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982 Results Found

  • Review
  • Open Access
18 Citations
9,305 Views
13 Pages

6 September 2019

HIV protease inhibitors against the viral protease are often hampered by drug resistance mutations in protease and in the viral substrate Gag. To overcome this drug resistance and inhibit viral maturation, targeting Gag alongside protease rather than...

  • Review
  • Open Access
18 Citations
4,657 Views
17 Pages

16 March 2022

HIV-1 viral particle assembly occurs specifically at the plasma membrane and is driven primarily by the viral polyprotein Gag. Selective association of Gag with the plasma membrane is a key step in the viral assembly pathway, which is traditionally a...

  • Review
  • Open Access
46 Citations
12,470 Views
16 Pages

Role of Gag in HIV Resistance to Protease Inhibitors

  • François Clavel and
  • Fabrizio Mammano

5 July 2010

Cleavage of Gag and Gag-Pol precursors by the viral protease is an essential step in the replication cycle of HIV. Protease inhibitors, which compete with natural cleavage sites, strongly impair viral infectivity and have proven to be highly valuable...

  • Article
  • Open Access
11 Citations
4,846 Views
17 Pages

2 January 2020

The pol retrovirus gene encodes required enzymes for virus replication and maturation. Unlike HIV-1 Pol (expressed as a Gag–Pol fusion protein), foamy virus (described as an ancient retrovirus) expresses Pol without forming Gag–Pol polypr...

  • Review
  • Open Access
21 Citations
6,613 Views
15 Pages

Once merely thought of as the protein responsible for the overall physical nature of the human immunodeficiency virus type 1 (HIV-1), the Gag polyprotein has since been elucidated to have several roles in viral replication and functionality. Over the...

  • Article
  • Open Access
4 Citations
4,643 Views
16 Pages

RNA Binding Properties of the Ty1 LTR-Retrotransposon Gag Protein

  • Julita Gumna,
  • Angelika Andrzejewska-Romanowska,
  • David J. Garfinkel and
  • Katarzyna Pachulska-Wieczorek

23 August 2021

A universal feature of retroelement propagation is the formation of distinct nucleoprotein complexes mediated by the Gag capsid protein. The Ty1 retrotransposon Gag protein from Saccharomyces cerevisiae lacks sequence homology with retroviral Gag, bu...

  • Review
  • Open Access
21 Citations
10,824 Views
42 Pages

How HIV-1 Gag Manipulates Its Host Cell Proteins: A Focus on Interactors of the Nucleocapsid Domain

  • Jéromine Klingler,
  • Halina Anton,
  • Eléonore Réal,
  • Manon Zeiger,
  • Christiane Moog,
  • Yves Mély and
  • Emmanuel Boutant

13 August 2020

The human immunodeficiency virus (HIV-1) polyprotein Gag (Group-specific antigen) plays a central role in controlling the late phase of the viral lifecycle. Considered to be only a scaffolding protein for a long time, the structural protein Gag plays...

  • Article
  • Open Access
1,882 Views
14 Pages

Elements in the 5′ Untranslated Region of Viral RNA Important for HIV Gag Recognition and Cross-Packaging

  • Zetao Cheng,
  • Olga A. Nikolaitchik,
  • Alice Duchon,
  • Jonathan M. O. Rawson,
  • Vinay K. Pathak and
  • Wei-Shau Hu

10 April 2025

During retrovirus assembly, Gag packages unspliced viral RNA as the virion genome. Genome packaging is usually specific with occasional exceptions of cross-packaging RNA from distantly related retroviruses. For example, HIV-1 Gag can efficiently pack...

  • Abstract
  • Open Access
1,322 Views
1 Page

Immature HIV virions have a lattice of Gag and Gag-Pol proteins anchored to the lumen of their envelope. This lattice has significant void spaces that were previously characterized by fluorescence correlation spectroscopy, cryoelectron tomography, an...

