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392 Results Found

  • Communication
  • Open Access
43 Citations
16,373 Views
14 Pages

The isolation of non-O157 STEC from food samples has proved to be challenging. The selection of a suitable selective isolation agar remains problematic. The purpose of this study was to qualitatively and quantitatively evaluate six chromogenic agar m...

  • Article
  • Open Access
377 Views
14 Pages

19 December 2025

Patulin is a mycotoxin produced mainly by Penicillium expansum on apples. P. expansum is a fruit pathogen that can cause apple soft rot. However, much is unknown about the characteristics of P. expansum and influence of major environmental parameters...

  • Article
  • Open Access
4,113 Views
25 Pages

Mycelium Growth and Development of Psilocybe spp. Mother Cultures on Agar-Based Media

  • Marco Pepe,
  • Mohsen Hesami,
  • Livia Fleishmann,
  • Tom Hsiang and
  • Andrew Maxwell Phineas Jones

13 June 2025

The resurgence of interest in the therapeutic potential of psilocybin-producing mushrooms has recently led to numerous research and commercialization efforts. Due to its ease of cultivation and high potency, Psilocybe is the primary genus of interest...

  • Article
  • Open Access
23 Citations
5,889 Views
13 Pages

Unified Classification of Bacterial Colonies on Different Agar Media Based on Hyperspectral Imaging and Machine Learning

  • Peng Gu,
  • Yao-Ze Feng,
  • Le Zhu,
  • Li-Qin Kong,
  • Xiu-ling Zhang,
  • Sheng Zhang,
  • Shao-Wen Li and
  • Gui-Feng Jia

14 April 2020

A universal method by considering different types of culture media can enable convenient classification of bacterial species. The study combined hyperspectral technology and versatile chemometric algorithms to achieve the rapid and non-destructive cl...

  • Article
  • Open Access
13 Citations
9,313 Views
16 Pages

Performance Testing of Bacillus cereus Chromogenic Agar Media for Improved Detection in Milk and Other Food Samples

  • Eva Fuchs,
  • Christina Raab,
  • Katharina Brugger,
  • Monika Ehling-Schulz,
  • Martin Wagner and
  • Beatrix Stessl

21 January 2022

In this study, the performance of four alternative selective chromogenic B. cereus agar was compared to the reference mannitol-yolk polymyxin (MYP) agar (ISO 7932) using inclusion and exclusion test strains (n = 110) and by analyzing naturally contam...

  • Article
  • Open Access
6 Citations
5,974 Views
14 Pages

The use of film media involves considerably less preparation, waste, and incubator space than conventional agar-media-based assays and has proven in past studies to provide counts of cultivable microbes similar to those of traditional agar media. Fil...

  • Article
  • Open Access
2 Citations
4,355 Views
17 Pages

Accurate antimicrobial susceptibility testing (AST) of cefiderocol remains a diagnostic challenge, especially in infections caused by metallo-β-lactamase (MBL)-producing Klebsiella pneumoniae. While disk diffusion offers a cost-effective alterna...

  • Article
  • Open Access
1 Citations
4,869 Views
13 Pages

Development of Agar Substitute Formulated with Mucilage and Pectin from Opuntia Local Waste Matter for Cattleya sp. Orchids In Vitro Culture Media

  • Arantza Elena Sánchez-Gutiérrez,
  • Genaro Martín Soto-Zarazúa,
  • Beatriz Liliana España-Sánchez,
  • Sarahí Rodríguez-González and
  • Sergio Zamora-Castro

28 February 2023

The technology for reproducing orchids in vitro has had to evolve due to the demand for these plants and the high cost of the biotechnology used due to the agar, the gelling agent. Consequently, research has tended to search for natural substitutes f...

  • Article
  • Open Access
4 Citations
4,148 Views
11 Pages

Comparison of Five Different Selective Agar for the Detection of Vancomycin-Resistant Enterococcus faecium

  • Alessa L. Boschert,
  • Franca Arndt,
  • Axel Hamprecht,
  • Martina Wolke and
  • Sarah V. Walker

Five commercially available selective agar were evaluated regarding sensitivity and specificity to detect vancomycin-resistant Enterococcus (E.) faecium. Altogether 187 E. faecium strains were included, comprising 119 van-carrying strains (phenotypic...

