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  • Article
  • Open Access
11 Citations
4,232 Views
19 Pages

The Histone H3K27 Demethylase REF6 Is a Positive Regulator of Light-Initiated Seed Germination in Arabidopsis

  • Yahan Wang,
  • Dachuan Gu,
  • Ling Deng,
  • Chunmei He,
  • Feng Zheng and
  • Xuncheng Liu

12 January 2023

Seed germination is the first step in initiating a new life cycle in seed plants. Light is a major environmental factor affecting seed germination. Phytochrome B (phyB) is the primary photoreceptor promoting germination during the initial phase of im...

(This article belongs to the Section Plant, Algae and Fungi Cell Biology)
  • Article
  • Open Access
17 Citations
5,247 Views
8 Pages

Elevation of Serum APE1/Ref-1 in Experimental Murine Myocarditis

  • Seon-Ah Jin,
  • Byung-Kwan Lim,
  • Hee Jung Seo,
  • Sun Kyeong Kim,
  • Kye Taek Ahn,
  • Byeong Hwa Jeon and
  • Jin-Ok Jeong

8 December 2017

Myocarditis is an inflammatory disease of the myocardium that causes cardiogenic shock and death. However, endomyocardial biopsy that is, the gold standard for a diagnosis is limited. Apurinic/apyrimidinic endonuclease 1/redox effector factor-1 (APE1...

(This article belongs to the Special Issue Oxidative Stress in Cardiovascular Disease 2018)
  • Article
  • Open Access
21 Citations
4,738 Views
16 Pages

Plasma APE1/Ref-1 Correlates with Atherosclerotic Inflammation in ApoE−/− Mice

  • Yu Ran Lee,
  • Hee Kyoung Joo,
  • Eun-Ok Lee,
  • Myoung Soo Park,
  • Hyun Sil Cho,
  • Sungmin Kim,
  • Hao Jin,
  • Jin-Ok Jeong,
  • Cuk-Seong Kim and
  • Byeong Hwa Jeon

Apurinic/apyrimidinic endonuclease 1/redox factor-1 (APE1/Ref-1) is involved in DNA base repair and reducing activity. However, the role of APE1/Ref-1 in atherosclerosis is unclear. Herein, we investigated the role of APE1/Ref-1 in atherosclerotic ap...

(This article belongs to the Special Issue Endothelial Dysfunction: From Pathophysiology to Novel Therapeutic Approaches)
  • Review
  • Open Access
16 Citations
5,251 Views
14 Pages

APE1/Ref-1 as a Therapeutic Target for Inflammatory Bowel Disease

  • Lauren Sahakian,
  • Ainsley M. Robinson,
  • Linda Sahakian,
  • Rhian Stavely,
  • Mark R. Kelley and
  • Kulmira Nurgali

24 October 2023

Inflammatory bowel disease (IBD) is characterized by chronic relapsing inflammation of the gastrointestinal tract. The prevalence of IBD is increasing with approximately 4.9 million cases reported worldwide. Current therapies are limited due to the s...

(This article belongs to the Special Issue Pathogenesis and Potential Treatments of Neurointestinal Diseases)
  • Article
  • Open Access
2 Citations
2,334 Views
20 Pages

Genome-Wide Identification and Expression Analysis of the REF Genes in 17 Species

  • Jinkai Fang,
  • Chi Ma,
  • Yu Lin,
  • Junjun Yin,
  • Lijuan Zhu,
  • Zhineng Yuan and
  • Dan Zhang

22 October 2024

Natural rubber production currently relies heavily on a single species, Hevea brasiliensis, underscoring the urgent need to identify alternative sources to alleviate the strain on natural rubber production. The rubber elongation factor (REF) and smal...

(This article belongs to the Section Molecular Plant Sciences)
  • Article
  • Open Access
14 Citations
5,244 Views
14 Pages

ATP Binding Cassette Transporter A1 is Involved in Extracellular Secretion of Acetylated APE1/Ref-1

  • Yu Ran Lee,
  • Hee Kyoung Joo,
  • Eun Ok Lee,
  • Hyun Sil Cho,
  • Sunga Choi,
  • Cuk-Seong Kim and
  • Byeong Hwa Jeon

Acetylation of nuclear apurinic/apyrimidinic endonuclease-1/redox factor-1 (APE1/Ref-1) is associated with its extracellular secretion, despite the lack of an N-terminal protein secretion signal. In this study, we investigated plasma membrane targeti...

