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1,565 Results Found

  • Review
  • Open Access
39 Citations
10,839 Views
14 Pages

15 September 2021

Enzymes underpin the processes required for most biotransformations. However, natural enzymes are often not optimal for biotechnological uses and must be engineered for improved activity, specificity and stability. A rich and growing variety of wet-l...

  • Review
  • Open Access
26 Citations
3,984 Views
19 Pages

Enzyme-Triggered Crosslinked Hybrid Hydrogels for Bone Tissue Engineering

  • Ankur Sood,
  • Seong Min Ji,
  • Anuj Kumar and
  • Sung Soo Han

14 September 2022

The quest to develop state-of-the-art hydrogels for bone tissue engineering has accompanied substantial innovation and significant progression in the field of bioactive hydrogels. Still, there is scope for advancement in this cell-friendly and biocom...

  • Review
  • Open Access
22 Citations
6,314 Views
17 Pages

3 April 2022

Carbon dioxide is a major greenhouse gas, and its fixation and transformation are receiving increasing attention. Biofixation of CO2 is an eco–friendly and efficient way to reduce CO2, and six natural CO2 fixation pathways have been identified...

  • Review
  • Open Access
8 Citations
4,542 Views
18 Pages

30 January 2022

During the fracture stimulation of oil and gas wells, fracturing fluids are used to create fractures and transport the proppant into the fractured reservoirs. The fracturing fluid viscosity is responsible for proppant suspension, the viscosity can be...

  • Review
  • Open Access
3 Citations
3,084 Views
39 Pages

22 December 2025

Enzyme engineering drives innovation in biotechnology, medicine, and industry, yet conventional approaches remain limited by labour-intensive workflows, high costs, and narrow sequence diversity. Artificial intelligence (AI) is revolutionising this f...

  • Article
  • Open Access
1 Citations
1,366 Views
12 Pages

Engineering Malic Enzyme CO2 Fixation Activity via a Structure–Sequence–SCANNER (3S) Co-Evolution Strategy

  • Jianping Shi,
  • Mingdong Wang,
  • Ting Feng,
  • Xianglong Li,
  • Yanbin Feng and
  • Song Xue

18 August 2025

Enzymatic CO2 fixation offers great potential for the sustainable synthesis of value-added compounds. Malic enzyme (ME) catalyzes the reverse carboxylation of pyruvate to malate, enabling direct CO2 conversion into C4 compounds with broad biosyntheti...

  • Article
  • Open Access
44 Citations
6,630 Views
24 Pages

3D Printing of Cellulase-Laden Cellulose Nanofiber/Chitosan Hydrogel Composites: Towards Tissue Engineering Functional Biomaterials with Enzyme-Mediated Biodegradation

  • Arnaud Kamdem Tamo,
  • Tuan Anh Tran,
  • Ingo Doench,
  • Shaghayegh Jahangir,
  • Aastha Lall,
  • Laurent David,
  • Carlos Peniche-Covas,
  • Andreas Walther and
  • Anayancy Osorio-Madrazo

1 September 2022

The 3D printing of a multifunctional hydrogel biomaterial with bioactivity for tissue engineering, good mechanical properties and a biodegradability mediated by free and encapsulated cellulase was proposed. Bioinks of cellulase-laden and cellulose na...

  • Review
  • Open Access
99 Citations
15,126 Views
19 Pages

Enzyme Engineering for In Situ Immobilization

  • Fabian B. H. Rehm,
  • Shuxiong Chen and
  • Bernd H. A. Rehm

14 October 2016

Enzymes are used as biocatalysts in a vast range of industrial applications. Immobilization of enzymes to solid supports or their self-assembly into insoluble particles enhances their applicability by strongly improving properties such as stability i...

  • Review
  • Open Access
9 Citations
10,590 Views
31 Pages

Enzymes as Catalysts in Industrial Biocatalysis: Advances in Engineering, Applications, and Sustainable Integration

  • Mohd Farhan,
  • Ibrahim W. Hasani,
  • Doaa S. R. Khafaga,
  • Waleed Mahmoud Ragab,
  • Raisa Nazir Ahmed Kazi,
  • Mohammad Aatif,
  • Ghazala Muteeb and
  • Yosri A. Fahim

16 September 2025

Enzymes are highly selective and efficient biological catalysts that play a critical role in modern industrial biocatalysis. Their ability to operate under mild conditions and reduce environmental impact makes them ideal alternatives to conventional...

  • Review
  • Open Access
3 Citations
6,383 Views
16 Pages

11 April 2025

Cytochrome P450 enzymes (CYPs) are versatile heme-containing monooxygenases involved in the metabolism of endogenous and exogenous compounds, as well as natural product biosynthesis. Their ability to catalyze regio- and stereoselective oxidation reac...

