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353 Results Found

  • Feature Paper
  • Review
  • Open Access
26 Citations
10,114 Views
20 Pages

27 September 2021

Optical methods of super-resolution microscopy, such as confocal microscopy, structured illumination, nonlinear microscopy, and image scanning microscopy are reviewed. These methods avoid strong invasive interaction with a sample, allowing the observ...

  • Review
  • Open Access
13 Citations
4,052 Views
21 Pages

17 January 2023

Conventional fluorescence microscopy is limited by the optical diffraction of light, which results in a spatial resolution of about half of the light’s wavelength, approximately to 250–300 nm. The spatial resolution restricts the utilizat...

  • Review
  • Open Access
15 Citations
3,972 Views
16 Pages

22 April 2022

We recently assisted in a revolution in the realm of fluorescence microscopy triggered by the advent of super-resolution techniques that surpass the classic diffraction limit barrier. By providing optical images with nanometer resolution in the far f...

  • Feature Paper
  • Review
  • Open Access
4 Citations
4,757 Views
22 Pages

Drosophila Models Rediscovered with Super-Resolution Microscopy

  • Szilárd Szikora,
  • Péter Görög,
  • Csaba Kozma and
  • József Mihály

29 July 2021

With the advent of super-resolution microscopy, we gained a powerful toolbox to bridge the gap between the cellular- and molecular-level analysis of living organisms. Although nanoscopy is broadly applicable, classical model organisms, such as fruit...

  • Article
  • Open Access
8 Citations
3,845 Views
13 Pages

Super-resolution structured illumination microscopy (SR-SIM) is an optical fluorescence microscopy method which is suitable for imaging a wide variety of cells and tissues in biological and biomedical research. Typically, SIM methods use high spatial...

  • Review
  • Open Access
64 Citations
21,400 Views
14 Pages

DNA-Based Super-Resolution Microscopy: DNA-PAINT

  • Daniel J. Nieves,
  • Katharina Gaus and
  • Matthew A. B. Baker

11 December 2018

Super-resolution microscopies, such as single molecule localization microscopy (SMLM), allow the visualization of biomolecules at the nanoscale. The requirement to observe molecules multiple times during an acquisition has pushed the field to explore...

  • Article
  • Open Access
3 Citations
3,246 Views
11 Pages

To overcome the diffraction limit and resolve target structures in greater detail, far-field super-resolution techniques such as stochastic optical reconstruction microscopy (STORM) have been developed, and different STORM algorithms have been develo...

  • Review
  • Open Access
10 Citations
8,207 Views
19 Pages

Blood Cell Analysis: From Traditional Methods to Super-Resolution Microscopy

  • Zexu Tian,
  • Yongchang Wei,
  • Yalan Yu,
  • Fuling Zhou and
  • Zhen-Li Huang

Blood cell analysis is essential for the diagnosis and identification of hematological malignancies. The use of digital microscopy systems has been extended in clinical laboratories. Super-resolution microscopy (SRM) has attracted wide attention in t...

  • Review
  • Open Access
1 Citations
4,240 Views
17 Pages

Far-Field Super-Resolution Microscopy Using Evanescent Illumination: A Review

  • Qianwei Zhang,
  • Haonan Zhang,
  • Xiaoyu Yang,
  • Xu Liu,
  • Mingwei Tang and
  • Qing Yang

The resolution of conventional optical microscopy is restricted by the diffraction limit. Light waves containing higher-frequency information about the sample are bound to the sample surface and cannot be collected by far-field optical microscopy. To...

  • Review
  • Open Access
12 Citations
5,677 Views
16 Pages

Super-Resolution Microscopy to Study Interorganelle Contact Sites

  • Jon Ander Nieto-Garai,
  • June Olazar-Intxausti,
  • Itxaso Anso,
  • Maier Lorizate,
  • Oihana Terrones and
  • Francesc-Xabier Contreras

5 December 2022

Interorganelle membrane contact sites (MCS) are areas of close vicinity between the membranes of two organelles that are maintained by protein tethers. Recently, a significant research effort has been made to study MCS, as they are implicated in a wi...

