Skip Content
You are currently on the new version of our website. Access the old version .

7,693 Results Found

  • Article
  • Open Access
652 Views
21 Pages

2 September 2025

Rhizosphere microbiota are key drivers of plant nutrition, immunity, and stress tolerance. Abies ziyuanensis L. K. Fu & S. L. Mo (Pinaceae) is an endangered conifer endemic to China, and its persistence may depend on its interactions with its bel...

  • Article
  • Open Access
4 Citations
2,363 Views
17 Pages

Soil bacterial communities play a crucial role in the functioning of estuarine wetlands. Investigating the structure and function of these communities across various wetland types, along with the key factors influencing them, is essential for underst...

  • Article
  • Open Access
19 Citations
3,763 Views
18 Pages

8 March 2022

The biodegradation behavior of municipal solid waste (MSW) depends on the diversity and metabolic function of bacterial communities, which are affected by environmental factors. However, the diversity of the bacterial communities and metabolic functi...

  • Article
  • Open Access
4 Citations
2,150 Views
14 Pages

19 May 2023

The long-term extensive application of chemical fertilizers wreaks havoc on soil bacterial structure and function. To reduce the damage caused by chemical fertilizers, a six-year experiment was performed to study the effects of replacing 0% (CK), 25%...

  • Article
  • Open Access
49 Citations
6,998 Views
16 Pages

17 April 2019

Land-use change from natural to managed agricultural ecosystems significantly impacts soil bacterial diversity and function. The Eastern Free State (EFS) is one of the most productive agricultural regions in South Africa. However, no studies aiming t...

  • Article
  • Open Access
34 Citations
4,577 Views
12 Pages

11 May 2022

Bacterial diversity and community composition are of great importance in wastewater treatment; however, little is known about the diversity and community structure of bacteria in tropical municipal wastewater treatment plants (WWTPs). Therefore, in t...

  • Article
  • Open Access
24 Citations
4,569 Views
17 Pages

Characteristics of Bacterial Community and Function in Paddy Soil Profile around Antimony Mine and Its Response to Antimony and Arsenic Contamination

  • Bocong Huang,
  • Jian Long,
  • Hongkai Liao,
  • Lingfei Liu,
  • Juan Li,
  • Jumei Zhang,
  • Yirong Li,
  • Xian Wang and
  • Rui Yang

Research of bacterial communities and metabolism potential of paddy soils contaminated by antimony (Sb) and arsenic (As) are vital to acquire understanding for their bioremediation. Here, the relative abundance of Sb and As metabolism genes, the dive...

  • Article
  • Open Access
8 Citations
1,770 Views
15 Pages

Characteristics of Bacterial Community Structure and Function in Artificial Soil Prepared Using Red Mud and Phosphogypsum

  • Yong Liu,
  • Zhi Yang,
  • Lishuai Zhang,
  • Hefeng Wan,
  • Fang Deng,
  • Zhiqiang Zhao and
  • Jingfu Wang

The preparation of artificial soil is a potential cooperative resource utilization scheme for red mud and phosphogypsum on a large scale, with a low cost and simple operation. The characteristics of the bacterial community structure and function in t...

  • Article
  • Open Access
4 Citations
2,678 Views
13 Pages

Bacterial Community Composition and Function of Tropical River Ecosystem along the Nandu River on Hainan Island, China

  • Jinbiao Li,
  • Yangni Zhai,
  • Guojian Ge,
  • Yang Xu,
  • Can Wang,
  • Anyong Hu,
  • Yujie Han,
  • Nan Shan,
  • Bo Liu and
  • Wenlin Wang
  • + 1 author

Microorganisms play a pivotal role in nutrient cycling in aquatic ecosystems. Understanding bacterial diversity and its functional composition are crucial for aquatic ecology and protection. We investigated the bacterial community structure using 16S...

  • Article
  • Open Access
901 Views
16 Pages

26 May 2025

Forest fires are one of the significant factors affecting forest ecosystems globally, with their impacts on soil microbial community structure and function drawing considerable attention. This study focuses on the short-term effects of different fire...

  • Article
  • Open Access
2 Citations
1,913 Views
15 Pages

16 May 2024

Elucidating the impact of afforestation on soil bacterial community composition and its potential function in afforestation is imperative for comprehending the biochemical processes of land use change. This study employed high-throughput genomic sequ...

  • Article
  • Open Access
13 Citations
2,290 Views
12 Pages

Coal gangue is a solid waste emitted during coal production. Coal gangue is deployed adjacent to mining land and has characteristics similar to those of the soils of these areas. Coal gangue–soil ecosystems provide habitats for a rich and activ...

