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Journal of Fungi

Journal of Fungi is an international, peer-reviewed, open access journal of mycology published monthly online by MDPI.
The Medical Mycological Society of the Americas (MMSA) and Spanish Phytopathological Society (SEF) are affiliated with the Journal of Fungi, and their members receive discounts on the article processing charges.
Indexed in PubMed | Quartile Ranking JCR - Q1 (Mycology)

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All Articles (6,390)

Molecular Advances and Sustainable Strategies in Mushroom Production for Food Security: A Review

  • Dali V. Francis,
  • Malu Kishorkumar and
  • Shyam S. Kurup
  • + 2 authors

Mushrooms offer a promising solution for sustainable food production due to their nutritional value, low resource requirements, and ability to grow in diverse environments. As interest in mushrooms grows, it is important to understand where current research is focused and where key gaps remain. A bibliometric analysis of 776 research articles indexed in Web of Science revealed a strong emphasis on yield, substrate reuse, and enzymatic degradation, but limited attention to molecular approaches, climate adaptation, and studies from arid regions such as the Middle East. Building on these findings, this review explores the ecological diversity of mushrooms and their adaptations across tropical, temperate, boreal, and arid ecosystems. It discusses the role of mycorrhizal and microbial interactions in nutrient cycling and environmental resilience, including desert truffle symbioses. Key pathways and genetic regulation involved in lignin degradation are outlined, along with recent advancements in transcriptomics, proteomics, genomics, metabolomics, and metagenomics that support improved cultivation and bioactive compound production. The review also addresses sustainable practices, such as microbiome integration and resource recycling, to enhance mushroom farming. The aim is to bring together ecological insights and molecular strategies to support sustainable mushroom production, particularly in regions facing resource and climate challenges.

11 March 2026

Annual publications and citations on mushroom research from 2021 to 2025 (Source: Web of Science Core Collection analytics).

Candida albicans is the primary agent of acute vulvovaginal candidiasis (VVC) and its recurrent form (RVVC). Local innate immunity contributes to both defense and pathogenesis during vaginal Candida infection, where epithelial β-defensins (BD) constitute key components of the mucosal barrier. We previously reported that epithelial BD-1 expression is dynamically modulated during murine and human vaginitis, revealing strain-dependent and stimulus-specific regulation but leaving the host pathways involved unresolved. This study functionally defines the contribution of key immune pathways to epithelial antimicrobial peptide regulation. Using a murine model of VVC and the virulent C. albicans strain SC5314, we aimed to evaluate the immune signaling pathways governing the temporal regulation of epithelial BD-1 and BD-3 expression during vaginal infection. In wild-type mice, both defensins displayed a biphasic pattern: early induction followed by attenuation as infection progressed. Genetic loss-of-function approaches revealed that NLRP3/IL-1β signaling is required for early BD-1 induction, whereas IL-17RA signaling preferentially supports sustained BD-3 expression. Together, these findings establish a causal and temporal link between host immune signaling and epithelial defensin regulation and reveal a transient subversion of mucosal defenses by C. albicans. This work advances understanding of epithelial innate immunity, defining distinct temporal programs for BD-1 and BD-3 and identifying NLRP3/IL-1β and IL-17RA signaling as key pathways shaping mucosal defensin expression.