  • Article
  • Open Access
13 Citations
3,870 Views
12 Pages

Super-Resolution Live Cell Microscopy of Membrane-Proximal Fluorophores

  • Verena Richter,
  • Peter Lanzerstorfer,
  • Julian Weghuber and
  • Herbert Schneckenburger

26 September 2020

Here, we present a simple and robust experimental setup for the super-resolution live cell microscopy of membrane-proximal fluorophores, which is comparably easy to perform and to implement. The method is based on Structured Illumination Microscopy (...

  • Article
  • Open Access
19 Citations
8,924 Views
9 Pages

6 February 2018

Lignocellulosic biomass is a complex network of polymers making up the cell walls of plants. It represents a feedstock of sustainable resources to be converted into fuels, chemicals, and materials. Because of its complex architecture, lignocellulose...

  • Review
  • Open Access
12 Citations
6,718 Views
20 Pages

2 February 2021

With an estimated three to five million human cases annually and the potential to infect domestic and wild animal populations, influenza viruses are one of the greatest health and economic burdens to our society, and pose an ongoing threat of large-s...

  • Review
  • Open Access
2,519 Views
17 Pages

Super-resolution microscopy (SRM) has revolutionized our understanding of subcellular structures, including cell organelles and viruses. For human immunodeficiency virus (HIV), SRM has significantly advanced knowledge of viral structural biology and...

  • Review
  • Open Access
2 Citations
4,763 Views
17 Pages

On the Advent of Super-Resolution Microscopy in the Realm of Polycomb Proteins

  • Irene Nepita,
  • Simonluca Piazza,
  • Martina Ruglioni,
  • Sofia Cristiani,
  • Emanuele Bosurgi,
  • Tiziano Salvadori,
  • Giuseppe Vicidomini,
  • Alberto Diaspro,
  • Marco Castello and
  • Ranieri Bizzarri
  • + 3 authors

26 February 2023

The genomes of metazoans are organized at multiple spatial scales, ranging from the double helix of DNA to whole chromosomes. The intermediate genomic scale of kilobases to megabases, which corresponds to the 50–300 nm spatial scale, is particu...

  • Review
  • Open Access
4 Citations
3,689 Views
24 Pages

26 October 2024

Molecular assembly is promising in the construction of advanced materials, obtaining structures with specific functions. In-depth investigation of the relationships between the formation, dynamics, structure, and functionality of the specific molecul...

  • Article
  • Open Access
6 Citations
3,641 Views
14 Pages

Quantitative Super-Resolution Microscopy to Assess Adhesion of Neuronal Cells on Single-Layer Graphene Substrates

  • Silvia Scalisi,
  • Francesca Pennacchietti,
  • Sandeep Keshavan,
  • Nathan D. Derr,
  • Alberto Diaspro,
  • Dario Pisignano,
  • Agnieszka Pierzynska-Mach,
  • Silvia Dante and
  • Francesca Cella Zanacchi

15 November 2021

Single Layer Graphene (SLG) has emerged as a critically important nanomaterial due to its unique optical and electrical properties and has become a potential candidate for biomedical applications, biosensors, and tissue engineering. Due to its intrin...

  • Article
  • Open Access
5 Citations
3,263 Views
11 Pages

Full-Field Super-Resolution Terahertz Imaging Based on Rotating Coherent Scattering Microscopy

  • Duoxuan Ma,
  • Jie Zhao,
  • Dayong Wang,
  • Hao Lin,
  • Lu Rong,
  • Yunxin Wang and
  • Shufeng Lin

11 January 2023

For decades, terahertz (THz) microscopic imaging has been limited by the resolution of the system due to the larger wavelength, the power of the source, and the equivalent noise power of the detector, so a lot of research has focused on single-point...

  • Article
  • Open Access
1 Citations
3,841 Views
12 Pages

ResShift-4E: Improved Diffusion Model for Super-Resolution with Microscopy Images

  • Depeng Gao,
  • Ying Gong,
  • Jingzhuo Cao,
  • Bingshu Wang,
  • Han Zhang,
  • Jiangkai Dong and
  • Jianlin Qiu

Blind super-resolution algorithms based on diffusion models still face significant challenges at the current stage, including high computational cost, long inference time, and limited cross domain generalization ability. This paper aims to apply supe...

  • Article
  • Open Access
15 Citations
12,998 Views
15 Pages

26 June 2015

We present a novel experimental setup in which magnetic and optical tweezers are combined for torque and force transduction onto single filamentous molecules in a transverse configuration to allow simultaneous mechanical measurement and manipulation....

