Agronomy

24 pages, 849 KiB

Open AccessReview

Recent Advances in the Remediation of Degraded and Contaminated Soils: A Review of Sustainable and Applied Strategies

by Viorica Ghisman, Alina Crina Muresan, Nicoleta Lucica Bogatu, Elena Emanuela Herbei and Daniela Laura Buruiana

Agronomy 2025, 15(8), 1920; https://doi.org/10.3390/agronomy15081920 (registering DOI) - 8 Aug 2025

Abstract

This review explores the pressing issue of soil degradation and contamination, highlighting their adverse environmental effects and the necessity for sustainable solutions. Soil degradation disrupts ecosystems and accelerates climate change, while soil contamination poses serious health risks to humans and wildlife. Recent advances [...] Read more.

This review explores the pressing issue of soil degradation and contamination, highlighting their adverse environmental effects and the necessity for sustainable solutions. Soil degradation disrupts ecosystems and accelerates climate change, while soil contamination poses serious health risks to humans and wildlife. Recent advances in mitigation strategies demonstrate promising solutions, focusing on both degradation and contamination. This paper presents innovative methods, including the utilization of a dolomite–sewage sludge mixture to combat soil degradation effectively, enhancing soil fertility and supporting ecosystem restoration. Additionally, it introduces a novel approach using a dolomite–stainless steel slag mixture for petroleum hydrocarbon absorption, showcasing its efficacy in remediating contaminated sites. The results indicate significant improvements in soil health and a reduction in environmental pollutants, underscoring the potential of these mixtures to revolutionize soil management practices. Implementing such strategies not only mitigates degradation and contamination but also contributes to the sustainability of agricultural and natural ecosystems. This article aims to provide a comprehensive overview of these advancements, offering insights for researchers, policymakers, and environmental practitioners striving to foster a healthier and more sustainable environment. Full article

(This article belongs to the Section Agroecology Innovation: Achieving System Resilience)

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16 pages, 1798 KiB

Open AccessArticle

Unraveling the NRAMP Gene Family: Aegilops tauschii’s Prominent Barrier Against Metal Stress

by Hongying Li, Yibo Li, Fuqiang Yang, Xiaolin Liang, Yifan Ding, Ning Wang and Xiaojiao Han

Agronomy 2025, 15(8), 1919; https://doi.org/10.3390/agronomy15081919 - 8 Aug 2025

Abstract

The natural resistance-associated macrophage proteins (NRAMPs) gene family represents a group of membrane transporter proteins with wide distribution in plants. This family of membrane transporters plays a pivotal role in mediating plant responses to metal stress by coordinating ion transport processes [...] Read more.

The natural resistance-associated macrophage proteins (NRAMPs) gene family represents a group of membrane transporter proteins with wide distribution in plants. This family of membrane transporters plays a pivotal role in mediating plant responses to metal stress by coordinating ion transport processes and maintaining cellular metal homeostasis, thereby effectively mitigating the detrimental effects of metal ion stress on plant growth and development. This study conducted a comprehensive genome-wide analysis of the NRAMP gene family in A. tauschii using integrated bioinformatics approaches, as well as the expression pattern when exposed to heavy metal-induced stress. By means of phylogenetic investigation, eleven AetNRAMP proteins were categorized into five distinct subgroups. Quantitative reverse transcription polymerase chain reaction (qRT-PCR) analysis revealed that the majority of NRAMP genes exhibited marked differential expression patterns under specific stress treatments. Subsequently, yeast cells were employed to validate the functions of AetNRAMP1 and AetNRAMP3. It was confirmed that AetNRAMP1 functioned in copper transport, and AetNRAMP3 showed an increase in its expression level under manganese stress. These findings establish a molecular foundation for elucidating the functional specialization of NRAMP gene family members in A. tauschii’s heavy metal detoxification pathways, providing critical genetic evidence for their stress-responsive regulatory networks. Nevertheless, significant knowledge gaps persist regarding its functions in A. tauschii. Research on metal stress resistance in this wheat progenitor species may establish a theoretical foundation for enhancing wheat tolerance and developing improved cultivars. Full article

(This article belongs to the Special Issue Physiological and Molecular Mechanisms of Plant Under the Abiotic Stress)

33 pages, 5299 KiB

Open AccessReview

The Effect of Polyploidisation on the Physiological Parameters, Biochemical Profile, and Tolerance to Abiotic and Biotic Stresses of Plants

by Marta Koziara-Ciupa and Anna Trojak-Goluch

Agronomy 2025, 15(8), 1918; https://doi.org/10.3390/agronomy15081918 - 8 Aug 2025

Abstract

Polyploidisation is a very common phenomenon in the plant kingdom and plays a key role in plant evolution and breeding. It promotes speciation and the extension of biodiversity. It is estimated that approximately 47% of flowering plant species are polyploids, derived from two [...] Read more.