11 March 2026

Establishment of Infection and Local Inflammatory Profile During Experimental Vaginal Candidiasis in C57BL/6 (WT) Mice. (A) Schematic representation of the murine VVC model in WT mice. (B) Individual (top) and mean (bottom) intravaginal fungal load, expressed as C. albicans CFU per mL of CVL, in Infected WT mice at days 2, 4, and 8 post infection. Values represent the mean ± SEM (n ≥ 14). Data were analyzed using the Mann–Whitney test at each specific time point. * p < 0.05. (C) Representative images of the cell populations present in CVL cytospin from Uninfected or Infected mice at day 2 post infection, stained with May–Grünwald Giemsa (×400 magnification). Red arrows indicate the ECs, and yellow arrows indicate the PMNs. (D) PMN counts from CVL cytospin preparations of Uninfected (gray line) and Infected (black line) WT mice at days 2, 4, and 8 post infection, stained with May–Grunwald Giemsa (×40 magnification). Values represent the mean ± SEM (n ≥ 10). (E) IL-1β levels in CVL samples from Uninfected (gray line) and Infected (black line) mice at days 2, 4, and 8 post infection, determined by means of ELISA. Values represent the mean ± SEM (n ≥ 6). (D,E) Data were analyzed using two-way ANOVA. Black asterisks indicate significant differences within the Infected group relative to day 2. Gray asterisks indicate significant differences between the Uninfected and Infected groups at the same time point. * p < 0.05. ** p < 0.01. # p = 0.06 (Uninfected and Infected, day 2). WT: wild-type; SC: subcutaneous; IV: intravaginal; CFU: Colony-Forming Units; CVL: Cervicovaginal lavage; PMNs: Polymorphonuclear neutrophils; ECs: Epithelial cells. SEM = standard error of the mean; ANOVA = analysis of variance.

Mexican species of Lactifluus have often been identified using names of morphologically similar Old World taxa. However, integrative approaches combining morphological and molecular data have revealed a high level of previously unrecognized diversity in the region. Here, two new species from lowland tropical Quercus forest are described: one in section Piperati (subgenus Lactifluus), characterized by pale yellow basidiomes and another in section Albati (subgenus Lactariopsis), with whitish basidiomes. The two taxa are distinguished by a unique set of macro- and micromorphological features, and their recognition is strongly supported by phylogenetic evidence from a concatenated dataset including nc ITS rDNA, nc 28S rDNA and the 6–7 region of the second largest subunit of the RNA polymerase II (rpb2).

11 March 2026

Concatenated three-locus (nc rDNA ITS, 28S and rpb2) phylogenetic analysis by maximum likelihood of Lactifluus species. Bootstrap scores (only values ≥ 70)/Posterior probabilities (only values ≥ 0.90) are indicated above branches. New species are indicated in bold: Lactifluus luteopallidus in the purple clade and L. mariae in the green clade.

Background: Pityriasis versicolor (PV) is a common superficial mycosis caused by Malassezia species. To describe the clinical and epidemiological characteristics of PV in Acapulco, Mexico, and to identify the associated Malassezia species using polymerase chain reaction–restriction fragment length polymorphism (PCR-RFLP). Methods: A cross-sectional study was conducted in 2024 at Acapulco General Hospital and a private dermatology clinic. Patients with clinically suspected PV and no recent antifungal or immunosuppressive treatment were enrolled. Skin scales were examined microscopically and cultured on modified Dixon agar. Isolates were identified using conventional methods and PCR-RFLP with HhaI and BstCI enzymes. Results: Sixty-nine patients were included; 68.1% were male, and the most affected age group was 11–20 years (34.8%). The hypochromic variant predominated (63.8%). PCR-RFLP identified M. globosa (33.3%) and M. furfur (31.9%) as the most frequent species, followed by M. restricta, M. sympodialis, and M. slooffiae. Species identification was unsuccessful in 11.6% of isolates. No statistically significant associations were found between clinical variants, gender, or species distribution. Conclusions: M. globosa and M. furfur were the predominant species in this tropical Mexican cohort. PCR-RFLP is a practical option for species-level identification, highlighting the diversity of Malassezia in PV.

11 March 2026

PCR and restriction fragment length polymorphism (RFLP) analysis of Malassezia reference strains were performed to compare them with the clinical isolates included in this study.; (A) PCR product; (B) Digestion products of reference strains treated with HhaI and BstCI enzymes. M: 100 bp molecular weight marker. Restriction patterns: Sym, M. sympodialis (400 and 220 bp); Fur, M. furfur (250 and 120 bp); Res, M. restricta (600 bp, undigested); Glo, M. globosa (450 and 130 bp); Slo, M. slooffiae (250, 110, and 80 bp); Cont: Undigested PCR product control.

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J. Fungi - ISSN 2309-608X