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65 Results Found

  • Article
  • Open Access
41 Citations
5,612 Views
15 Pages

Applying a Portable Backpack Lidar to Measure and Locate Trees in a Nature Forest Plot: Accuracy and Error Analyses

  • Yuyang Xie,
  • Tao Yang,
  • Xiaofeng Wang,
  • Xi Chen,
  • Shuxin Pang,
  • Juan Hu,
  • Anxian Wang,
  • Ling Chen and
  • Zehao Shen

8 April 2022

Accurate tree positioning and measurement of structural parameters are the basis of forest inventory and mapping, which are important for forest biomass calculation and community dynamics analyses. Portable backpack lidar that integrates the simultan...

  • Article
  • Open Access
4 Citations
2,914 Views
12 Pages

Stochastic Safety Radius on UPGMA

  • Ruriko Yoshida,
  • Lillian Paul and
  • Peter Nesbitt

18 December 2022

Unweighted Pair Group Method with Arithmetic Mean (UPGMA) is one of the most popular distance-based methods to reconstruct an equidistant phylogenetic tree from a distance matrix computed from an alignment of sequences. Since we use equidistant trees...

  • Article
  • Open Access
2,399 Views
20 Pages

Sub-Tree-Based Approach for Reconfiguration of Light-Tree Pair without Flow Interruption in Sparse Wavelength Converter Network

  • Amanvon Ferdinand Atta,
  • Joël Christian Adépo,
  • Bernard Cousin and
  • Souleymane Oumtanaga

Network reconfiguration is an important mechanism for network operators to optimize network performance and optical flow transfer. It concerns unicast and multicast connections. Multicast connections are required to meet the bandwidth requirements of...

  • Article
  • Open Access
1 Citations
4,127 Views
17 Pages

10 May 2024

The standard approach for constructing a phylogenetic tree from a set of sequences consists of two key stages. First, a multiple sequence alignment (MSA) of the sequences is computed. The aligned data are then used to reconstruct the phylogenetic tre...

  • Article
  • Open Access
2 Citations
1,360 Views
24 Pages

On Some Distance Spectral Characteristics of Trees

  • Sakander Hayat,
  • Asad Khan and
  • Mohammed J. F. Alenazi

23 July 2024

Graham and Pollack in 1971 presented applications of eigenvalues of the distance matrix in addressing problems in data communication systems. Spectral graph theory employs tools from linear algebra to retrieve the properties of a graph from the spect...

  • Article
  • Open Access
7 Citations
3,499 Views
23 Pages

A holistic strategy is established for automated UAV-LiDAR strip adjustment for plantation forests, based on hierarchical density-based clustering analysis of the canopy cover. The method involves three key stages: keypoint extraction, feature simila...

  • Article
  • Open Access
9 Citations
2,628 Views
31 Pages

11 August 2022

It is difficult to detect bridges in synthetic aperture radar (SAR) images due to the inherent speckle noise of SAR images, the interference generated by strong coastal scatterers, and the diversity of bridge and coastal terrain morphologies. In this...

  • Article
  • Open Access
27 Citations
6,389 Views
14 Pages

16 March 2017

Inter-tree competition is considered one of the most important ecological processes of forest development. However, its importance in structuring the spatial patterns of plant communities remains controversial. We collected observational data from tw...

  • Article
  • Open Access
3 Citations
3,711 Views
7 Pages

5 May 2019

Diverse studies of viral evolution have led to the recognition that the evolutionary rates of viral taxa observed are dependent on the time scale being investigated—with short-term studies giving fast substitution rates, and orders of magnitude...

  • Article
  • Open Access
19 Citations
5,842 Views
18 Pages

29 July 2023

Three-dimensional (3D) reconstruction is an essential technique to visualize and monitor the growth of agricultural and forestry plants. However, inspecting tall plants (trees) remains a challenging task for single-camera systems. A combination of lo...

