Search Results (397)

Tamarindus indica L., a key economic tree species in tropical regions, suffers severely from postharvest decay. From 2023 to 2025, disease fruits exhibiting pericarp softening, pulp browning, and sticky exudates were collected in Yunnan, China. Pathogenicity tests following Koch’s postulates, combined with morphological characterization and phylogenetic analyses of the internal transcribed spacer (ITS), translation elongation factor 1-alpha (TEF 1α), and beta-tubulin (TUB) gene regions, identified the causal pathogen as Botryosphaeria fabicerciana (isolates ZWML-06, ZWML-44, ZWML-17). This is the first report of this postharvest disease on tamarind in Yunnan, filling an etiological gap. Additionally, an endophytic bacterium, designated BV-1, was isolated from asymptomatic pulp tissues. Whole-genome sequencing and phylogenetic analysis identified it as Bacillus velezensis. Strain BV-1 exhibited strong in vitro antagonistic activity against the pathogen, indicating promising biocontrol potential. Functional annotation revealed that BV-1 possesses a complex genetic system with developed transporter systems; its core metabolic network is dominated by nitrogen metabolism and redox processes, suggesting a potential “multi-target” antimicrobial mechanism. This study provides a theoretical basis and novel resources for the green control of postharvest diseases in tamarind. Full article

In this study, four Fusarium strains isolated from Poaceae plants infected by Claviceps spp. and one strain isolated from the stem of Cirsium arvense collected from two regions of Russia that are separated by a long distance were analyzed in detail. These fungi were accurately identified through a phylogenetic analysis of the fragments of translation elongation factor 1-α and RNA polymerase second largest subunit loci. Four of them belong to F. heterosporum species, and one strain, MFG 13060, together with the historical reference strain BBA 62226, forms a distinct lineage within the F. heterosporum species complex (FHSC). The morphological features of the anamorph structures of the fungi within the FHSC are presented. All the analyzed F. heterosporum strains are heterothallic and require a partner to mate. The fertile perithecia of F. heterosporum were obtained in a crossing experiment, and the teleomorph structures were characterized in detail. The screening of 19 mycotoxins typically produced by Fusarium fungi using high-performance liquid chromatography with tandem mass spectrometry revealed the ability of the strains to produce only moniliformin on an autoclaved rice substrate. A reassessment of the species diversity, distribution, and significance of fungi belonging to the FHSC is necessary to elucidate the unclear relationships between F. heterosporum, Claviceps fungi, and cereal plants. Full article

Major depressive disorder remains a leading cause of disability, and decades of monoamine-centered pharmacology have yielded delayed and often incomplete relief. Rapid-acting antidepressants reshaped the field by linking swift symptom improvement to glutamatergic plasticity, yet durable benefit depends on how newly reconfigured circuits are stabilized and tuned. This review synthesizes evidence that antidepressant efficacy arises from the coordinated engagement of synaptic plasticity, spanning induction and consolidation, and intrinsic excitability, which provides gain control, and proposes an integrated framework to guide future discovery. It first outlines induction through N-methyl-D-aspartate receptors (NMDARs) and α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid receptors (AMPARs), exemplified by ketamine and esketamine, followed by consolidation mediated by tropomyosin receptor kinase B (TrkB) signaling, translational disinhibition via eukaryotic elongation factor 2 kinase (eEF2K), and presynaptic stabilization indexed by synaptic vesicle glycoprotein 2A (SV2A); together, these processes transform transient potentiation into persistent network change. It then highlights intrinsic excitability, emphasizing voltage-gated potassium channel subfamily Q (Kv7), hyperpolarization-activated cyclic nucleotide-gated (HCN), and G protein-gated inwardly rectifying potassium (GIRK) channels as circuit-level governors that normalize firing and limit relapse-prone hyperexcitability. Finally, it presents the Induction–Consolidation–Maintenance (ICM) framework as a hypothesis-generating roadmap for future studies, with SV2A positron emission tomography (PET), electroencephalography (EEG), and functional magnetic resonance imaging (fMRI) biomarkers discussed as candidate tools rather than validated guides for treatment timing or patient selection. The proposed contribution is not another list of plasticity pathways, but a phase-specific model that links synaptic induction, consolidation, and excitability-based maintenance to distinct therapeutic windows, biomarkers, and relapse-prevention strategies. Full article