(This article belongs to the Section Molecular Pathology, Diagnostics, and Therapeutics)
  • Article
  • Open Access
7 Citations
4,295 Views
12 Pages

APE1/Ref-1 Inhibits Adipogenic Transcription Factors during Adipocyte Differentiation in 3T3-L1 Cells

  • Eun-Ok Lee,
  • Hee-Kyoung Joo,
  • Yu-Ran Lee,
  • Sungmin Kim,
  • Kwon-Ho Lee,
  • Sang-Do Lee and
  • Byeong-Hwa Jeon

7 February 2023

Apurinic/apyrimidinic endonuclease 1/redox factor-1 (APE1/Ref-1) is a multifunctional protein involved in DNA repair and redox regulation. The redox activity of APE1/Ref-1 is involved in inflammatory responses and regulation of DNA binding of transcr...

(This article belongs to the Special Issue Advances in the Understanding of Adipose Tissue Biology and Energy Metabolism)
  • Article
  • Open Access
2 Citations
4,325 Views
19 Pages

Bis-Cinnamamide Derivatives as APE/Ref-1 Inhibitors for the Treatment of Human Melanoma

  • Razan Alhazmi,
  • Shirley Tong,
  • Shaban Darwish,
  • Elina Khanjani,
  • Bharti Khungar,
  • Swati Chawla,
  • Zhonghui Zheng,
  • Richard Chamberlin,
  • Keykavous Parang and
  • Sun Yang

21 April 2022

Human malignant melanoma exhibits imbalances in redox status, leading to activation of many redox-sensitive signaling pathways. APE/Ref-1 is a multifunctional protein that serves as a redox chaperone that regulates many nuclear transcription factors...

(This article belongs to the Special Issue Enzyme Inhibitors: Design, Synthesis and Biological Evaluation)
  • Article
  • Open Access
27 Citations
9,742 Views
14 Pages

APE1/Ref-1 Inhibits Phosphate-Induced Calcification and Osteoblastic Phenotype Changes in Vascular Smooth Muscle Cells

  • Ki Mo Lee,
  • Eun Ok Lee,
  • Yu Ran Lee,
  • Hee Kyoung Joo,
  • Myoung Soo Park,
  • Cuk-Seong Kim,
  • Sunga Choi,
  • Jin-Ok Jeong and
  • Byeong Hwa Jeon

25 September 2017

Vascular calcification plays a role in the pathogenesis of atherosclerosis, diabetes, and chronic kidney disease; however, the role of apurinic/apyrimidinic endonuclease 1/redox factor-1 (APE1/Ref-1) in inorganic phosphate (Pi)-induced vascular smoot...

(This article belongs to the Special Issue Oxidative Stress in Vascular Diseases)
  • Article
  • Open Access
6 Citations
2,721 Views
16 Pages

12 August 2022

The simultaneous regulation of cancer cells and inflammatory immune cells in the tumor microenvironment (TME) can be an effective strategy in treating aggressive breast cancer types, such as triple-negative breast cancer (TNBC). Apurinic/apyrimidinic...

(This article belongs to the Special Issue Inflammation and Tumor Progression: Signaling Pathways and Targeted Intervention)
  • Article
  • Open Access
11 Citations
5,072 Views
15 Pages

Identification of Novel Pathways Regulated by APE1/Ref-1 in Human Retinal Endothelial Cells

  • Mahmut Mijit,
  • Sheng Liu,
  • Kamakshi Sishtla,
  • Gabriella D. Hartman,
  • Jun Wan,
  • Timothy W. Corson and
  • Mark R. Kelley

APE1/Ref-1 (apurinic/apyrimidinic endonuclease 1, APE1 or APEX1; redox factor-1, Ref-1) is a dual-functional enzyme with crucial roles in DNA repair, reduction/oxidation (redox) signaling, and RNA processing and metabolism. The redox function of Ref-...