Polyploidisation is a very common phenomenon in the plant kingdom and plays a key role in plant evolution and breeding. It promotes speciation and the extension of biodiversity. It is estimated that approximately 47% of flowering plant species are polyploids, derived from two or more diploid ancestral species. In natural populations, the predominant methods of whole-genome multiplication are somatic cell polyploidisation, meiotic cell polyploidisation, or endoreduplication. The formation and maintenance of polyploidy is accompanied by a series of epigenetic and gene expression changes, leading to alterations in the structural, physiological, and biochemical characteristics of polyploids relative to diploids. This article provides information on the mechanisms of formation of natural and synthetic polyploids. It presents a number of examples of the effects of polyploidisation on the composition and content of secondary metabolites of polyploids, providing evidence of the importance of the phenomenon in plant adaptation to the environment, improvement of wild species, and crops. It aims to gather and systematise knowledge on the effects of polyploidisation on plant physiological traits, including stomatal conductance (Gs), transpiration rate (Tr), light saturation point (LSP), as well as the most important photosynthetic parameters determining biomass accumulation. The text also presents the latest findings on the adaptation of polyploids to biotic and abiotic stresses and explains the basic mechanisms of epigenetic changes determining resistance to selected stress factors. Full article

(This article belongs to the Special Issue Stress Responses and Resistance Mechanisms in Plants: Physiology, Genetics, and Molecular Pathways)

23 pages, 1466 KiB

Open AccessArticle

Design and Optimization Experiment of a Cam-Swing Link Precision Metering Device for Peanut Based on Simulation

by Jinling Cong, Jiaming Wang, Yunlong Xie, Kaiqi Ouyang, Shisen Wu, Kun Cao and Lei Wang

Agronomy 2025, 15(8), 1917; https://doi.org/10.3390/agronomy15081917 - 8 Aug 2025

Abstract

To address the problem of unstable seed filling and low seeding accuracy caused by poor seed flow in conventional peanut seed metering devices, a novel precision metering device based on a cam-swing link was developed. Using EDEM simulations, the capacity of different type [...] Read more.

To address the problem of unstable seed filling and low seeding accuracy caused by poor seed flow in conventional peanut seed metering devices, a novel precision metering device based on a cam-swing link was developed. Using EDEM simulations, the capacity of different type hole installation positions to induce seed cluster disturbance was analyzed. A single-factor test and MBD–DEM coupled simulation were conducted to analyze the seeding performance. The simulation results indicate that when the type hole protrusion height was set to half the thickness of the seeding disc, seed cluster kinetic energy remained relatively stable, enhancing the capability to disturb seeds. As the seeding disc rotational speed increased from 10 to 40 rpm, the qualified index initially increased and then declined. Increasing the cluster wrap angle from 20° to 70° similarly led to a peak in the qualified index and a steady decrease in the missed index. Using the JPS-12 computer vision-based test platform, a second-order rotary orthogonal design was applied to evaluate the seeding performance. The experimental results show that when the seeding disc rotational speed was set at 26 rpm and the seed cluster wrap angle at 46°, the qualified index reached 89.95%, and the missed index was 4.04%. The average plant spacing of peanuts in field experiments was 137.82 mm. These results meet the operational requirements for precision peanut planting. Full article

(This article belongs to the Section Precision and Digital Agriculture)

17 pages, 4734 KiB

Open AccessArticle

Identification of Key Waterlogging-Tolerance Genes in Cultivated and Wild Soybeans via Integrated QTL–Transcriptome Analysis

by Yiran Sun, Lin Chen, Yuxin Jin, Shukun Wang, Shengnan Ma, Lin Yu, Chunshuang Tang, Yuying Ye, Mingxuan Li, Wenhui Zhou, Enshuang Chen, Xinru Kong, Jinbo Fu, Jinhui Wang, Qingshan Chen and Mingliang Yang

Agronomy 2025, 15(8), 1916; https://doi.org/10.3390/agronomy15081916 - 8 Aug 2025

Abstract

Soybean (Glycine max), as an important crop for both oil and grains, is a major source of high-quality plant proteins for humans. Among various natural disasters affecting soybean production, waterlogging is one of the key factors leading to yield reduction. It [...] Read more.

