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316 Results Found

  • Review
  • Open Access
4 Citations
5,800 Views
21 Pages

A Visual Compendium of Principal Modifications within the Nucleic Acid Sugar Phosphate Backbone

  • Daria Novikova,
  • Aleksandra Sagaidak,
  • Svetlana Vorona and
  • Vyacheslav Tribulovich

26 June 2024

Nucleic acid chemistry is a huge research area that has received new impetus due to the recent explosive success of oligonucleotide therapy. In order for an oligonucleotide to become clinically effective, its monomeric parts are subjected to modifica...

  • Article
  • Open Access
8 Citations
3,108 Views
16 Pages

Influence of Combinations of Lipophilic and Phosphate Backbone Modifications on Cellular Uptake of Modified Oligonucleotides

  • Timofey D. Zharkov,
  • Oleg V. Markov,
  • Sergey A. Zhukov,
  • Svetlana N. Khodyreva and
  • Maxim S. Kupryushkin

17 January 2024

Numerous types of oligonucleotide modifications have been developed since automated synthesis of DNA/RNA became a common instrument in the creation of synthetic oligonucleotides. Despite the growing number of types of oligonucleotide modifications un...

  • Article
  • Open Access
16 Citations
5,392 Views
11 Pages

10 November 2018

Deficient stability towards nuclease-mediated degradation is one of the most relevant tasks in the development of oligonucleotide-derived biomedical agents. This hurdle can be overcome through modifications to the native oligonucleotide backbone stru...

  • Article
  • Open Access
17 Citations
7,613 Views
20 Pages

Synthesis and Improved Cross-Linking Properties of C5-Modified Furan Bearing PNAs

  • Joke Elskens,
  • Alex Manicardi,
  • Valentina Costi,
  • Annemieke Madder and
  • Roberto Corradini

20 November 2017

Over the past decades, peptide nucleic acid/DNA (PNA:DNA) duplex stability has been improved via backbone modification, often achieved via introducing an amino acid side chain at the α- or γ-position in the PNA sequence. It was previously shown that...

  • Review
  • Open Access
36 Citations
10,905 Views
25 Pages

Non-Canonical Amino Acids as Building Blocks for Peptidomimetics: Structure, Function, and Applications

  • Tarsila G. Castro,
  • Manuel Melle-Franco,
  • Cristina E. A. Sousa,
  • Artur Cavaco-Paulo and
  • João C. Marcos

12 June 2023

This review provides a fresh overview of non-canonical amino acids and their applications in the design of peptidomimetics. Non-canonical amino acids appear widely distributed in nature and are known to enhance the stability of specific secondary str...

  • Review
  • Open Access
25 Citations
6,833 Views
35 Pages

This review covers studies which exploit triazole-modified nucleic acids in the range of chemistry and biology to medicine. The 1,2,3-triazole unit, which is obtained via click chemistry approach, shows valuable and unique properties. For example, it...

  • Article
  • Open Access
12 Citations
3,062 Views
21 Pages

Development of Reduced Peptide Bond Pseudopeptide Michael Acceptors for the Treatment of Human African Trypanosomiasis

  • Santo Previti,
  • Roberta Ettari,
  • Carla Di Chio,
  • Rahul Ravichandran,
  • Marta Bogacz,
  • Ute A. Hellmich,
  • Tanja Schirmeister,
  • Sandro Cosconati and
  • Maria Zappalà

11 June 2022

Human African Trypanosomiasis (HAT) is an endemic protozoan disease widespread in the sub-Saharan region that is caused by T. b. gambiense and T. b. rhodesiense. The development of molecules targeting rhodesain, the main cysteine protease of T. b. rh...

  • Review
  • Open Access
18 Citations
7,639 Views
40 Pages

5 September 2022

Despite various advantages, opioid peptides have been limited in their therapeutic uses due to the main drawbacks in metabolic stability, blood-brain barrier permeability, and bioavailability. Therefore, extensive studies have focused on overcoming t...

  • Review
  • Open Access
54 Citations
10,430 Views
24 Pages

27 December 2012

A peptide nucleic acid (PNA) is a synthetic nucleic acid mimic in which the sugar-phosphate backbone is replaced by a peptide backbone. PNAs hybridize to complementary DNA and RNA with higher affinity and superior sequence selectivity compared to DNA...

  • Article
  • Open Access
14 Citations
8,597 Views
25 Pages

4 November 2014

The RNA interference pathway (RNAi) is a specific and powerful biological process, triggered by small non-coding RNA molecules and involved in gene expression regulation. In this work, we explored the possibility of increasing the biological stabilit...