  • Article
  • Open Access
1 Citations
2,098 Views
10 Pages

Optimization of Screening Media to Improve Antimicrobial Biodiscovery from Soils in Undergraduate/Citizen Science Research-Engaged Initiatives

  • Leah McPhillips,
  • John O’Callaghan,
  • Carmel Shortiss,
  • Stephen A. Jackson and
  • Niall D. O’Leary

11 October 2024

Background/Objectives: Research-engaged academic institutions offer the opportunity to couple undergraduate education/citizen science projects with antimicrobial biodiscovery research. Several initiatives reflecting this ethos have been reported inte...

  • Communication
  • Open Access
2 Citations
6,113 Views
12 Pages

Melibiose–X-Gal–MacConkey Agar for Presumptive Differentiation of Escherichia albertii from E. coli and Salmonella from Poultry Meat

  • Samuel D. Annor,
  • Karla S. Salazar,
  • Suresh D. Pillai,
  • Chris R. Kerth,
  • Jason J. Gill and
  • Thomas M. Taylor

The bacterial foodborne enteropathogen Escherichia albertii, despite enjoying increased attention paid to its pathogenesis, global dissemination, and antimicrobial resistance capacity, remains difficult to identify from human foods. The primary objec...

  • Article
  • Open Access
12 Citations
3,449 Views
21 Pages

The Influence of Nasturtium officinale R. Br. Agar and Agitated Microshoot Culture Media on Glucosinolate and Phenolic Acid Production, and Antioxidant Activity

  • Marta Klimek-Szczykutowicz,
  • Agnieszka Szopa,
  • Michał Dziurka,
  • Łukasz Komsta,
  • Michał Tomczyk and
  • Halina Ekiert

21 August 2020

This paper presents an optimization of conditions for microshoot cultures of Nasturtium officinale R. Br. (watercress). Variants of the Murashige and Skoog (MS) medium containing different plant growth regulators (PGRs): cytokinins—BA (6-benzyl...

  • Article
  • Open Access
3 Citations
2,627 Views
15 Pages

13 November 2024

Pullulan is a high-value polysaccharide produced through the fermentation of Aureobasidium pullulans. It has significant applications in the fields of food, medicine, environmental science, and packaging. However, the yield, molecular weight, and oth...

  • Article
  • Open Access
2 Citations
2,270 Views
11 Pages

Assessing Bacterial Viability and Label Accuracy in Human and Poultry Probiotics Sold in the United Kingdom

  • Mostafa Waleed Taha,
  • Danielle J. C. Fenwick,
  • Emma C. L. Marrs and
  • Abdul Shakoor Chaudhry

Accurate label claims are essential for consumer trust in probiotic efficacy, yet limited datasets are available for poultry formulations marketed in the United Kingdom. We quantified and identified the viable bacteria in twelve commercial probiotics...

  • Article
  • Open Access
1 Citations
2,427 Views
10 Pages

Current and emerging legislation in North Carolina and other regions calls for the enumeration of Clostridium perfringens as a surrogate indicator for protozoan parasites in various types of waters. Past studies that have evaluated selective media fo...

  • Article
  • Open Access
1 Citations
1,575 Views
20 Pages

Improved Growth Media for Isolation and Identification of Fish Pathogenic Tenacibaculum spp.

  • Erwan Lagadec,
  • Ingeborg Emilie Berg Kahrs,
  • Kathleen Frisch,
  • Henrik Duesund,
  • Are Nylund and
  • Sverre Bang Småge

Standard blood agar medium with 2% NaCl (BAS) and Marine Agar (MA) are commonly used in bacteriological investigations of winter ulcers in farmed Atlantic salmon (Salmo salar Linnaeus) in Norway and allow easy recovery of Moritella viscosa based on i...

  • Article
  • Open Access
16 Citations
6,943 Views
10 Pages

2 September 2020

Stachybotrys (S.) chartarum had been linked to severe health problems in humans and animals, which occur after exposure to the toxic secondary metabolites of this mold. S. chartarum had been isolated from different environmental sources, ranging from...

