Skip to Content

329 Results Found

  • Article
  • Open Access
3 Citations
2,698 Views
17 Pages

Graph-Based Feature Crossing to Enhance Recommender Systems

  • Congyu Cai,
  • Hong Chen,
  • Yunxuan Liu,
  • Daoquan Chen,
  • Xiuze Zhou and
  • Yuanguo Lin

18 January 2025

In recommendation tasks, most existing models that learn users’ preferences from user–item interactions ignore the relationships between items. Additionally, ensuring that the crossed features capture both global graph structures and loca...

  • Article
  • Open Access
5 Citations
2,441 Views
16 Pages

16 December 2024

Integrated rice–fish farming is an innovative agricultural production pattern that combines rice cultivation with fish farming, enhancing agricultural productivity and ensuring food security. Partitioned rice–fish farming, an advancement...

  • Article
  • Open Access
2 Citations
2,264 Views
24 Pages

Coronary artery disease (CAD) remains a major global health concern, significantly contributing to morbidity and mortality. This study aimed to investigate the co-occurrence patterns of diagnoses and comorbidities in CAD patients using a network-base...

  • Article
  • Open Access
38 Citations
10,158 Views
22 Pages

18 February 2022

Texture analysis is key to better understanding of the relationships between the microstructures of the materials and their properties, as well as the use of models in process systems using raw signals or images as input. Recently, new methods based...

  • Article
  • Open Access
23 Citations
3,049 Views
19 Pages

The Yellow River is a valuable resource in the Ningxia Hui Autonomous Region and plays a vital role in local human activities and biodiversity. Bacteria are a crucial component of river ecosystems, but the driving factors and assembly mechanisms of b...

  • Article
  • Open Access
14 Citations
1,697 Views
37 Pages

This study presents a computer-aided diagnostic (CAD) framework that integrates multi-domain features through a hybrid methodology. The system uses several light deep networks (EfficientNetB0, MobileNet, and ResNet-18), which feature fewer layers and...

  • Article
  • Open Access
77 Citations
6,608 Views
31 Pages

19 February 2022

Leukemia is one of the most dangerous types of malignancies affecting the bone marrow or blood in all age groups, both in children and adults. The most dangerous and deadly type of leukemia is acute lymphoblastic leukemia (ALL). It is diagnosed by he...

  • Article
  • Open Access
2 Citations
1,046 Views
20 Pages

Storage reservoirs are crucial components of long-distance water diversion projects, where water diversion may lead to changes in microbial diversity and community structure. Seasonal variations also drive alterations in microbial communities. Howeve...

  • Article
  • Open Access
2,355 Views
16 Pages

The Taiyangshan Wetland, a valuable wetland resource in the arid zone of central Ningxia, is critical for flood storage and drought resistance, climate regulation, and biodiversity protection. Nevertheless, the community structure and diversity of ba...

  • Article
  • Open Access
1,078 Views
14 Pages

Unravelling Metazoan and Fish Community Patterns in Yujiang River, China: Insights from Beta Diversity Partitioning and Co-Occurrence Network

  • Yusen Li,
  • Dapeng Wang,
  • Yuying Huang,
  • Jun Shi,
  • Weijun Wu,
  • Chang Yuan,
  • Shiqiong Nong,
  • Chuanbo Guo,
  • Wenjian Chen and
  • Lei Zhou

17 July 2025

Understanding the biodiversity of aquatic communities and the underlying mechanisms that shape biodiversity patterns and community dynamics is crucial for the effective conservation and management of freshwater ecosystems. However, traditional survey...

  • Article
  • Open Access
129 Views
28 Pages

The Water-Level-Fluctuation Zones (WLFZ) of the Lower Jinsha River, as a typical transition areas between land and water, show crucial ecological functions. However, the relationship between soil nutrients and microbial communities in different plant...

  • Systematic Review
  • Open Access
1 Citations
4,118 Views
25 Pages

26 April 2024

This study explores the scholarly literature on emotional intelligence (EI) and psychological capital (PsyCap) using a comprehensive bibliometric analysis to map the research landscape and propose future directions. Data was collected from the Scopus...

  • Article
  • Open Access
5 Citations
2,439 Views
16 Pages

29 September 2024

Sulfur (S) is an essential nutrient for plant growth, influencing not only crop yields but also the composition and function of soil microbial communities. However, the differential effects of S fertilization on abundant and rare taxa in agricultural...