Soybean (Glycine max), as an important crop for both oil and grains, is a major source of high-quality plant proteins for humans. Among various natural disasters affecting soybean production, waterlogging is one of the key factors leading to yield reduction. It can cause root rot and seedling death, and in severe cases, even total crop failure. Given the significant differences in responses to waterlogging stress among different soybean varieties, traditional single-trait indicators are insufficient to comprehensively evaluate flood tolerance. In this study, relative seedling length (RSL) was used as a comprehensive evaluation index for flood tolerance. Using a chromosome segment substitution line (CSSL) population derived from SN14 and ZYD00006, we successfully identified seven quantitative trait loci (QTLs) associated with seed waterlogging tolerance. By integrating RNA-Seq transcriptome sequencing and phenotypic data, the functions of candidate genes were systematically verified. Phenotypic analysis indicated that Suinong14 had significantly better flood tolerance than ZYD00006. Further research revealed that the Glyma.05G160800 gene showed a significantly up-regulated expression pattern in Suinong14; qPCR analysis revealed that this gene exhibits higher expression levels in submergence-tolerant varieties. Haplotype analysis demonstrated a significant correlation between different haplotypes and phenotypic traits. The QTLs identified in this study can provide a theoretical basis for future molecular-assisted breeding of flood-tolerant varieties. Additionally, the functional study of Glyma.05G161800 in regulating seed flood tolerance can offer new insights into the molecular mechanism of seed flood tolerance. These findings could accelerate the development of submergence-tolerant rice varieties, enhancing crop productivity and stability in flood-prone regions. Full article

(This article belongs to the Section Crop Breeding and Genetics)

23 pages, 2872 KiB

Open AccessArticle

Study on Cherry Blossom Detection and Pollination Parameter Optimization Using the SMD-YOLO Model

by Longlong Ren, Yonghui Du, Yuqiang Li, Ang Gao, Wei Ma, Yuepeng Song and Xingchang Han

Agronomy 2025, 15(8), 1915; https://doi.org/10.3390/agronomy15081915 - 8 Aug 2025

Abstract

In response to the need for precise blossom identification and optimization of key operational parameters in intelligent cherry spraying pollination, the SMD-YOLO (You Only Look Once with spatial and channel reconstruction convolution, multi-scale channel attention, and dual convolution modules) cherry blossom detection model [...] Read more.

In response to the need for precise blossom identification and optimization of key operational parameters in intelligent cherry spraying pollination, the SMD-YOLO (You Only Look Once with spatial and channel reconstruction convolution, multi-scale channel attention, and dual convolution modules) cherry blossom detection model is proposed, along with a pollination experiment platform for parameter optimization. The SMD-YOLO model, built upon YOLOv11, enhances feature extraction through the ScConvC3k2 (spatial and channel reconstruction convolution C3k2) module, incorporates the MSCA (multi-scale channel attention) attention mechanism, and employs the DualConv module for a lightweight design, ensuring both detection accuracy and operational efficiency. Tested on a self-constructed cherry blossom dataset, the model delivered a precision of 87.6%, a recall rate of 86.1%, and an mAP(mean average precision) reaching 93.1% with a compact size of 4765 KB, 2.28 × 10⁶ parameters, a computational cost of 5.8 G, and a detection speed of 75.76 FPS, demonstrating strong practicality and potential for embedded real-time detection in edge devices, such as cherry pollination robots. To further enhance pollination effectiveness, a dedicated pollination experiment bench was designed, and a second-order orthogonal rotational combination experiment method was employed to systematically optimize three key parameters: spraying distance, spraying time, and liquid flow rate. Experimental results indicate that the optimal pollination effect occurs when the spraying distance is 3.4 cm, spraying time is 1.9 s, and liquid flow rate is 339 mL/min, with a deposition amount of 0.18 g and a coverage rate of 97.25%. This study provides a high-precision image detection algorithm and operational parameter optimization basis for intelligent and precise cherry blossom pollination. Full article

(This article belongs to the Special Issue Facility Agriculture Robots and Autonomous Unmanned Management for Crops)

15 pages, 2379 KiB

Open AccessArticle

QTL Mapping of Tomato Fruit Weight-Related Traits Using Solanum pimpinellifolium Introgression Lines

by Yuanhao Zhang, Fei Ding, Huiling Qui, Yingjie Tian, Fangling Jiang, Rong Zhou and Zhen Wu

Agronomy 2025, 15(8), 1914; https://doi.org/10.3390/agronomy15081914 - 8 Aug 2025

Abstract

As the primary harvested organ, fruit size and weight hold significant economic importance during tomato production. Therefore, elucidating the genetic mechanisms underlying fruit size and weight is of considerable agronomic value. In this study, the Solanum pimpinellifolium introgression lines were constructed with “LA2093” [...] Read more.