  • Article
  • Open Access
14 Citations
5,010 Views
17 Pages

Spatial and Species Variations of Bacterial Community Structure and Putative Function in Seagrass Rhizosphere Sediment

  • Juan Ling,
  • Weiguo Zhou,
  • Qingsong Yang,
  • Jianping Yin,
  • Jian Zhang,
  • Qiuying Peng,
  • Xiaofang Huang,
  • Yuhang Zhang and
  • Junde Dong

20 August 2021

Seagrasses are an important part of the coral reef ecosystem, and their rhizosphere microbes are of great ecological importance. However, variations in diversity, composition, and potential functions of bacterial communities in the seagrass rhizosphe...

  • Article
  • Open Access
14 Citations
4,310 Views
16 Pages

Computational Study on Temperature Driven Structure–Function Relationship of Polysaccharide Producing Bacterial Glycosyl Transferase Enzyme

  • Patricio González-Faune,
  • Ignacio Sánchez-Arévalo,
  • Shrabana Sarkar,
  • Krishnendu Majhi,
  • Rajib Bandopadhyay,
  • Gustavo Cabrera-Barjas,
  • Aleydis Gómez and
  • Aparna Banerjee

28 May 2021

Glycosyltransferase (GTs) is a wide class of enzymes that transfer sugar moiety, playing a key role in the synthesis of bacterial exopolysaccharide (EPS) biopolymer. In recent years, increased demand for bacterial EPSs has been observed in pharmaceut...

  • Article
  • Open Access
600 Views
17 Pages

12 October 2025

Soil degradation and poor fertility severely constrain vegetation growth in urban ecosystems, particularly in compacted and nutrient-depleted tree pits. Mulching has emerged as an effective strategy to improve soil quality and regulate soil–mic...

  • Article
  • Open Access
25 Citations
4,014 Views
24 Pages

Linking Shifts in Bacterial Community Composition and Function with Changes in the Dissolved Organic Matter Pool in Ice-Covered Baiyangdian Lake, Northern China

  • Shilei Zhou,
  • Yue Sun,
  • Minghui Yu,
  • Zhenpeng Shi,
  • Hang Zhang,
  • Ruizhe Peng,
  • Zaixing Li,
  • Jiansheng Cui and
  • Xiao Luo

The relationship between CDOM (Chromophoric dissolved organic matter) and the bacterial community was investigated in ice-covered Baiyangdian Lake. The results showed that environmental parameters significantly differed in Baiyangdian Lake, whereas a...

  • Article
  • Open Access
4 Citations
1,567 Views
18 Pages

Due to the growing focus on daily hygiene practices, sodium dodecyl sulfate (SDS), a widely used surfactant, is increasingly found in domestic sewage and rainfall runoff. Upon entering the lake–terrestrial ecotone, SDS affects the composition,...

  • Article
  • Open Access
2 Citations
1,359 Views
13 Pages

Seaweed is a valuable natural resource, but drift or beach-cast seaweed is considered a waste product. Although seaweed is traditionally used as an organic amendment, vermicomposting has the potential to transform the material into valuable organic f...

  • Article
  • Open Access
6 Citations
2,310 Views
16 Pages

Effects of Functionalized Materials and Bacterial Metabolites on Quality Indicators in Composts

  • Krzysztof Gondek,
  • Piotr Micek,
  • Monika Mierzwa-Hersztek,
  • Jerzy Kowal,
  • Krzysztof Andres,
  • Katarzyna Szczurowska,
  • Marcin Lis and
  • Krzysztof Smoroń

1 December 2022

The addition of functionalized materials (biochar, zeolite, and diatomite) and lyophilized metabolic products of Pseudomonas sp. and Bacillus subtilis to composted biomass may bring many technological and environmental benefits. In this study, we ver...

  • Review
  • Open Access
10 Citations
2,430 Views
15 Pages

Effect of Side-Chain Functional Groups in the Immunogenicity of Bacterial Surface Glycans

  • Guangzong Tian,
  • Chunjun Qin,
  • Jing Hu,
  • Xiaopeng Zou and
  • Jian Yin

16 October 2023

Glycans on the surface of bacteria have diverse and essential biological functions and have widely been employed for treating various bacterial infectious diseases. Furthermore, these glycans comprise various functional groups, such as O-, N-, and ca...

  • Review
  • Open Access
164 Citations
10,917 Views
24 Pages

25 February 2020

Since economic and environmental issues have become critical in the last several years, the amount of sustainable bio-based production has increased. In this article, microbial polysaccharides, including bacterial cellulose (BC), are analyzed as prom...