Plants perceive light signals through photoreceptors such as CRY1 to regulate growth and development. It is well-known that Arabidopsis CRY1 is a nucleocytoplasmic protein that mediates light inhibition of hypocotyl elongation in the nucleus, but the mechanisms by which CRY1 regulates root growth and functions in the cytoplasm remain poorly understood. Here, we identified eIF3G1, a subunit of the eukaryotic translation initiation factor 3 (eIF3) complex, as a CRY1-interacting protein associated with light-regulated root development. Under blue light, eif3g1 mutants showed longer primary roots, whereas eIF3G1 overexpression reduced root elongation, accompanied by corresponding changes in root apical meristem size. Differential irradiation experiments indicated that shoot illumination is required for eIF3G1-dependent root phenotypes. Transcriptome analysis revealed changes in translation-related and light-responsive genes in response to eIF3G1 perturbation. Comparison with the cry1 transcriptome revealed overlapping differentially expressed genes, including BIC1 and BIC2, and the bic1 bic2 double mutant showed reduced root elongation. Together, these findings identify eIF3G1 as a CRY1-interacting factor that contributes to the shoot-dependent regulation of root growth under blue light, suggesting that eIF3G1 may be associated with the CRY1-dependent shoot-to-root regulation of root growth. Full article

Mucoralean fungi are mostly saprotrophic. During a fungal investigation of soil in Guangdong and Anhui provinces of China, five new species of Mucorales were discovered, namely Cunninghamella brevispora sp. nov., C. geminata sp. nov., Mucor chlamydosporiferus sp. nov., M. citrinus sp. nov., and M. magnisporus sp. nov. The identification is based on morphological characteristics, as well as molecular phylogenetics of the internal transcribed spacer (ITS), large subunit ribosomal RNA gene (LSU rDNA), translation elongation factor 1-alpha gene (TEF1α), and RNA polymerase II largest subunit gene (RPB1). Cunninghamella brevispora sp. nov. is sister to C. guizhouensis, and is distinguished by short sporangiophores. Cunninghamella geminata sp. nov. is sister to C. subclavata; rhizoids are absent in the former but well-developed in the latter. Mucor chlamydosporiferus sp. nov. is closely related to M. prayagensis, and is characterized by abundant chlamydospores. Mucor citrinus sp. nov. is closely related to M. paraorantomantidis, and is differentiated by pale yellow sporangiospores. Mucor magnisporus sp. nov. is sister to M. merdicola, and is discriminated by large sporangiospores. To date, with the addition of the five new species described herein, the total number of accepted species in the genus Cunninghamella and Mucor has increased to 49 and 163, respectively. Full article

Termite-associated Ophiocordyceps species remain understudied despite the high diversity of the genus. Here we describe Ophiocordyceps minuta (holotype CXAC 0026) from termites (Termitidae, Macrotermitinae) collected in Yunnan, China. Phylogenetic analyses based on nrLSU (nuclear large subunit ribosomal RNA), tef1-α (translation elongation factor 1-alpha), and rpb2 (RNA polymerase II second largest subunit) sequences resolve this fungus as a distinct lineage. Notably, deep genetic divergence (65 bp in tef1-α) between the two ex-type strains of the allied O. fusiformis (BCC 93025 and BCC 93026) reveals cryptic diversity within that nominal species. Beyond the new species, a morphological assessment of termite-associated Ophiocordyceps indicates that perithecial immersion status, ascospore morphology, and conidial features are the most taxonomically valuable characters for this ecological group. These findings expand the known diversity in southwest China and underscore the importance of integrating phylogenetic data with key morphological traits for species delimitation in under-explored habitats. Full article