  • Article
  • Open Access
2 Citations
1,506 Views
20 Pages

1 October 2023

A novel distance function named resistance distance was introduced on the basis of electrical network theory. The resistance distance between any two vertices u and v in graph G is defined to be the effective resistance between them when unit resisto...

  • Article
  • Open Access
6 Citations
2,322 Views
24 Pages

23 May 2023

The presence of unculturable fungi, variability in timing and frequency of fungal fruiting, hyper-rich fungal communities, and genetic and environmental variability explains the difficulty in adopting ideal sampling schemes and fungal identification...

  • Article
  • Open Access
798 Views
18 Pages

9 September 2025

This work addresses the broken symmetry in syntactic–semantic representations for Aspect-Based Sentiment Analysis, where advancements have been driven by the use of pre-trained language models to achieve contextual understanding and graph neura...

  • Article
  • Open Access
3 Citations
2,145 Views
30 Pages

A Method Coupling NDT and VGICP for Registering UAV-LiDAR and LiDAR-SLAM Point Clouds in Plantation Forest Plots

  • Fan Wang,
  • Jiawei Wang,
  • Yun Wu,
  • Zhijie Xue,
  • Xin Tan,
  • Yueyuan Yang and
  • Simei Lin

12 December 2024

The combination of UAV-LiDAR and LiDAR-SLAM (Simultaneous Localization and Mapping) technology can overcome the scanning limitations of different platforms and obtain comprehensive 3D structural information of forest stands. To address the challenges...

  • Article
  • Open Access
16 Citations
3,479 Views
20 Pages

Trunk-Constrained and Tree Structure Analysis Method for Individual Tree Extraction from Scanned Outdoor Scenes

  • Xiaojuan Ning,
  • Yishu Ma,
  • Yuanyuan Hou,
  • Zhiyong Lv,
  • Haiyan Jin,
  • Zengbo Wang and
  • Yinghui Wang

13 March 2023

The automatic extraction of individual tree from mobile laser scanning (MLS) scenes has important applications in tree growth monitoring, tree parameter calculation and tree modeling. However, trees often grow in rows and tree crowns overlap with var...

  • Article
  • Open Access
10 Citations
4,301 Views
14 Pages

Effects of Prescribed Fire, Site Factors, and Seed Sources on the Spread of Invasive Triadica sebifera in a Fire-Managed Coastal Landscape in Southeastern Mississippi, USA

  • Shaoyang Yang,
  • Zhaofei Fan,
  • Xia Liu,
  • Andrew W. Ezell,
  • Martin A. Spetich,
  • Scott K. Saucier,
  • Sami Gray and
  • Scott G. Hereford

19 February 2019

In the Gulf of Mexico coastal region, prescribed fire has been increasingly used as a management tool to restore declining native ecosystems, but it also increases the threat posed by biological invasion, since the treated sites are more susceptible...

  • Article
  • Open Access
403 Views
24 Pages

Physics-Consistent Overtopping Estimation for Dam-Break Induced Floods via AE-Enhanced CatBoost and TreeSHAP

  • Hanze Li,
  • Yazhou Fan,
  • Zhenzhu Meng,
  • Xinhai Zhang,
  • Jinxin Zhang and
  • Liang Wang

23 December 2025

Dam break problem-induced floods can trigger hazardous dike overtopping, demanding predictions that are fast, accurate, and interpretable. We pursue two objectives: (i) introducing a new alpha evolution (AE) optimization scheme to improve tree-model...

  • Brief Report
  • Open Access
9 Citations
2,813 Views
12 Pages

15 February 2023

Pontastacus leptodactylus (Eschscholtz, 1823) (Decapoda:Astacidea:Astacidae) constitutes an ecologically and economically highly important species. In the present study, the mitochondrial genome of the freshwater crayfish P. leptodactylus from Greece...