  • Article
  • Open Access
4 Citations
4,839 Views
9 Pages

Sensitivity and Selectivity of Two Commercially Available Media for Legionella spp. Recovery from Environmental Water Samples

  • Savina Ditommaso,
  • Monica Giacomuzzi,
  • Gabriele Memoli,
  • Jacopo Garlasco and
  • Carla M. Zotti

The quality control of culture media used for Legionella spp. isolation and enumeration is paramount to achieve a satisfactory degree of comparability among water testing results from different laboratories. Here, we report on a comparative assessmen...

  • Communication
  • Open Access
5 Citations
8,384 Views
9 Pages

Evaluation of a Novel Chromogenic Medium for the Detection of Pseudomonas aeruginosa in Respiratory Samples from Patients with Cystic Fibrosis

  • Thang V. Truong,
  • Alexander Twist,
  • Andrey Zaytsev,
  • Emma C. L. Marrs,
  • Audrey Perry,
  • Graeme Turnbull,
  • Sylvain Orenga,
  • Stephen P. Stanforth and
  • John D. Perry

Pseudomonas aeruginosa is a dominant cause of respiratory infection in individuals with cystic fibrosis (CF), leading to significant morbidity and mortality. Detection of P. aeruginosa is conducted by culture of respiratory samples but this process m...

  • Article
  • Open Access
2 Citations
10,770 Views
16 Pages

Microwave Oven Application for the Preparation and Sterilization of Microbiological Culture Media: A Feasible Method with An Adapted Water Bath and Perforable Cap

  • Ines Terrones-Fernandez,
  • Lourdes Rodero-De-Lamo,
  • Asunción López,
  • Sara Peiró,
  • Daniel Asensio,
  • Robert Castilla,
  • Pedro Javier Gamez-Montero and
  • Nuria Piqué

11 March 2024

There is currently increased interest in the use of alternatives to autoclaved culture media, in order to maintain the properties of the media, while saving energy and time. In this study, we assess a new system for culture media preparation, using a...

  • Article
  • Open Access
22 Citations
13,429 Views
12 Pages

26 December 2020

Culturing is still the most widely used method for determining fungal growth. Thus, is important to identify the most suitable culture media to assess Aspergillus spp. The aim of this study was to analyze data obtained from previous studies, aiming a...

  • Article
  • Open Access
10 Citations
3,123 Views
15 Pages

Loading Rates of Dust and Bioburden in Dwellings in an Inland City of Southern Europe

  • Carla Viegas,
  • Marta Dias,
  • Beatriz Almeida,
  • Estela Vicente,
  • Carla Candeias,
  • Liliana Aranha Caetano,
  • Elisabete Carolino and
  • Célia Alves

13 March 2021

Sampling campaigns indoors have shown that occupants exposed to contaminated air generally exhibit diverse health outcomes. This study intends to assess the deposition rates of total settleable dust and bioburden in the indoor air of dwellings onto q...

  • Article
  • Open Access
12 Citations
4,105 Views
19 Pages

Comparison of Fungal Genera Isolated from Cucumber Plants and Rhizosphere Soil by Using Various Cultural Media

  • Chong-Yang Cheng,
  • Ming-Yuan Zhang,
  • Yong-Chun Niu,
  • Meng Zhang,
  • Yue-Hua Geng and
  • Hui Deng

15 September 2023

Plant endophytic fungi and rhizosphere soil fungi are often reported as biocontrol agents against plant pathogens or with plant growth promotion potential. Four treatments were performed in field and greenhouse experiments where cucumber plants were...

  • Article
  • Open Access
3 Citations
3,603 Views
12 Pages

Studying Soil Ecology and Growth Conditions of Phellorinia herculeana, a Wild Edible Mushroom

  • Rajendiran Oviya,
  • Gunasekaran Sobanbabu,
  • Palaniappan Anbazhagan,
  • Natarajan Revathy,
  • Palani Mahalakshmi,
  • Karunakaran Manonmani,
  • Petchimuthu Mareeswari,
  • Ayyathurai Vijayasamundeeswari,
  • Vellasamy Shanmugaiah and
  • Vellaisamy Ramamoorthy
  • + 1 author

7 September 2022

Phellorinia herculeana is an edible mushroom growing in nutritionally poor and desert soil. There has been little information available about its edaphic and culturing conditions for achieving the vigorous mycelial growth essential for its artificial...