Alternaria blight, caused by fungi of the genus Alternaria, is one of the most common and damaging diseases affecting tomatoes, leading to significant yield losses. The intensive use of chemical fungicides faces the problems of pathogen resistance development and negative environmental impacts. This study investigated the possibility of using RNA interference technology based on exogenous double-stranded RNAs (dsRNAs) to protect tomatoes against the causal agent of early blight (EB), Alternaria alternata. Key genes of the pathogen A. alternata were selected as targets: Alt-a1 (a major allergen and virulence factor), TEF1a (translation elongation factor 1-alpha) and β-Tub (β-tubulin). Specific dsRNAs were synthesized in vitro and applied to tomato plants (Solanum lycopersicum L. cv. Micro-Tom) simultaneously with inoculation of A. alternata strain C7.24-T2-L-F1 spores. Visual assessment, measurement of chlorophyll A and B, and real-time quantitative PCR analysis showed that treatment with dsRNAs targeting the Alt-a1, TEF1a and β-Tub genes significantly suppressed infection development, reducing the amount of pathogen DNA in plant tissues by 7 to 27 times depending on the dsRNA type. The most effective was dsRNA to the Alt-a1 gene. Thus, the obtained results demonstrate the promise of spray-induced gene silencing (SIGS) as a strategy for protecting tomato plants against the pathogen A. alternata. Full article

Cudonia and Pleurocordyceps comprise a relatively limited number of species worldwide. In particular, Pleurocordyceps represents an ecologically important group of entomopathogenic fungi with considerable potential for medicinal applications. In this study, two novel species, Cudonia aurantiaca and Pleurocordyceps tianmushanensis, were collected from the National Nature Reserve of Mount Tianmu, Zhejiang Province, China. Detailed morphological descriptions and illustrations are provided, and genus-level phylogenetic relationships are inferred based on a combined multi-locus sequence dataset comprising the internal transcribed spacer (ITS), small subunit ribosomal RNA (SSU), large subunit ribosomal RNA (LSU), translation elongation factor 1-alpha (tef-1α), RNA polymerase II largest subunit (rpb1), and RNA polymerase II second largest subunit (rpb2) gene regions. This study contributes to a better understanding of the diversity and taxonomy of Cudonia and Pleurocordyceps. Full article

Spinocerebellar Ataxia type 2 (SCA2) and Amyotrophic Lateral Sclerosis type 13 (ALS13) are triggered by polyglutamine expansion in Ataxin-2 (ATXN2). To understand these neurodegenerative disorders at the molecular level, the brains of 10-month-old Atxn2-CAG100-knockin mice were analyzed as microglial, astroglial and neuronal fractions via global RNA sequencing. Data were validated by comparison with the spinal cord oligonucleotide microarray profile or filtered by RNA-seq consistency. Here, we show that the mutation causes a massive inflammatory response in microglia and a reciprocal loss of neuronal transcripts in glial fractions, suggesting severe synapse loss. Beyond these general neurodegenerative signs, we identify pathognomonic changes in the machinery for protein translation and RNA splicing. Glial fractions showed upregulation of Gpnmb (to 2082%), Cst7, Clec7a, Axl, Csf1, Lgals3, Lgals3bp, Slc11a1, and Usp18 as an unspecific neuroinflammatory signature, versus downregulation of axonal Nefh (to <19%), and synaptic Scn4b, Camk2b, Rab15, and Grin1 mRNAs correlating with circuit disconnection. In all fractions, reductions in Kif5a, Rph3a, and Cplx1 were noted versus disease-specific inductions of ribosomal subunits, presumably mirroring the partial loss-of-function of ATXN2 as RNA translation modulator. Selective accumulations of embryonic factors Rnu1b2 and Eef1a1 versus downregulation of adult Eef1a2 specify the mutation impact on splicing and translation elongation. As a potential underpinning of toxic gain-of-function, the proteostasis transcript Rnf213 appeared increased in astroglial and microglial fractions. These transcriptome data suggest altered ribosomal and spliceosome machinery, with massive microgliosis versus mild astrogliosis, at the core of SCA2 and ALS13. Full article