  • Article
  • Open Access
8 Citations
5,437 Views
10 Pages

11 December 2015

Onychostoma barbatulum and O. alticorpus, two primarily freshwater cyprinid fish, have similar morphological characters and partially overlapping ecological habitats. In order to explore the genetic differences between these two species, chromosomal...

  • Article
  • Open Access
28 Citations
4,593 Views
17 Pages

Genetic Diversity and Population Genetic Structure of Cinnamomum camphora in South China Revealed by EST-SSR Markers

  • Yongda Zhong,
  • Aihong Yang,
  • Zhiting Li,
  • Hui Zhang,
  • Lipan Liu,
  • Zhaoxiang Wu,
  • Yanqiang Li,
  • Tengyun Liu,
  • Meng Xu and
  • Faxin Yu

13 November 2019

Cinnamomum camphora is a valuable broad-leaf tree indigenous to South China and East Asia and has been widely cultivated and utilized by humans since ancient times. However, owing to its overutilization for essential oil extraction, the Transplanting...

  • Article
  • Open Access
7 Citations
6,186 Views
11 Pages

Comparative Leaf Phenology of White Oak and Northern Red Oak

  • Jayesh B. Samtani,
  • James E. Appleby and
  • John B. Masiunas

In the landscape, loss of interveinal tissue in developing leaves (leaf tatters) is common for white oak (Quercus alba L.), but not northern red oak (Quercus rubra L.). Previous research identified the cause of leaf tatters, as exposure of unfolding...

  • Article
  • Open Access
1,183 Views
12 Pages

New Data on Rhinogobius chiengmaiensis and Rhinogobius mekongianus in Thailand by DNA Barcoding and Morphological Methods

  • Siriluck Tuncharoen,
  • Paiboon Panase,
  • Nontree Panprommin,
  • Eakapol Wangkahart,
  • Supranee Ruenkoed,
  • Keatipong Mongkolwit and
  • Dutrudi Panprommin

19 March 2025

A combination of morphological analysis and DNA barcoding (partial sequences of the cytochrome c oxidase I (COI) gene) was used to differentiate four gobiid fish species in the family Oxudercidae. Rhinogobius chiengmaiensis and Rhinogobius mekongianu...

  • Article
  • Open Access
12 Citations
4,872 Views
14 Pages

Nearest Neighborhood Characteristics of a Tropical Mixed Broadleaved Forest Stand

  • Hong Hai Nguyen,
  • Yousef Erfanifard and
  • Ion Catalin Petritan

14 January 2018

Structural complexity and local biodiversity of species-rich tropical forests can be characterized by their spatial patterns, which contribute to species intra- and interspecific interactions. Aiming to describe spatial patterns of species at fine sp...

  • Article
  • Open Access
2 Citations
2,294 Views
12 Pages

30 May 2023

Nothofagus alessandrii is an endangered species with limited and fragmented distribution in the Maule coastal forest of central Chile. Understanding the factors and processes that influence the natural growth of this species is crucial for mitigating...

  • Article
  • Open Access
17 Citations
4,167 Views
20 Pages

An Improved RANSAC-ICP Method for Registration of SLAM and UAV-LiDAR Point Cloud at Plot Scale

  • Shuting Zhang,
  • Hongtao Wang,
  • Cheng Wang,
  • Yingchen Wang,
  • Shaohui Wang and
  • Zhenqi Yang

21 May 2024

Simultaneous Localization and Mapping (SLAM) using LiDAR technology can acquire the point cloud below the tree canopy efficiently in real time, and the Unmanned Aerial Vehicle LiDAR (UAV-LiDAR) can derive the point cloud of the tree canopy. By regist...

  • Article
  • Open Access
5 Citations
5,556 Views
14 Pages

2 December 2016

Wireless mesh networks (WMNs) have been considered as one of the key technologies for the configuration of wireless machines since they emerged. In a WMN, wireless routers provide multi-hop wireless connectivity between hosts in the network and also...