As the primary harvested organ, fruit size and weight hold significant economic importance during tomato production. Therefore, elucidating the genetic mechanisms underlying fruit size and weight is of considerable agronomic value. In this study, the Solanum pimpinellifolium introgression lines were constructed with “LA2093” as the donor and “Jina” as the recipient, and a genetic linkage map was constructed. Preliminary QTL mapping was conducted using four fruit-related traits: single fruit weight, fruit diameter, fruit length, and fruit shape index. A total of 10 QTLs were identified, including one for single fruit weight (qFw-3), five for fruit diameter (qFtd-3-1, qFtd-3-2, qFtd-4, qFtd-7, and qFtd-12), two for fruit length (qFl-3 and qFl-11), and two for fruit shape index (qFsi-2 and qFsi-3). To explore the key regulatory genes of the single fruit weight QTL qFw-3 locus, it was further finely mapped between SSR3-14 and C03M65101. The SSR3-14 and C03M65101 interval contained 57 genes on chromosome 3 (64.68–65.10 Mb) in the reference genome. Among these, eight genes, including Solyc03g114830, Solyc03g114870, Solyc03g114880, Solyc03g114890, Solyc03g114900, Solyc03g114910, Solyc03g115200, and Solyc03g115380, were identified as candidate genes involved in regulating fruit weight. These studies provide a basis for future functional validation of key regulatory genes and offer valuable genetic resources for the improvement of fruit size and weight during tomato breeding. Full article

(This article belongs to the Special Issue Genetics and Breeding of Field Crops in the 21st Century)

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18 pages, 12456 KiB

Open AccessArticle

Predicting the Global Distribution of Fusarium circinatum Using MaxEnt Modeling

by Xiaorui Zhang, Chao Chen, Fengqi Wang and Tingting Dai

Agronomy 2025, 15(8), 1913; https://doi.org/10.3390/agronomy15081913 - 8 Aug 2025

Abstract

Fusarium circinatum poses severe threats to agroforestry ecosystem as a globally significant pathogenic fungus. This study utilized multi-source species distribution data and environmental variables (climatic, topographic, and soil factors) to predict the global potential habitat suitability of F. circinatum and its response to [...] Read more.

Fusarium circinatum poses severe threats to agroforestry ecosystem as a globally significant pathogenic fungus. This study utilized multi-source species distribution data and environmental variables (climatic, topographic, and soil factors) to predict the global potential habitat suitability of F. circinatum and its response to future climate change using an optimized MaxEnt model (RM = 1, FC = LQ). The results indicate that the current total suitable area spans approximately 69.29 million km², with highly suitable habitats (>0.493) accounting for 15.07%, primarily concentrated in East Asia, southwestern North America, western South America, the Mediterranean coast, and eastern Australia. The distribution of F. circinatum’s suitable habitats is primarily constrained by the following environmental factors, ranked by contribution rate: coldest quarter precipitation (29.4%), coldest quarter mean temperature (18.2%), annual mean temperature (17.2%), and annual precipitation (12%). Under future climate scenarios, the suitable habitats exhibited an overall contraction and poleward shift, with the most significant decline in highly suitable areas observed under SSP370-2050s (−52.1%). The centroid of suitable habitats continuously migrated northwestward from Gombe State, Nigeria, with the maximum displacement reaching 1077.6 km by SSP585-2090s. This study reveals a latitude gradient redistribution pattern of F. circinatum driven by climate warming, providing a scientific basis for transboundary biosecurity and early warning systems. Full article

(This article belongs to the Section Pest and Disease Management)

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26 pages, 483 KiB

Open AccessReview

Engineering Crops for Enhanced Drought Stress Tolerance: A Strategy for Sustainable Agriculture

by Heriberto García-Coronado, Angel-Javier Ojeda-Contreras, Guillermo Berumen-Varela, Jesús-Martín Robles-Parra, Avtar K. Handa and Martín-Ernesto Tiznado-Hernández

Agronomy 2025, 15(8), 1912; https://doi.org/10.3390/agronomy15081912 - 8 Aug 2025

Abstract

Drought stress can reduce agricultural production, which is a challenge considering the food demand due to the increase in world population. To face this challenge, the design of plants with a phenotype of drought stress tolerance is needed. Conventional breeding has been widely [...] Read more.

Drought stress can reduce agricultural production, which is a challenge considering the food demand due to the increase in world population. To face this challenge, the design of plants with a phenotype of drought stress tolerance is needed. Conventional breeding has been widely used with this goal, but it requires considerable time and resources. Drought stress response and tolerance are complex issues influenced by numerous environmental and genotypic factors. In this review, experiments involving novel biotechnological tools to improve plant breeding are described and discussed. These experiments involve the use of techniques to accelerate breeding cycles and to enhance the selection of superior genotypes. Furthermore, experiments carried out to elucidate the molecular mechanism of drought stress tolerance and to engineer crops to achieve drought stress tolerance using recombinant DNA technology are described. The main traits associated with drought-tolerant genotypes and the response to drought stress at the morphological, physiological, metabolic, and biochemical levels are analyzed. To cope with the complexity of plant drought response, conventional breeding needs to be integrated with novel tools. It is hoped that this will help to achieve sustainable agriculture development; however, the implications of the use of these biotechnological tools, both alone and coupled, need to be analyzed. Full article