(This article belongs to the Special Issue 25th Anniversary of IJMS: Advances in Biochemistry)
  • Article
  • Open Access
12 Citations
2,914 Views
20 Pages

Genome-Wide Analysis of the SRPP/REF Gene Family in Taraxacum kok-saghyz Provides Insights into Its Expression Patterns in Response to Ethylene and Methyl Jasmonate Treatments

  • Huan He,
  • Jiayin Wang,
  • Zhuang Meng,
  • Paul P. Dijkwel,
  • Pingping Du,
  • Shandang Shi,
  • Yuxuan Dong,
  • Hongbin Li and
  • Quanliang Xie

Taraxacum kok-saghyz (TKS) is a model plant and a potential rubber-producing crop for the study of natural rubber (NR) biosynthesis. The precise analysis of the NR biosynthesis mechanism is an important theoretical basis for improving rubber yield. T...

(This article belongs to the Section Molecular Biology)
  • Article
  • Open Access
10 Citations
2,972 Views
26 Pages

15 August 2023

Among many indoor positioning technologies, pseudolite positioning technology has become an important supplement to GNSS. In indoor open environments, pseudolite positioning technology can usually perform high-precision positioning. However, in a com...

(This article belongs to the Special Issue Advanced Technologies for Position and Navigation under GNSS Signal Challenging or Denied Environments II)
  • Article
  • Open Access
1,389 Views
22 Pages

Reflexivity and Reciprocity in Two Arabic Varieties: Evidence for REF-REC Category

  • Abdulazeez Jaradat,
  • Dina Mahmoud Hammouri,
  • Muneir Gwasmeh and
  • Ahmad S. Haider

30 January 2026

Languages vary in expressing reflexivity and reciprocity. In some languages, reflexive and reciprocal constructions are formally identical, while in some other languages, they are distinct. The third group comprises languages that have non-reflexive...

  • Article
  • Open Access
1 Citations
1,265 Views
18 Pages

Synergistic Inhibition of Triple-Negative Breast Cancer by Acetylsalicylic Acid and Recombinant Human APE1/Ref-1 in a Mouse Xenograft Model

  • Hao Jin,
  • Yu Ran Lee,
  • Sungmin Kim,
  • Eunju Choi,
  • Ka-Young Lee,
  • Hee Kyoung Joo,
  • Eun-Ok Lee,
  • Cuk-Seong Kim,
  • Je Ryong Kim and
  • Byeong Hwa Jeon
  • + 1 author

12 November 2025

Background: Triple-negative breast cancer (TNBC) is a highly aggressive subtype with limited therapeutic options due to the lack of estrogen, progesterone, and HER2 receptors. This study investigated the synergistic anticancer effects of recombinant...

(This article belongs to the Special Issue Molecular Research in Breast Cancer)
  • Article
  • Open Access
9 Citations
1,844 Views
16 Pages

This study addresses challenges such as multi-scale defects, varying lighting, and irregular shapes by proposing an improved YOLOv10 model that integrates the ECA attention mechanism, RefConv feature enhancement module, and WIoU loss function for com...

  • Letter
  • Open Access
50 Citations
17,319 Views
20 Pages

Filovirus RefSeq Entries: Evaluation and Selection of Filovirus Type Variants, Type Sequences, and Names

  • Jens H. Kuhn,
  • Kristian G. Andersen,
  • Yīmíng Bào,
  • Sina Bavari,
  • Stephan Becker,
  • Richard S. Bennett,
  • Nicholas H. Bergman,
  • Olga Blinkova,
  • Steven Bradfute and
  • Stuart T. Nichol
  • + 66 authors

26 September 2014

Sequence determination of complete or coding-complete genomes of viruses is becoming common practice for supporting the work of epidemiologists, ecologists, virologists, and taxonomists. Sequencing duration and costs are rapidly decreasing, sequencin...

