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7,491 Results Found

  • Communication
  • Open Access
3,329 Views
18 Pages

8 September 2021

Post-translational modifications (PTMs) are used by organisms to control protein structure and function after protein translation, but their study is complicated and their roles are not often well understood as PTMs are difficult to introduce onto pr...

  • Review
  • Open Access
8 Citations
4,146 Views
19 Pages

10 August 2025

Proteins serve as crucial functional components in food processing, with their unique physicochemical properties directly influencing the texture and stability of food products. Proteins exhibit a range of functional properties, including emulsificat...

  • Article
  • Open Access
30 Citations
3,744 Views
24 Pages

Impacts of Industrial Modification on the Structure and Gel Features of Soy Protein Isolate and its Composite Gel with Myofibrillar Protein

  • Zhaodong Hu,
  • Yichang Wang,
  • Zihan Ma,
  • Tianfu Cheng,
  • Zengwang Guo,
  • Linyi Zhou and
  • Zhongjiang Wang

13 May 2023

Native soy protein isolate (N-SPI) has a low denaturation point and low solubility, limiting its industrial application. The influence of different industrial modification methods (heat (H), alkaline (A), glycosylation (G), and oxidation (O)) on the...

  • Review
  • Open Access
119 Citations
20,360 Views
27 Pages

Tyrosine Sulfation as a Protein Post-Translational Modification

  • Yuh-Shyong Yang,
  • Chen-Chu Wang,
  • Bo-Han Chen,
  • You-Hua Hou,
  • Kuo-Sheng Hung and
  • Yi-Chih Mao

28 January 2015

Integration of inorganic sulfate into biological molecules plays an important role in biological systems and is directly involved in the instigation of diseases. Protein tyrosine sulfation (PTS) is a common post-translational modification that was fi...

  • Article
  • Open Access
4 Citations
4,569 Views
31 Pages

Active Expression of Genes for Protein Modification Enzymes in Habu Venom Glands

  • Akiko Isomoto,
  • Eiichi Shoguchi,
  • Kanako Hisata,
  • Jun Inoue,
  • Yinrui Sun,
  • Kenji Inaba,
  • Noriyuki Satoh,
  • Tomohisa Ogawa and
  • Hiroki Shibata

22 April 2022

Genes encoding snake venom toxins have been studied extensively. However, genes involved in the modification and functioning of venom proteins are little known. Protobothrops is a genus of pit vipers, which are venomous and inhabit the Nansei (Southw...

  • Review
  • Open Access
842 Views
44 Pages

26 December 2025

Protein modifications, particularly post-translational modifications (PTMs) such as phosphorylation and glycosylation, are fundamental mechanisms regulating cellular activity and disease pathogenesis, with their detection emerging as a promising fron...

  • Article
  • Open Access
2 Citations
3,853 Views
10 Pages

Protein Modification Employing Non-Canonical Amino Acids to Prepare SUMOylation Detecting Bioconjugates

  • Alexander C. Williard,
  • Hannah J. Switzer,
  • Christina A. Howard,
  • Rui Yin,
  • Brent L. Russell,
  • Ritwik Sanyal,
  • Shaun Yu,
  • Trinity M. Myers,
  • Brian M. Flood and
  • Douglas D. Young
  • + 1 author

Protein modification with non-canonical amino acids (ncAAs) represents a useful technology to afford homogenous samples of bioconjugates with site-specific modification. This technique can be directly applied to the detection of aberrant SUMOylation...

  • Article
  • Open Access
1 Citations
1,455 Views
15 Pages

Novel Strategies for Yuba Quality Improvement: Protein Modification Based on Physical Fields

  • Wenchao Liu,
  • You Tian,
  • Lijuan Wang,
  • Rui Hu,
  • Yan Zhang,
  • Linlin Li,
  • Weiwei Cao,
  • Xu Duan and
  • Guangyue Ren

18 March 2025

This study investigated the effects of physical field protein modification methods on the mechanical properties, color, rehydration performance, thermal stability, and sensory quality of yuba. The results showed that all three modification methods sh...