  • Review
  • Open Access
10 Citations
5,863 Views
16 Pages

15 April 2024

Glycopolymers are functional polymers with saccharide moieties on their side chains and are attractive candidates for biomaterials. Postpolymerization modification can be employed for the synthesis of glycopolymers. Activated esters are useful in var...

  • Article
  • Open Access
3 Citations
2,421 Views
12 Pages

31 January 2023

Traditional macrocyclic molecules encode recognition sites in their structural backbones, which limits the variation of the recognition sites and thus, would restrict the adjustment of recognition properties. Here, we report a new oligoamide-based ma...

  • Article
  • Open Access
6 Citations
4,594 Views
30 Pages

Boosting the Performance of CDCL-Based SAT Solvers by Exploiting Backbones and Backdoors

  • Tasniem Al-Yahya,
  • Mohamed El Bachir Abdelkrim Menai and
  • Hassan Mathkour

26 August 2022

Boolean structural measures were introduced to explain the high performance of conflict-driven clause-learning (CDCL) SAT solvers on industrial SAT instances. Those considered in this study include measures related to backbones and backdoors: backbon...

  • Article
  • Open Access
9 Citations
5,208 Views
20 Pages

TEMPO/TCC as a Chemo Selective Alternative for the Oxidation of Hyaluronic Acid

  • Junwen Shan,
  • Thomas Böck,
  • Thorsten Keller,
  • Leonard Forster,
  • Torsten Blunk,
  • Jürgen Groll and
  • Jörg Teßmar

1 October 2021

Hyaluronic acid (HA)-based hydrogels are very commonly applied as cell carriers for different approaches in regenerative medicine. HA itself is a well-studied biomolecule that originates from the physiological extracellular matrix (ECM) of mammalians...

  • Article
  • Open Access
2 Citations
1,517 Views
13 Pages

Solutions to the Schrödinger Equation: Nonlocal Terms and Geometric Constraints

  • Irina Petreska,
  • Pece Trajanovski,
  • Trifce Sandev,
  • Jonathan A. M. Almeida Rocha,
  • Antonio Sérgio Magalhães de Castro and
  • Ervin K. Lenzi

1 January 2025

Here, we investigate a three-dimensional Schrödinger equation that generalizes the standard framework by incorporating geometric constraints. Specifically, the equation is adapted to account for a backbone structure exhibiting memory effects dependen...

  • Review
  • Open Access
14 Citations
8,971 Views
17 Pages

Versatile Chemical Derivatizations to Design Glycol Chitosan-Based Drug Carriers

  • Sung Eun Kim,
  • Hak-Jun Kim,
  • Jin-Kyu Rhee and
  • Kyeongsoon Park

5 October 2017

Glycol chitosan (GC) and its derivatives have been extensively investigated as safe and effective drug delivery carriers because of their unique physiochemical and biological properties. The reactive functional groups such as the amine and hydroxyl g...

  • Article
  • Open Access
26 Citations
7,809 Views
9 Pages

Phosphine-sulfonate based palladium and nickel catalysts have been extensively studied in ethylene polymerization and copolymerization reactions. Previously, the majority of the research works focused on the modifications of the substituents on the p...

  • Review
  • Open Access
30 Citations
11,853 Views
39 Pages

Nucleic acids play a central role in human biology, making them suitable and attractive tools for therapeutic applications. While conventional drugs generally target proteins and induce transient therapeutic effects, nucleic acid medicines can achiev...

  • Review
  • Open Access
38 Citations
7,913 Views
18 Pages

30 June 2022

The remarkable and unique characteristics of polyglycerols (PG) have made them an attractive candidate for many applications in the biomedical and pharmaceutical fields. The presence of multiple hydroxy groups on the flexible polyether backbone not o...

  • Article
  • Open Access
7 Citations
4,053 Views
18 Pages

Olefin-Metathesis-Derived Norbornene–Ethylene–Vinyl Acetate/Vinyl Alcohol Multiblock Copolymers: Impact of the Copolymer Structure on the Gas Permeation Properties

  • Alexey V. Roenko,
  • Roman Y. Nikiforov,
  • Maria L. Gringolts,
  • Nikolay A. Belov,
  • Yulia I. Denisova,
  • Georgiy A. Shandryuk,
  • Galina N. Bondarenko,
  • Yaroslav V. Kudryavtsev and
  • Eugene S. Finkelshtein

22 January 2022

Commercial metathesis polynorbornene is used for the fabrication of high-damping coatings and bulk materials that dissipate vibration and impact energies. Functionalization of this non-polar polymer can improve its adhesive, gas barrier, and other pr...