  • Review
  • Open Access
16 Citations
5,951 Views
26 Pages

Post-Translational Modifications of Retroviral HIV-1 Gag Precursors: An Overview of Their Biological Role

  • Charlotte Bussienne,
  • Roland Marquet,
  • Jean-Christophe Paillart and
  • Serena Bernacchi

Protein post-translational modifications (PTMs) play key roles in eukaryotes since they finely regulate numerous mechanisms used to diversify the protein functions and to modulate their signaling networks. Besides, these chemical modifications also t...

  • Article
  • Open Access
8 Citations
10,018 Views
28 Pages

Mutation of the Highly Conserved Ser-40 of the HIV-1 p6 Gag Protein to Phe Causes the Formation of a Hydrophobic Patch, Enhances Membrane Association, and Polyubiquitination of Gag

  • Friedrich Hahn,
  • Christian Setz,
  • Melanie Friedrich,
  • Pia Rauch,
  • Sara Marie Solbak,
  • Nils Åge Frøystein,
  • Petra Henklein,
  • Jörg Votteler,
  • Torgils Fossen and
  • Ulrich Schubert

2 October 2014

The HIV-1 p6 Gag protein contains two late assembly (l-) domains that recruit proteins of the endosomal sorting complex required for transport (ESCRT) pathway to mediate membrane fission between the nascent virion and the cell membrane. It was recent...

  • Review
  • Open Access
19 Citations
9,258 Views
25 Pages

Acquired Immune Deficiency Syndrome (AIDS) treatment with combination antiretroviral therapy (cART) has improved the life quality of many patients since its implementation. However, resistance mutations and the accumulation of severe side effects ass...

  • Review
  • Open Access
35 Citations
11,213 Views
17 Pages

Regulation of Chemokine Function: The Roles of GAG-Binding and Post-Translational Nitration

  • Sarah Thompson,
  • Beatriz Martínez-Burgo,
  • Krishna Mohan Sepuru,
  • Krishna Rajarathnam,
  • John A. Kirby,
  • Neil S. Sheerin and
  • Simi Ali

The primary function of chemokines is to direct the migration of leukocytes to the site of injury during inflammation. The effects of chemokines are modulated by several means, including binding to G-protein coupled receptors (GPCRs), binding to glyc...

  • Article
  • Open Access
3 Citations
1,554 Views
14 Pages

29 August 2024

The binding of the HIV-1 Gag polyprotein to the plasma membrane is a critical step in viral replication. The association with membranes depends on the lipid composition, but its mechanisms remain unclear. Here, we report the binding of non-myristoyla...

  • Review
  • Open Access
22 Citations
7,009 Views
23 Pages

16 May 2020

Advancement in drug therapies and patient care have drastically improved the mortality rates of HIV-1 infected individuals. Many of these therapies were developed or improved upon by using structure-based techniques, which underscore the importance o...

  • Article
  • Open Access
24 Citations
4,663 Views
26 Pages

HIV-1 Gag Forms Ribonucleoprotein Complexes with Unspliced Viral RNA at Transcription Sites

  • Kevin M. Tuffy,
  • Rebecca J. Kaddis Maldonado,
  • Jordan Chang,
  • Paul Rosenfeld,
  • Alan Cochrane and
  • Leslie J. Parent

9 November 2020

The ability of the retroviral Gag protein of Rous sarcoma virus (RSV) to transiently traffic through the nucleus is well-established and has been implicated in genomic RNA (gRNA) packaging Although other retroviral Gag proteins (human immunodeficienc...

  • Review
  • Open Access
2 Citations
4,209 Views
13 Pages

18 November 2021

The Gag polyprotein is implied in the budding as well as the establishment of the supramolecular architecture of infectious retroviral particles. It is also involved in the early phases of the replication of retroviruses by protecting and transportin...

  • Review
  • Open Access
80 Citations
20,176 Views
19 Pages

The Life-Cycle of the HIV-1 Gag–RNA Complex

  • Elodie Mailler,
  • Serena Bernacchi,
  • Roland Marquet,
  • Jean-Christophe Paillart,
  • Valérie Vivet-Boudou and
  • Redmond P. Smyth

10 September 2016

Human immunodeficiency virus type 1 (HIV-1) replication is a highly regulated process requiring the recruitment of viral and cellular components to the plasma membrane for assembly into infectious particles. This review highlights the recent process...

