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1,154 Results Found

  • Article
  • Open Access
6 Citations
3,177 Views
13 Pages

27 February 2022

Directional root growth control is crucial for plant fitness. The degree of root growth deviation depends on several factors, whereby exogenous growth conditions have a profound impact. The perception of mechanical impedance by wild-type roots result...

  • Brief Report
  • Open Access
1 Citations
1,215 Views
8 Pages

29 November 2024

Typically, root system architecture (RSA) is not visible, and realistically, high-throughput methods for RSA trait phenotyping should capture key features of developing root systems in solid substrates in 3D. In a published 2-D study using thin rhizo...

  • Article
  • Open Access
7 Citations
4,759 Views
18 Pages

Digital, Three-Dimensional Visualization of Root Systems in Peat

  • Stella Gribbe,
  • Gesche Blume-Werry and
  • John Couwenberg

Belowground plant structures are inherently difficult to observe in the field. Sedge peat that mainly consists of partly decayed roots and rhizomes offers a particularly challenging soil matrix to study (live) plant roots. To obtain information on be...

  • Article
  • Open Access
2 Citations
2,456 Views
17 Pages

The phenotypic parameters of root systems are vital in reflecting the influence of genes and the environment on plants, and three-dimensional (3D) reconstruction is an important method for obtaining phenotypic parameters. Based on the characteristics...

  • Article
  • Open Access
16 Citations
4,252 Views
17 Pages

Reconstruction of Conifer Root Systems Mapped with Point Cloud Data Obtained by 3D Laser Scanning Compared with Manual Measurement

  • Chikage Todo,
  • Hidetoshi Ikeno,
  • Keitaro Yamase,
  • Toko Tanikawa,
  • Mizue Ohashi,
  • Masako Dannoura,
  • Toshifumi Kimura and
  • Yasuhiro Hirano

21 August 2021

Three-dimensional (3D) root system architecture (RSA) is a predominant factor in anchorage failure in trees. Only a few studies have used 3D laser scanners to evaluate RSA, but they do not check the accuracy of measurements. 3D laser scanners can qui...

  • Protocol
  • Open Access
9 Citations
5,815 Views
12 Pages

Fluorescence-Activated Cell Sorting Using the D-Root Device and Optimization for Scarce and/or Non-Accessible Root Cell Populations

  • Mary-Paz González-García,
  • Estéfano Bustillo-Avendaño,
  • Alvaro Sanchez-Corrionero,
  • Juan C. del Pozo and
  • Miguel A. Moreno-Risueno

14 April 2020

Fluorescence-activated cell sorting (FACS) is a technique used to isolate specific cell populations based on characteristics detected by flow cytometry. FACS has been broadly used in transcriptomic analyses of individual cell types during development...

  • Article
  • Open Access
4 Citations
3,062 Views
22 Pages

8 December 2022

Soil salinization is one of the significant concerns regarding irrigation with saline waters as an alternative resource for limited freshwater resources in arid and semi-arid regions. Thus, the investigation of proper management methods to control so...

  • Article
  • Open Access
30 Citations
17,180 Views
21 Pages

Tree Root System Characterization and Volume Estimation by Terrestrial Laser Scanning and Quantitative Structure Modeling

  • Aaron Smith,
  • Rasmus Astrup,
  • Pasi Raumonen,
  • Jari Liski,
  • Anssi Krooks,
  • Sanna Kaasalainen,
  • Markku Åkerblom and
  • Mikko Kaasalainen

16 December 2014

The accurate characterization of three-dimensional (3D) root architecture, volume, and biomass is important for a wide variety of applications in forest ecology and to better understand tree and soil stability. Technological advancements have led to...

  • Article
  • Open Access
16 Citations
6,687 Views
18 Pages

Top-Down System for Multi-Person 3D Absolute Pose Estimation from Monocular Videos

  • Amal El Kaid,
  • Denis Brazey,
  • Vincent Barra and
  • Karim Baïna

28 May 2022

Two-dimensional (2D) multi-person pose estimation and three-dimensional (3D) root-relative pose estimation from a monocular RGB camera have made significant progress recently. Yet, real-world applications require depth estimations and the ability to...