  • Article
  • Open Access
4 Citations
6,069 Views
12 Pages

Pyrene-Functionalized Polyacetylenes: Synthesis and Photoluminescence Property

  • Tanxiao Shen,
  • Nan Jiang,
  • Xiao’a Zhang,
  • Lirong He,
  • Xian Hua Lang,
  • Jing Zhi Sun and
  • Hui Zhao

19 August 2019

Four pyrene-functionalized polyacetylenes were designed and prepared through a typical post-polymerization modification route, which is the highly efficient reaction between activated ester and primary anime groups. The chemical structures of the res...

  • Editorial
  • Open Access
1 Citations
2,998 Views
6 Pages

This editorial is a brief introduction to the Special Issue of “Biological Efficacy of Natural and Chemically Modified Products against Oral Inflammatory Lesions”. From the natural resources and chemical modifications of the backbone stru...

  • Review
  • Open Access
78 Citations
11,630 Views
31 Pages

Chitosan Functionalization: Covalent and Non-Covalent Interactions and Their Characterization

  • Laura Nicolle,
  • Céline M. A. Journot and
  • Sandrine Gerber-Lemaire

26 November 2021

Chitosan (CS) is a natural biopolymer that has gained great interest in many research fields due to its promising biocompatibility, biodegradability, and favorable mechanical properties. The versatility of this low-cost polymer allows for a variety o...

  • Article
  • Open Access
3 Citations
3,522 Views
11 Pages

Synthesis of Phosphatidyl Glycerol Containing Unsymmetric Acyl Chains Using H-Phosphonate Methodology

  • Zachary J. Struzik,
  • Shruti Biyani,
  • Tim Grotzer,
  • Judith Storch and
  • David H. Thompson

28 March 2022

Naturally occurring phospholipids, such as phosphatidyl glycerol (PG), are gaining interest due to the roles they play in disease mechanisms. To elucidate the metabolism of PG, an optically pure material is required, but this is unfortunately not com...

  • Article
  • Open Access
2 Citations
2,202 Views
12 Pages

A Biodegradable, Polymer-Supported Oxygen Atom Transfer Reagent

  • Erin E. Ramey,
  • Elizabeth L. Whitman,
  • Cole E. Buller,
  • James R. Tucker,
  • Charles S. Jolly,
  • Kjersti G. Oberle,
  • Austin J. Becksvoort,
  • Mark Turlington and
  • Christopher R. Turlington

26 April 2023

Biodegradable polymers are desirable to mitigate the environmental impact of plastic waste in the environment. Over the past several decades, the development of organocatalytic ring-opening polymerization (OROP) has made the synthesis of many new typ...

  • Article
  • Open Access
3 Citations
4,912 Views
15 Pages

Time Series Foundation Model for Improved Transformer Load Forecasting and Overload Detection

  • Yikai Hou,
  • Chao Ma,
  • Xiang Li,
  • Yinggang Sun,
  • Haining Yu and
  • Zhou Fang

31 January 2025

Simple load forecasting and overload prediction models, such as LSTM and XGBoost, are unable to handle the increasing amount of data in power systems. Recently, various foundation models (FMs) for time series analysis have been proposed, which can be...

  • Article
  • Open Access
6 Citations
3,840 Views
15 Pages

Development of Methods Derived from Iodine-Induced Specific Cleavage for Identification and Quantitation of DNA Phosphorothioate Modifications

  • Sucheng Zhu,
  • Tao Zheng,
  • Lingxin Kong,
  • Jinli Li,
  • Bo Cao,
  • Michael S. DeMott,
  • Yihua Sun,
  • Ying Chen,
  • Zixin Deng and
  • Delin You
  • + 1 author

28 October 2020

DNA phosphorothioate (PT) modification is a novel modification that occurs on the DNA backbone, which refers to a non-bridging phosphate oxygen replaced by sulfur. This exclusive DNA modification widely distributes in bacteria but has not been found...

  • Article
  • Open Access
5 Citations
3,695 Views
17 Pages

Structural Diversity of Peptoids: Tube-Like Structures of Macrocycles

  • Claudine Nicole Herlan,
  • Katharina Sommer,
  • Patrick Weis,
  • Martin Nieger and
  • Stefan Bräse

31 December 2020

Peptoids, or poly-N-substituted glycines, are characterised by broad structural diversity. Compared to peptides, they are less restricted in rotation and lack backbone-derived H bonding. Nevertheless, certain side chains force the peptoid backbone in...