(This article belongs to the Collection Advances in Ebolavirus, Marburgvirus, and Cuevavirus Research)
  • Article
  • Open Access
3 Citations
3,482 Views
16 Pages

New Radical Cation Salts Based on BDH-TTP Donor: Two Stable Molecular Metals with a Magnetic [ReF6]2− Anion and a Semiconductor with a [ReO4]− Anion

  • Nataliya D. Kushch,
  • Gennady V. Shilov,
  • Lev I. Buravov,
  • Eduard B. Yagubskii,
  • Vladimir N. Zverev,
  • Enric Canadell and
  • Jun-ichi Yamada

Three radical cation salts of BDH-TTP with the paramagnetic [ReF6]2− and diamagnetic [ReO4]− anions have been synthesized: κ-(BDH-TTP)4ReF6 (1), κ-(BDH-TTP)4ReF6·4.8H2O (2) and pseudo-κ″-(BDH-TTP)3(ReO4)2 (3). The crystal and band structures, as well...

(This article belongs to the Special Issue Perspectives on Molecular Materials—A Tribute to Professor Peter Day)
  • Article
  • Open Access
6 Citations
4,425 Views
19 Pages

Drug Inhibition of Redox Factor-1 Restores Hypoxia-Driven Changes in Tuberous Sclerosis Complex 2 Deficient Cells

  • Jesse D. Champion,
  • Kayleigh M. Dodd,
  • Hilaire C. Lam,
  • Mohammad A. M. Alzahrani,
  • Sara Seifan,
  • Ellie Rad,
  • David Oliver Scourfield,
  • Melissa L. Fishel,
  • Brian L. Calver and
  • Andrew R. Tee
  • + 4 authors

15 December 2022

Therapies with the mechanistic target of rapamycin complex 1 (mTORC1) inhibitors are not fully curative for tuberous sclerosis complex (TSC) patients. Here, we propose that some mTORC1-independent disease facets of TSC involve signaling through redox...

(This article belongs to the Section Cancer Therapy)
  • Review
  • Open Access
23 Citations
5,402 Views
12 Pages

Endothelial dysfunction promotes vascular inflammation by inducing the production of reactive oxygen species and adhesion molecules. Vascular inflammation plays a key role in the pathogenesis of vascular diseases and atherosclerotic disorders. Howeve...

(This article belongs to the Special Issue Endothelial Dysfunction: From Pathophysiology to Novel Therapeutic Approaches)
  • Article
  • Open Access
514 Views
24 Pages

2 August 2026

Camouflaged object detection (COD) remains a challenging task because objects blend into the background, exhibiting low contrast, incomplete edges, and highly similar appearances. Recent deep learning methods have improved detection performance, but...

(This article belongs to the Special Issue Decentralized Intelligence for the Future Internet: Federated Learning, Edge AI, and Beyond)
  • Article
  • Open Access
3 Citations
2,112 Views
12 Pages

22 December 2024

Eccentric photorefractometry is widely used to measure eye refraction, accommodation, gaze position, and pupil size. While the individual calibration of refraction and accommodation data has been extensively studied, gaze measurements have received l...

(This article belongs to the Special Issue Advanced Optics and Photonics Technologies for Sensing Applications)
  • Article
  • Open Access
14 Citations
4,491 Views
21 Pages

30 March 2025

To address the challenge posed by the abundance of small objects with weak object features and little information in the images of underwater biomonitoring scenarios, and the added difficulty of recognizing these objects due to light absorption and s...

(This article belongs to the Special Issue Deep Learning for Object Detection)
  • Article
  • Open Access
2 Citations
2,270 Views
19 Pages

13 May 2025

This paper proposes a vibration reduction method for fractional slot concentrated winding (FSCW) permanent magnet synchronous motors (PMSMs) by applying a four-layer winding configuration. The radial electromagnetic force (REF), particularly its low...

(This article belongs to the Special Issue Advanced Modeling and Design of Vibration and Wave Systems)
  • Article
  • Open Access
14 Citations
4,466 Views
17 Pages

Syringic Acid Alleviates Cesium-Induced Growth Defect in Arabidopsis

  • Eri Adams,
  • Takae Miyazaki,
  • Ju Yeon Moon,
  • Yuji Sawada,
  • Muneo Sato,
  • Kiminori Toyooka,
  • Masami Yokota Hirai and
  • Ryoung Shin

30 November 2020

Syringic acid, a phenolic compound, serves a variety of beneficial functions in cells. Syringic acid increases in plants in response to cesium, and exogenous application of syringic acid resulted in a significant attenuation of cesium-induced growth...