  • Article
  • Open Access
4 Citations
1,714 Views
17 Pages

Seasonal Dynamics of Eukaryotic Microbial Communities in the Water-Receiving Reservoir of the Long-Distance Water Diversion Project, China

  • Yingying Yang,
  • Fangfang Ci,
  • Ailing Xu,
  • Xijian Zhang,
  • Ning Ding,
  • Nianxin Wan,
  • Yuanyuan Lv and
  • Zhiwen Song

Inter-basin water transfer projects, such as the Yellow River to Qingdao Water Diversion Project (YQWD), are essential for addressing water scarcity, but impact local aquatic ecosystems. This study investigates the seasonal characteristics of eukaryo...

  • Article
  • Open Access
3 Citations
3,230 Views
14 Pages

16 June 2023

Embryogenesis is a well-coordinated process relying on precise cues and environmental signals that direct spatiotemporal embryonic patterning. Quite often, when one error in this process occurs, others tend to co-occur. We posit that investigating th...

  • Article
  • Open Access
8 Citations
3,443 Views
14 Pages

Drying Shapes Aquatic Fungal Community Assembly by Reducing Functional Diversity

  • Rebeca Arias-Real,
  • Pilar Hurtado,
  • Giulia Gionchetta and
  • Cayetano Gutiérrez-Cánovas

16 February 2023

Aquatic fungi are highly diverse organisms that play a critical role in global biogeochemical cycles. Yet it remains unclear which assembly processes determine their co-occurrence and assembly patterns over gradients of drying intensity, which is a c...

  • Article
  • Open Access
3 Citations
1,449 Views
18 Pages

Diversity and Key Organisms in the Biocrust of a Tropical Granite-Gneiss Rocky Outcrop

  • Mateus Fernandes Oliveira,
  • Cleber Cunha Figueredo and
  • Adaíses Simone Maciel-Silva

9 May 2025

Rocky outcrops are harsh habitats that support specialized organisms and communities, including biocrusts, which play roles in soil stabilization, water retention, and nutrient cycling. Despite their importance, tropical biocrusts, particularly in gr...

  • Article
  • Open Access
9 Citations
5,484 Views
18 Pages

Lactobacillus acidophilus DDS-1 Modulates the Gut Microbial Co-Occurrence Networks in Aging Mice

  • Ravichandra Vemuri,
  • Christopher J. Martoni,
  • Kylie Kavanagh and
  • Rajaraman Eri

25 February 2022

Age-related alterations in the gut microbiome composition and its impacts on the host’s health have been well-described; however, detailed analyses of the gut microbial structure defining ecological microbe–microbe interactions are limite...

  • Article
  • Open Access
6 Citations
2,772 Views
14 Pages

25 April 2023

The interaction between invasive plants and soil microbial communities is critical for plant establishment. However, little is known about the assembly and co-occurrence patterns of fungal communities in the rhizosphere soil of Amaranthus palmeri. Th...

  • Article
  • Open Access
2 Citations
1,660 Views
16 Pages

Burrowing animals are a critical driver of terrestrial ecosystem functioning, but we know little about their effects on soil microbiomes. Here, we evaluated the effect of burrowing animals on microbial assembly processes and co-occurrence patterns us...

  • Review
  • Open Access
59 Citations
9,205 Views
15 Pages

Organic wastes have the potential to be used as soil organic amendments after undergoing a process of stabilization such as composting or as a resource of renewable energy by anaerobic digestion (AD). Both composting and AD are well-known, eco-friend...

  • Article
  • Open Access
3 Citations
2,890 Views
13 Pages

Dynamics of Planktonic Microbial Community Associated with Saccharina japonica Seedling

  • Shanshan Wang,
  • Yongwei Yan,
  • Hao Qian,
  • Jie Li,
  • Tao Liu and
  • Zhaolan Mo

Macroalgae interact with planktonic microbes in seawater. It remains unclear how planktonic microbes interact with the environment and each other during the cultivation processes of commercially important algal species. Such an interaction is importa...

  • Article
  • Open Access
3 Citations
1,765 Views
16 Pages

The Contributions of Sub-Communities to the Assembly Process and Ecological Mechanisms of Bacterial Communities along the Cotton Soil–Root Continuum Niche Gradient

  • Shaodong Liu,
  • Ruihua Liu,
  • Siping Zhang,
  • Qian Shen,
  • Jing Chen,
  • Huijuan Ma,
  • Changwei Ge,
  • Lidong Hao,
  • Jinshan Zhang and
  • Chaoyou Pang
  • + 1 author

Soil microbes are crucial in shaping the root-associated microbial communities. In this study, we analyzed the effect of the soil–root niche gradient on the diversity, composition, and assembly of the bacterial community and co-occurrence netwo...