  • Article
  • Open Access
4 Citations
2,269 Views
12 Pages

Fork- and Comb-like Lipophilic Structures: Different Chemical Approaches to the Synthesis of Oligonucleotides with Multiple Dodecyl Residues

  • Timofey D. Zharkov,
  • Ekaterina M. Mironova,
  • Oleg V. Markov,
  • Sergey A. Zhukov,
  • Svetlana N. Khodyreva and
  • Maxim S. Kupryushkin

27 September 2023

Lipophilic oligonucleotide conjugates represent a powerful tool for nucleic acid cellular delivery, and many methods for their synthesis have been developed over the past few decades. In the present study, a number of chemical approaches for the synt...

  • Article
  • Open Access
7 Citations
2,868 Views
13 Pages

19 May 2022

In this work, an Eu3+-MOF-253@Au electrochemiluminescence sensor was successfully constructed for the first time by encapsulating nanogold in the metal–organic frameworks (MOFs) backbone and pore channels, and assembling Eu3+ on the MOF backbon...

  • Feature Paper
  • Article
  • Open Access
3 Citations
2,832 Views
18 Pages

Synthesis and Structural Elucidation of P-stereogenic Coumarins

  • Kamil F. Dziuba,
  • Sławomir Frynas,
  • Anna E. Kozioł and
  • Katarzyna Szwaczko

5 January 2024

This paper presents the general synthesis of a comprehensive group of P-chiral phosphinyl derivatives with a natural coumarin-type motif. A chiral substituent was attached at the third position of the coumarin molecule via the Knoevenagel procedure u...

  • Article
  • Open Access
11 Citations
8,648 Views
17 Pages

Self-Assembled Fluorinated Organogelators for Surface Modification

  • Anilkumar Raghavanpillai and
  • Vincent A. Franco

1 March 2012

A new class of alkyl- and perfluoroalkyl-containing urea and amide derivatives was synthesized from amino acid derivatives. Most of these compounds showed excellent gelation behavior in organic solvents at low concentrations. A few organogelators sel...

  • Article
  • Open Access
5 Citations
2,283 Views
16 Pages

25 November 2022

Marine fouling on concrete has become one of the severest problems that damage the surface and even cause internal corrosion of marine concrete. Dissimilarly to the previous abuse of toxic antifoulants, developing hydrophobic waterborne antifouling m...

  • Article
  • Open Access
16 Citations
3,645 Views
12 Pages

16 November 2019

The mechanical and surface properties of aramid fiber were simultaneously improved by grafting with 1,4-dichlorobutane in supercritical carbon dioxide (scCO2). 1,4-dichlorobutane was penetrated and reacted with heterocyclic an aromatic polyamide back...

  • Review
  • Open Access
36 Citations
8,078 Views
23 Pages

28 June 2022

As a potential replacement for petroleum-based plastics, biodegradable bio-based polymers such as poly(lactic acid) (PLA) have received much attention in recent years. PLA is a biodegradable polymer with major applications in packaging and medicine....

  • Article
  • Open Access
2 Citations
2,864 Views
13 Pages

An artificial leaf is a concept that not only replicates the processes taking place during natural photosynthesis but also provides a source of clean, renewable energy. One important part of such a device are molecules that stabilize the connection b...

  • Article
  • Open Access
19 Citations
3,033 Views
19 Pages

Cascade Network with Deformable Composite Backbone for Formula Detection in Scanned Document Images

  • Khurram Azeem Hashmi,
  • Alain Pagani,
  • Marcus Liwicki,
  • Didier Stricker and
  • Muhammad Zeshan Afzal

19 August 2021

This paper presents a novel architecture for detecting mathematical formulas in document images, which is an important step for reliable information extraction in several domains. Recently, Cascade Mask R-CNN networks have been introduced to solve ob...

  • Article
  • Open Access
6 Citations
3,476 Views
12 Pages

9 January 2019

Linear and nonlinear rheological features and electrical conductivity of two nanocomposite systems based on polypropylene/multiwall carbon nanotubes (PP/MWCNT) are investigated. The nanocomposites were irradiated with an electron beam following two d...

  • Review
  • Open Access
69 Citations
11,293 Views
20 Pages

Nucleic acid aptamers are short RNA- or DNA-based affinity reagents typically selected from combinatorial libraries to bind to a specific target such as a protein, a small molecule, whole cells or even animals. Aptamers have utility in the developmen...