  • Article
  • Open Access
22 Citations
4,217 Views
20 Pages

Structural and Predicted Functional Diversities of Bacterial Microbiome in Response to Sewage Sludge Amendment in Coastal Mudflat Soil

  • Yunlong Li,
  • Yimin Wang,
  • Chao Shen,
  • Lu Xu,
  • Siqiang Yi,
  • Yilin Zhao,
  • Wengang Zuo,
  • Chuanhui Gu,
  • Yuhua Shan and
  • Yanchao Bai

9 December 2021

The study investigated the influence of sewage sludge application at rates of 0 (CK), 30 (ST), 75 (MT), and 150 (HT) t ha−1 to mudflats on bacterial community diversity and predicted functions using amplicon-based sequencing. Soils under sewage...

  • Review
  • Open Access
12 Citations
1,109 Views
19 Pages

Macrophages represent one of the first lines of host immune defences against the invasion of pathogenic bacteria. Many receptors, immune signalling pathways and cellular processes in macrophages, including Toll-like receptors, Nod-like receptors, pha...

  • Review
  • Open Access
19 Citations
6,285 Views
34 Pages

Extraribosomal Functions of Bacterial Ribosomal Proteins—An Update, 2023

  • Leonid V. Aseev,
  • Ludmila S. Koledinskaya and
  • Irina V. Boni

Ribosomal proteins (r-proteins) are abundant, highly conserved, and multifaceted cellular proteins in all domains of life. Most r-proteins have RNA-binding properties and can form protein–protein contacts. Bacterial r-proteins govern the co-tra...

  • Article
  • Open Access
2 Citations
1,704 Views
27 Pages

Monthly Variation, Environmental Drivers, and Ecological Functions of Marine Bacterial Community in a Eutrophic Coastal Area of China

  • Zezheng Yan,
  • Yanjian Jin,
  • Tiejun Li,
  • Xiaoling Zhang,
  • Qiao Yang,
  • Chengzhe Ren and
  • Ling Qiao

This study investigated the monthly variations of bacterial communities in the surface seawater of the Wenzhou coastal area and their influencing factors, while exploring the ecological functions of microbial communities. The results indicated that t...

  • Article
  • Open Access
17 Citations
4,318 Views
13 Pages

Soil bacteria are important components of forest ecosystems, there compostion structure and functions are sensitive to environmental conditions along elevation gradients. Using 16S rRNA gene amplicon sequencing followed by FAPROTAX function predictio...

  • Article
  • Open Access
8 Citations
3,197 Views
13 Pages

Organic Amendments and Sampling Date Influences on Soil Bacterial Community Composition and Their Predictive Functional Profiles in an Olive Grove Ecosystem

  • Laura L. de Sosa,
  • Beatriz Moreno,
  • Rafael Alcalá Herrera,
  • Marco Panettieri,
  • Engracia Madejón and
  • Emilio Benítez

22 November 2021

A collapse of soil microbial diversity, mainly due to chemical inputs, has been reported to lead to the degradation of conventional agroecosystems. The use of compost from urban and agricultural waste management, in order to achieve a net gain in the...

  • Article
  • Open Access
158 Views
17 Pages

29 January 2026

To investigate the effects of mixed forests on soil bacterial characteristics in the Yellow River Delta, pure forests of Ailanthus altissima, Ulmus pumila, Robinia pseudoacacia, and Fraxinus velutina (hereafter Aa, Up, Rp, and Fv, respectively) and m...

  • Article
  • Open Access
2 Citations
1,445 Views
24 Pages

Qinghai Lake, the largest inland saline lake in China, plays a vital role in wetland carbon cycling. However, the structure and function of soil bacterial communities in its estuarine and nearshore estuarine wetlands remain unclear. This study examin...

  • Review
  • Open Access
28 Citations
8,579 Views
23 Pages

Evolutionary Features in the Structure and Function of Bacterial Toxins

  • Raj Kumar,
  • Thomas M. Feltrup,
  • Roshan V. Kukreja,
  • Kruti B. Patel,
  • Shuowei Cai and
  • Bal Ram Singh

3 January 2019

Toxins can function both as a harmful and therapeutic molecule, depending on their concentrations. The diversity in their function allows us to ask some very pertinent questions related to their origin and roles: (a) What makes them such effective mo...

  • Review
  • Open Access
15 Citations
8,229 Views
30 Pages

Gram-positive bacteria are ancient organisms. Many bacteria, including Gram-positive bacteria, produce toxins to manipulate the host, leading to various diseases. While the targets of Gram-positive bacterial toxins are diverse, many of those toxins u...