Autophagy is a crucial process for cellular self-regulation and renewal. Upon exposure to stress, membrane structures—primarily derived from the endoplasmic reticulum and mitochondria, with contributions from the plasma membrane—drive autophagosome biogenesis. This process begins with the formation of a cup-shaped phagophore, which elongates to sequester cytoplasmic cargo, closes to form an autophagosome, and ultimately fuses with lysosomes to create an autolysosome where degradation and recycling occur. This regulated process plays a vital role in maintaining cellular homeostasis, the pathogenesis of various diseases, and modulation of inflammation. Astaxanthin (AST), a carotenoid produced by microalgae, various microorganisms and marine organisms, possesses a unique chemical structure that endows it with significant biological activities, including potent antioxidant and anti-inflammatory properties. Emerging evidence, primarily from preclinical studies, suggests that AST modulates autophagy by regulating signaling pathways such as Reactive Oxygen Species (ROS)/Mitogen-activated Protein Kinase (MAPK) and interacting with nuclear factor erythroid 2-related factor 2(Nrf2)-mediated antioxidant responses, thereby influencing inflammatory balance. This review systematically elucidates how AST acts as a key “molecular modulator” in animal or cellular models, dynamically regulating autophagy to restore cellular homeostasis and thereby influencing the course and outcome of inflammation. Furthermore, we explore the autophagy-mediated anti-inflammatory effects of AST across different organ systems and discuss its preliminary clinical translational potential and future challenges, aiming to provide a concise and forward-looking roadmap for this promising research field. Full article

Background: The root of Schisandra propinqua (Wall.) Baill. var. sinensis Oliv is a traditional ethnomedicine in China; it was widely used to treat abscesses, sores, carbuncles, rheumatism, and so on. The purpose of this study was to elucidate the bacteriostatic mechanism of the ethyl acetate extract from the root of Schisandra propinqua (Wall.) Baill. var. Sinensis Oliv (Xiao Xue Teng) against Staphylococcus aureus ATCC 25923 (S. aureus ATCC 25923). Methods: Bioactive bacteriostatic constituents in Xiao Xue Teng were identified through Hybrid Quadrupole-TOF LC/MS/MS. The minimum inhibitory concentration (MIC) of Xiao Xue Teng against S. aureus ATCC 25923 was determined using the microbroth dilution method. A time–kill curve analysis was used to evaluate the bacteriostatic effects. SDS-PAGE coupled with nano-liquid NanoLC-ESI-MS/MS, real-time PCR, and scanning electron microscopy (SEM) was used to study the bacteriostatic mechanism of Xiao Xue Teng against S. aureus ATCC 25923. Results: The MIC of Xiao Xue Teng against S. aureus ATCC 25923 was determined to be 15.625 µg/mL. The translation initiation factor (IF-2) and elongation factor (EF-Tu) were significantly decreased in S. aureus ATCC 25923 after treatment with Xiao Xue Teng, while the proteins SodA and AhpC were obviously increased. The intracellular levels of total reactive oxygen species (ROS) and hydrogen peroxide (H₂O₂) were significantly increased (p < 0.01) after the treatment with Xiao Xue Teng. Concurrently, the activities of SOD, CAT and GSH-Px were significantly increased (p < 0.01). Moreover, cellular swelling and shrinkage were observed using SEM. Conclusions: The bacteriostatic mechanism of Xiao Xue Teng against S. aureus ATCC 25923 was related to eliciting oxidative stress, inhibiting protein synthesis and enhancing cytoplasmic membrane permeability. Full article