  • Article
  • Open Access
1 Citations
1,468 Views
16 Pages

The purpose of this study was to propose a deep learning-based model for the super-resolution reconstruction of stained light microscopy images. To achieve this, perceptual loss was applied to the generator to reflect multichannel signal intensity, d...

  • Article
  • Open Access
918 Views
14 Pages

19 November 2025

Accurate and label-free quantitative phase imaging (QPI) plays a crucial role in advancing diagnostic techniques that streamline histology and diagnostic procedures by minimizing sample preparation time, resources, and requirements. Although Digital...

  • Article
  • Open Access
43 Citations
10,669 Views
21 Pages

Challenges for Super-Resolution Localization Microscopy and Biomolecular Fluorescent Nano-Probing in Cancer Research

  • Michael Hausmann,
  • Nataša Ilić,
  • Götz Pilarczyk,
  • Jin-Ho Lee,
  • Abiramy Logeswaran,
  • Aurora Paola Borroni,
  • Matthias Krufczik,
  • Franziska Theda,
  • Nadine Waltrich and
  • Michael Blank
  • + 3 authors

28 September 2017

Understanding molecular interactions and regulatory mechanisms in tumor initiation, progression, and treatment response are key requirements towards advanced cancer diagnosis and novel treatment procedures in personalized medicine. Beyond decoding th...

  • Article
  • Open Access
9 Citations
3,315 Views
14 Pages

Beyond the Limits of Light: An Application of Super-Resolution Confocal Microscopy (sCLSM) to Investigate Eocene Amber Microfossils

  • Dmitry D. Vorontsov,
  • Vasiliy B. Kolesnikov,
  • Elena E. Voronezhskaya,
  • Evgeny E. Perkovsky,
  • Marielle M. Berto,
  • Joseph Mowery,
  • Ronald Ochoa and
  • Pavel B. Klimov

23 March 2023

Amber is known as one of the best sources of fossil organisms preserved with exceptional fidelity. Historically, different methods of imaging have been applied to amber, including optical microscopy and microtomography. These methods are sufficient t...

  • Review
  • Open Access
2,696 Views
22 Pages

16 October 2025

Lipids are spatiotemporally organized in cell membranes, where they play indispensable roles in regulating diverse biological processes. Their distribution and dynamics are intricately coupled to signal transduction, membrane trafficking, and host&nd...

  • Article
  • Open Access
10 Citations
4,132 Views
16 Pages

Imaging of the ocular vasculature can provide new insights into the pathophysiology of ocular diseases. This study proposes a novel high-frequency super-resolution ultrasound localization microscopy (SRULM) technique and evaluates its ability to meas...

  • Article
  • Open Access
7 Citations
4,348 Views
9 Pages

2 April 2021

The ongoing threat of human immunodeficiency virus (HIV-1) requires continued, detailed investigations of its replication cycle, especially when combined with the most physiologically relevant, fully infectious model systems. Here, we demonstrate the...

  • Article
  • Open Access
8 Citations
3,531 Views
14 Pages

6 December 2021

Scanning electron microscopy (SEM) plays a crucial role in the characterization of nanoparticles. Unfortunately, due to the limited resolution, existing imaging techniques are insufficient to display all detailed characteristics at the nanoscale. Har...

  • Article
  • Open Access
4 Citations
3,168 Views
16 Pages

Far-Field Super-Resolution Optical Microscopy for Nanostructures in a Reflective Substrate

  • Aiqin Zhang,
  • Kunyang Li,
  • Guorong Guan,
  • Haowen Liang,
  • Xiangsheng Xie and
  • Jianying Zhou

The resolution of an optical microscope is determined by the overall point spread function of the system. When examining structures significantly smaller than the wavelength of light, the contribution of the background or surrounding environment can...

  • Article
  • Open Access
1 Citations
2,450 Views
17 Pages

14 December 2023

A method for the analysis of super-resolution microscopy images is presented. This method is based on the analysis of stochastic trajectories of particles moving on the membrane of a cell with the assumption that this motion is determined by the prop...