(This article belongs to the Special Issue Ion Transport and Homeostasis in Plants)
  • Article
  • Open Access
19 Citations
4,889 Views
11 Pages

Metacognitive Beliefs and Suicidal Ideation: An Experience Sampling Study

  • Vikki Aadahl,
  • Adrian Wells,
  • Robert Hallard and
  • Daniel Pratt

The current study aimed to examine the relationship between metacognitive beliefs about suicidal ideation and the content and process of suicidal ideation. This was to examine the potential contribution of the Self-Regulatory Executive Function (S-RE...

(This article belongs to the Special Issue Understanding and Prevention of Suicide)
  • Article
  • Open Access
1 Citations
3,052 Views
11 Pages

Functional Analysis of the HbREF1 Promoter from Hevea brasiliensis and Its Response to Phytohormones

  • Lin-Tao Chen,
  • Dong Guo,
  • Jia-Hong Zhu,
  • Ying Wang,
  • Hui-Liang Li,
  • Feng An,
  • Yan-Qiong Tang and
  • Shi-Qing Peng

1 February 2024

The rubber elongation factor (REF) is the most abundant protein in the latex of Hevea brasiliensis, which is closely related to natural rubber biosynthesis. In order to gain a deeper understanding of the transcriptional regulation mechanism of HbREF1...

(This article belongs to the Special Issue Stress Resistance of Rubber Trees: From Genetics to Ecosystem)
  • Feature Paper
  • Article
  • Open Access
3 Citations
10,261 Views
17 Pages

The UK open access (OA) policy landscape simultaneously preferences Gold publishing models (Finch Report, RCUK, COAF) and Green OA through repository usage (HEFCE), creating the possibility of confusion and duplication of effort for academics and sup...

(This article belongs to the Special Issue Open Access and the Library)
  • Review
  • Open Access
28 Citations
9,097 Views
27 Pages

Inhibition of APE1/Ref-1 for Neovascular Eye Diseases: From Biology to Therapy

  • Gabriella D. Hartman,
  • Nathan A. Lambert-Cheatham,
  • Mark R. Kelley and
  • Timothy W. Corson

24 September 2021

Proliferative diabetic retinopathy (PDR), neovascular age-related macular degeneration (nvAMD), retinopathy of prematurity (ROP) and other eye diseases are characterized by retinal and/or choroidal neovascularization, ultimately causing vision loss i...

(This article belongs to the Special Issue Advances in Molecular Activity of Potential Drugs)
  • Article
  • Open Access
3,853 Views
19 Pages

Contactless Size Reference in Forensic Photography—Design and Verification of the Novel FreeRef-1 System

  • Luuk A. H. Schiks,
  • Maura Cook,
  • Laurentius R. Lipman,
  • Arjan P. van Dijke,
  • Kim Hutchinson,
  • Paul van den Hoven and
  • Arjo J. Loeve

7 April 2023

In photographs of evidence in forensic investigations, physical size references (e.g., rulers or stickers) are often placed next to a trace to allow us to take measurements from photos. However, this is laborious and introduces contamination risks. T...

(This article belongs to the Special Issue Advanced Analysis and Sensing at the (Crime) Scene or Location of Interest)
  • Article
  • Open Access
3 Citations
2,965 Views
11 Pages

Elevated APE1/Ref-1 Levels of Synovial Fluids in Patients with Rheumatoid Arthritis: Reflection of Disease Activity

  • In Seol Yoo,
  • Yu-Ran Lee,
  • Seong Wook Kang,
  • Jinhyun Kim,
  • Hee-Kyoung Joo,
  • Su-Jin Yoo,
  • Chan Keol Park,
  • Ha-Reum Lee,
  • Ji Ah Park and
  • Byeong-Hwa Jeon

16 November 2021

There is growing evidence that apurinic/apyrimidinic endonuclease 1/redox factor-1 (APE1/Ref-1) regulates inflammatory responses. Rheumatoid arthritis (RA) is an autoimmune disease, which is characterized with synovitis and joint destruction. Therefo...