  • Article
  • Open Access
6 Citations
8,007 Views
13 Pages

23 January 2024

The objective of the present report is the dissemination of information acquired during the application of ISO 6579-1:2017 for the isolation of Salmonella spp. from swine samples. ISO 6579-1:2017 is the protocol officially recommended by the EU for t...

  • Article
  • Open Access
19 Citations
3,664 Views
13 Pages

Culturomics Approach to Identify Diabetic Foot Infection Bacteria

  • Michał Złoch,
  • Ewelina Maślak,
  • Wojciech Kupczyk,
  • Marek Jackowski,
  • Paweł Pomastowski and
  • Bogusław Buszewski

3 September 2021

The main goal of the study was to evaluate the usefulness of the culturomics approach in the reflection of diabetic foot infections (DFIs) microbial compositions in Poland. Superficial swab samples of 16 diabetic foot infection patients (Provincial P...

  • Article
  • Open Access
1 Citations
793 Views
3 Pages

30 December 2015

The presence of Alicyclobacillus acidoterrestris endospores in fruit juices is a significant problem for the juice industry since they are able to survive pasteurization subsequently leading to the spoilage. To evaluate the mechanism of wet-heat, str...

  • Article
  • Open Access
2 Citations
4,165 Views
17 Pages

The transfer of microorganisms on packaging materials to a contact surface has only been investigated in the context of laboratory-produced spiked packaging products and agar surfaces in small quantities (0.03–0.10%) so far. Correspondingly, th...

  • Article
  • Open Access
1 Citations
2,106 Views
16 Pages

This study investigated the effect of different culture agar media, derived from Bennett’s medium, on the antimicrobial activity of 15 Streptomyces sp. and 1 Lentzea sp. strains isolated from mining environments. The media were prepared from th...

  • Article
  • Open Access
9 Citations
3,867 Views
16 Pages

Production of Aflatoxin B1 by Aspergillus parasiticus Grown on a Novel Meat-Based Media

  • Iva Zahija,
  • Barbka Jeršek,
  • Lea Demšar,
  • Mateja Lušnic Polak and
  • Tomaž Polak

29 December 2022

The aim of the present study was to develop meat-based media with compositions similar to those of dry-fermented meat products and to evaluate their use in studying the growth of Aspergillus parasiticus and the kinetics of aflatoxin B1 (AFB1) product...

  • Article
  • Open Access
14 Citations
6,252 Views
6 Pages

Evaluation of GVPC and BCYE Media for Legionella Detection and Enumeration in Water Samples by ISO 11731: Does Plating on BCYE Medium Really Improve Yield?

  • Maria Scaturro,
  • Elisa Poznanski,
  • Mariarosaria Mupo,
  • Paola Blasior,
  • Margit Seeber,
  • Anna-Maria Prast,
  • Elisa Romanin,
  • Antonietta Girolamo,
  • Maria Cristina Rota and
  • Alberta Stenico
  • + 2 authors

16 September 2020

Legionella spp are the causative agents of Legionnaires’ diseases, which is a pneumonia of important public health concern. Ubiquitous freshwater and soil inhabitants can reach man-made water systems and cause illness. Legionella enumeration an...

  • Article
  • Open Access
17 Citations
166 Views
5 Pages

Nocardia Isolation from Clinical Samples with the Paraffin Baiting Technique

  • Mehdi Fatahi Bafghi,
  • Parvin Heidarieh,
  • Tahereh Soori,
  • Sasan Saber,
  • Alipasha Meysamie,
  • Khavar Gheitoli,
  • Shadi Habibnia,
  • Masoumeh Rasouli Nasab and
  • Seyyed Saeed Eshraghi

2 March 2015

Background: The genus Nocardia is a cause of infection in the lungs, skin, brain, cerebrospinal fluid, eyes, joints and kidneys. Nocardia isolation from polymicrobial specimens is difficult due to its slow growth. Several methods have been reported f...