  • Article
  • Open Access
6 Citations
3,889 Views
11 Pages

The Complete Mitochondrial Genome and Phylogenetic Analyses of To Chicken in Vietnam

  • Lan Doan Pham,
  • Thi Thanh Nhan Giang,
  • Van Ba Nguyen,
  • Thi Phuong Mai Pham,
  • Thi Thu Thuy Tran,
  • Thi Quynh Chau Nguyen,
  • Khanh Van Nguyen and
  • Duy Ngoc Do

15 May 2023

Indigenous chicken breeds have both cultural significance and economic value since they possess unique genetic characteristics that enable them to adapt to the local environment and contribute to biodiversity, food security, and sustainable agricultu...

  • Article
  • Open Access
1 Citations
2,127 Views
24 Pages

The purpose of this paper is twofold. On a technical side, we propose an extension of the Hausdorff distance from metric spaces to spaces equipped with asymmetric distance measures. Specifically, we focus on extending it to the family of Bregman dive...

  • Article
  • Open Access
25 Citations
4,726 Views
17 Pages

Testing the Effect of Snag and Cavity Supply on Deadwood-Associated Species in a Managed Boreal Forest

  • Samuel Dufour-Pelletier,
  • Junior A. Tremblay,
  • Christian Hébert,
  • Thibault Lachat and
  • Jacques Ibarzabal

9 April 2020

Standing deadwood is an important attribute of old-growth boreal forests and it provides essential microhabitats for deadwood-associated species. In managed boreal forests, short rotations tend to limit the amount and diversity of standing deadwood....

  • Article
  • Open Access
2 Citations
1,812 Views
23 Pages

Phylogenetics and Evolutionary Dynamics of Yunnan Acrididae Grasshoppers Inferred from 17 New Mitochondrial Genomes

  • Keyao Zhang,
  • Jing Song,
  • Junhui Lu,
  • Lu Zhao,
  • Weian Deng,
  • Delong Guan and
  • Benyong Mao

3 February 2025

Yunnan Province, a global biodiversity hotspot, hosts a diverse array of Acrididae grasshoppers essential for ecosystem dynamics and agriculture. To elucidate the phylogenetic relationships and evolutionary history of this group, we sequenced and ana...

  • Article
  • Open Access
2,258 Views
15 Pages

Small-Mammal Genomics Highlights Viaducts as Potential Dispersal Conduits for Fragmented Populations

  • Tabitha C. Y. Hui,
  • Qian Tang,
  • Elize Y. X. Ng,
  • Ju Lian Chong,
  • Eleanor M. Slade and
  • Frank E. Rheindt

28 January 2024

Wildlife crossings are implemented in many countries to facilitate the dispersal of animals among habitats fragmented by roads. However, the efficacy of different types of habitat corridors remains poorly understood. We used a comprehensive sampling...

  • Article
  • Open Access
46 Citations
6,304 Views
17 Pages

The application of deep learning techniques may prove difficult when datasets are small. Recently, techniques such as one-shot learning, few-shot learning, and Siamese networks have been proposed to address this problem. In this paper, we propose the...

  • Article
  • Open Access
11 Citations
2,903 Views
12 Pages

4 April 2022

Sarcasm detection remains a challenge for numerous Natural Language Processing (NLP) tasks, such as sentiment classification or stance prediction. Existing sarcasm detection studies attempt to capture the subtle semantic incongruity patterns by using...

  • Article
  • Open Access
5 Citations
2,636 Views
11 Pages

Development of Microsatellite Markers for Tanacetum cinerariifolium (Trevis.) Sch. Bip., a Plant with a Large and Highly Repetitive Genome

  • Filip Varga,
  • Zlatko Liber,
  • Jernej Jakše,
  • Ante Turudić,
  • Zlatko Šatović,
  • Ivan Radosavljević,
  • Nina Jeran and
  • Martina Grdiša

5 July 2022

Dalmatian pyrethrum (Tanacetum cinerariifolium (Trevis.) Sch. Bip.) is an outcrossing plant species (2n = 18) endemic to the eastern Adriatic coast and source of the natural insecticide pyrethrin. Due to the high repeatability and large genome (1C-va...