  • Article
  • Open Access
80 Citations
14,930 Views
20 Pages

18 June 2014

The objectives of this study were to detect coarse tree root and to estimate root biomass in the field by using an advanced 3D Ground Penetrating Radar (3D GPR) system. This study obtained full-resolution 3D imaging results of tree root system using...

  • Article
  • Open Access
2 Citations
1,941 Views
15 Pages

22 November 2023

Root fractal analysis is instrumental in comprehending the intricate structures of plant root systems, offering insights into root morphology, branching patterns, and resource acquisition efficiency. We conducted a field experiment on paddy–whe...

  • Article
  • Open Access
11 Citations
6,811 Views
10 Pages

High-Resolution 3D versus Standard-Resolution 2D T2-Weighted Turbo Spin Echo MRI for the Assessment of Lumbar Nerve Root Compromise

  • Elisabeth Sartoretti,
  • Thomas Sartoretti,
  • Árpád Schwenk,
  • Alex Alfieri,
  • David Czell,
  • Michael Wyss,
  • Lukas Wildi,
  • Christoph A. Binkert and
  • Sabine Sartoretti-Schefer

24 January 2022

Radiculopathy can be caused by nerve root irritation and nerve root compression at the level of the lateral recess or at the level of the intervertebral foramen. T2-weighted (T2w) MRI is considered essential to evaluate the nerve root and its course,...

  • Technical Note
  • Open Access
14 Citations
4,483 Views
18 Pages

Preliminary Application of Ground-Penetrating Radar for Reconstruction of Root System Architecture in Moso Bamboo

  • Longdong Xiao,
  • Chong Li,
  • Yue Cai,
  • Mingxing Zhou,
  • Tao Zhou,
  • Xueyan Gao,
  • Huaqiang Du,
  • Yufeng Zhou and
  • Guomo Zhou

17 July 2021

Root system architecture (RSA) refers to the geometric features and topology of the root system. Ground-penetrating radar (GPR) is a possible method of RSA reconstruction. However, because the topology of the root system is not directly accessible by...

  • Article
  • Open Access
2 Citations
1,712 Views
16 Pages

16 May 2025

Bamboo is widely distributed throughout the world, particularly in tropical and subtropical regions. This study aims to investigate the biomechanical properties of the root system of Bambusa pachinensis (Pachi bamboo). The root system of Pachi bamboo...

  • Article
  • Open Access
2 Citations
3,044 Views
11 Pages

21 November 2022

(1) Objective: The opacity of soils complicates studies of root infection. An example of this is the infection of Armillaria solidipes on poplar (Populus davidiana × Populus alba var. pyramidalis Louche) roots systems, which risks damaging tree...

  • Article
  • Open Access
5 Citations
2,339 Views
15 Pages

9 September 2022

Karst rocky desertification (KRD) is a typical fragile ecological environment with its key and difficult management point being vegetation restoration. Therefore, it is crucial to determine the adaptation mechanisms of suitable plants for ecological...

  • Article
  • Open Access
9 Citations
3,126 Views
11 Pages

2 February 2020

To assess the environmental risks of carbon capture and storage (CCS) due to underground CO2 leakage, many studies have examined the impact on plant growth; however, the effect of leaked CO2 on root morphology remains poorly understood. This study si...

  • Article
  • Open Access
4 Citations
3,899 Views
16 Pages

23 July 2020

Although the performance of the 3D human shape reconstruction method has improved considerably in recent years, most methods focus on a single person, reconstruct a root-relative 3D shape, and rely on ground-truth information about the absolute depth...