  • Article
  • Open Access
6 Citations
3,619 Views
12 Pages

6 October 2021

Pseudomonas aeruginosa is a motile bacterium able to exhibit a social surface behaviour known as swarming motility. Swarming requires the polar flagellum of P. aeruginosa as well as the secretion of wetting agents to ease the spread across the surfac...

  • Article
  • Open Access
3,248 Views
15 Pages

Paenibacillus larvae is a Gram-positive bacterium, the spores of which are the causative agent of the most destructive brood disease of honeybees, American foulbrood (AFB). Obtaining viable spores of pathogen strains is requisite for different studie...

  • Article
  • Open Access
14 Citations
7,131 Views
14 Pages

15 November 2016

Aflatoxin (AF) is a harmful secondary metabolite that is synthesized by the Aspergillus species. Although AF detection techniques have been developed, techniques for detection of AF synthetic fungi are still required. Techniques such as plate culture...

  • Article
  • Open Access
6 Citations
2,941 Views
14 Pages

Several Characteristics of Oidiodendron maius G.L. Barron Important for Heather Plants’ Controlled Mycorrhization

  • Vyacheslav S. Mikheev,
  • Irina V. Struchkova,
  • Ludmila M. Churkina,
  • Anna A. Brilkina and
  • Ekaterina V. Berezina

5 July 2023

Oidiodendron maius G.L. Barron is a recognized fungal species capable of forming ericoid mycorrhiza with various positive effects on host plants; therefore, newly found and previously uncharacterized O. maius strains may be valuable for heather plant...

  • Article
  • Open Access
5 Citations
3,529 Views
10 Pages

Agar Gel as a Non-Invasive Coupling Medium for Reflectance Photoacoustic (PA) Imaging: Experimental Results on Wall-Painting Mock-Ups

  • Antonina Chaban,
  • George J. Tserevelakis,
  • Evgenia Klironomou,
  • Giannis Zacharakis and
  • Jana Striova

30 August 2022

The new reflectance set-up configuration extended the applicability of the photoacoustic (PA) imaging technique to art objects of any thickness and form. Until now, ultrasound gel or distilled water have been necessary as coupling mediums between the...

  • Article
  • Open Access
2,207 Views
15 Pages

Isolation, Antibacterial Activity and Molecular Identification of Avocado Rhizosphere Actinobacteria as Potential Biocontrol Agents of Xanthomonas sp.

  • Jesús Rafael Trinidad-Cruz,
  • Gabriel Rincón-Enríquez,
  • Zahaed Evangelista-Martínez,
  • Luis López-Pérez and
  • Evangelina Esmeralda Quiñones-Aguilar

Actinobacteria, especially the genus Streptomyces, have been shown to be potential biocontrol agents for phytopathogenic bacteria. Bacteria spot disease caused by Xanthomonas spp. may severely affect chili pepper (Capsicum annuum) crops with a s...

  • Article
  • Open Access
3 Citations
2,880 Views
12 Pages

Bacterial Contamination of Environmental Surfaces of Veterinary Rehabilitation Clinics

  • Henry G. Spratt,
  • Nicholas Millis,
  • David Levine,
  • Jenna Brackett and
  • Darryl Millis

27 June 2024

The presence of potentially pathogenic bacteria on veterinary clinic surfaces may be problematic. In this study, we collected swab samples (Fisherbrand, double transport swabs with Stuart’s liquid medium) and water samples from five veterinary...

  • Article
  • Open Access
14 Citations
4,396 Views
13 Pages

Bacterial biofilms are complex microbial communities which are formed on various natural and synthetic surfaces. In contrast to bacteria in their planktonic form, biofilms are characterized by their relatively low susceptibility to anti-microbial tre...

  • Communication
  • Open Access
1 Citations
3,234 Views
9 Pages

4 April 2023

The isoflavone biochanin A was previously shown to promote weight gain in growing steers by selectively inhibiting rumen bacteria-like growth-promoting feed antibiotics. The hypothesis that biochanin A inhibited the action of drug efflux pumps was te...