  • Article
  • Open Access
3 Citations
2,853 Views
17 Pages

17 November 2022

Agriculture itself has been considered one of the leading reasons for biodiversity loss because of the huge quantity of land dedicated to just this activity, and agricultural intensification has impacted soil organisms at several taxonomic levels. So...

  • Article
  • Open Access
885 Views
16 Pages

Rhizosphere microorganisms mediate the material exchange and chemical cycling between plant roots and soil. However, the response mechanisms of the rhizosphere microbial community, especially its co-occurrence patterns, to thinning remain poorly unde...

  • Article
  • Open Access
2 Citations
1,172 Views
18 Pages

The transition between anaerobic and aerobic conditions represents a fundamental ecological process occurring ubiquitously in both natural ecosystems and engineered wastewater treatment systems. This study investigated the microbial community success...

  • Review
  • Open Access
42 Citations
6,164 Views
25 Pages

3 November 2022

Three-dimensional point cloud has been widely used in the cultural heritage field in the last two decades, gaining attention from both academic and industry communities. A large number of scientific papers have been published concerning this topic, w...

  • Article
  • Open Access
14 Citations
3,794 Views
22 Pages

Although the importance of the soil bacterial community for ecosystem functions has long been recognized, there is still a limited understanding of the associations between its community composition, structure, co-occurrence patterns, and soil physic...

  • Article
  • Open Access
1 Citations
2,242 Views
24 Pages

The rapid development of Internet technology has formed a huge virtual information space. In the information space, information flow has become a link of communication between objects. Information flow is an alternative or supplement to the tradition...

  • Article
  • Open Access
21 Citations
5,661 Views
15 Pages

Detecting microbial interactions is essential to the understanding of the structure and function of the gut microbiome. In this study, microbial co-occurrence patterns were inferred using a random matrix theory based approach in the gut microbiome of...

  • Article
  • Open Access
6 Citations
2,397 Views
32 Pages

The geographic distribution patterns of soil microbial communities associated with cultivated Acanthopanax senticosus plants in Northeast China were investigated. High-throughput sequencing revealed that the diversity and community assembly of bacter...

  • Article
  • Open Access
2 Citations
1,574 Views
18 Pages

17 December 2024

The primary mechanism through which organic amendments enhance the nodulation ability of leguminous crops involves increasing the content of available phosphorus (AP) in the soil. Despite this, the role of plant rhizosphere microbial communities has...

  • Article
  • Open Access
29 Citations
4,439 Views
18 Pages

Tillage practices and residue management are highly important agricultural practices. However, very few studies have examined the influence of tillage practices and residue management on both bacterial and fungal communities and network patterns in c...

  • Article
  • Open Access
732 Views
17 Pages

9 October 2025

Constructed wetlands (CWs) are widely used for ecological restoration, but their microbial assembly mechanisms and ecological functions remain poorly understood, limiting the optimization of restoration strategies. In this study, we investigated foli...

  • Article
  • Open Access
5 Citations
1,192 Views
15 Pages

Salinity Effect on Soil Bacterial and Archaeal Diversity and Assembly in Phragmites australis Salt Marshes in the Qaidam Basin, China

  • Pengcheng Zhu,
  • Yuhui Wang,
  • Wenyi Sheng,
  • Mingyang Yu,
  • Wei Wei,
  • Wenlong Sun,
  • Jian Gao,
  • Zhenwei Xu,
  • Ming Cao and
  • Weihua Guo
  • + 2 authors

Extreme environments foster phylogenetically diverse microorganisms and unique community assembly patterns. Plateau saline marsh lakes represent understudied extreme habitats characterized by dual stressors of high salinity and low temperature. Here,...

  • Article
  • Open Access
1 Citations
1,449 Views
22 Pages

Understanding the maintenance of soil protists within forest ecosystems is crucial for comprehending ecosystem responses to climate change. A comprehensive analysis of soil samples from the Fengtongzhai National Reserve in China, utilizing high-throu...

  • Article
  • Open Access
1 Citations
1,836 Views
14 Pages

Volcanic lakes originate from a volcanic crater or caldera, and were a crucial component of aquatic ecosystems. Sediment bacteria play an important role in the nutrient cycling of aquatic ecosystems; however, their patterns distribution in volcanic l...

  • Article
  • Open Access
6 Citations
2,933 Views
13 Pages

11 April 2022

Planktonic microorganisms in aquatic ecosystems form complex assemblages of highly interactive taxa and play key roles in biogeochemical cycles. However, the microbial interactions within bacterial and microeukaryotic communities, and the mechanisms...

  • Article
  • Open Access
2 Citations
2,048 Views
17 Pages

25 July 2024

Understanding the land use pattern relationships regarding the composition, diversity, and abundance of soil microbial communities in a typical karst depression in southwestern China is crucial for assessing the stability of local karst ecosystems. H...