(This article belongs to the Special Issue Physiological, Biochemical, and Molecular Mechanisms of Abiotic Stress Tolerance in Fruits)

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5 pages, 163 KiB

Open AccessEditorial

Recent Advances in Legume Crop Protection

by Yu Gao, Zhaofeng Huang and Kai Li

Agronomy 2025, 15(8), 1911; https://doi.org/10.3390/agronomy15081911 - 8 Aug 2025

Abstract

The legume family is economically important and is one of the most important sources of starch, protein, oil, and vegetables for human food around the world, playing an irreplaceable role in guaranteeing human food security [...] Full article

(This article belongs to the Special Issue Recent Advances in Legume Crop Protection)

17 pages, 844 KiB

Open AccessReview

Progress of Acetylation Modification in Plants

by Ruiqi Li, Xuezhong Li, Ying He, Xiaoyuan Chen, Jing Li and Chuxiong Zhuang

Agronomy 2025, 15(8), 1910; https://doi.org/10.3390/agronomy15081910 - 8 Aug 2025

Abstract

Protein acetylation, a conserved post-translational modification, is collaboratively catalyzed by acetyltransferases and deacetylases and is widespread in plants. This study reviews recent research regarding two key types of acetylation: histone acetylation and non-histone acetylation. Histone acetylation, occurring primarily in the nucleus, regulates the [...] Read more.

Protein acetylation, a conserved post-translational modification, is collaboratively catalyzed by acetyltransferases and deacetylases and is widespread in plants. This study reviews recent research regarding two key types of acetylation: histone acetylation and non-histone acetylation. Histone acetylation, occurring primarily in the nucleus, regulates the structure of chromatin to control gene transcription on a large scale. This process is crucial for the precise regulation of the plant organ formation and development. Non-histone protein acetylation is widely distributed across various organelles and can finely regulate almost all key cellular processes and functions. Histone and non-histone acetylation work together to construct a complex and precise acetylation-modification regulatory network in plants. Finally, this study also analyzes current research challenges and prospects related to acetylation modifications. Elucidating the regulatory mechanisms of acetylation modifications in plants not only enables us to better understand the molecular mechanisms of plant growth and development but also provides a theoretical basis and potential targets for the genetic improvement and enhancement of stress resistance in crops, with significant scientific and practical value. Full article

(This article belongs to the Section Plant-Crop Biology and Biochemistry)

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14 pages, 4120 KiB

Open AccessArticle

DEM Parameter Calibration and Experimental Definition for White Tea Granular Systems

by Dapeng Ye, Yuxuan Gao, Yanlin Qi, Hao Wang, Renye Wu and Haiyong Weng

Agronomy 2025, 15(8), 1909; https://doi.org/10.3390/agronomy15081909 - 8 Aug 2025

Abstract

During automated packaging of white tea, uneven tea pile thickness leads to reduced weighing accuracy, while traditional experimental methods struggle to reveal the underlying particle flow mechanisms, hindering equipment optimization. Addressing the lack of discrete element method (DEM) parameters for Baihao Yinzhen tea, [...] Read more.

During automated packaging of white tea, uneven tea pile thickness leads to reduced weighing accuracy, while traditional experimental methods struggle to reveal the underlying particle flow mechanisms, hindering equipment optimization. Addressing the lack of discrete element method (DEM) parameters for Baihao Yinzhen tea, this study calibrates its DEM parameters based on the DEM approach, providing input for virtual commissioning of packaging machinery. Through physical experiments, the static friction coefficient (0.546), restitution coefficient (0.326), and rolling friction coefficient (0.133) between tea leaves and steel plates were determined. A three-dimensional DEM model of tea leaves was established using slicing techniques and the multi-sphere aggregation method. The steepest-ascent method and Box–Behnken design were employed to optimize the simulation parameters, resulting in the following optimal parameter combination: inter-particle restitution coefficient (0.16), static friction coefficient (0.14), and rolling friction coefficient (0.15). Validation simulations demonstrated that the mean angle of repose of tea leaves under the optimized parameter combination was 22.51°, with a relative error of only 1.29% compared to the actual experimental result of 22.80°. The calibrated parameters can be directly applied to the simulation of the feeding system in white tea automatic packaging machines, enabling optimization of vibration parameters through prediction of pile behavior, thereby reducing weighing errors. Full article

(This article belongs to the Section Precision and Digital Agriculture)

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15 pages, 2007 KiB

Open AccessArticle

Assessing the Regional Impacts of Climate Change on Grain Yield and Nitrogen Surplus in China (2000–2020)

by Hao Wang, Ziwei Yang, Hanting Chen, Jianjin Yang, Yueying Wei, Ziqun Wang, Huiqing Jiao, Gaofei Yin, Wenchao Li and Hongda Wen

Agronomy 2025, 15(8), 1908; https://doi.org/10.3390/agronomy15081908 - 8 Aug 2025

Abstract

Rising food demand and nitrogen pollution have posed key challenges under climate change. This study analyzed meteorological and grain yield data from 2000 to 2020 across seven regions in China. By integrating an economic–climate model with a nutrient balance approach, it examined the [...] Read more.