(This article belongs to the Collection Systemic Manifestations and Complications of Rheumatoid Arthritis)
  • Article
  • Open Access
1 Citations
2,170 Views
10 Pages

Safety and Long-Term Outcomes of Rotablation in Patients with Reduced (<50%) Left Ventricular Ejection Fraction (rEF) (The Rota-REF Study)

  • Mohamed Ayoub,
  • Péter Tajti,
  • Ibrahim Akin,
  • Michael Behnes,
  • Tobias Schupp,
  • Jan Forner,
  • Hazem Omran,
  • Dirk Westermann,
  • Volker Rudolph and
  • Kambis Mashayekhi

30 August 2023

Clinical outcomes in patients with reduced left ventricular systolic function undergoing rotational atherectomy (RA) for percutaneous coronary intervention (PCI) remain understudied. Our study sought to evaluate the impact of RA-PCI in patients with...

(This article belongs to the Section Cardiology)
  • Article
  • Open Access
8 Citations
2,243 Views
16 Pages

24 February 2023

Lamiophlomis rotata (Benth.) Kudo is a perennial and unique medicinal plant of the Qinghai–Tibet Plateau. It has the effects of diminishing inflammation, activating blood circulation, removing blood stasis, reducing swelling, and relieving pain...

(This article belongs to the Special Issue Feature Papers in Technologies and Resources for Genetics)
  • Article
  • Open Access
7 Citations
3,979 Views
16 Pages

17β-Estradiol Increases APE1/Ref-1 Secretion in Vascular Endothelial Cells and Ovariectomized Mice: Involvement of Calcium-Dependent Exosome Pathway

  • Yu-Ran Lee,
  • Hee-Kyoung Joo,
  • Eun-Ok Lee,
  • Sungmin Kim,
  • Hao Jin,
  • Yeon-Hee Choi,
  • Cuk-Seong Kim and
  • Byeong-Hwa Jeon

Apurinic/apyrimidinic endonuclease-1/redox factor-1 (APE1/Ref-1) is a multifunctional protein that can be secreted, and recently suggested as new biomarker for vascular inflammation. However, the endogenous hormones for APE1/Ref-1 secretion and its u...

(This article belongs to the Special Issue Vascular Inflammation: From Target Molecules to Therapeutic Approaches)
  • Article
  • Open Access
1,715 Views
13 Pages

Screening and Validation of Stable Reference Genes for qRT-PCR Analysis in Epicauta gorhami (Coleoptera: Meloidae)

  • Guofeng Yang,
  • Xuetao Yu,
  • Yan Zhang,
  • Jinhua Luo,
  • Xiaofei Li,
  • Li Zhu,
  • Huanhuan Zhang,
  • Lin Jin,
  • Gang Wu and
  • Chenhui Shen
  • + 1 author

29 November 2024

Epicauta gorhami is a hypermetamorphic insect that mainly forage soybeans during the adult stage. However, the lack of appropriate references hinders our studying of the gene function in E. gorhami. In this study, referring to five computational tool...

(This article belongs to the Special Issue Research on Insect Molecular Biology)
  • Article
  • Open Access
2 Citations
2,483 Views
11 Pages

5 September 2022

Eichhornia crassipes is a notorious invasive aquatic weed, causing enormous ecological and economic losses worldwide. However, it has great potential in agriculture, industry, medical care, and other areas. While being such an important plant, it is...

  • Article
  • Open Access
33 Citations
5,144 Views
13 Pages

Selection of the Reference Gene for Expression Normalization in Papaver somniferum L. under Abiotic Stress and Hormone Treatment

  • Zhaoping Zhang,
  • Changjian Li,
  • Junqing Zhang,
  • Fang Chen,
  • Yongfu Gong,
  • Yanrong Li,
  • Yujie Su,
  • Yujie Wei and
  • Yucheng Zhao

23 January 2020

Papaver somniferum L. is an important medical plant that produces analgesic drugs used for the pain caused by cancers and surgeries. Recent studies have focused on the expression genes involved in analgesic drugs biosynthesis, and the real-time quant...