  • Article
  • Open Access
14 Citations
4,496 Views
11 Pages

Neuronal Localization of SENP Proteins with Super Resolution Microscopy

  • Luca Colnaghi,
  • Andrea Conz,
  • Luca Russo,
  • Clara A. Musi,
  • Luana Fioriti,
  • Tiziana Borsello and
  • Mario Salmona

25 October 2020

SUMOylation of proteins plays a key role in modulating neuronal function. For this reason, the balance between protein SUMOylation and deSUMOylation requires fine regulation to guarantee the homeostasis of neural tissue. While extensive research has...

  • Article
  • Open Access
2 Citations
2,853 Views
13 Pages

Chromatin Organization after High-LET Irradiation Revealed by Super-Resolution STED Microscopy

  • Benjamin Schwarz,
  • Nicole Matejka,
  • Sarah Rudigkeit,
  • Matthias Sammer and
  • Judith Reindl

Ion-radiation-induced DNA double-strand breaks can lead to severe cellular damage ranging from mutations up to direct cell death. The interplay between the chromatin surrounding the damage and the proteins responsible for damage recognition and repai...

  • Article
  • Open Access
3 Citations
7,509 Views
26 Pages

Expanding Insights: Harnessing Expansion Microscopy for Super-Resolution Analysis of HIV-1–Cell Interactions

  • Annett Petrich,
  • Gyu Min Hwang,
  • Laetitia La Rocca,
  • Mariam Hassan,
  • Maria Anders-Össwein,
  • Vera Sonntag-Buck,
  • Anke-Mareil Heuser,
  • Vibor Laketa,
  • Barbara Müller and
  • Severina Klaus
  • + 1 author

15 October 2024

Expansion microscopy has recently emerged as an alternative technique for achieving high-resolution imaging of biological structures. Improvements in resolution are achieved by physically expanding samples through embedding in a swellable hydrogel be...

  • Article
  • Open Access
32 Citations
7,057 Views
19 Pages

Comparing Super-Resolution Microscopy Techniques to Analyze Chromosomes

  • Ivona Kubalová,
  • Alžběta Němečková,
  • Klaus Weisshart,
  • Eva Hřibová and
  • Veit Schubert

14 February 2021

The importance of fluorescence light microscopy for understanding cellular and sub-cellular structures and functions is undeniable. However, the resolution is limited by light diffraction (~200–250 nm laterally, ~500–700 nm axially). Meanwhile, super...

  • Article
  • Open Access
2,299 Views
16 Pages

3 September 2025

Structured illumination microscopy (SIM) with π/2 phase-shift modulation traditionally relies on frequency-domain computation, which greatly limits processing efficiency. In addition, the illumination regime inherent in structured illumination tec...

  • Article
  • Open Access
7 Citations
3,216 Views
16 Pages

3 November 2024

This study presents an advanced integration of Multi-modal Raman Light Sheet Microscopy with zero-shot learning-based computational methods to significantly enhance the resolution and analysis of complex three-dimensional biological structures, such...

  • Article
  • Open Access
14 Citations
4,454 Views
11 Pages

30 April 2020

Microsphere-assisted microscopy serves as an effective super-resolution technique in biological observations and nanostructure detections, and optical trapping is widely used for the manipulation of small particles like microspheres. In this study, w...

  • Article
  • Open Access
89 Citations
17,798 Views
13 Pages

Chemically Induced Photoswitching of Fluorescent Probes—A General Concept for Super-Resolution Microscopy

  • Ulrike Endesfelder,
  • Sebastian Malkusch,
  • Benjamin Flottmann,
  • Justine Mondry,
  • Piotr Liguzinski,
  • Peter J. Verveer and
  • Mike Heilemann

13 April 2011

We review fluorescent probes that can be photoswitched or photoactivated and are suited for single-molecule localization based super-resolution microscopy. We exploit the underlying photochemical mechanisms that allow photoswitching of many synthetic...

  • Article
  • Open Access
27 Citations
6,545 Views
16 Pages

Super-Resolution Microscopy Reveals a Direct Interaction of Intracellular Mycobacterium tuberculosis with the Antimicrobial Peptide LL-37

  • Dhruva Deshpande,
  • Mark Grieshober,
  • Fanny Wondany,
  • Fabian Gerbl,
  • Reiner Noschka,
  • Jens Michaelis and
  • Steffen Stenger

14 September 2020

The antimicrobial peptide LL-37 inhibits the growth of the major human pathogen Mycobacterium tuberculosis (Mtb), but the mechanism of the peptide–pathogen interaction inside human macrophages remains unclear. Super-resolution imaging technique...