  • Article
  • Open Access
20 Citations
6,864 Views
19 Pages

Functional Equivalence of Retroviral MA Domains in Facilitating Psi RNA Binding Specificity by Gag

  • Tiffiny Rye-McCurdy,
  • Erik D. Olson,
  • Shuohui Liu,
  • Christiana Binkley,
  • Joshua-Paolo Reyes,
  • Brian R. Thompson,
  • John M. Flanagan,
  • Leslie J. Parent and
  • Karin Musier-Forsyth

19 September 2016

Retroviruses specifically package full-length, dimeric genomic RNA (gRNA) even in the presence of a vast excess of cellular RNA. The “psi” (Ψ) element within the 5′-untranslated region (5′UTR) of gRNA is critical for packaging through interaction wit...

  • Article
  • Open Access
13 Citations
3,411 Views
11 Pages

2 April 2020

Viral genomic RNA is packaged into virions with high specificity and selectivity. However, in vitro the Gag specificity towards viral RNA is obscured when measured in buffers containing physiological salt. Interestingly, when the binding is challenge...

  • Article
  • Open Access
15 Citations
4,858 Views
19 Pages

Significant Differences in RNA Structure Destabilization by HIV-1 Gag∆p6 and NCp7 Proteins

  • Micah J. McCauley,
  • Ioulia Rouzina,
  • Jasmine Li,
  • Megan E. Núñez and
  • Mark C. Williams

25 April 2020

Retroviral nucleocapsid (NC) proteins are nucleic acid chaperones that play distinct roles in the viral life cycle. During reverse transcription, HIV-1 NC facilitates the rearrangement of nucleic acid secondary structures, allowing the transactivatio...

  • Article
  • Open Access
6 Citations
3,956 Views
13 Pages

8 February 2022

The viral polyprotein Gag plays a central role for HIV-1 assembly, release and maturation. Proteolytic processing of Gag by the viral protease is essential for the structural rearrangements that mark the transition from immature to mature, infectious...

  • Article
  • Open Access
6 Citations
5,723 Views
16 Pages

Perturbation of Human T-Cell Leukemia Virus Type 1 Particle Morphology by Differential Gag Co-Packaging

  • José O. Maldonado,
  • Isaac Angert,
  • Sheng Cao,
  • Serkan Berk,
  • Wei Zhang,
  • Joachim D. Mueller and
  • Louis M. Mansky

19 July 2017

Human T-cell leukemia virus type 1 (HTLV-1) is an important cancer-causing human retrovirus that has infected approximately 15 million individuals worldwide. Many aspects of HTLV-1 replication, including virus particle structure and assembly, are poo...

  • Article
  • Open Access
12 Citations
8,492 Views
22 Pages

Glutamic Acid Residues in HIV-1 p6 Regulate Virus Budding and Membrane Association of Gag

  • Melanie Friedrich,
  • Christian Setz,
  • Friedrich Hahn,
  • Alina Matthaei,
  • Kirsten Fraedrich,
  • Pia Rauch,
  • Petra Henklein,
  • Maximilian Traxdorf,
  • Torgils Fossen and
  • Ulrich Schubert

25 April 2016

The HIV-1 Gag p6 protein regulates the final abscission step of nascent virions from the cell membrane by the action of its two late (l-) domains, which recruit Tsg101 and ALIX, components of the ESCRT system. Even though p6 consists of only 52 amino...

  • Article
  • Open Access
2 Citations
3,136 Views
18 Pages

Specific Interaction of DARPin with HIV-1 CANTD Disturbs the Distribution of Gag, RNA Packaging, and Tetraspanin Remodelling in the Membrane

  • Sutpirat Moonmuang,
  • Rawiwan Maniratanachote,
  • Paninee Chetprayoon,
  • Kanokporn Sornsuwan,
  • Weeraya Thongkum,
  • Koollawat Chupradit and
  • Chatchai Tayapiwatana

15 April 2022

A designed repeat scaffold protein (AnkGAG1D4) recognizing the human immunodeficiency virus-1 (HIV-1) capsid (CA) was formerly established with antiviral assembly. Here, we investigated the molecular mechanism of AnkGAG1D4 function during the late st...