  • Article
  • Open Access
14 Citations
5,212 Views
11 Pages

Evaluation of the Efficacy of Different Irrigation Systems on the Removal of Root Canal Smear Layer: A Scanning Electron Microscopic Study

  • Vincenzo Tosco,
  • Riccardo Monterubbianesi,
  • José Aranguren,
  • Lucia Memè,
  • Angelo Putignano and
  • Giovanna Orsini

22 December 2022

Irrigation represents a crucial step in endodontics for bacteria disinfection and smear layer removal. Several irrigation strategies have been proposed, although their effects are controversial. This study aims to assess the comparison of four differ...

  • Technical Note
  • Open Access
5 Citations
4,930 Views
13 Pages

Rhizoboxes as Rapid Tools for the Study of Root Systems of Prunus Seedlings

  • Ricardo A. Lesmes-Vesga,
  • Liliana M. Cano,
  • Mark A. Ritenour,
  • Ali Sarkhosh,
  • José X. Chaparro and
  • Lorenzo Rossi

9 August 2022

Rootstocks are fundamental for peach production, and their architectural root traits determine their performance. Root-system architecture (RSA) analysis is one of the key factors involved in rootstock selection. However, there are few RSA studies on...

  • Article
  • Open Access
14 Citations
5,240 Views
14 Pages

Optimizing light conditions for vegetable seedling production in a closed transplant production system is critical for plant growth and seedling production. Additionally, energy use efficiency should be considered by growers when managing the light e...

  • Article
  • Open Access
347 Views
20 Pages

Analysis of Microscopic Characteristics of Pepper Seedling Root Systems and Study on Transplanting Gripping Injury Based on Micro-CT

  • Chao Zhang,
  • Tengxiao Feng,
  • Liming Zhou,
  • Yidong Ma,
  • Mingyong Li,
  • Huankun Wang and
  • Yizhou Wang

8 December 2025

While the root architecture of potted crop seedlings directly determines subsequent crop productivity and adaptability, these root systems remain challenging to quantify using conventional methods due to their structural complexity. To investigate th...

  • Article
  • Open Access
8 Citations
2,172 Views
18 Pages

14 May 2024

Cotton photosynthetic efficiency and the root–shoot relationship are two important physiological indexes affecting the final yield, but the interactive effects of plastic film mulching and planting density on the cotton photosynthetic efficienc...

  • Article
  • Open Access
4 Citations
1,339 Views
14 Pages

Plant Growth-Promoting Rhizobacteria Enhance Sweet Cherry Root System Development Through the Production of Volatile Organic Compounds

  • Nan Zeng,
  • Rutao Gai,
  • Dandan Wang,
  • Jiahe Pang,
  • Dingcun Zhang,
  • Junliang Ge,
  • Xinyue Bi,
  • Zhiyong Zhang,
  • Ning Zhang and
  • Bingxue Li

3 July 2025

Sweet cherry (Prunus avium L.), as a high-economic-value fruit with both nutritional and health functions, faces severely constrained plant growth due to underdeveloped root systems and suboptimal orchard site conditions. Plant growth-promoting rhizo...

  • Article
  • Open Access
7 Citations
2,055 Views
20 Pages

Study on Mechanical Characteristics of Living Stumps and Reinforcement Mechanisms of Slopes

  • Xueliang Jiang,
  • Wenjie Liu,
  • Hui Yang,
  • Haodong Wang and
  • Zhenyu Li

20 May 2024

As a novel technology for slope protection, living stumps have demonstrated the ability to significantly enhance slope stability. This study aims to investigate the mechanical properties of living-stump root systems and their reinforcement mechanisms...

  • Article
  • Open Access
6 Citations
3,497 Views
11 Pages

The objective of this study was to determine the efficiency of balloon flower sprout’s saponin production in a plant factory with artificial lighting (PFAL). Balloon flower has been traditionally used as herbal medicine and now, it is used as a...

