fertilizer + no-ducks), and CD-D (chemical fertilizer 30% off + organic fertilizer + ducks). The results showed that the application of organic fertilizer whether CM or CD in grain and leaf significantly increased N concentration; leaf and root P concentrations over control (CK) and chemical fertilizer (CF). In contrast, straw and root N concentrations, including grain and straw P concentrations did not show any difference between duck and no-duck treatment. Moreover, non-significant differences were found in ¹⁵N fresh grain and husk concentration. Both organs ranged from 14.2–14.4 g·kg⁻¹ and 6.2–6.3 g·kg⁻¹, respectively. Likewise, N uptake and N use efficiency in fresh grain and husk were not significantly differed within duck and without duck treatment. However, N uptake in fresh grain and husk ranged at the rates of 54.90–93.69 and 6.43–11.04 kg ha⁻¹ with duck and without duck treatment. N use efficiency in fresh grain and husk ranged from 21.55%–34.61% and 2.61%–4.24%, respectively. Overall organic fertilizer has a significant influence on rice growth and promotes crop productivity. Full article

This study sought to verify whether remote sensing offers the ability to efficiently delineate olive tree canopies using QuickBird (QB) satellite imagery. This paper compares four classification algorithms performed in pixel- and object-based analyses. To increase the spectral and spatial resolution of the standard QB image, three different pansharpened images were obtained based on variations in the weight of the red and near infrared bands. The results showed slight differences between classifiers. Maximum Likelihood algorithm yielded the highest results in pixel-based classifications with an average overall accuracy (OA) of 94.2%. In object-based analyses, Maximum Likelihood and Decision Tree classifiers offered the highest precisions with average OA of 95.3% and 96.6%, respectively. Between pixel- and object-based analyses no clear difference was observed, showing an increase of average OA values of approximately 1% for all classifiers except Decision Tree, which improved up to 4.5%. The alteration of the weight of different bands in the pansharpen process exhibited satisfactory results with a general performance improvement of up to 9% and 11% in pixel- and object-based analyses, respectively. Thus, object-based analyses with the DT algorithm and the pansharpened imagery with the near-infrared band altered would be highly recommended to obtain accurate maps for site-specific management. Full article

This study seeks to evaluate the response of 17 yellow Quality Protein Maize (QPM) inbred line seedlings to drought stress (DS), using different morphophysiological traits (plant height (PH), chlorophyll content (CC), stem diameter (SD), proline content (Pro), photochemical efficiency of photosystem II (PS II), canopy temperature (CT) and substomatal carbon dioxide concentration (Ci). The experiment was laid out in a randomized complete block design (RCBD) and replicated three times in a growth chamber. The seedlings were exposed to DS treatment by growing them at 20% field capacity. The control/well-watered (WW) treatments were kept at 80% field capacity throughout the experiment. Highly significant differences (p < 0.001) were observed for PH, SD, and Pro across environments. On the other hand, significant differences (p < 0.05) were observed for CC and PS II, while DS had no significant effects on Ci and CT. Proline content increased under DS compared to WW conditions. Inbred lines L34, L7, L5, L2, L16, and L6 had approximately equal or more Pro than the drought tolerant check (ZM1523). As such, these lines were regarded as drought tolerant. Taking all measured parameters into consideration, L7 performed notably better than the other inbred lines under DS. Full article

The genus Lolium has shown a high tendency to evolve resistance to herbicides. Considering the high level of allogamy of L. perenne and the importance of the wind as an agent for pollen dispersion, the aim of this work was to assess and quantify the effective glyphosate-resistant gene flow by pollen in L. perenne under field conditions. Pollen-mediated gene flow from glyphosate-resistant to -susceptible plants was studied using a donor–receptor design. The results indicate that the effective gene flow reached trap plants distanced ≤35 m downwind from the source of pollen. The progeny of receptor plants growing 0 m from the pollen donors showed 13% of individuals with low glyphosate sensitivity. This represents a seven-fold increase in the frequency of glyphosate-resistant individuals found in the progeny of plants isolated during the flowering period (negative control). Similarly, the progenies of plants grown at 15 and 25 m from the source of glyphosate resistance showed an increase in the frequency of resistant plants by about four- and two-fold, respectively. When the receptor plants were located at >35 m, no glyphosate-resistant plants were detected in their progenies. Management should aim for prevention or delay of flowering of glyphosate-resistant plants. Full article

Each year, 20%–40% of crops are lost due to plant pests and pathogens. Existing plant disease management relies predominantly on toxic pesticides that are potentially harmful to humans and the environment. Nanotechnology can offer advantages to pesticides, like reducing toxicity, improving the shelf-life, and increasing the solubility of poorly water-soluble pesticides, all of which could have positive environmental impacts. This review explores the two directions in which nanoparticles can be utilized for plant disease management: either as nanoparticles alone, acting as protectants; or as nanocarriers for insecticides, fungicides, herbicides, and RNA-interference molecules. Despite the several potential advantages associated with the use of nanoparticles, not many nanoparticle-based products have been commercialized for agricultural application. The scarcity of commercial applications could be explained by several factors, such as an insufficient number of field trials and underutilization of pest–crop host systems. In other industries, nanotechnology has progressed rapidly, and the only way to keep up with this advancement for agricultural applications is by understanding the fundamental questions of the research and addressing the scientific gaps to provide a rational and facilitate the development of commercial nanoproducts. Full article

In a two-year field trial, the effect of nitrogen (N) and sulfur (S) fertilization was investigated on grain yield, grain quality parameters, formation of acrylamide (AA), and the precursor free asparagine (Asn) in organically and conventionally produced winter wheat cultivars. In both production systems, different types, amounts, and temporal distributions of N were tested. The the effect of S fertilizer types and amounts on free Asn was only tested in the conventional farming system. Within both cropping systems, grain yield and baking quality were significantly influenced by N treatment while the effect on free Asn was only minor. Especially within the organic farming system, increasing N fertilization levels did not increase free Asn significantly. A slight trend of increasing free Asn levels with an intensified N supply was observed, especially in the presence of crude protein contents of 14% or higher. However, only N amounts of 180 kg N ha⁻¹ or higher increased the probability of high free Asn contents considerably, while N supply below that amount led to free Asn values similar to the unfertilized controls. The results indicated that good baking quality can be achieved without significantly increasing free Asn levels. In addition, cultivars affected the levels of free Asn significantly. Compared to cv. Bussard and Naturastar, cv. Capo exhibited the lowest AA formation potential at an N supply of 180 kg N ha⁻¹ while simultaneously reaching a crude protein content > 15% (conventional) and > 12% (organic). Thus, it seems that cultivars differ in their ability to store and incorporate free Asn into proteins. Over all trials, a relation of free Asn and AA was shown by R² = 0.77, while a relation of free Asn and protein was only R² = 0.36. Thus, lowering free Asn by adjusting N treatments should not necessarily affect baking quality. S fertilization within conventional farming did not change the free Asn amount or crude protein significantly, probably due to the fact that soil was not sulfate-deficient. In summary, it was evident that free Asn amounts in wheat varied widely both within cultivars and between cropping systems. In order to clearly unravel genotypic differences and their interaction with environmental factors and especially N fertilization, further research is needed. Full article