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Biology

Biology is an international, peer-reviewed, open access journal of biological sciences published semimonthly online by MDPI.
The Spanish Society for Nitrogen Fixation (SEFIN) and Federation of European Laboratory Animal Science Associations (FELASA) are affiliated with Biology and their members receive discounts on the article processing charges.
Indexed in PubMed | Quartile Ranking JCR - Q1 (Biology)

All Articles (8,886)

Environmental lead (Pb) exposure remains a significant public health concern, and its association with cerebrovascular injury and Alzheimer’s disease (AD) is increasingly recognized. In this study, we demonstrated using an in vitro system that Pb exposure significantly increased the expression and release of endothelial plasminogen activator inhibitor-1 (PAI-1). A conditioned medium collected from Pb-treated endothelial cells induced the formation of complement component 3 (C3)+ decorin+ A1-like astrocytes, which had been shown to be specifically associated with vascular amyloid. Immunoprecipitation with the PAI-1 antibody to remove PAI-1 from the culture medium, or treatment of endothelial cells with PAI-1 inhibitors, significantly inhibited the formation of C3+ decorin+ A1-like astrocytes. Furthermore, in vivo studies further supported this finding, indicating that lead does indeed increase the number of perivascular C3+ decorin+ A1-like astrocytes, and that the PAI-1 inhibitor blocked this induction. Building upon our previous findings, we demonstrate that lead exposure may induce cerebral amyloid angiopathy (CAA) pathology through the formation of C3+ decorin+ A1-like astrocytes mediated by endothelial cell PAI-1. Our results strongly suggest that PAI-1 is a key mediator linking endothelial stress and lead-induced vascular amyloidosis pathology.

7 February 2026

Vascular-associated Aβ deposition in APP/PS1 mice exposed to Pb. (A) Representative cortical sections from APP/PS1 mice illustrating collagen IV immunoreactivity (red) and thioflavin S–positive amyloid deposits (green). The merged image (orange) highlights regions where vascular and amyloid signals overlap. Arrowheads denote amyloid localized along blood vessels. (Scale bar: 50 μm.) (B) Quantification of vessel-associated amyloid deposition in brain sections from 16-week-old APP/PS1 mice treated with PbAc or NaAc. n = 5 mice per group. Data are presented as mean ± SD; **: p < 0.01, analyzed by one-way ANOVA followed by Dunnett’s post hoc test. Note: Control: sodium acetate-treated group, Pb: lead acetate-treated group, Thio S: thioflavin S.

Autoimmune diseases result from a breakdown of immune tolerance influenced by genetic and environmental factors. Regulatory T cells (Tregs) maintain immune homeostasis, while interferon-γ (IFNγ) has context-dependent proinflammatory and regulatory roles. In B10.S mice, mercury-induced autoimmunity (HgIA) emerges within approximately 4 weeks of Hg exposure and is marked by antinucleolar antibody (ANoA) production, polyclonal B-cell activation, and deposition of immune complexes in the kidney. We investigated whether Tregs attenuate HgIA and evaluated IFNγ’s role in this regulation. Female WT and IFNγ−/− B10.S mice received HgCl2 or water for 4 weeks until all mice developed ANoA. CD4+CD25+Foxp3+ Tregs or CD4+CD25Foxp3 cells were transferred into HgCl2-exposed WT recipients and monitored for 13 weeks. Compared with Hg-primed non-Tregs, Hg-primed WT Tregs were statistically associated with significantly reduced autoantibody levels, lower IgG1/IgG2a, and significantly decreased glomerular IgG/C3c deposition, suggesting that Hg exposure may modulate Treg function. Conversely, both water- and Hg-primed Tregs and non-Tregs from IFNγ−/− donors elicited profoundly diminished autoantibody production and renal pathology in recipients. IFNγ−/− mice lacked fibrillarin-specific responses, highlighting its requirement for HgIA initiation. While non-Treg transfer failed to suppress HgIA, Treg transfer reduced HgIA and highlighted relevance for immune-regulatory therapies, especially where environmental toxicants may drive autoimmune disease.

7 February 2026

Study design and treatment schedule for donor (upper boxes) and recipient (lower box) mice. Non-Treg (CD4+CD25−Foxp3−) or Treg (CD4+CD25+Foxp3+) cells were adoptively transferred to the new sets of WT B10.S. All recipient mice were then exposed to 4 mg HgCl2/L for 13 weeks. All mice were euthanized after 13 weeks, at which blood and tissue samples were collected for further analysis.