  • Article
  • Open Access
10 Citations
3,488 Views
17 Pages

Genome-Wide Association Studies of Root-Related Traits in Brassica napus L. under Low-Potassium Conditions

  • Sani Ibrahim,
  • Nazir Ahmad,
  • Lieqiong Kuang,
  • Ze Tian,
  • Salisu Bello Sadau,
  • Muhammad Shahid Iqbal,
  • Xinfa Wang,
  • Hanzhong Wang and
  • Xiaoling Dun

12 July 2022

Roots are essential organs for a plant’s ability to absorb water and obtain mineral nutrients, hence they are critical to its development. Plants use root architectural alterations to improve their chances of absorbing nutrients when their supp...

  • Article
  • Open Access
6 Citations
2,757 Views
19 Pages

Integrated Transcriptomic and Metabolomic Analysis of Exogenous NAA Effects on Maize Seedling Root Systems under Potassium Deficiency

  • Dongying Zhou,
  • Yuanchun Zhang,
  • Qiqi Dong,
  • Kai Wang,
  • He Zhang,
  • Qi Du,
  • Jing Wang,
  • Xiaoguang Wang,
  • Haiqiu Yu and
  • Xinhua Zhao

Auxin plays a crucial role in regulating root growth and development, and its distribution pattern under environmental stimuli significantly influences root plasticity. Under K deficiency, the interaction between K+ transporters and auxin can modulat...

  • Feature Paper
  • Article
  • Open Access
13 Citations
6,237 Views
18 Pages

Effects of Solar Radiation on Dry Matter Distribution and Root Morphology of High Yielding Maize Cultivars

  • Xiaoxia Guo,
  • Yunshan Yang,
  • Huifang Liu,
  • Guangzhou Liu,
  • Wanmao Liu,
  • Yonghong Wang,
  • Rulang Zhao,
  • Bo Ming,
  • Ruizhi Xie and
  • Peng Hou
  • + 2 authors

20 February 2022

The root system connects the plant with the soil, which is a key factor in determining the utilization of soil resources and plant growth potential. Solar radiation can change maize shoot and root growth and affect grain formation. In this study, the...

  • Article
  • Open Access
4 Citations
1,716 Views
13 Pages

Establishment of Dittrichia viscosa L. Hairy Roots and Improvement of Bioactive Compound Production

  • Annalisa Paradiso,
  • Miriana Durante,
  • Sofia Caretto and
  • Angelo De Paolis

18 November 2024

Dittrichia viscosa is a ruderal plant species growing along roadsides and well adapting to extreme environmental conditions. D. viscosa plant tissues, especially leaves, are known to be a rich source of bioactive metabolites which have antioxidant, c...

  • Article
  • Open Access
33 Citations
4,342 Views
13 Pages

The Evaluation of Phenolic Acids and Flavonoids Content and Antiprotozoal Activity of Eryngium Species Biomass Produced by Biotechnological Methods

  • Małgorzata Kikowska,
  • Justyna Chanaj-Kaczmarek,
  • Monika Derda,
  • Anna Budzianowska,
  • Barbara Thiem,
  • Halina Ekiert and
  • Agnieszka Szopa

7 January 2022

Three species from the Eryngium L. genus—E. campestre, E. maritimum, and E. planum, plants with a rich chemical composition, were selected for phytochemical and biological studies. The applied biotechnological methods allowed to obtain the biom...

  • Article
  • Open Access
2 Citations
4,495 Views
14 Pages

Inferring Vertical Tree Growth Direction of Samanea saman and Delonix regia Trees with the Pattern of Lateral Root Distribution Using the Root Detector

  • Mohamad Miftah Rahman,
  • Yoga Fredisa,
  • Dodi Nandika,
  • Naresworo Nugroho,
  • Iskandar Zulkanaen Siregar and
  • Lina Karlinasari

19 February 2023

The root system is important for supporting tree growth and stability. In this study, we analyzed the relationship between the main lateral root distribution pattern and vertical tree growth direction based on root detection and analysis of tree morp...