Anthocyanins are widespread specialized metabolites that provide pigmentation and antioxidant capacity, contributing to pollinator and seed-disperser attraction and to plant resistance to diverse environmental stresses. In human diets, anthocyanins are valued for their antioxidant and health-promoting properties. The biosynthetic pathway of anthocyanins is relatively conserved across plant species and is controlled by structural genes that encode the enzymes of the pathway along with regulatory genes, particularly transcription factors. This network integrates developmental and environmental signals, with light serving as a dominant cue: anthocyanins typically accumulate in light-exposed tissues and are repressed in darkness. A key node in this light-dependent switch is CONSTITUTIVE PHOTOMORPHOGENIC 1 (COP1), an E3 ubiquitin ligase that, in the dark, promotes polyubiquitination and proteasome-mediated turnover of positive regulators of anthocyanin production. Although ELONGATED HYPOCOTYL 5 (HY5) is a canonical COP1 target and major activator of anthocyanin biosynthesis, COP1 control of this pathway extends well beyond HY5. Evidence from Arabidopsis and multiple horticultural crops, including apple, pear, eggplant, and tomato, indicates that COP1 also regulates anthocyanin accumulation through interactions with additional transcription factors and regulatory modules. Here, we synthesize recent advances in COP1-centered regulation of anthocyanin biosynthesis, with an emphasis on post-translational mechanisms and COP1 targets beyond HY5. We also discuss emerging opportunities to leverage this regulatory axis for nutritional improvement in horticultural species. Full article

Snake fruit (Salacca zalacca (Gaertner) Voss) is renowned for its taste and nutritional value; however, the snake fruit rot diseases caused by fungal pathogens can lead to significant economic losses. In this study, a fungal isolate was obtained from the rotten snake fruit with brown rot symptoms at the fruit apex upon removal of the peel. The causal agent was identified as Thielaviopsis species based on cultural and morphometric characteristics. Multi-locus phylogenetic analyses of the internal transcribed spacer (ITS) region, translation elongation factor 1-alpha (tef1-α) and beta-tubulin (tub2) genes revealed that the isolates Te 5742 clustered within Thielaviopsis euricoi Bat. & A. F. Vital. Furthermore, pathogenicity tests fulfilled Koch’s postulates, confirming T. euricoi as the pathogen responsible for the observed rot. This is the first report of T. euricoi causing fruit rot on snake fruit worldwide and will provide information on monitoring and management of snake fruit diseases in the garden and market. Full article

Fallopia multiflora (Thunb.) Harald is a valuable medicinal plant with substantial economic and therapeutic value, widely cultivated in southern China. In 2025, a leaf disease outbreak occurred in an F. multiflora plantation in Tongnan District, Chongqing, China. Diseased samples were collected for pathogen isolation, and seven representative strains were selected from 50 pure isolates via preliminary pathogenicity tests. Species identification was performed using a combination of morphological characterization and multi-locus phylogenetic analysis, targeting the Internal Transcribed Spacer (ITS), Translation Elongation Factor 1-alpha (TEF1), RNA Polymerase II Second Largest Subunit (RPB2), Beta-tubulin (β-TUB2), Heat Shock Protein 60 (HSP60), and Glyceraldehyde-3-Phosphate Dehydrogenase (G3PDH) gene regions. The isolates were identified as Alternaria alternata, Botrytis cinerea, Botrytis polygoni, Epicoccum mackenziei, and Lasiodiplodia citricola. Pathogenicity assays on living F. multiflora leaves confirmed that all identified species could induce disease symptoms, with distinct interspecific differences. This study verifies that multiple pathogenic fungi can infect F. multiflora, with potential co-infection. It improves our understanding of the pathogenic fungal community associated with this medicinal plant and lays a foundation for subsequent disease management in its cultivation. Full article

The genus Absidia is predominantly distributed in soil habitats. During the fungal investigation of soil collected from China (Guangxi, Yunnan, and Chongqing), four novel species of Absidia were identified, namely Absidia brunneola sp. nov., A. digitata sp. nov., A. exilis sp. nov., and A. tumida sp. nov. This identification was based on morphological characteristics and molecular analyses of the internal transcribed spacer (ITS), small subunit (SSU) and large subunit of ribosomal RNA gene (LSU rDNA), actin gene (ACT), and translation elongation factor 1-alpha gene (TEF1α). Absidia brunneola sp. nov. is sister to A. jiangxiensis, which is characterized by the production of light brown sporangia. Absidia digitata sp. nov. and A. tumida sp. nov. are sister to each other with the former species developing digitiform rhizoids and the latter swollen in sporangiophores. Absidia exilis sp. nov. is closely related to A. oblongispora, exhibiting poorly developed sporangiophores. To date, the total number of recognized species within the genus Absidia has increased to 66, including the four new ones herein. Full article