The snailfish family (Liparidae) represents one of the most rapidly speciating and ecologically diverse lineages of marine fishes, with species distributed across a broad bathymetric range from intertidal zones to the hadal depths. Despite their ecological and evolutionary significance, phylogenetic relationships and adaptive mechanisms within Liparidae remain poorly resolved due to morphological conservatism, phenotypic plasticity, and limited genomic resources due to challenges such as sampling difficulties and a reliance on partial mtDNA markers. In this study, we sequenced, assembled, and annotated the complete mitochondrial genomes of two snailfish species, Liparis chefuensis and Liparis tanakae, collected from the Yellow Sea. The mitogenome of L. chefuensis is 18,870 bp in length, encoding 13 protein-coding genes (PCGs), 2 rRNAs, and 22 tRNAs, while that of L. tanakae spans 17,485 bp and contains 13 PCGs, 2 rRNAs, and 23 tRNAs. Phylogenetic reconstruction based on the concatenated sequences of 13 mitochondrial PCGs from 15 liparid species revealed that L. chefuensis clusters within the subgenus Lyoliparis, contradicting its previous classification under Careliparis and suggesting a need for taxonomic reassessment. Notably, we identified distinct patterns of tRNA gene rearrangement in the cluster between ND2 and COI, which suggest a link to both phylogeny and habitat depth. Shallow-water species (<30 m) possess the tRNATrp-tRNATyr-tRNAAla-tRNAAsn-tRNACys (WYANC) arrangement, whereas deep-water species (>100 m) display the derived tRNATrp-tRNAAsn-tRNACys-tRNATyr-tRNAAla-tRNACys/tRNAAla (WNCYAC/A) configurations. These rearrangements are hypothesized to originate from tandem duplication events followed by random gene loss, potentially reflecting adaptive evolution to deep-sea environments. Additionally, L. tanakae exhibits a markedly higher number of non-canonical G–U and A–C base pairs in its tRNA secondary structures, indicating substantial structural divergence. Our findings not only provide essential mitogenomic resources for snailfish systematics and species identification but also propose that tRNA rearrangements in mitochondrial genomes may serve as genomic innovations facilitating deep-sea colonization. This study enhances our understanding of mitochondrial genome evolution and environmental adaptation in marine fishes.

7 February 2026

Circular maps of the mitochondrial genomes of Liparis chefuensis (A) and Liparis tanakae (B). The outer and inner circles represent genes encoded by the heavy strand and light strand (dark green: D-loop, light green: rRNA, orange: PCGs, pink: tRNA), respectively. The small interior circles indicate GC skew (red: positive, green: negative).

This study sought to evaluate the neuroprotective effects of YGD in an oxidative stress-induced Alzheimer’s disease (AD)-like cellular model and to elucidate the underlying molecular pathways, with a focus on tau phosphorylation, Aβ accumulation, and antioxidant defense mechanisms. Rat primary hippocampal neurons were exposed to hydrogen peroxide to induce oxidative stress. The effects of YGD on neuronal viability, neurite outgrowth, and synaptic integrity were assessed using the immunodetection of microtubule-associated protein 2 (MAP2), postsynaptic density protein 95 (PSD-95), and synapsin-1. Levels of phosphorylated tau and Aβ were quantified, and the involvement of extracellular signal-regulated kinase (ERK), glycogen synthase kinase 3β (GSK3β), and nuclear factor-erythroid 2-related factor-2 (Nrf2) pathways was examined. Additionally, in silico molecular docking studies targeting the ATP-binding site of GSK3β were conducted to screen major phytochemicals from the ten medicinal herbs constituting YGD. YGD markedly enhanced neuronal viability under oxidative stress, promoted neurite extension, and increased synaptic marker expression (MAP2, PSD-95, and synapsin-1). Treatment reduced phosphorylated tau by suppressing ERK and GSK3β activation and significantly decreased Aβ accumulation. YGD also upregulated antioxidant defenses via the activation of the Nrf2 pathway. Docking simulations identified oleanolic acid (from Cornus officinalis) as the most potent GSK3β binder (−9.86 ± 0.40 kcal/mol), forming stable interactions with ARG96, ASN95, and GLU97. Additional compounds, including alisol C, drypemolundein B, and friedelin, demonstrated favorable binding energies and engaged key ATP-binding site residues. YGD confers neuroprotection through the integrated modulation of tau phosphorylation, Aβ pathology, and oxidative stress, partly via the multi-target engagement of GSK3β by its constituent phytochemicals. These findings support that YGD attenuates oxidative stress-induced AD-like cellular alterations.

6 February 2026

YGD enhances cell viability and provides neuroprotection to hippocampal neurons under H2O2-induced oxidative stress. (A) CCK assay results following the treatment of hippocampal neurons, cultured for 2 days, with YGD at concentrations of 1–100 μg/mL, either alone or in combination with H2O2, and analyzed on day 3. (B) CCK assay results for hippocampal neurons cultured for 14 days, treated with YGD at concentrations of 1–100 μg/mL, either alone or in combination with H2O2, and analyzed on day 15. (C) Representative images from the live/dead assay on day 3, where hippocampal neurons were cultured for 2 days and treated with optimal concentrations of YGD (10, 25, and 50 μg/mL) alongside the H2O2 and blank groups. The white scale bar represents 400 μm. (D) Quantitative analysis of the live/dead assay showing the dead cell intensity. (E) Quantitative analysis of the live/dead assay displaying the live/dead ratio. Data are presented as the mean ± standard deviation. Significant variations were evaluated using one-way analysis of variance (ANOVA) coupled with Tukey’s post hoc analysis. Significance levels are denoted as follows: #### p &lt; 0.0001 compared with the blank group; * p &lt; 0.05, ** p &lt; 0.01, *** p &lt; 0.001, and **** p &lt;0.0001 compared with the H2O2 group.

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“Biodiversity and Ecosystem Function under Global Change”
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Biology, Ecology and Management of Aquatic Macrophytes and Algae
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Biology, Ecology and Management of Aquatic Macrophytes and Algae

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Biology - ISSN 2079-7737