Search Results (453)

In clinical decision support systems (CDSSs), where accurate classification of drug–drug interactions (DDIs) can directly affect treatment safety and outcomes, identifying drug interactions is a major challenge, introducing a scalable approach for classifying DDIs utilizing a finely-tuned biomedical language model. The method shown here uses BiomedBERT, a domain-specific version of bidirectional encoder representations from transformers (BERT) that was pre-trained on biomedical literature, to reduce the number of resources needed during fine-tuning. Low-rank adaptation (LoRA) was used to fine-tune the model on the DrugBank dataset. The objective was to classify DDIs into two clinically distinct categories, that is, synergistic and antagonistic interactions. A pseudo-labeling strategy was created to deal with the problem of not having enough labeled data. A curated ground-truth dataset was constructed using polarity-labeled interaction entries from DrugComb and verified DrugBank antagonism pairs. The fine-tuned model is used to figure out what kinds of interactions there are in the rest of the unlabeled data. A checkpointing system saves predictions and confidence scores in small pieces, which means that the process can be continued and is not affected by system crashes. The framework is designed to log every prediction it makes, allowing results to be refined later, either manually or through automated updates, without discarding low-confidence cases, as traditional threshold-based methods often do. The method keeps a record of every output it generates, making it easier to revisit earlier predictions, either by experts or with improved tools, without depending on preset confidence cutoffs. It was built with efficiency in mind, so it can handle large amounts of biomedical text without heavy computational demands. Rather than focusing on model novelty, this research demonstrates how existing biomedical transformers can be adapted to polarity-aware DDI classification with minimal computational overhead, emphasizing deployment feasibility and clinical relevance. Full article

Tribological processes in extreme environments pose serious material challenges, requiring coatings that resist both wear and corrosion. This review summarizes recent advances in protective coatings engineered for extreme environments such as high temperatures, chemically aggressive media, and high-pressure and abrasive domains, as well as cryogenic and space applications. A comprehensive overview of promising coating materials is provided, including ceramic-based coatings, metallic and alloy coatings, and polymer and composite systems, as well as nanostructured and multilayered architectures. These materials are deployed using advanced coating technologies such as thermal spraying (plasma spray, high-velocity oxygen fuel (HVOF), and cold spray), chemical and physical vapor deposition (CVD and PVD), electrochemical methods (electrodeposition), additive manufacturing, and in situ coating approaches. Key degradation mechanisms such as adhesive and abrasive wear, oxidation, hot corrosion, stress corrosion cracking, and tribocorrosion are examined with coating performance. The review also explores application-specific needs in aerospace, marine, energy, biomedical, and mining sectors operating in aggressive physiological environments. Emerging trends in the field are highlighted, including self-healing and smart coatings, environmentally friendly coating technologies, functionally graded and nanostructured coatings, and the integration of machine learning in coating design and optimization. Finally, the review addresses broader considerations such as scalability, cost-effectiveness, long-term durability, maintenance requirements, and environmental regulations. This comprehensive analysis aims to synthesize current knowledge while identifying future directions for innovation in protective coatings for extreme environments. Full article