  • Review
  • Open Access
24 Citations
12,173 Views
29 Pages

Nuclear Trafficking of Retroviral RNAs and Gag Proteins during Late Steps of Replication

  • Matthew S. Stake,
  • Darrin V. Bann,
  • Rebecca J. Kaddis and
  • Leslie J. Parent

18 November 2013

Retroviruses exploit nuclear trafficking machinery at several distinct stages in their replication cycles. In this review, we will focus primarily on nucleocytoplasmic trafficking events that occur after the completion of reverse transcription and pr...

  • Article
  • Open Access
8 Citations
3,841 Views
15 Pages

15 April 2020

The ESCRT-I factor Tsg101 is essential for sorting endocytic cargo and is exploited by viral pathogens to facilitate egress from cells. Both the nucleocapsid (NC) domain and p6 domain in HIV-1 Gag contribute to recruitment of the protein. However, th...

  • Review
  • Open Access
15 Citations
7,567 Views
17 Pages

28 August 2013

The HIV/AIDS epidemic remains a global health problem, especially in Sub-Saharan Africa. An effective HIV-1 vaccine is therefore badly required to mitigate this ever-expanding problem. Since HIV-1 infects its host through the mucosal surface, a vac...

  • Protocol
  • Open Access
3 Citations
12,141 Views
9 Pages

Background: Gagging during transesophageal echocardiography examination (TEE) can be distressing and even dangerous for patients. The needling of acupuncture point CV24 was described to be effective in reducing the gag reflex during TEE in patients w...

  • Article
  • Open Access
1 Citations
2,511 Views
13 Pages

20 November 2023

Human T-cell tropic virus type 1 (HTLV-1) is known to be mainly transmitted by cell-to-cell contact due to the lower infectivity of the cell-free virion. However, the reasons why cell-free HTLV-1 infection is poor remain unknown. In this study, we fo...

  • Review
  • Open Access
11 Citations
5,282 Views
16 Pages

16 May 2018

Feline immunodeficiency virus (FIV) is an important cat pathogen worldwide whose biological and pathophysiological properties resemble those of human immunodeficiency virus type 1 (HIV-1). Therefore, the study of FIV not only benefits its natural hos...

  • Article
  • Open Access
2 Citations
4,081 Views
11 Pages

15 December 2021

An increasing number of patients in Africa are experiencing virological failure on a second-line antiretroviral protease inhibitor (PI)-containing regimen, even without resistance-associated mutations in the protease region, suggesting a potential ro...

  • Communication
  • Open Access
1 Citations
1,549 Views
11 Pages

20 June 2025

LTR retrotransposons are widespread genomic elements that significantly impact genome structure and function. In Arabidopsis thaliana, the EVD LTR retrotransposon encodes a GAG protein essential for retrotransposon particle assembly. Here, we present...

  • Article
  • Open Access
3 Citations
4,066 Views
14 Pages

HIV-1 Gag-Pol Sequences from Ugandan Early Infections Reveal Sequence Variants Associated with Elevated Replication Capacity

  • Anne Kapaata,
  • Sheila N. Balinda,
  • Rui Xu,
  • Maria G. Salazar,
  • Kimberly Herard,
  • Kelsie Brooks,
  • Kato Laban,
  • Jonathan Hare,
  • Dario Dilernia and
  • Pontiano Kaleebu
  • + 8 authors

23 January 2021

The ability to efficiently establish a new infection is a critical property for human immunodeficiency virus type 1 (HIV-1). Although the envelope protein of the virus plays an essential role in receptor binding and internalization of the infecting v...