  • Article
  • Open Access
51 Citations
5,673 Views
22 Pages

Plant Taxonomic Diversity Better Explains Soil Fungal and Bacterial Diversity than Functional Diversity in Restored Forest Ecosystems

  • Md. Abu Hanif,
  • Zhiming Guo,
  • M. Moniruzzaman,
  • Dan He,
  • Qingshui Yu,
  • Xingquan Rao,
  • Suping Liu,
  • Xiangping Tan and
  • Weijun Shen

6 November 2019

Plant attributes have direct and indirect effects on soil microbes via plant inputs and plant-mediated soil changes. However, whether plant taxonomic and functional diversities can explain the soil microbial diversity of restored forest ecosystems re...

  • Article
  • Open Access
15 Citations
3,683 Views
28 Pages

6 December 2019

The diversity and function of surface soil bacterial community in farmland shelterbelts of five forest types and one abandoned wilderness area were analyzed by collecting 36 soil samples at depths of 0–10 cm (the upper soil layer) and 10–...

  • Review
  • Open Access
10 Citations
1,663 Views
12 Pages

Bacterial histone-like HU proteins are critical to maintenance of the nucleoid structure. In addition, they participate in all DNA-dependent functions, including replication, repair, recombination and gene regulation. In these capacities, their funct...

  • Review
  • Open Access
11 Citations
3,376 Views
29 Pages

Taxonomic Diversity and Functional Traits of Soil Bacterial Communities under Radioactive Contamination: A Review

  • Elena Belykh,
  • Tatiana Maystrenko,
  • Ilya Velegzhaninov,
  • Marina Tavleeva,
  • Elena Rasova and
  • Anna Rybak

Studies investigating the taxonomic diversity and structure of soil bacteria in areas with enhanced radioactive backgrounds have been ongoing for three decades. An analysis of data published from 1996 to 2024 reveals changes in the taxonomic structur...

  • Article
  • Open Access
17 Citations
4,740 Views
18 Pages

The water-level fluctuation zone (WLFZ) is a transitional zone between terrestrial and aquatic ecosystems. Plant communities that are constructed artificially in the WLFZ can absorb and retain nutrients such as nitrogen (N) and phosphorus (P). Howeve...

  • Article
  • Open Access
4 Citations
2,032 Views
16 Pages

High Throughput Sequencing Reveals Distinct Bacterial Communities and Functional Diversity in Two Typical Coastal Bays

  • Liao Ouyang,
  • Xianglan Chen,
  • Wenxuan Zhang,
  • Shuangfei Li,
  • Qiang Huang,
  • Yi Zhang,
  • Chengwei Yan and
  • Shaofeng Li

3 December 2022

The marine waters in semi-enclosed bays are highly dynamic and strongly influenced by different levels of anthropogenic activity. This study explored the bacterial community composition and diversity in two typical urbanized coastal bay areas (Shenzh...

  • Article
  • Open Access
16 Citations
3,651 Views
17 Pages

Effects of Land Reclamation on Soil Bacterial Community and Potential Functions in Bauxite Mining Area

  • Xuesong Li,
  • Zhenjiang Jin,
  • Liyuan Xiong,
  • Lingchen Tong,
  • Hongying Zhu,
  • Xiaowen Zhang and
  • Guangfa Qin

Studying the characteristics of microorganisms in mine reclamation sites can provide a scientific reference basis for mine land reclamation. Soils in the plough layer (0–20 cm) of the bauxite mine plots in Pingguo city, Guangxi Zhuang Autonomou...

  • Article
  • Open Access
7 Citations
3,045 Views
16 Pages

19 December 2023

Controlled-release nitrogen fertilizer (CRNF) has been proven to surpass common urea by mitigating nutrient losses, enhancing soil quality, and improving crop productivity. However, the long-term effects of CRNF on soil biological properties are not...

  • Article
  • Open Access
17 Citations
9,625 Views
17 Pages

Fabrication of Functional Wrinkled Interfaces from Polymer Blends: Role of the Surface Functionality on the Bacterial Adhesion

  • Marta Palacios-Cuesta,
  • Aitziber L. Cortajarena,
  • Olga García and
  • Juan Rodríguez-Hernández

14 November 2014

The generation of nano-microstructured surfaces is a current challenge in polymer science. The fabrication of such surfaces has been accomplished mainly following two different alternatives i.e., by adapting techniques, such as molding (embossing) o...