(This article belongs to the Section Plant Genetics and Genomics)
  • Article
  • Open Access
6 Citations
5,159 Views
16 Pages

Gene Expression Profile Analysis is Directly Affected by the Selected Reference Gene: The Case of Leaf-Cutting Atta Sexdens

  • Kalynka G. do Livramento,
  • Natália C. Freitas,
  • Wesley P. F. Máximo,
  • Ronald Zanetti and
  • Luciano V. Paiva

8 February 2018

Although several ant species are important targets for the development of molecular control strategies, only a few studies focus on identifying and validating reference genes for quantitative reverse transcription polymerase chain reaction (RT-qPCR)...

  • Article
  • Open Access
31 Citations
5,460 Views
22 Pages

Investigation into the Effects of Climate Change on Reference Evapotranspiration Using the HadCM3 and LARS-WG

  • Maryam Bayatvarkeshi,
  • Binqiao Zhang,
  • Rojin Fasihi,
  • Rana Muhammad Adnan,
  • Ozgur Kisi and
  • Xiaohui Yuan

1 March 2020

This study evaluates the effect of climate change on reference evapotranspiration (ET0), which is one of the most important variables in water resources management and irrigation scheduling. For this purpose, daily weather data of 30 Iranian weather...

(This article belongs to the Special Issue Effects of Climate Change on Water Resources)
  • Article
  • Open Access
2 Citations
1,640 Views
31 Pages

10 April 2025

Effective response to flood events requires high-resolution, frequently updated data on flooded areas for comprehensive flood risk assessments. Unmanned aerial vehicles (UAVs) equipped with conventional camera systems and classification based on orth...

(This article belongs to the Special Issue Application of Remote Sensing to Flood and Drought Analysis, Monitoring and Risk Management)
  • Article
  • Open Access
67 Citations
8,240 Views
19 Pages

Evaluation of Housekeeping Genes for Quantitative Real-Time PCR Analysis of Bradysia odoriphaga (Diptera: Sciaridae)

  • Caihua Shi,
  • Fengshan Yang,
  • Xun Zhu,
  • Erxia Du,
  • Yuting Yang,
  • Shaoli Wang,
  • Qingjun Wu and
  • Youjun Zhang

The soil insect Bradysia odoriphaga (Diptera: Sciaridae) causes substantial damage to Chinese chive. Suitable reference genes in B. odoriphaga (Bradysia odoriphaga) have yet to be identified for normalizing target gene expression among samples by qua...

(This article belongs to the Section Biochemistry)
  • Article
  • Open Access
437 Views
17 Pages

Selection and Validation of Stable Reference Genes for RT-qPCR in Diaphorencyrtus aligarhensis—A Predominant Parasitoid of Diaphorina citri

  • Xiaohang Gu,
  • Bingrui Luo,
  • Siyi Zhang,
  • Jialiang Chen,
  • Peiping Xu,
  • Shuang Li,
  • Baoli Qiu and
  • Lihe Zhang

Diaphorencyrtus aligarhensis parasitizes the Asian citrus psyllid (ACP), Diaphorina citri, the primary insect vector responsible for transmitting Huanglongbing (HLB), a severe citrus disease. Screening of appropriate reference genes is a critical pre...

(This article belongs to the Section Molecular Plant Sciences)
  • Feature Paper
  • Article
  • Open Access
495 Views
15 Pages

Reference Genes for Expression Analyses by RT-qPCR in Hyblaea puera (Lepidoptera: Hyblaeidae)

  • Xinan Li,
  • Ruiyang Qin,
  • Wen Zhang,
  • Fengfan Wang,
  • Ganyu Zhu,
  • Xiaopeng Wang,
  • Hengyu Zhang,
  • Menghui Liu,
  • Liangjian Qu and
  • Hao Yu

17 June 2026

Hyblaea puera is a major pest of teak and mangroves. Reliable RT-qPCR normalization requires stable reference genes, none of which have been validated in H. puera. In this study, we assessed the expression stability of ten candidate reference genes u...