Rising food demand and nitrogen pollution have posed key challenges under climate change. This study analyzed meteorological and grain yield data from 2000 to 2020 across seven regions in China. By integrating an economic–climate model with a nutrient balance approach, it examined the effects of climate change on yields and nitrogen surplus. During the study period, average temperatures rose in all regions (0.73–1.49 °C), with more pronounced warming in northern areas. Rainfall trends varied regionally, from a decrease of 159.76 mm to an increase of 179.93 mm. Despite these climatic changes, national grain yields increased from 390 million tons in 2000 to 600 million tons in 2020, with temperature having a stronger influence on yield variation than rainfall. Nitrogen surplus showed regional differences, ranging from −236.50 kg·hm⁻² to 117.20 kg·hm⁻². In most areas, temperature and nitrogen surplus were negatively correlated. In contrast, rainfall had a weaker effect, with positive and negative coefficients close to zero. These results provide a basis for promoting green agricultural development in China. Full article

(This article belongs to the Section Soil and Plant Nutrition)

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17 pages, 2363 KiB

Open AccessArticle

The Duration of Rice–Crayfish Co-Culture System Usage Alters the Soil Aggregate Size, Distribution, and Organic Carbon Fractions in the Profile

by Changjie Zhang, Ting Yang, Jingru Wang, Yixin Tian, Jingjing Bai, Danrui Gao and Wei Fu

Agronomy 2025, 15(8), 1907; https://doi.org/10.3390/agronomy15081907 - 8 Aug 2025

Abstract

As an intensive eco-agricultural model, the rice–crayfish co-culture (RCC) system has been widely adopted in recent years due to its remarkable advantages in resource use, efficiency, and economic benefits. However, the long-term mechanisms by which this system affects the quantity and stability of [...] Read more.

As an intensive eco-agricultural model, the rice–crayfish co-culture (RCC) system has been widely adopted in recent years due to its remarkable advantages in resource use, efficiency, and economic benefits. However, the long-term mechanisms by which this system affects the quantity and stability of soil aggregate, as well as the vertical distribution of soil organic carbon (SOC) within aggregate across soil profiles, remain unclear. This study investigated the effects of varying duration (4 and 8 years) of RCC in Qianjiang City, Hubei Province. Soil samples were collected from six depth layers (0–10 cm, 10–20 cm, 20–30 cm, 30–40 cm, 40–80 cm, and 80–120 cm) to analyze the distribution characteristics of soil aggregate and SOC. The results demonstrated that, compared to the field which used RCC for a duration of 4 years, the field which used RCC for a duration of 8 years significantly reduced bulk density (BD) by 16.3% in the 40–80 cm layer. However, prolonged flooding has led to a 9.6% increase in the BD of the plow pan layer (10–20 cm) due to hydrostatic pressure and mechanical disturbances. Furthermore, the use of RCC for a duration of 8 years significantly enhanced the mass fractions of water-stable aggregates > 2 mm in the 0–80 cm soil layer at 0–10 cm (25.9%), 10–20 cm (30.2%), 20–30 cm (141.8%), 30–40 cm (172.4%), and 40–80 cm (112.9%), and improved aggregate stability throughout the entire soil profile. In terms of SOC distribution, the SOC concentration increased significantly with prolonged RCC usage across all soil layers, particularly in the 0–20 cm layer. The SOC was primarily derived from >2 mm (Large aggregate). Notably, although < 0.053 mm (Silt and clay) constituted a small proportion of the 0–20 cm layer, their SOC concentration reached 15.3–20.55 g kg⁻¹. Overall, extended RCC duration reduced BD in nearly all soil layers, promoted the formation of macro-aggregate, enhanced aggregate stability, and increased the SOC concentration within macro-aggregate, while strengthening the SOC stocks capacity of the 80–120 cm soil layer from 2.58 kg C m⁻² to 4.35 kg C m⁻², an increase of 68.6%. Full article

(This article belongs to the Special Issue Soil Organic Matter Contributes to Soil Health)