Data over sound (DoS) is an established technique that has experienced a resurgence in recent years, finding applications in areas such as contactless payments, device pairing, authentication, presence detection, toys, and offline data transfer. This study introduces CardiaWhisper, a system that extends the DoS concept to the medical domain by using a medical data-over-sound (MDoS) framework. CardiaWhisper integrates wearable biomedical sensors with home care systems, edge or IoT gateways, and telemedical networks or cloud platforms. Using a transmitter device, vital signs such as ECG (electrocardiogram) signals, PPG (photoplethysmogram) signals, RR (respiratory rate), and ACC (acceleration/movement) are sensed, conditioned, encoded, and acoustically transmitted to a nearby receiver—typically a smartphone, tablet, or other gadget—and can be further relayed to edge and cloud infrastructures. As a case study, this paper presents the real-time transmission and processing of ECG signals. The transmitter integrates an ECG sensing module, an encoder (either a PLL-based FM modulator chip or a microcontroller), and a sound emitter in the form of a standard piezoelectric speaker. The receiver, in the form of a mobile phone, tablet, or desktop computer, captures the acoustic signal via its built-in microphone and executes software routines to decode the data. It then enables a range of control and visualization functions for both local and remote users. Emphasis is placed on describing the system architecture and its key components, as well as the software methodologies used for signal decoding on the receiver side, where several algorithms are implemented using open-source, platform-independent technologies, such as JavaScript, HTML, and CSS. While the main focus is on the transmission of analog data, digital data transmission is also illustrated. The CardiaWhisper system is evaluated across several performance parameters, including functionality, complexity, speed, noise immunity, power consumption, range, and cost-efficiency. Quantitative measurements of the signal-to-noise ratio (SNR) were performed in various realistic indoor scenarios, including different distances, obstacles, and noise environments. Preliminary results are presented, along with a discussion of design challenges, limitations, and feasible applications. Our experience demonstrates that CardiaWhisper provides a low-power, eco-friendly alternative to traditional RF or Bluetooth-based medical wearables in various applications. Full article

A new, simple machine was developed to address a long-standing challenge in biomedical and mechanical engineering: how to enhance the primary stability and long-term integration of screws and implants in low-density or heterogeneous materials, such as bone or composite substrates. Traditional screws often rely solely on external threading for fixation, leading to limited cohesion, poor integration, or early loosening under cyclic loading. In response to this problem, we designed and built a novel device that leverages a unique mechanical principle to simultaneously perforate, collect, and compact the substrate material during insertion. This mechanism results in an internal material interlock, enhancing cohesion and stability. Drawing upon principles from physics, chemistry, engineering, and biology, we evaluated its biomechanical behavior in synthetic bone analogs. The maximum insertion (MIT) and removal torques (MRT) were measured on synthetic osteoporotic bones using a digital torquemeter, and the values were compared directly. Experimental results demonstrated that removal torque (mean of 21.2 Ncm) consistently exceeded insertion torque (mean of 20.2 Ncm), indicating effective material interlocking and cohesive stabilization. This paper reviews the relevant literature, presents new data, and discusses potential applications in civil infrastructure, aerospace, and energy systems where substrate cohesion is critical. The findings suggest that this new simple machine offers a transformative approach to improving fixation and integration across multiple domains. Full article

This study investigates the ability of six pre-trained sentence transformers to organize medical knowledge by performing unsupervised clustering on 70 high-level Medical Subject Headings (MeSH) terms across seven medical specialties. We evaluated models from different pre-training paradigms: general-purpose, domain-adapted, and from-scratch domain-specific. The results reveal a clear performance hierarchy. A top tier of models, including the general-purpose MPNet and the domain-adapted BioBERT and RoBERTa, produced highly coherent, specialty-aligned clusters (Adjusted Rand Index > 0.80). Conversely, models pre-trained from scratch on specialized corpora, such as PubMedBERT and BioClinicalBERT, performed poorly (Adjusted Rand Index < 0.51), with BioClinicalBERT yielding a disorganized clustering. These findings challenge the assumption that domain-specific pre-training guarantees superior performance for all semantic tasks. We conclude that model architecture, alignment between the pre-training objective and the downstream task, and the nature of the training data are more critical determinants of success for creating semantically coherent embedding spaces for medical concepts. Full article