(This article belongs to the Section Insect Molecular Biology and Genomics)
  • Article
  • Open Access
1 Citations
2,631 Views
31 Pages

Using Deep Learning for Predictive Maintenance: A Study on Exhaust Backpressure and Power Loss

  • Soulaimane Idiri,
  • Mohammed Said Boukhryss,
  • Abdellah Azmani,
  • Jabir El Aaraj and
  • Said Amghar

21 November 2025

This paper details the development of an embedded system for vehicle data acquisition using the On-Board Diagnostics version 2 (OBD2) protocol, with the objective of predicting power loss caused by exhaust gas backpressure (EBP). The system decodes a...

  • Article
  • Open Access
9 Citations
4,761 Views
14 Pages

3 February 2023

Lettuce is a popular vegetable source of bioactive compounds, like anthocyanins, powerful antioxidants present in red and semi-red varieties. Selection of reliable reference genes (RGs) for the normalization of real-time quantitative PCR (qPCR) data...

(This article belongs to the Section Molecular Plant Sciences)
  • Article
  • Open Access
12 Citations
7,050 Views
31 Pages

29 March 2021

This paper gives formal foundations and evidence from gene science in the post Barbara McClintock era that the Gödel Sentence, far from being an esoteric construction in mathematical logic, is ubiquitous in genomic intelligence that evolved with mult...

(This article belongs to the Special Issue New Advances in Biocomplexity)
  • Article
  • Open Access
35 Citations
6,396 Views
16 Pages

Monitoring antibiotic resistance genes (ARGs) across ecological niches is critical for assessing the impacts distinct microbial communities have on the global spread of resistance. In permafrost-associated soils, climate and human driven disturbances...

(This article belongs to the Special Issue Antimicrobial Resistance: From the Environment to Human Health)
  • Article
  • Open Access
22 Citations
10,967 Views
18 Pages

WhiteRef: A New Tower-Based Hyperspectral System for Continuous Reflectance Measurements

  • Karolina Sakowska,
  • Damiano Gianelle,
  • Alessandro Zaldei,
  • Alasdair MacArthur,
  • Federico Carotenuto,
  • Franco Miglietta,
  • Roberto Zampedri,
  • Mauro Cavagna and
  • Loris Vescovo

8 January 2015

Proximal sensing is fundamental to monitor the spatial and seasonal dynamics of ecosystems and can be considered as a crucial validation tool to upscale in situ observations to the satellite level. Linking hyperspectral remote sensing with carbon flu...

(This article belongs to the Special Issue State-of-the-Art Sensors Technology in Italy 2014)
  • Article
  • Open Access
2 Citations
2,581 Views
13 Pages

Changes in the Plasma Apurinic/Apyrimidinic Endonuclease 1/Redox Factor-1(APE1/Ref-1) Level during Cancer Surgery: An Observational Study

  • Yumin Jo,
  • Yeojung Kim,
  • Eunhye Park,
  • Yuran Lee,
  • Jiyeon Kim,
  • Minwoong Kang,
  • Jaesung Lim,
  • Insang Song,
  • Chaeseong Lim and
  • Byeonghwa Jeon

21 November 2021

Background and Objectives: Propofol-based total intravenous anesthesia (TIVA) is presumed to have more favorable effects on the prognosis of patients with cancer compared with volatile inhaled anesthesia (VIA). We hypothesized that these anesthetics...

  • Article
  • Open Access
40 Citations
8,328 Views
14 Pages

Comparative Proteomics of Rubber Latex Revealed Multiple Protein Species of REF/SRPP Family Respond Diversely to Ethylene Stimulation among Different Rubber Tree Clones

  • Zheng Tong,
  • Dan Wang,
  • Yong Sun,
  • Qian Yang,
  • Xueru Meng,
  • Limin Wang,
  • Weiqiang Feng,
  • Ling Li,
  • Eve Syrkin Wurtele and
  • Xuchu Wang

Rubber elongation factor (REF) and small rubber particle protein (SRPP) are two key factors for natural rubber biosynthesis. To further understand the roles of these proteins in rubber formation, six different genes for latex abundant REF or SRPP pro...

(This article belongs to the Special Issue Selected Papers from the 6th National Plant Protein Research Congress)

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