  • Article
  • Open Access
1,070 Views
10 Pages

Total internal reflection fluorescence–structured illumination microscopy (TIRF-SIM) can enhance the lateral resolution of fluorescence microscopy to twice the diffraction limit, enabling subtler observations of activity in subcellular life. Ho...

  • Article
  • Open Access
10 Citations
4,470 Views
13 Pages

Low-Power Two-Color Stimulated Emission Depletion Microscopy for Live Cell Imaging

  • Jia Zhang,
  • Xinwei Gao,
  • Luwei Wang,
  • Yong Guo,
  • Yinru Zhu,
  • Zhigang Yang,
  • Wei Yan and
  • Junle Qu

10 September 2021

Stimulated emission depletion (STED) microscopy is a typical laser-scanning super-resolution imaging technology, the emergence of which has opened a new research window for studying the dynamic processes of live biological samples on a nanometer scal...

  • Review
  • Open Access
4 Citations
4,508 Views
19 Pages

Pushing the Resolution Limit of Stimulated Emission Depletion Optical Nanoscopy

  • Sejoo Jeong,
  • Dongbin Koh,
  • Eunha Gwak,
  • Chinmaya V. Srambickal,
  • Daeha Seo,
  • Jerker Widengren and
  • Jong-Chan Lee

Optical nanoscopy, also known as super-resolution optical microscopy, has provided scientists with the means to surpass the diffraction limit of light microscopy and attain new insights into nanoscopic structures and processes that were previously in...

  • Review
  • Open Access
44 Citations
9,659 Views
17 Pages

Super-Resolution Microscopy Reveals Diversity of Plant Centromere Architecture

  • Veit Schubert,
  • Pavel Neumann,
  • André Marques,
  • Stefan Heckmann,
  • Jiri Macas,
  • Andrea Pedrosa-Harand,
  • Ingo Schubert,
  • Tae-Soo Jang and
  • Andreas Houben

Centromeres are essential for proper chromosome segregation to the daughter cells during mitosis and meiosis. Chromosomes of most eukaryotes studied so far have regional centromeres that form primary constrictions on metaphase chromosomes. These mono...

  • Review
  • Open Access
31 Citations
7,724 Views
16 Pages

Fluorescent Probes for STED Optical Nanoscopy

  • Sejoo Jeong,
  • Jerker Widengren and
  • Jong-Chan Lee

22 December 2021

Progress in developing fluorescent probes, such as fluorescent proteins, organic dyes, and fluorescent nanoparticles, is inseparable from the advancement in optical fluorescence microscopy. Super-resolution microscopy, or optical nanoscopy, overcame...

  • Review
  • Open Access
17 Citations
7,990 Views
15 Pages

Synapse structures, including neuronal and immunological synapses, can be seen as the plasma membrane contact sites between two individual cells where information is transmitted from one cell to the other. The distance between the two plasma membrane...

  • Article
  • Open Access
2 Citations
3,369 Views
15 Pages

30 July 2024

We report on the synthesis of two fluorescent probes which can be activated by β-Galactosidase (β-Gal) enzymes and/or light. The probes contained 2-nitro-4-oxybenzyl and 3-nitro-4-oxybenzyl fragments, with β-Gal residues linked to C-4....

  • Review
  • Open Access
18 Citations
8,027 Views
15 Pages

The tight junction (TJ) and the adherens junction (AJ) bridge the paracellular cleft of epithelial and endothelial cells. In addition to their role as protective barriers against bacteria and their toxins they maintain ion homeostasis, cell polarity,...

  • Review
  • Open Access
4 Citations
3,229 Views
15 Pages

Recent Advancements in Imaging Techniques for Individual Extracellular Vesicles

  • Tatsuki Isogai,
  • Koichiro M. Hirosawa and
  • Kenichi G. N. Suzuki

10 December 2024

Extracellular vesicles (EVs), secreted from most cells, are small lipid membranes of vesicles of 30 to 1000 nm in diameter and contain nucleic acids, proteins, and intracellular organelles originating from donor cells. EVs play pivotal roles in inter...

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