  • Article
  • Open Access
21 Citations
6,359 Views
19 Pages

Effect of the Post-Harvest Processing on Protein Modification in Green Coffee Beans by Phenolic Compounds

  • Gustavo A. Figueroa Campos,
  • Johannes G. K. T. Kruizenga,
  • Sorel Tchewonpi Sagu,
  • Steffen Schwarz,
  • Thomas Homann,
  • Andreas Taubert and
  • Harshadrai M. Rawel

8 January 2022

The protein fraction, important for coffee cup quality, is modified during post-harvest treatment prior to roasting. Proteins may interact with phenolic compounds, which constitute the major metabolites of coffee, where the processing affects these i...

  • Article
  • Open Access
2 Citations
2,509 Views
14 Pages

Usage of Cell-Free Protein Synthesis in Post-Translational Modification of μ-Conopeptide PIIIA

  • Yanli Liu,
  • Zitong Zhao,
  • Yunyang Song,
  • Yifeng Yin,
  • Fanghui Wu and
  • Hui Jiang

25 July 2023

The post-translational modifications of conopeptides are the most complicated modifications to date and are well-known and closely related to the activity of conopeptides. The hydroxylation of proline in conopeptides affects folding, structure, and b...

  • Article
  • Open Access
277 Views
15 Pages

Lanthanum Nitrate Modification of Soybean Protein Activated Carbon for Enhanced Fluoride Adsorption

  • Zhengnan Jiang,
  • Guanyu Zhou,
  • Wenchao Bu,
  • Zhenhai Huang and
  • Chunlin He

Water with a high fluoride content poses a serious threat to both public health and the natural environment. To enhance fluoride ion removal efficiency, a modified activated carbon adsorbent (HPAC-La) was synthesized by impregnating soybean protein i...

  • Article
  • Open Access
14 Citations
8,202 Views
16 Pages

Arabidopsis EARLI-type hybrid proline-rich proteins (HyPRPs) consist of a putative N-terminal secretion signal, a proline-rich domain (PRD), and a characteristic eight-cysteine-motif (8-CM). They have been implicated in biotic and abiotic stress resp...

  • Article
  • Open Access
10 Citations
2,776 Views
19 Pages

19 December 2022

Walnut protein is a key plant protein resource due to its high nutritional value, but walnuts are prone to oxidation during storage and processing. This article explored the oxidative modification and digestion mechanism of walnut protein isolates by...

  • Article
  • Open Access
80 Citations
9,440 Views
17 Pages

Development of Environmental Friendly Dust Suppressant Based on the Modification of Soybean Protein Isolate

  • Hu Jin,
  • Wen Nie,
  • Yansong Zhang,
  • Hongkun Wang,
  • Haihan Zhang,
  • Qiu Bao and
  • Jiayi Yan

20 March 2019

Aiming to further improve the dust suppression performance of the dust suppressant, the present study independently develops a new type of biodegradable environmentally-friendly dust suppressant. Specifically, the naturally occurring biodegradable so...

  • Article
  • Open Access
28 Citations
3,847 Views
15 Pages

20 April 2022

Atmospheric cold plasma (ACP), a novel technology, has been widely adopted as an efficient approach in surface modification of the film. The effect of ACP treatment on the physicochemical and structural properties of soy protein film were investigate...

  • Article
  • Open Access
1 Citations
3,331 Views
26 Pages

Post-translational modifications (PTMs) regulate protein function, stability, and interactions, playing essential roles in cellular signaling, localization, and disease mechanisms. Computational approaches enable scalable PTM site prediction; however...

  • Review
  • Open Access
5 Citations
3,192 Views
16 Pages

26 March 2025

Hemp is a multiuse crop used for fiber, food, and medicinal purposes. The seed of hemp has attracted great attention as a good plant protein resource with remarkable nutritional and biological properties. However, the application of hemp seed protein...