  • Article
  • Open Access
4 Citations
3,355 Views
17 Pages

Micropropagation of Duboisia Species via Shoot Tip Meristem

  • Yuxin Xue,
  • Jayeni Chathurika Amarathunga Hiti-Bandaralage,
  • Dilani Tharanga Jambuthenne,
  • Zizhu Zhao and
  • Neena Mitter

Duboisia is an Australian native, commercially valuable for tropane alkaloid extraction. Clonal propagation of elite selections is essential to establish highly productive plantations. The current propagation system using stem cuttings is proven to b...

  • Article
  • Open Access
12 Citations
3,687 Views
12 Pages

Evaluation of the Shaping Ability of Three Thermally Treated Nickel–Titanium Endodontic Instruments on Standardized 3D-printed Dental Replicas Using Cone-Beam Computed Tomography

  • Laura Orel,
  • Oana-Alexandra Velea-Barta,
  • Luminita-Maria Nica,
  • Andreea-Simona Boscornea-Pușcu,
  • Razvan Mihai Horhat,
  • Roxana-Maria Talpos-Niculescu,
  • Cosmin Sinescu,
  • Virgil-Florin Duma,
  • Dan-Dumitru Vulcanescu and
  • Meda-Lavinia Negrutiu
  • + 1 author

29 August 2021

Background and Objectives: The aim of the present study is to compare the efficacy of three root canal preparation systems in the shaping of 3D-printed root canal replicas of single rooted teeth. Materials and Methods: Sixty 3D-printed root canal rep...

  • Article
  • Open Access
22 Citations
4,679 Views
14 Pages

Effects of Combined High Temperature and Waterlogging Stress at Booting Stage on Root Anatomy of Rice (Oryza sativa L.)

  • Bo Zhen,
  • Huizhen Li,
  • Qinglin Niu,
  • Husen Qiu,
  • Guangli Tian,
  • Hongfei Lu and
  • Xinguo Zhou

10 September 2020

In recent years, the alternating occurrence of high temperature and waterlogging disasters in South China has seriously reduced the yield of single cropping rice. Studying the changes in anatomical structure of the rice root system could provide theo...

  • Article
  • Open Access
2 Citations
1,732 Views
22 Pages

29 August 2025

Root architecture and anatomy critically regulate maize nitrogen (N) acquisition, but their coordinated low-N response in N-efficient hybrids remains poorly understood. Elucidating this mechanism is essential for advancing root system regulation and...

  • Article
  • Open Access
3,066 Views
15 Pages

Soil Inoculated with Streptomyces rochei D74 Invokes the Defense Mechanism of Helianthus annuus Against Orobanche cumana

  • Jiao Xi,
  • Tengqi Xu,
  • Zanbo Ding,
  • Chongsen Li,
  • Siqi Han,
  • Ruina Liang,
  • Yongqing Ma,
  • Quanhong Xue and
  • Yanbing Lin

Orobanche cumana Wallr. is a root parasitic plant that causes considerable yield losses of up to 50% in sunflower Helianthus annuus plantations. The holoparasite fulfills its entire demand for water, minerals, and organic nutrients from the host&rsqu...

  • Article
  • Open Access
7 Citations
4,037 Views
13 Pages

17 February 2021

Nasturtium is a popular herbal plant, widely cultivated as culinary and medicinal plants all over the world. However, the seed propagation of nasturtium is inefficient, and in-vitro propagation is sophisticated and high-cost. In this study, the cutti...

  • Article
  • Open Access
20 Citations
5,518 Views
31 Pages

Combined In Vitro Studies and in Silico Target Fishing for the Evaluation of the Biological Activities of Diphylleia cymosa and Podophyllum hexandrum

  • Marina Pereira Rocha,
  • Priscilla Rodrigues Valadares Campana,
  • Denise de Oliveira Scoaris,
  • Vera Lucia de Almeida,
  • Julio Cesar Dias Lopes,
  • Julian Mark Hugh Shaw and
  • Claudia Gontijo Silva

13 December 2018

This paper reports the in silico prediction of biological activities of lignans from Diphylleia cymosa and Podophyllum hexandrum combined with an in vitro bioassays. The extracts from the leaves, roots and rhizomes of both species were evaluated for...