  • Article
  • Open Access
1 Citations
2,446 Views
16 Pages

21 November 2024

Thieno[3,2-b]thiophenes are used as key components in optoelectronic materials, porous hydrogen-storage hosts, organic solar cells, and polymer semiconductors. A step-efficient synthetic protocol was proposed herein for obtaining multisubstituted thi...

  • Feature Paper
  • Article
  • Open Access
5 Citations
2,224 Views
12 Pages

Cell-penetrating peptides (CPPs) are commonly modified to increase their cellular uptake, alter the mechanism of penetration or enhance their endosomal release. Earlier, we described the internalization enhancement ability of the 4-((4-(dimethylamino...

  • Article
  • Open Access
19 Citations
3,535 Views
13 Pages

20 June 2023

The proposed method for tire specification character recognition based on the YOLOv5 network aimed to address the low efficiency and accuracy of the current character recognition methods. The approach involved making three major modifications to the...

  • Article
  • Open Access
3 Citations
1,923 Views
13 Pages

Incorporation of Aramids into Polybenzimidazoles to Achieve Ultra-High Thermoresistance and Toughening Effects

  • Xianzhu Zhong,
  • Aniruddha Nag,
  • Kenji Takada,
  • Akinori Nakajima and
  • Tatsuo Kaneko

28 February 2024

Polybenzimidazoles (PBIs) are recognized for their remarkable thermal stability due to their unique molecular structure, which is characterized by aromaticity and rigidity. Despite their remarkable thermal attributes, their tensile properties limit t...

  • Article
  • Open Access
1 Citations
1,338 Views
15 Pages

Substation Equipment Defect Detection Based on Improved YOLOv8

  • Yiwei Sun,
  • Xiangran Sun,
  • Ying Lin,
  • Yi Yang,
  • Zhuangzhuang Li,
  • Lun Du and
  • Chaojun Shi

28 May 2025

The detection of equipment defects in substations is crucial for maintaining the normal operation of power systems. This paper proposes an object detection algorithm for substation equipment defect detection based on improvements to the YOLOv8 model....

  • Article
  • Open Access
12 Citations
4,316 Views
16 Pages

Directed Synthesis of Humic and Fulvic Derivatives with Enhanced Antioxidant Properties

  • Alexander B. Volikov,
  • Nikita V. Mareev,
  • Andrey I. Konstantinov,
  • Alexandra A. Molodykh,
  • Sofia V. Melnikova,
  • Alina E. Bazhanova,
  • Mikhail E. Gasanov,
  • Evgeny N. Nikolaev,
  • Alexander Ya. Zherebker and
  • Irina V. Perminova
  • + 2 authors

12 October 2021

Redox moieties, which are present in the molecular backbone of humic substances (HS), govern their antioxidant properties. We hypothesized that a directed modification of the humic backbone via incorporation of redox moieties with known redox propert...

  • Article
  • Open Access
6 Citations
3,071 Views
9 Pages

Elastic Flexibility in an Optically Active Naphthalidenimine-Based Single Crystal

  • Torvid Feiler,
  • Adam A. L. Michalchuk,
  • Vincent Schröder,
  • Emil List-Kratochvil,
  • Franziska Emmerling and
  • Biswajit Bhattacharya

16 November 2021

Organic single crystals that combine mechanical flexibility and optical properties are important for developing flexible optical devices, but examples of such crystals remain scarce. Both mechanical flexibility and optical activity depend on the unde...

  • Review
  • Open Access
62 Citations
10,153 Views
23 Pages

15 April 2020

The natural anionic polyelectrolyte alginate and its derivatives are of particular interest for pharmaceutical and biomedical applications. Most interesting for such applications are alginate hydrogels, which can be processed into various shapes, sel...

  • Review
  • Open Access
84 Citations
9,667 Views
23 Pages

13 October 2020

In the last three decades, oligonucleotides have been extensively investigated as probes, molecular ligands and even catalysts within therapeutic and diagnostic applications. The narrow chemical repertoire of natural nucleic acids, however, imposes r...

  • Review
  • Open Access
7 Citations
6,631 Views
17 Pages

Artificial Intelligence Transforming Post-Translational Modification Research

  • Doo Nam Kim,
  • Tianzhixi Yin,
  • Tong Zhang,
  • Alexandria K. Im,
  • John R. Cort,
  • Jordan C. Rozum,
  • David Pollock,
  • Wei-Jun Qian and
  • Song Feng

Post-Translational Modifications (PTMs) are covalent changes to amino acids that occur after protein synthesis, including covalent modifications on side chains and peptide backbones. Many PTMs profoundly impact cellular and molecular functions and st...

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