PAMAM dendrimers are distinguished by their capacity for functionalization, which enhances the properties of the compounds they transport, rendering them highly versatile nanoparticles with extensive applications in the biomedical domain, including drug, vaccine, and gene delivery. These dendrimers can be internalized into cells through various endocytic mechanisms, such as passive diffusion, clathrin-mediated endocytosis, and caveolae-mediated endocytosis, allowing them to traverse the cytoplasm and reach intracellular targets, such as the mitochondria or nucleus. Despite the significant challenge posed by the cytotoxicity of these nanoparticles, which is contingent upon the dendrimer size, surface charge, and generation, numerous strategies have been documented to modify the dendrimer surface using polyethylene glycol and other chemical groups to temporarily mitigate their cytotoxic effects. The potential of PAMAM dendrimers in cancer therapy and other biomedical applications is substantial, owing to their ability to enhance bioavailability, pharmacokinetics, and pharmacodynamics of active ingredients within the body. This underscores the necessity for further investigation into the optimization of internalization pathways and cytotoxicity of these nanoparticles. This review offers a comprehensive synthesis of the current literature on the diverse cellular internalization pathways of PAMAM dendrimers and their cargo molecules, emphasizing the mechanisms of entry, intracellular trafficking, and factors influencing these processes. Full article

In this perspective, we highlight the relevance of the FA-Hippo signaling pathway and its regulation of the Yes-associated protein (YAP) and the transcriptional coactivator with a PDZ-binding domain (TAZ) as main players in the process of implants integration. The modulation and responses of YAP/TAZ triggered by substrate and ECM stiffness are of particular interest in the construction of materials used for medical implants. YAP/TAZ nuclear localization and activity respond to the substrate stiffness by several mechanisms that involve the canonical and non-canonical Hippo signaling and independently of the Hippo cascade. YAP/TAZ regulate the expression of genes involved in several mechanisms of relevance for implant integration such as the proliferation and differentiation of cell precursors and the immune response to the implant. The influence of substrate stiffness on the regulation of the immune response is not completely understood and the progress in this field can contribute to the designing of an adequate implant design. Though the use of nano-biomaterials has been proved to contribute to implant success, the relationship between grain size and stiffness of the material has not been explored in the biomedical field; filling these gaps in the knowledge of biomaterials will highly contribute to the design of biomaterials that could take advantage of the cells sensing and response to the stiffness at the implant interface. Full article

Polymer-based photonic sensors are emerging as cost-effective, scalable alternatives to conventional silicon and glass photonic platforms, offering unique advantages in flexibility, functionality, and manufacturability. This review provides a comprehensive assessment of recent advances in polymer photonic sensing technologies, focusing on material systems, fabrication techniques, device architectures, and application domains. Key polymer materials, including PMMA, SU-8, polyimides, COC, and PDMS, are evaluated for their optical properties, processability, and suitability for integration into sensing platforms. High-throughput fabrication methods such as nanoimprint lithography, soft lithography, roll-to-roll processing, and additive manufacturing are examined for their role in enabling large-area, low-cost device production. Various photonic structures, including planar waveguides, Bragg gratings, photonic crystal slabs, microresonators, and interferometric configurations, are discussed concerning their sensing mechanisms and performance metrics. Practical applications are highlighted in environmental monitoring, biomedical diagnostics, and structural health monitoring. Challenges such as environmental stability, integration with electronic systems, and reproducibility in mass production are critically analyzed. This review also explores future opportunities in hybrid material systems, printable photonics, and wearable sensor arrays. Collectively, these developments position polymer photonic sensors as promising platforms for widespread deployment in smart, connected sensing environments. Full article

Digital holography can capture and reconstruct 3D object information, making it valuable for biomedical imaging and materials science. However, traditional holographic reconstruction methods require the use of phase shift operation in the time or space domain combined with complex computational processes, which, to some extent, limits the range of application areas. The integration of deep learning (DL) advancements with physics-informed methodologies has opened new avenues for tackling this challenge. However, most of the existing DL-based holographic reconstruction methods have high model complexity. In this study, we first design a lightweight model with fewer parameters through the synergy of deep separable convolution and Swish activation function and then employ it as a teacher to distill a smaller student model. By reducing the number of network layers and utilizing knowledge distillation to improve the performance of a simple model, high-quality holographic reconstruction is achieved with only one hologram, greatly reducing the number of parameters in the network model. This distilled lightweight method cuts computational expenses dramatically, with its parameter count representing just 5.4% of the conventional Unet-based method, thereby facilitating efficient holographic reconstruction in settings with limited resources. Full article