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1 pages, 137 KiB

Open AccessCorrection

Correction: Šařec et al. Digestate Application on Grassland: Effects of Application Method and Rate on GHG Emissions and Forage Performance. Agronomy 2025, 15, 1243

by Petr Šařec, Václav Novák, Oldřich Látal, Martin Dědina and Jaroslav Korba

Agronomy 2025, 15(8), 1906; https://doi.org/10.3390/agronomy15081906 - 8 Aug 2025

Abstract

In the published publication [...] Full article

(This article belongs to the Section Grassland and Pasture Science)

14 pages, 1993 KiB

Open AccessArticle

Supplementation of Calcium Through Seed Enrichment Technique Enhances Germinability and Early Growth of Timothy (Phleum pratense L.) Under Salinity Conditions

by Masahiro Akimoto and Li Ma

Agronomy 2025, 15(8), 1905; https://doi.org/10.3390/agronomy15081905 - 7 Aug 2025

Abstract

Calcium ameliorates salt-related growth defects in plants. The objective of this study was to determine whether supplying calcium through a seed enrichment technique enhances the germinability and early growth of timothy (Phleum pratense L.) under saline conditions. For seed enrichment, timothy seeds [...] Read more.

Calcium ameliorates salt-related growth defects in plants. The objective of this study was to determine whether supplying calcium through a seed enrichment technique enhances the germinability and early growth of timothy (Phleum pratense L.) under saline conditions. For seed enrichment, timothy seeds were soaked in CaCl₂ solutions at concentrations of 50 mM or 100 mM for 24 h at room temperature. Seeds treated with distilled water served as the control. Under distilled water conditions, germination rates among the seeds showed minimal variation, approximately 95% on average. However, in a 200 mM NaCl environment, the germination rate of the control seeds significantly decreased to 25%, while the germination rates of the Ca-enriched seeds remained high, exceeding 86%. Additionally, the Ca-enriched seeds germinated more quickly than the control seeds. When plants were grown with distilled water, the total dry matter weights did not differ significantly among the treatment types. However, under salt stress with 100 mM NaCl, the plants derived from Ca-enriched seeds thrived and exhibited higher dry matter weights compared to the control plants. The Ca-enriched seeds contained more soluble sugars and demonstrated higher catalase activity than the control seeds, and their corresponding plants accumulated less sodium under salt stress compared to the control plants. Seed enrichment is an effective technique for supplying calcium to timothy, and a concentration of 50 mM of CaCl₂ in the treatment solution is sufficient to achieve salt tolerance. Full article

(This article belongs to the Special Issue Responses of Forage Crops to Environmental Stresses and Stress Alleviating Strategies)

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20 pages, 2425 KiB

Open AccessArticle

Impact of Tillage System and Mineral Fertilization on Weed Suppression and Yield of Winter Wheat

by Felicia Chețan, Adrian Ioan Pop, Cornel Chețan, Ioan Gaga, Alina Șimon, Camelia Urdă, Alin Popa, Roxana Elena Călugăr, Teodor Rusu and Paula Ioana Moraru

Agronomy 2025, 15(8), 1904; https://doi.org/10.3390/agronomy15081904 - 7 Aug 2025

Abstract

This study, which began in the 2013/2014 agricultural year, aimed to assess the suitability of two soil tillage systems for wheat cultivation: conventional soil tillage (CS), which involved moldboard plowing to a depth of 28 cm followed by a single pass with a [...] Read more.

This study, which began in the 2013/2014 agricultural year, aimed to assess the suitability of two soil tillage systems for wheat cultivation: conventional soil tillage (CS), which involved moldboard plowing to a depth of 28 cm followed by a single pass with a rotary harrow to prepare the seedbed, and no-tillage (NT). It also sought to analyze the impacts of these systems on weed infestation levels and, consequently, on yield. A moderate level of fertilization was applied. The experimental field was established with a three-year crop rotation system: soybean–winter wheat–maize. The total number of weed species was 30 in CS, the representative species being Xanthium strumarium, and in NT there were 29 species, with Xanthium strumarium, Cirsium arvense, Bromus tectorum, and Agropyron repens predominating. There was an increase in the number of perennials (dicots and monocots). The total dry matter of weeds was 35.4 t ha⁻¹ in CS and 38.8 t ha⁻¹ in NT. After 11 agricultural years, it was found that there were no significant differences between the two soil tillage systems in terms of wheat yield (6.55 t ha⁻¹ in CS and 6.46 t ha⁻¹ in NT). The uneven rainfall negatively affected wheat growth and favored the spread of weeds, especially dicotyledonous ones. Full article

(This article belongs to the Special Issue Agroecological Strategies for Improving Nutritional Quality of Cereal Crops)

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17 pages, 1001 KiB

Open AccessArticle

A Preliminary Evaluation of the Use of Solid Residues from the Distillation of Medicinal and Aromatic Plants as Fertilizers in Mediterranean Soils

by Anastasia-Garyfallia Karagianni, Anastasia Paraschou and Theodora Matsi

Agronomy 2025, 15(8), 1903; https://doi.org/10.3390/agronomy15081903 - 7 Aug 2025

Abstract

The current study focuses on a preliminary evaluation of the use of solid residues produced from the distillation of selected medicinal and aromatic plants (MAP) as fertilizers for alkaline soils. Specifically, the residues of hemp (Cannabis sativa L.), helichrysum (Helichrysum Italicum [...] Read more.