  • Article
  • Open Access
343 Views
15 Pages

Bacterial Nanocellulose Functionalized with Graphite and Niobium Pentoxide: Limited Antimicrobial Effects and Preserved Cytocompatibility

  • Juliana Silva Ribeiro de Andrade,
  • Adriana Poli Castilho Dugaich,
  • Andressa da Silva Barboza,
  • Maurício Malheiros Badaró,
  • Pedro Henrique Santaliestra e Silva,
  • Tiago Moreira Bastos Campos,
  • Karina Cesca,
  • Debora de Oliveira,
  • Sheila Cristina Stolf and
  • Rafael Guerra Lund

31 December 2025

Chronic wounds remain locked in persistent inflammation with high microbial burden, demanding dressings that suppress infection without sacrificing biocompatibility. Bacterial nanocellulose (BNC) is an attractive matrix due to its biocompatibility, n...

  • Article
  • Open Access
11 Citations
3,157 Views
15 Pages

Reducing management intensity according to the topography of pastures can change the dominant plant species from sown forages to weeds. It is unclear how changes in species dominance in plant community drive spatial variation in soil bacterial commun...

  • Article
  • Open Access
2 Citations
4,099 Views
18 Pages

Impact of Fecal Microbiota Transplant Formulations, Storage Conditions, and Duration on Bacterial Viability, Functionality, and Clinical Outcomes in Patients with Recurrent Clostridioides difficile Infection

  • Mohamed Shaheen,
  • Chelsea McDougall,
  • Leona Chan,
  • Rose Franz,
  • Karen Wong,
  • Ryland T. Giebelhaus,
  • Gwen Nguyen,
  • Seo Lin Nam,
  • A. Paulina de la Mata and
  • Dina Kao
  • + 4 authors

Fecal microbiota transplantation (FMT) is the most effective therapy for preventing recurrent Clostridioides difficile infection (rCDI). However, the impact of FMT formulations and storage conditions on bacterial viability, community structure, funct...

  • Feature Paper
  • Technical Note
  • Open Access
61 Citations
10,991 Views
9 Pages

26 September 2019

Biolog® EcoPlates™ (Biolog Inc., Hayward, CA, USA) were developed to analyse the functional diversity of bacterial communities by means of measuring their ability to oxidize carbon substrates. This technique has been successfully adopted fo...

  • Article
  • Open Access
10 Citations
3,473 Views
18 Pages

Diversity, Community Structure, and Potential Functions of Root-Associated Bacterial Communities of Different Wheat (Triticum aestivum) Cultivars under Field Conditions

  • Jacquelinne J. Acuña,
  • Joaquin I. Rilling,
  • Nitza G. Inostroza,
  • Javiera Manquian,
  • Qian Zhang,
  • Vadakattu V. S. R. Gupta and
  • Milko A. Jorquera

18 May 2023

The wheat (Triticum aestivum) microbiome is essential to its growth and adaptation under the current climatic crisis. Wheat breeding programs are often mainly focused on obtaining more resistant cultivars; thus, plant genotype-by-microbiome interacti...

  • Article
  • Open Access
340 Views
29 Pages

12 January 2026

Arid and semi-arid soils represent extreme habitats where microbial life is constrained by high temperature, low water availability, salinity, and nutrient limitation, yet these ecosystems harbor unique bacterial communities that sustain key ecologic...

  • Article
  • Open Access
4,132 Views
19 Pages

12 August 2024

Assessing bacterial communities across water resources is crucial for understanding ecological dynamics and improving water quality management. This study examines the functional profiles of bacterial communities in drinking water resources in Mega M...

  • Article
  • Open Access
8 Citations
3,392 Views
18 Pages

8 November 2022

The bacterial community in sediment is sensitive to artificial disturbance, and they respond differently to human disturbance, such as changing the nutrient cycling and energy flow in marine ecosystems. However, little is known about the dynamics and...

  • Article
  • Open Access
24 Citations
3,779 Views
14 Pages

Bacterial Adhesion on Dental Polymers as a Function of Manufacturing Techniques

  • Jörg Bächle,
  • Cordula Merle,
  • Sebastian Hahnel and
  • Martin Rosentritt

16 March 2023

The microbiological behavior of dental polymer materials is crucial to secure the clinical success of dental restorations. Here, the manufacturing process and the machining can play a decisive role. This study investigated the bacterial adhesion on d...

  • Article
  • Open Access
5 Citations
3,551 Views
19 Pages

The Tatun Volcanic Group (TVG), located in northern Taiwan, is characterized by acidic hot springs where the outflow of the hot springs may affect the properties of the associated lotic water bodies. We investigated the bacterial diversity and functi...

of 154