  • Review
  • Open Access
4 Citations
3,076 Views
18 Pages

24 July 2023

Most human proteins are modified by enzymes that act on the α-amino group of a newly synthesized polypeptide. Methionine aminopeptidases can remove the initiator methionine and expose the second amino acid for further modification by enzymes responsi...

  • Article
  • Open Access
1 Citations
1,726 Views
12 Pages

BlihIA—A Novel Type I Restriction-Modification System from Bacillus licheniformis Is Sensitive to In Vitro Inhibition by ArdB Antirestriction Protein

  • Anna Kudryavtseva,
  • Rodion Berezov,
  • Anna Utkina,
  • Oksana Kotovskaya,
  • Mikhail Skutel,
  • Anna Trofimova,
  • Artem Isaev and
  • Ilya Manukhov

5 September 2025

Type I restriction-modification (RMI) systems play a crucial role in bacterial defense against mobile elements by distinguishing self and foreign DNA through sequence-specific methylation and cleavage. Here, we characterize BlihIA, a novel RMI system...

  • Review
  • Open Access
237 Citations
15,381 Views
45 Pages

Protein-based films and coatings are an interesting alternative to traditional petroleum-based materials. However, their mechanical and barrier properties need to be enhanced in order to match those of the latter. Physical, chemical, and biochemical...

  • Article
  • Open Access
10 Citations
2,845 Views
13 Pages

Bioactive Compounds and Their Impact on Protein Modification in Human Cells

  • Ankush Prasad,
  • Claudio Rossi,
  • Renuka Ramalingam Manoharan,
  • Michaela Sedlářová,
  • Lorenzo Cangeloni,
  • Deepak Rathi,
  • Gabriella Tamasi,
  • Pavel Pospíšil and
  • Marco Consumi

Reactive oxygen species (ROS) represent a group of molecules with a signaling role that are involved in regulating human cell proliferation and differentiation. Increased ROS concentrations are often associated with the local nonspecific oxidation of...

  • Review
  • Open Access
6 Citations
4,302 Views
23 Pages

The Potential of Fermentation-Based Processing on Protein Modification: A Review

  • Negin Yousefi,
  • Behdad Shokrollahi Yancheshmeh and
  • Krist V. Gernaey

10 October 2025

Proteins are fundamental to food systems due to their structural, nutritional, and functional roles. With increasing consumer awareness of health and sustainability, the demand for protein-rich foods from diverse and eco-friendly sources is rising. F...

  • Feature Paper
  • Review
  • Open Access
13 Citations
5,732 Views
20 Pages

Protein Modifications: From Chemoselective Probes to Novel Biocatalysts

  • Tomás Bohn Pessatti,
  • Hernán Terenzi and
  • Jean Borges Bertoldo

30 November 2021

Chemical reactions can be performed to covalently modify specific residues in proteins. When applied to native enzymes, these chemical modifications can greatly expand the available set of building blocks for the development of biocatalysts. Nucleoph...

  • Review
  • Open Access
15 Citations
6,304 Views
34 Pages

Post-Translational Modifications of Proteins Orchestrate All Hallmarks of Cancer

  • Pathea Shawnae Bruno,
  • Aneeta Arshad,
  • Maria-Raluca Gogu,
  • Natalie Waterman,
  • Rylie Flack,
  • Kimberly Dunn,
  • Costel C. Darie and
  • Anca-Narcisa Neagu

18 January 2025

Post-translational modifications (PTMs) of proteins dynamically build the buffering and adapting interface between oncogenic mutations and environmental stressors, on the one hand, and cancer cell structure, functioning, and behavior. Aberrant PTMs c...