  • Article
  • Open Access
6 Citations
2,783 Views
20 Pages

6 October 2023

Understanding the component traits determining salt stress tolerance is a major breeding target in wheat. The lack of genetic resources suited to salt-affected regions and the complexity of the traits involved impede progress in breeding salt-toleran...

  • Article
  • Open Access
2 Citations
2,300 Views
13 Pages

Genome-Wide and Transcriptome-Wide Association Analysis Identifies qRS-6D and Its Candidate Genes Regulating Root Development of Wheat Seedlings

  • Mingzhu Cheng,
  • Pengcheng Wang,
  • Xueting Liu,
  • Zhiwei Zhu,
  • Sichun Qiu,
  • Yuxiu Liu,
  • Xue Shi,
  • Wanquan Ji,
  • Shengbao Xu and
  • Xiaoming Wang

19 May 2024

Wheat (Triticum aestivum L.) is one of the most important cereal crops worldwide, and its production is challenged by global climate change and a shortage of resources. The root system plays a vital role in uptaking water and nutrients and sensing so...

  • Article
  • Open Access
12 Citations
2,473 Views
16 Pages

27 November 2022

The hydrological connectivity below the soil surface can influence the forest structure and function, especially soil and plant productivity. However, few studies have determined the changes in the hydrological connectivity below the soil surface wit...

  • Article
  • Open Access
1,806 Views
16 Pages

Previous research has shown the benefits of splitting nutrient application to plant roots either temporally or spatially. A split-root nutrient film technique (SR-NFT) was developed for lettuce where an NFT channel is divided longitudinally into two...

  • Article
  • Open Access
1 Citations
993 Views
21 Pages

Rhizobium-Enhanced Drought Tolerance in Red Kidney Beans Through Modification of Transcriptome and Microbial Communities

  • Xiaoliang Li,
  • Chunguo Huang,
  • Qian You,
  • Gaiya Jia,
  • Yongjunlin Tan,
  • Shenjie Wu,
  • Zhaosheng Kong and
  • Lixiang Wang

Drought is a significant abiotic stressor affecting crops globally. Beneficial microorganisms, such as rhizobia, have been shown to enhance crop resilience to such stresses. In this study, we isolated a highly efficient rhizobacterial strain (Rhizobi...

  • Article
  • Open Access
413 Views
12 Pages

19 January 2026

Understanding the dynamics of soil water and root systems is essential for managing and restoring ecosystems impacted by coal mining subsidence. However, existing research treats soil and plant responses separately, also with limited comparisons acro...

  • Article
  • Open Access
11 Citations
4,012 Views
17 Pages

16 November 2022

Vegetation slope protection has been widely utilized as an eco-friendly approach for slope stability. Up to now, research on the slope protection effect of shrubs and herbaceous vegetation is more than those of trees, which can be attributed to the c...

  • Article
  • Open Access
3 Citations
1,370 Views
21 Pages

8 January 2025

Roots play essential roles in the acquisition of water and minerals from soils in higher plants. However, water or nutrient limitation can alter plant root morphology. To clarify the spatial distribution characteristics of essential nutrients in citr...

  • Article
  • Open Access
10 Citations
3,060 Views
15 Pages

In Vivo Imaging and Quantification of Carbon Tracer Dynamics in Nodulated Root Systems of Pea Plants

  • Ralf Metzner,
  • Antonia Chlubek,
  • Jonas Bühler,
  • Daniel Pflugfelder,
  • Ulrich Schurr,
  • Gregor Huber,
  • Robert Koller and
  • Siegfried Jahnke

25 February 2022

Legumes associate with root colonizing rhizobia that provide fixed nitrogen to its plant host in exchange for recently fixed carbon. There is a lack of understanding of how individual plants modulate carbon allocation to a nodulated root system as a...

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