  • Article
  • Open Access
2 Citations
2,888 Views
14 Pages

Unraveling how microbial interactions and assembly process regulate the rhizosphere abundant and rare taxa is crucial for determining how species diversity affects rhizosphere microbiological functions. We assessed the rare and abundant taxa of rhizo...

  • Communication
  • Open Access
5 Citations
5,084 Views
12 Pages

Rhizosphere Microbiome Co-Occurrence Network Analysis across a Tomato Domestication Gradient

  • Mary M. Dixon,
  • Antisar Afkairin,
  • Daniel K. Manter and
  • Jorge Vivanco

When plant-available phosphorus (P) is lost from a soil solution, it often accumulates in the soil as a pool of unavailable legacy P. To acquire legacy P, plants employ recovery strategies, such as forming associations with soil microbes. However, th...

  • Article
  • Open Access
3,683 Views
22 Pages

16 August 2025

China’s media governance policies play a crucial role in shaping media ecology and promoting the modernization of national governance capacity. This study employed the Latent Dirichlet Allocation (LDA) model and co-occurrence network analysis t...

  • Article
  • Open Access
2 Citations
2,109 Views
21 Pages

This study introduces Fin-ALICE (Artificial Linguistic Intelligence Causal Econometrics), a framework designed to forecast financial time series by integrating multiple analytical approaches including co-occurrence networks, supply chain analysis, an...

  • Article
  • Open Access
48 Citations
7,893 Views
26 Pages

27 March 2020

Technology convergence has become a typical characteristic of innovation, which affects the evolution of industrial structures and the core competitiveness of organizations. However, the existing research has mainly focused on the development of core...

  • Article
  • Open Access
10 Citations
5,059 Views
13 Pages

Natural microbial communities in soils are highly diverse, allowing for rich networks of microbial interactions to unfold. Identifying key players in these networks is difficult as the distribution of microbial diversity at the local scale is typical...

  • Article
  • Open Access
20 Citations
3,423 Views
16 Pages

Both habitats and seasons can determine the dynamics of microbial communities, but the relative importance of different habitats and seasonal changes in shaping the soil bacterial community structures on a small spatial scale in permafrost areas rema...

  • Article
  • Open Access
4 Citations
3,985 Views
12 Pages

Gut Microbial Shifts Indicate Melanoma Presence and Bacterial Interactions in a Murine Model

  • Marco Rossi,
  • Salvatore M. Aspromonte,
  • Frederick J. Kohlhapp,
  • Jenna H. Newman,
  • Alex Lemenze,
  • Russell J. Pepe,
  • Samuel M. DeFina,
  • Nora L. Herzog,
  • Robert Donnelly and
  • Andrew Zloza
  • + 3 authors

Through a multitude of studies, the gut microbiota has been recognized as a significant influencer of both homeostasis and pathophysiology. Certain microbial taxa can even affect treatments such as cancer immunotherapies, including the immune checkpo...

  • Article
  • Open Access
393 Views
25 Pages

21 January 2026

Although biochar and manure have been shown in many studies to influence abundant microbial communities, their differential effects on the rare and abundant microbial communities in soybean–corn intercropping systems remain poorly understood. U...

  • Article
  • Open Access
31 Citations
4,778 Views
19 Pages

Soil Bacterial Community Shifts Are Driven by Soil Nutrient Availability along a Teak Plantation Chronosequence in Tropical Forests in China

  • Zhi Yu,
  • Kunnan Liang,
  • Guihua Huang,
  • Xianbang Wang,
  • Mingping Lin,
  • Yinglong Chen and
  • Zaizhi Zhou

15 December 2021

Soil bacterial communities play crucial roles in ecosystem functions and biogeochemical cycles of fundamental elements and are sensitive to environmental changes. However, the response of soil bacterial communities to chronosequence in tropical ecosy...

  • Article
  • Open Access
1 Citations
1,176 Views
14 Pages

Spatiotemporal Dynamics of Bacterial Community Assembly and Co-Occurrence Patterns in Biological Soil Crusts of Desert Ecosystems

  • Runze Bao,
  • Kai Tang,
  • Yanfu Ji,
  • Shengnan Zhang,
  • Chunying Wang,
  • Yungang Liang,
  • Xiujuan Zhao and
  • Jianyu Meng

Biological soil crusts (BSCs) play a fundamental role in desert ecosystems by stabilizing soil, cycling nutrients, and retaining moisture. However, the assembly processes governing bacterial communities within BSCs remain largely unknown. This study...

of 7