Respiratory diseases present significant global health challenges. Recent advances in respiratory sound analysis (RSA) have shown great potential for automated disease diagnosis and patient management. The International Conference on Biomedical and Health Informatics 2017 (ICBHI2017) database stands as one of the most authoritative open-access RSA datasets. This review systematically examines 135 technical publications utilizing the database, and a comprehensive and timely summary of RSA methodologies is offered for researchers and practitioners in this field. Specifically, this review covers signal processing techniques including data resampling, augmentation, normalization, and filtering; feature extraction approaches spanning time-domain, frequency-domain, joint time–frequency analysis, and deep feature representation from pre-trained models; and classification methods for adventitious sound (AS) categorization and pathological state (PS) recognition. Current achievements for AS and PS classification are summarized across studies using official and custom data splits. Despite promising technique advancements, several challenges remain unresolved. These include a severe class imbalance in the dataset, limited exploration of advanced data augmentation techniques and foundation models, a lack of model interpretability, and insufficient generalization studies across clinical settings. Future directions involve multi-modal data fusion, the development of standardized processing workflows, interpretable artificial intelligence, and integration with broader clinical data sources to enhance diagnostic performance and clinical applicability. Full article

Time-domain (TD) diffuse reflectance can be modeled using diffusion theory (DT) to non-invasively estimate optical transport coefficients of biological media, which serve as markers of tissue physiology. We employ an optimized N-layer DT solver in cylindrical geometry to reconstruct optical coefficients of bilayered media from TD reflectance generated via Monte Carlo (MC) simulations. Optical properties for 384 bilayered tissue models representing human head or limb tissues were obtained from the literature at three near-infrared wavelengths. MC data were fit using the layered DT model to simultaneously recover transport coefficients in both layers. Bottom-layer absorption was recovered with errors under 0.02 cm⁻¹, and top-layer scattering was retrieved within 3 cm⁻¹ of input values. In contrast, recovered bottom-layer scattering had mean errors exceeding 50%. Total hemoglobin concentration and oxygen saturation were reconstructed for the bottom layer to within 10 μM and 5%, respectively. Extracted transport coefficients were significantly more accurate when obtained using layered DT compared to the conventional, semi-infinite DT model. Our results suggest using improved theoretical modeling to analyze TD reflectance analysis significantly improves recovery of deep-layer absorption. Full article

Nanozymes constitute a rapidly advancing frontier in scientific research, attracting widespread international interest, particularly for their role in facilitating cascade reactions. Despite their initial discovery a few years ago, significant hurdles persist in optimizing their catalytic performance and substrate specificity—challenges that are especially critical in the context of biomedical diagnostics. Within this domain, nitrogen-containing graphene oxide-based nanozymes exhibiting peroxidase-mimicking activity have emerged as particularly promising candidates, owing to the exceptional electrical conductivity, mechanical flexibility, and structural resilience of reduced graphene oxide-based materials. Intensive efforts have been devoted to engineering graphene oxide structures to enhance their peroxidase-like functionality. Nonetheless, the practical implementation of such nanozymes remains under active investigation and demands further refinement. This review synthesizes the current developments in nitrogen heteroatom-containing graphene oxide nanozymes and their derivative nanozymes, emphasizing recent breakthroughs and biomedical applications. It concludes by exploring prospective directions and the broader potential of these materials in the biomedical landscape. Full article