The current study focuses on a preliminary evaluation of the use of solid residues produced from the distillation of selected medicinal and aromatic plants (MAP) as fertilizers for alkaline soils. Specifically, the residues of hemp (Cannabis sativa L.), helichrysum (Helichrysum Italicum (Roth) G. Don), lavender (Lavandula angustifolia Mill.), oregano (Origanum vulgare L.), rosemary (Rosmarinus officinalis L.) and sage (Salvia officinalis L.) were added in an alkaline and calcareous soil at the rates of 0 (control), 1, 2, 4 and 8%, in three replications (treatments), and the treated soils were analyzed. The results showed that upon application of the residues, soil electrical conductivity (EC), organic C, total N and the C/N ratio significantly increased, especially at the 4 and 8% rates. The same was found for soil available P, K, B, Cu and Mn. The effects of the residues on soil pH, cation exchange capacity (CEC) and available Zn and Fe were rather inconclusive, whereas soil available N significantly decreased, which was somewhat unexpected. From the different application rates tested, it seems that all residues could improve soil fertility (except N?) when they were applied to soil at rates of 2% and above, without exceeding the 8% rate. The reasons for the latter statement are soil EC and available Mn: the doubling of EC upon application of the residues and the excessive increase in soil available Mn in treatments with 8% residues raise concerns of soil salinization and Mn phytotoxicity risks, respectively. This work provides the first step towards the potential agronomic use of solid residues from MAP distillation in alkaline soils. However, for the establishment of such a perspective, further research is needed in respect to the effect of residues on plant growth and soil properties, by means of at least pot experiments. Based on the results of the current study, the undesirable effect of residues on soil available N should be investigated in depth, since N is the most important essential element for plant growth, and possible risks of micronutrient phytotoxicities should also be studied. In addition, application rates between 2 and 4% should be studied extensively in order to recommend optimum application rates of residues to producers. Full article

(This article belongs to the Section Soil and Plant Nutrition)

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19 pages, 4005 KiB

Open AccessArticle

Analysis of Temporal and Spatial Variations in Cropland Water-Use Efficiency and Influencing Factors in Xinjiang Based on the XGBoost–SHAP Model

by Qiu Zhao, Fan Gao, Bing He, Ying Li, Hairui Li, Yao Xiao and Ruzhang Lin

Agronomy 2025, 15(8), 1902; https://doi.org/10.3390/agronomy15081902 - 7 Aug 2025

Abstract

In arid regions with limited water resources, improving cropland water-use efficiency (WUEc) is crucial for maintaining crop production. This study aims to investigate how changes in meteorological and vegetation factors affect WUEc in drylands and to identify its primary drivers, which are essential [...] Read more.

In arid regions with limited water resources, improving cropland water-use efficiency (WUEc) is crucial for maintaining crop production. This study aims to investigate how changes in meteorological and vegetation factors affect WUEc in drylands and to identify its primary drivers, which are essential for understanding how cropland ecosystems respond to complex environmental changes. Using remote sensing data, we analyzed the spatiotemporal patterns of WUEc in Xinjiang from 2002 to 2022 by applying STL decomposition, Sen’s slope combined with the Mann–Kendall test, and an XGBoost–SHAP model, quantifying its key controlling factors. The results indicate that from 2002 to 2022, WUEc in Xinjiang showed an overall declining trend. Prior to 2007, WUEc increased at 0.05 gC·m⁻¹·m⁻²·a⁻¹, after which it fluctuated downward at −0.01 gC·m⁻¹·m⁻²·a⁻¹. Intra-annual peaks consistently occurred in May and during September–October. Spatially, WUEc exhibited significant heterogeneity, increasing from south to north, with 53.26% of the region showing declines. Temperature (T) and leaf area index (LAI) emerged as the primary meteorological and vegetation drivers, respectively, influencing WUEc change in 45.7% and 17.6% of the area. Both variables were negatively correlated with WUEc, with negative correlations covering 60% of the region for T and 83% for LAI. These findings provide scientific guidance for optimizing crop structure and water-resource management strategies in arid regions. Full article

(This article belongs to the Section Precision and Digital Agriculture)

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