  • Article
  • Open Access
8 Citations
2,989 Views
28 Pages

In this study, 52 AAAP genes were identified in the L. chinense genome and divided into eight subgroups based on phylogenetic relationships, gene structure, and conserved motif. A total of 48 LcAAAP genes were located on the 14 chromosomes, and the r...

  • Article
  • Open Access
3 Citations
3,199 Views
11 Pages

29 April 2021

Microsatellite DNA analysis is a powerful tool for assessing population genetics. The main aim of this study was to assess the genetic potential of the peregrine falcon population covered by the restitution program. We characterized individuals from...

  • Article
  • Open Access
2 Citations
2,155 Views
16 Pages

The Genetic Diversity of Natural Ilex chinensis Sims (Aquifoliaceae) Populations as Revealed by SSR Markers

  • Sixuan Hou,
  • Peng Zhou,
  • Yanming Fang,
  • Xuejie Wang,
  • Min Zhang and
  • Qiang Zhang

26 April 2024

Ilex chinensis Sims. is an evergreen tree species native to China and mainly distributed in the region south of the Qinling Mountains and the Huai River. This species has important ornamental, medicinal, ecological, and economic values, and plays a p...

  • Article
  • Open Access
10 Citations
3,281 Views
19 Pages

Integration of Multi-Branch GCNs Enhancing Aspect Sentiment Triplet Extraction

  • Xuefeng Shi,
  • Min Hu,
  • Jiawen Deng,
  • Fuji Ren,
  • Piao Shi and
  • Jiaoyun Yang

29 March 2023

Aspect Sentiment Triplet Extraction (ASTE) is a complex and challenging task in Natural Language Processing (NLP). It aims to extract the triplet of aspect term, opinion term, and their associated sentiment polarity, which is a more fine-grained stud...

  • Article
  • Open Access
1 Citations
2,180 Views
22 Pages

Wood-Inhabiting Nematode, Bursaphelenchus ussuriensis sp. n. (Nematoda: Aphelenchoididae) from David Elm, with Molecular Phylogeny of the Genus Based on Partial Mitochondrial Genomes

  • Alexander Yu. Ryss,
  • Sergio Álvarez-Ortega,
  • Boris D. Efeykin,
  • Ivan A. Kerchev,
  • Kristina S. Polyanina,
  • Anna I. Solovyeva and
  • Sergei A. Subbotin

31 December 2024

A new nematode species, Bursaphelenchus ussuriensis sp. n. is described in the bark beetle–elm tree association (Scolytus jacobsoni and Ulmus davidiana var. japonica f. suberosa) in the Asian Pacific region of Russia. The new species belongs to...

  • Article
  • Open Access
159 Citations
21,526 Views
17 Pages

29 July 2014

Gap distributions in forests reflect the spatial impact of man-made tree harvesting or naturally-induced patterns of tree death being caused by windthrow, inter-tree competition, disease or senescence. Gap sizes can vary from large (>100 m2) to sm...

  • Article
  • Open Access
10 Citations
3,586 Views
12 Pages

Platycladus orientalis (i.e., Chinese thuja) is famous for its lifespan spanning hundreds, and even thousands, of years. Most ancient P. orientalis populations are widely distributed in China, with accessible historical records, making them valuable...

  • Article
  • Open Access
18 Citations
3,814 Views
16 Pages

Deep Contrast Learning Approach for Address Semantic Matching

  • Jian Chen,
  • Jianpeng Chen,
  • Xiangrong She,
  • Jian Mao and
  • Gang Chen

19 August 2021

Address is a structured description used to identify a specific place or point of interest, and it provides an effective way to locate people or objects. The standardization of Chinese place name and address occupies an important position in the cons...