The separation of respiratory and cardiac sounds is a significant challenge in biomedical signal processing due to their overlapping frequency and time characteristics. Traditional methods struggle with accurate extraction in noisy or diverse clinical environments. This study explores the application of machine learning, particularly convolutional neural networks (CNNs), to overcome these obstacles. Advanced machine learning models, denoising algorithms, and domain adaptation strategies address challenges such as frequency overlap, external noise, and limited labeled datasets. This study presents a robust methodology for detecting heart and lung diseases from audio signals using advanced preprocessing, feature extraction, and deep learning models. The approach integrates adaptive filtering and bandpass filtering as denoising techniques and variational autoencoders (VAEs) for feature extraction. The extracted features are input into a CNN, which classifies audio signals into different heart and lung conditions. The results highlight the potential of this combined approach for early and accurate disease detection, contributing to the development of reliable diagnostic tools for healthcare. Full article

In recent years, cutting-edge technologies, such as artificial intelligence (AI), blockchain, and digital twin (DT), have revolutionized the healthcare sector by enhancing public health and treatment quality through precise diagnosis, preventive measures, and real-time care capabilities. Despite these advancements, the massive amount of generated biomedical data puts substantial challenges associated with information security, privacy, and scalability. Applying blockchain in healthcare-based digital twins ensures data integrity, immutability, consistency, and security, making it a critical component in addressing these challenges. Federated learning (FL) has also emerged as a promising AI technique to enhance privacy and enable decentralized data processing. This paper investigates the integration of digital twin concepts with blockchain and FL in the healthcare domain, focusing on their architecture and applications. It also explores platforms and solutions that leverage these technologies for secure and scalable medical implementations. A case study on federated learning for electroencephalogram (EEG) signal classification is presented, demonstrating its potential as a diagnostic tool for brain activity analysis and neurological disorder detection. Finally, we highlight the key challenges, emerging opportunities, and future directions in advancing healthcare digital twins with blockchain and federated learning, paving the way for a more intelligent, secure, and privacy-preserving medical ecosystem. Full article

Polymers have a wide range of applications in materials science, chemistry, and biomedical domains. Conventional design methods for polymers are mostly event-oriented, directed by intuition, experience, and abstract insights. Nevertheless, they have been effectively utilized to determine several essential materials; these techniques are facing important challenges owing to the great requirement of original materials and the huge design area of organic polymers and molecules. Enhanced and inverse materials design is the best solution to these challenges. With developments in high-performing calculations, artificial intelligence (AI) (particularly Deep learning (DL) and Machine learning (ML))-aided materials design is developing as a promising tool to show development in various domains of materials science and engineering. Several ML and DL methods are established to perform well for polymer classification and detection presently. In this paper, we design and develop a Simplified Molecular Input Line Entry System Based Polymer Property Detection and Classification Using Pareto Optimization Algorithm (SMILES-PPDCPOA) model. This study presents a novel deep learning framework tailored for polymer property classification using SMILES input. By integrating a one-dimensional convolutional neural network (1DCNN) with a gated recurrent unit (GRU) and optimizing the model via Pareto Optimization, the SMILES-PPDCPOA model demonstrates superior classification accuracy and generalization. Unlike existing methods, our model is designed to capture both local substructures and long-range chemical dependencies, offering a scalable and domain-specific solution for polymer informatics. Furthermore, the proposed SMILES-PPDCPOA model executes a one-dimensional convolutional neural network and gated recurrent unit (1DCNN-GRU) technique for the classification process. Finally, the Pareto optimization algorithm (POA) adjusts the hyperparameter values of the 1DCNN-GRU algorithm optimally and results in greater classification performance. Results on a benchmark dataset show that SMILES-PPDCPOA achieves an average classification accuracy of 98.66% (70% Training, 30% Testing) across eight polymer property classes, with high precision and recall metrics. Additionally, it demonstrates superior computational efficiency, completing tasks in 4.97 s, outperforming other established methods such as GCN-LR and ECFP-NN. The experimental validation highlights the potential of SMILES-PPDCPOA in polymer property classification, making it a promising approach for materials science and engineering. The simulation result highlighted the improvement of the SMILES-PPDCPOA system when compared to other existing techniques. Full article