  • Review
  • Open Access
3 Citations
2,709 Views
13 Pages

The Role of Protein Post-Translational Modifications in Fruit Ripening

  • Ting Li,
  • Jing Zeng,
  • Xinquan Yang,
  • Pedro Garcia-Caparros and
  • Xuewu Duan

30 September 2024

Fruit ripening represents a multifaceted biological process intricately controlled by an array of plant hormones, transcription factors, and epigenetic modifications. These regulatory mechanisms are crucial in determining fruit quality and post-harve...

  • Review
  • Open Access
39 Citations
8,665 Views
23 Pages

22 June 2024

This review presents a comprehensive analysis of plant-based proteins from soybeans, pulses, cereals, and pseudo-cereals by examining their structural properties, modification techniques, bioactivities, and applicability in food systems. It addresses...

  • Review
  • Open Access
45 Citations
6,095 Views
13 Pages

29 June 2019

Post-translational modifications (PTM) are chemical changes mostly catalyzed by enzymes that recognize specific target sequences in specific proteins. These modifications play a key role in regulating the folding of proteins, their targeting to speci...

  • Article
  • Open Access
11 Citations
3,738 Views
14 Pages

Profiling of Low-Molecular-Weight Carbonyls and Protein Modifications in Flavored Milk

  • Michele Wölk,
  • Theres Schröter,
  • Ralf Hoffmann and
  • Sanja Milkovska-Stamenova

23 November 2020

Thermal treatments of dairy products favor oxidations, Maillard reactions, and the formation of sugar or lipid oxidation products. Additives including flavorings might enhance these reactions or even induce further reactions. Here we aimed to charact...

  • Article
  • Open Access
11 Citations
3,801 Views
18 Pages

Post-Translational Modification Networks of Contractile and Cellular Stress Response Proteins in Bladder Ischemia

  • Jing-Hua Yang,
  • Han-Pil Choi,
  • Annie Yang,
  • Roya Azad,
  • Fengmei Chen,
  • Zhangsuo Liu and
  • Kazem M. Azadzoi

27 April 2021

Molecular mechanisms underlying bladder dysfunction in ischemia, particularly at the protein and protein modification levels and downstream pathways, remain largely unknown. Here we describe a comparison of protein sequence variations in the ischemic...

  • Review
  • Open Access
22 Citations
9,843 Views
20 Pages

Methods for the Modification and Evaluation of Cereal Proteins for the Substitution of Wheat Gluten in Dough Systems

  • Javier Espinoza-Herrera,
  • Luz María Martínez,
  • Sergio O. Serna-Saldívar and
  • Cristina Chuck-Hernández

8 January 2021

The substitution of wheat gluten in the food industry is a relevant research area because the only known treatment for celiac disease is abstinence from this protein complex. The use of gluten-free cereals in dough systems has demonstrated that the v...

  • Article
  • Open Access
23 Citations
3,087 Views
14 Pages

11 March 2021

The impact of typical primary or secondary lipid oxidation (LPO) products, selected as linoleic acid 13-hydroperoxide (13-HPODE) and malondialdehyde (MDA), on the structural modification of unadsorbed or adsorbed proteins in whey protein isolate (WPI...

  • Communication
  • Open Access
8 Citations
4,949 Views
11 Pages

Unfolded Protein Response Suppression in Yeast by Loss of tRNA Modifications

  • Alexander Bruch,
  • Roland Klassen and
  • Raffael Schaffrath

23 October 2018

Modifications in the anticodon loop of transfer RNAs (tRNAs) have been shown to ensure optimal codon translation rates and prevent protein homeostasis defects that arise in response to translational pausing. Consequently, several yeast mutants lackin...

  • Article
  • Open Access
17 Citations
6,215 Views
22 Pages

20 July 2021

Protein modifications dynamically occur and regulate biological processes in all organisms. Towards understanding the significance of protein modifications in influenza virus infection, we performed a global mass spectrometry screen followed by bioin...