  • Article
  • Open Access
5 Citations
5,465 Views
15 Pages

Vegetation Effects on LoRa-Based Wireless Sensor Communication for Remote Monitoring of Automatic Orchard Irrigation Status

  • Shahriar Ahmed,
  • Md Nasim Reza,
  • Samsuzzaman,
  • Md Rejaul Karim,
  • Hongbin Jin,
  • Heetae Kim and
  • Sun-Ok Chung

26 December 2024

LoRa-based sensor nodes may provide a reliable solution for wireless communication in orchard cultivation and smart farming, facilitating real-time environmental monitoring. However, the signal strength and data integrity can be affected by several f...

  • Article
  • Open Access
6 Citations
6,765 Views
11 Pages

Structural Patterns in Complex Systems Using Multidendrograms

  • Sergio Gómez,
  • Alberto Fernández,
  • Clara Granell and
  • Alex Arenas

9 December 2013

Complex systems are usually represented as an intricate set of relations between their components forming a complex graph or network. The understanding of their functioning and emergent properties are strongly related to their structural properties....

  • Article
  • Open Access
6 Citations
2,505 Views
11 Pages

20 August 2022

Triadica sebifera (Linnaeus) Small is a tree species native to China. The seeds of T. sebifera are rich in oil and are widely used in industrial fields. To explore the genetic diversity and genetic differentiation of T. sebifera germplasm resources,...

  • Article
  • Open Access
13 Citations
3,975 Views
14 Pages

Evaluation of the Genetic Diversity and Differentiation of Black Locust (Robinia pseudoacacia L.) Based on Genomic and Expressed Sequence Tag-Simple Sequence Repeats

  • Qi Guo,
  • Xiuyu Li,
  • Shuhong Yang,
  • Zhiheng Yang,
  • Yuhan Sun,
  • Jiangtao Zhang,
  • Sen Cao,
  • Li Dong,
  • Saleem Uddin and
  • Yun Li

Understanding the genetic diversity and differentiation of the genetic resources of a species is important for the effective use and protection of forest tree resources. Ex situ development is a common method for the protection of genetic diversity a...

  • Article
  • Open Access
8 Citations
2,101 Views
20 Pages

Assessment of the Spatial Variability and Uncertainty of Shreddable Pruning Biomass in an Olive Grove Based on Canopy Volume and Tree Projected Area

  • Antonio Rodríguez-Lizana,
  • Alzira Ramos,
  • María João Pereira,
  • Amílcar Soares and
  • Manuel Castro Ribeiro

25 June 2023

Olive pruning residues are a by-product that can be applied to soil or used for energy production in a circular economy model. Its benefits depend on the amount of pruning, which varies greatly within farms. This study aimed to investigate the spatia...

  • Article
  • Open Access
28 Citations
9,018 Views
17 Pages

10 February 2014

Celery (Apium graveolens L.) is one of the most economically important vegetables worldwide, but genetic and genomic resources supporting celery molecular breeding are quite limited, thus few studies on celery have been conducted so far. In this stud...

  • Article
  • Open Access
2 Citations
3,821 Views
23 Pages

10 February 2023

The factors that determine the relative rates of amino acid substitution during protein evolution are complex and known to vary among taxa. We estimated relative exchangeabilities for pairs of amino acids from clades spread across the tree of life an...

  • Article
  • Open Access
771 Views
13 Pages

Population Substructures of Castanopsis tribuloides in Northern Thailand Revealed Using Autosomal STR Variations

  • Patcharawadee Thongkumkoon,
  • Jatupol Kampuansai,
  • Maneesawan Dansawan,
  • Pimonrat Tiansawat,
  • Nuttapol Noirungsee,
  • Kittiyut Punchay,
  • Nuttaluck Khamyong and
  • Prasit Wangpakapattanawong

26 July 2025

This study investigates the genetic diversity and population structure of Castanopsis tribuloides, a vital tree species in Asian forest ecosystems. Understanding the genetic patterns of keystone forest species provides critical insights into forest r...

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