  • Review
  • Open Access
22 Citations
11,175 Views
15 Pages

9 August 2013

The development of vaccines to treat and prevent human immunodeficiency virus (HIV) infection has been hampered by an incomplete understanding of “protective” immune responses against HIV. Natural control of HIV-1 infection is associated with T-cell...

  • Article
  • Open Access
7 Citations
3,935 Views
14 Pages

4 September 2019

The capsid domain (CA) of the lentiviral Gag polyproteins has two distinct roles during virion morphogenesis. As a domain of Gag, it mediates the Gag–Gag interactions that drive immature particle assembly, whereas as a mature protein, it self-a...

  • Article
  • Open Access
3 Citations
2,864 Views
21 Pages

Upstream of N-Ras (Unr/CSDE1) Interacts with NCp7 and Gag, Modulating HIV-1 IRES-Mediated Translation Initiation

  • Nedal Taha,
  • Sarwat Zgheib,
  • Kamal Kant Sharma,
  • Nicolas Humbert,
  • Emmanuel Boutant,
  • Pascal Didier,
  • Yves Mély and
  • Eleonore Real

17 August 2022

The Human Immunodeficiency Virus-1 (HIV-1) nucleocapsid protein (NC) as a mature protein or as a domain of the Gag precursor plays important roles in the early and late phases of the infection. To better understand its roles, we searched for new cell...

  • Review
  • Open Access
5 Citations
4,077 Views
20 Pages

5 February 2022

Retroviruses must selectively recognize their unspliced RNA genome (gRNA) among abundant cellular and spliced viral RNAs to assemble into newly formed viral particles. Retroviral gRNA packaging is governed by Gag precursors that also orchestrate all...

  • Article
  • Open Access
3 Citations
3,142 Views
10 Pages

11 June 2019

We determined the earliest full-length HIV-1 gag gene sequences in 110 patients with HIV-1, including 20 hemophiliacs (HPs) and 90 local controls (LCs). The gag gene from stored sera was amplified using RT-PCR, and was subjected to direct sequencing....

  • Article
  • Open Access
2 Citations
3,528 Views
18 Pages

Gag-Gag Interactions Are Insufficient to Fully Stabilize and Order the Immature HIV Gag Lattice

  • Ipsita Saha,
  • Benjamin Preece,
  • Abby Peterson,
  • Haley Durden,
  • Brian MacArthur,
  • Jake Lowe,
  • David Belnap,
  • Michael Vershinin and
  • Saveez Saffarian

28 September 2021

Immature HIV virions harbor a lattice of Gag molecules with significant ordering in CA-NTD, CA-CTD and SP1 regions. This ordering plays a major role during HIV maturation. To test the condition in which the Gag lattice forms in vivo, we assembled vir...

  • Article
  • Open Access
21 Citations
5,485 Views
19 Pages

A Four-Step Purification Process for Gag VLPs: From Culture Supernatant to High-Purity Lyophilized Particles

  • Irene González-Domínguez,
  • Elianet Lorenzo,
  • Alice Bernier,
  • Laura Cervera,
  • Francesc Gòdia and
  • Amine Kamen

9 October 2021

Gag-based virus-like particles (VLPs) have high potential as scaffolds for the development of chimeric vaccines and delivery strategies. The production of purified preparations that can be preserved independently from cold chains is highly desirable...

  • Article
  • Open Access
3 Citations
3,508 Views
17 Pages

Antiretroviral Drug-Resistance Mutations on the Gag Gene: Mutation Dynamics during Analytic Treatment Interruption among Individuals Experiencing Virologic Failure

  • James R. Hunter,
  • Domingos E. Matos dos Santos,
  • Patricia Munerato,
  • Luiz Mario Janini,
  • Adauto Castelo,
  • Maria Cecilia Sucupira,
  • Hong-Ha M. Truong and
  • Ricardo Sobhie Diaz

We describe drug-resistance mutation dynamics of the gag gene among individuals under antiretroviral virologic failure who underwent analytical treatment interruption (ATI). These mutations occur in and around the cleavage sites that form the particl...