  • Review
  • Open Access
10 Citations
2,947 Views
29 Pages

Male infertility contributes to approximately half of all infertility cases, with most cases associated with oxidative stress. Spermatozoa depend on finely tuned redox signaling for critical processes such as capacitation, motility, and fertilization...

  • Review
  • Open Access
8 Citations
6,544 Views
19 Pages

25 November 2022

Epitranscriptome refers to post-transcriptional modifications to RNA and their associated regulatory factors that can govern changes in an organism’s cells in response to various environmental stimuli. Recent studies have recognized over 170 di...

  • Article
  • Open Access
35 Citations
3,954 Views
15 Pages

Effect of Physical Modifications on Physicochemical and Functional Properties of Walnut Protein

  • Shanshan Li,
  • Zhe Liu,
  • Xue Hei,
  • Chao Wu,
  • Xiaojie Ma,
  • Hui Hu,
  • Bo Jiao,
  • Jinjin Zhu,
  • Benu Adhikari and
  • Aimin Shi
  • + 1 author

9 October 2023

Walnut protein is a high-quality vegetable protein with promising applications in the food industry; however, its potential is hindered by low solubility and associated properties. We utilized various physical modification techniques (cold plasma; ba...

  • Article
  • Open Access
15 Citations
6,285 Views
20 Pages

Super Secondary Structures of Proteins with Post-Translational Modifications in Colon Cancer

  • Dmitry Tikhonov,
  • Liudmila Kulikova,
  • Arthur Kopylov,
  • Kristina Malsagova,
  • Alexander Stepanov,
  • Vladimir Rudnev and
  • Anna Kaysheva

New advances in protein post-translational modifications (PTMs) have revealed a complex layer of regulatory mechanisms through which PTMs control cell signaling and metabolic pathways, contributing to the diverse metabolic phenotypes found in cancer....

  • Review
  • Open Access
3 Citations
1,200 Views
31 Pages

Extraction Techniques and Modification Methods for Regulating the Structural and Functional Properties of Oleosome-Associated Proteins: A Review

  • Yufan Sun,
  • Mingming Zhong,
  • Muhammad Safiullah Virk,
  • Qin Liu,
  • Qiufang Liang,
  • Haile Ma and
  • Xiaofeng Ren

11 November 2025

In recent years, oleosome-associated proteins (OPs) have gained increasing attention in the food and nutrition sectors due to their balanced amino acid composition and excellent functional properties. However, their low extraction yield, high hydroph...

  • Article
  • Open Access
2 Citations
1,916 Views
13 Pages

Exploring Protein Post-Translational Modifications of Breast Cancer Cells Using a Novel Combinatorial Search Algorithm

  • Mariela Vasileva-Slaveva,
  • Angel Yordanov,
  • Gergana Metodieva and
  • Metodi V. Metodiev

13 September 2024

Post-translational modification of proteins plays an important role in cancer cell biology. Proteins encoded by oncogenes may be activated by phosphorylation, products of tumour suppressors might be inactivated by phosphorylation or ubiquitinylation,...

  • Review
  • Open Access
26 Citations
8,950 Views
20 Pages

Interaction of proteins with charged macromolecules is involved in many processes in cells. Firstly, there are many naturally occurred charged polymers such as DNA and RNA, polyphosphates, sulfated glycosaminoglycans, etc., as well as pronouncedly ch...

  • Article
  • Open Access
364 Views
21 Pages

5 February 2026

This study evaluated the effects of atmospheric cold plasma (ACP) treatment duration on the physicochemical and functional properties of hazelnut protein. Proteins were extracted from defatted hazelnut flour and subjected to ACP for 0, 2, 4, 6, and 8...

  • Review
  • Open Access
13 Citations
4,692 Views
23 Pages

4 November 2023

Polyamines participate in the processes of cell growth and development. The degradation branch of their metabolism involves amine oxidases. The oxidation of spermine, spermidine and putrescine releases hydrogen peroxide and the corresponding aminoald...