  • Review
  • Open Access
20 Citations
6,217 Views
10 Pages

Some of the most commonly occurring but difficult to isolate halophilic prokaryotes, Archaea as well as Bacteria, require or prefer pyruvate as carbon and energy source. The most efficient media for the enumeration and isolation of heterotrophic prok...

  • Article
  • Open Access
1,230 Views
15 Pages

Agar/β-Cyclodextrin Composite Cryogels for Controlled Release of Aripiprazole

  • Siyka Stoilova,
  • Georgy L. Georgiev,
  • Rositsa Mihaylova,
  • Bistra Kostova and
  • Petar D. Petrov

25 February 2025

Aripiprazole (ARZ) is an atypical antipsychotic drug used to treat a variety of mood and psychotic disorders, such as schizophrenia, bipolar disorder, major depressive disorder, autism, and Tourette’s syndrome. Although ARZ offers significant t...

  • Article
  • Open Access
17 Citations
4,590 Views
16 Pages

11 August 2021

Fungi associated with macroalgae are less known when compared with those on wood in the marine environment. In this study, we assessed the diversity of fungi associated with the red alga Pterocladiella capillacea at Chao-Jin Park, Keelung, Taiwan. Al...

  • Article
  • Open Access
5 Citations
4,684 Views
9 Pages

The number of reports of Malassezia furfur bloodstream infections is constantly increasing and there is a need for more simple antifungal susceptibility methods for their management. In this study, a total of 39 M. furfur isolates collected from hosp...

  • Article
  • Open Access
10 Citations
8,520 Views
13 Pages

Gram-Negative Bacteria from Organic and Conventional Agriculture in the Hydrographic Basin of Loja: Quality or Pathogen Reservoir?

  • Darío Cruz,
  • Rodrigo Cisneros,
  • Ángel Benítez,
  • Wilson Zúñiga-Sarango,
  • Jhoan Peña,
  • Heriberto Fernández and
  • Andrea Jaramillo

22 November 2021

Organic and conventional agriculture are vital for the development of human society; however, the use of contaminated water and the inappropriate use of organic chemical fertilizers can lead to an increase in the microbial load (potentially pathogeni...

  • Article
  • Open Access
2 Citations
957 Views
17 Pages

This study aims to determine the density of two hydrogel-based media, medium with agar-agar and medium with agar-agar and glucose, which are suitable for both irradiation and bacterial growth, considering the presence or absence of Staphylococcus aur...

  • Article
  • Open Access
1 Citations
1,264 Views
16 Pages

Genetic Basis of Gap Formation Between Migrating Helicobacter pylori Colonies in Soft Agar Assays

  • Yasmine Elshenawi,
  • Skander Hathroubi,
  • Shuai Hu,
  • Xiaolin Liu and
  • Karen M. Ottemann

Helicobacter pylori is a motile bacterial pathogen that causes severe gastric diseases. H. pylori motility and chemotaxis are key colonization factors. Motility and chemotaxis are studied in many microbes, including H. pylori, using soft agar assays....

  • Article
  • Open Access
296 Views
14 Pages

Strain-Dependent Variability in Ochratoxin A Production by Aspergillus spp. Under Different In Vitro Cultivation Conditions

  • Zuzana Barboráková,
  • Dana Tančinová,
  • Juraj Medo,
  • Silvia Jakabová,
  • Georg Häubl,
  • Günther Jaunecker,
  • Zuzana Mašková and
  • Roman Labuda

The aim of this study was to investigate differences in the dynamics of ochratoxin A (OTA) production by various Aspergillus isolates under different cultivation conditions. Nine strains representing A. westerdijkiae, A. ochraceus, A. sulphureus, A. ...

  • Article
  • Open Access
6 Citations
3,676 Views
9 Pages

Antibacterial Effects of X-ray and MRI Contrast Media: An In Vitro Pilot Study

  • Michael P. Brönnimann,
  • Lea Hirzberger,
  • Peter M. Keller and
  • Monika Gsell-Albert

9 February 2023

Some radiological contrast agents have been shown to have effects on bacterial growth. In this study, the antibacterial effect and mechanism of action of iodinated X-ray contrast agents (Ultravist 370, Iopamiro 300, Telebrix Gastro 300 and Visipaque)...

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