  • Article
  • Open Access
212 Views
12 Pages

Force Metrics During the Boyle–Davis Gag in Children Undergoing Adenotonsillectomy

  • Enriqueta Arevalo Asensio,
  • Anelise Schifino Wolmeister,
  • Thomas Engelhardt,
  • Sam J. Daniel,
  • Samuel D. F. Wasserman and
  • Gianluca Bertolizio

28 February 2026

Background: In adults, the forces generated during Boyle–Davis Gag suspension correlate with postoperative pain, but no data are available in pediatrics. This study investigates the force metrics and postoperative opioid consumption, pain, emer...

  • Article
  • Open Access
1 Citations
3,290 Views
14 Pages

27 March 2020

The Rous sarcoma virus Gag polyprotein transiently traffics through the nucleus, which is required for efficient incorporation of the viral genomic RNA (gRNA) into virus particles. Packaging of gRNA is mediated by two zinc knuckles and basic residues...

  • Article
  • Open Access
5 Citations
6,815 Views
12 Pages

Feline immunodeficiency virus (FIV) infection results in viral persistence, a prolonged asymptomatic phase, and progressive immunopathology. During the asymptomatic phase, a cohort of experimentally FIV-infected cats exhibits features of viral latenc...

  • Article
  • Open Access
9 Citations
3,069 Views
16 Pages

Identification of New L-Heptanoylphosphatidyl Inositol Pentakisphosphate Derivatives Targeting the Interaction with HIV-1 Gag by Molecular Modelling Studies

  • Halilibrahim Ciftci,
  • Belgin Sever,
  • Esra Ayan,
  • Mustafa Can,
  • Hasan DeMirci,
  • Masami Otsuka,
  • Amaç Fatih TuYuN,
  • Hiroshi Tateishi and
  • Mikako Fujita

12 October 2022

The HIV-1 Gag protein binds to the host cell membrane and assembles into immature particles. Then, in the course of immature virion budding, activated protease cleaves Gag into its main components: MA, CA, NC, and p6 proteins. The highly basic residu...

  • Article
  • Open Access
7 Citations
3,810 Views
16 Pages

Broad-Spectrum Antiviral Activity of an Ankyrin Repeat Protein on Viral Assembly against Chimeric NL4-3 Viruses Carrying Gag/PR Derived from Circulating Strains among Northern Thai Patients

  • Supachai Sakkhachornphop,
  • Sudarat Hadpech,
  • Tanchanok Wisitponchai,
  • Chansunee Panto,
  • Doungnapa Kantamala,
  • Utaiwan Utaipat,
  • Jutarat Praparattanapan,
  • Wilai Kotarathitithum,
  • Sineenart Taejaroenkul and
  • Chatchai Tayapiwatana
  • + 5 authors

13 November 2018

Certain proteins have demonstrated proficient human immunodeficiency virus (HIV-1) life cycle disturbance. Recently, the ankyrin repeat protein targeting the HIV-1 capsid, AnkGAG1D4, showed a negative effect on the viral assembly of the HIV-1NL4-3 la...

  • Article
  • Open Access
11 Citations
6,965 Views
16 Pages

31 December 2020

While drug resistant mutations in HIV-1 are largely credited to its error prone HIV-1 RT, the time point in the infection cycle that these mutations can arise and if they appear spontaneously without selection pressures both remained enigmatic. Many...

  • Article
  • Open Access
4 Citations
2,999 Views
19 Pages

The Lifespan of D. melanogaster Depends on the Function of the Gagr Gene, a Domesticated gag Gene of Drosophila LTR Retrotransposons

  • Yevgenia Balakireva,
  • Maria Nikitina,
  • Pavel Makhnovskii,
  • Inna Kukushkina,
  • Ilya Kuzmin,
  • Alexander Kim and
  • Lidia Nefedova

17 January 2024

(1) Background: The Gagr gene in Drosophila melanogaster’s genome originated from the molecular domestication of retrotransposons and retroviruses’ gag gene. In all Drosophila species, the Gagr protein homologs exhibit a conserved structu...

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