  • Article
  • Open Access
4,509 Views
11 Pages

Analysis of Differentially Expressed Proteins and Modifications Induced by Formaldehyde Using LC-MS/MS

  • Ranran Liu,
  • Yue Han,
  • Zhiyue Wu,
  • Jianji Zhang,
  • Yong Zang,
  • Lijin Shen,
  • Shanshan Tian and
  • Kai Zhang

Formaldehyde (FA) is a toxic compound that is considered to have a carcinogenic effect due to its damage to biological macromolecules. However, the influence of FA at the protein level remains to be explored. Here, we used LC-MS/MS to identify the di...

  • Article
  • Open Access
14 Citations
9,465 Views
14 Pages

Synthesis of proteins with noncanonical amino acids (ncAAs) enables the creation of protein-based biomaterials with diverse new chemical properties that may be attractive for material science. Current methods for large-scale production of ncAA-contai...

  • Article
  • Open Access
1 Citations
1,740 Views
17 Pages

Clinical and basic research suggests that bladder ischemia may be an independent variable in the development of lower urinary tract symptoms (LUTS). We have reported that ischemic changes in the bladder involve differential expression and post-transl...

  • Review
  • Open Access
40 Citations
6,161 Views
27 Pages

Insights into Cold Plasma Treatment on the Cereal and Legume Proteins Modification: Principle, Mechanism, and Application

  • Bin Li,
  • Lianxin Peng,
  • Yanan Cao,
  • Siyao Liu,
  • Yuchen Zhu,
  • Jianguo Dou,
  • Zhen Yang and
  • Chenguang Zhou

14 May 2024

Cereal and legume proteins, pivotal for human health, significantly influence the quality and stability of processed foods. Despite their importance, the inherent limited functional properties of these natural proteins constrain their utility across...

  • Article
  • Open Access
21 Citations
7,708 Views
24 Pages

Loss of Elongator- and KEOPS-Dependent tRNA Modifications Leads to Severe Growth Phenotypes and Protein Aggregation in Yeast

  • Leticia Pollo-Oliveira,
  • Roland Klassen,
  • Nick Davis,
  • Akif Ciftci,
  • Jo Marie Bacusmo,
  • Maria Martinelli,
  • Michael S. DeMott,
  • Thomas J. Begley,
  • Peter C. Dedon and
  • Valérie de Crécy-Lagard
  • + 1 author

18 February 2020

Modifications found in the Anticodon Stem Loop (ASL) of tRNAs play important roles in regulating translational speed and accuracy. Threonylcarbamoyl adenosine (t6A37) and 5-methoxycarbonyl methyl-2-thiouridine (mcm5s2U34) are critical ASL modificatio...

  • Review
  • Open Access
124 Citations
14,122 Views
30 Pages

The accumulation of abnormal protein aggregates represents a universal hallmark of neurodegenerative diseases (NDDs). Post-translational modifications (PTMs) regulate protein structure and function. Dysregulated PTMs may influence the propensity for...

  • Article
  • Open Access
1 Citations
3,574 Views
13 Pages

Chemical Modification of Cytochrome C for Acid-Responsive Intracellular Apoptotic Protein Delivery for Cancer Eradication

  • Bo Tang,
  • Kwai Man Lau,
  • Yunxin Zhu,
  • Chihao Shao,
  • Wai-Ting Wong,
  • Larry M. C. Chow and
  • Clarence T. T. Wong

Delivering bioactive proteins into cells without carriers presents significant challenges in biomedical applications due to limited cell membrane permeability and the need for targeted delivery. Here, we introduce a novel carrier-free method that add...

  • Review
  • Open Access
17 Citations
16,143 Views
19 Pages

26 January 2024

Plant-based proteins are important macronutrients in the human diet, crucial for cell development in our bodies and for supporting the immune system. Given their nutritional and functional properties, plant-based proteins are excellent candidates for...

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