  • Article
  • Open Access
1 Citations
2,502 Views
11 Pages

Electrochemical Impedance Spectroscopy for the Sensing of the Kinetic Parameters of Engineered Enzymes

  • Adriána Dusíková,
  • Timea Baranová,
  • Ján Krahulec,
  • Olívia Dakošová,
  • Ján Híveš,
  • Monika Naumowicz and
  • Miroslav Gál

20 April 2024

The study presents a promising approach to enzymatic kinetics using Electrochemical Impedance Spectroscopy (EIS) to assess fundamental parameters of modified enteropeptidases. Traditional methods for determining these parameters, while effective, oft...

  • Feature Paper
  • Article
  • Open Access
8 Citations
4,349 Views
15 Pages

23 May 2021

Cytochrome P450 (CYP) mediated enzymatic hydroxylation of fatty acids present a green alternative to chemical synthesis of hydroxy fatty acids (HFAs), which are high-value oleochemicals with various uses in materials industry and medical field. Altho...

  • Review
  • Open Access
36 Citations
14,480 Views
37 Pages

Enzyme Engineering: Performance Optimization, Novel Sources, and Applications in the Food Industry

  • Shucan Mao,
  • Jiawen Jiang,
  • Ke Xiong,
  • Yiqiang Chen,
  • Yuyang Yao,
  • Linchang Liu,
  • Hanbing Liu and
  • Xiang Li

28 November 2024

This review summarizes the latest progress in enzyme preparation, including enzyme design and modification technology, exploration of new enzyme sources, and application of enzyme preparation in food processing, detection, and preservation. The direc...

  • Article
  • Open Access
5 Citations
2,078 Views
17 Pages

The Protein Engineering of Zearalenone Hydrolase Results in a Shift in the pH Optimum of the Relative Activity of the Enzyme

  • Anna Dotsenko,
  • Igor Sinelnikov,
  • Ivan Zorov,
  • Yury Denisenko,
  • Aleksandra Rozhkova and
  • Larisa Shcherbakova

13 December 2024

An acidic shift in the pH profile of Clonostachys rosea zearalenone hydrolase (ZHD), the most effective and well-studied zearalenone-specific lactone hydrolase, is required to extend the range of applications for the enzyme as a decontamination agent...

  • Feature Paper
  • Review
  • Open Access
10 Citations
3,325 Views
19 Pages

Strategies to Use Nanofiber Scaffolds as Enzyme-Based Biocatalysts in Tissue Engineering Applications

  • Taha Umair Wani,
  • Anjum Hamid Rather,
  • Rumysa Saleem Khan,
  • Mushtaq A. Beigh,
  • Mira Park,
  • Bishweshwar Pant and
  • Faheem A. Sheikh

22 April 2021

Nanofibers are considered versatile materials with remarkable potential in tissue engineering and regeneration. In addition to their extracellular matrix-mimicking properties, nanofibers can be functionalized with specific moieties (e.g., antimicrobi...

  • Article
  • Open Access
3 Citations
664 Views
15 Pages

29 November 2025

Nanogels provide unique opportunities for stabilizing fragile enzymes through soft, hydrated polymer networks. Here, we report the development of a glutathione peroxidase (GPx)-loaded nanogel (GPxNG) engineered via a mild “grafting-to” ep...

  • Communication
  • Open Access
6 Citations
3,533 Views
14 Pages

Surface Engineering of Escherichia coli to Display Its Phytase (AppA) and Functional Analysis of Enzyme Activities

  • Patricia L. A. Muñoz-Muñoz,
  • Celina Terán-Ramírez,
  • Rosa E. Mares-Alejandre,
  • Ariana B. Márquez-González,
  • Pablo A. Madero-Ayala,
  • Samuel G. Meléndez-López and
  • Marco A. Ramos-Ibarra

Escherichia coli phytase (AppA) is widely used as an exogenous enzyme in monogastric animal feed mainly because of its ability to degrade phytic acid or its salt (phytate), a natural source of phosphorus. Currently, successful recombinant production...

  • Article
  • Open Access
2 Citations
3,131 Views
14 Pages

Engineering the Activity of Old Yellow Enzyme NemR-PS for Efficient Reduction of (E/Z)-Citral to (S)-Citronellol

  • Binbin Feng,
  • Xia Li,
  • Lijun Jin,
  • Yi Wang,
  • Yi Tang,
  • Yuhao Hua,
  • Chenze Lu,
  • Jie Sun,
  • Yinjun Zhang and
  • Xiangxian Ying

9 June 2022

The cascade catalysis of old yellow enzyme, alcohol dehydrogenase and glucose dehydrogenase has become a promising approach for one pot, two-step reduction of (E/Z)-citral to (S)-citronellol, serving as a chiral alcohol with rose fragrance. During th...

  • Review
  • Open Access
16 Citations
5,833 Views
19 Pages

Possibilities of Using De Novo Design for Generating Diverse Functional Food Enzymes

  • Xinglong Wang,
  • Kangjie Xu,
  • Yameng Tan,
  • Song Liu and
  • Jingwen Zhou

14 February 2023

Food enzymes have an important role in the improvement of certain food characteristics, such as texture improvement, elimination of toxins and allergens, production of carbohydrates, enhancing flavor/appearance characteristics. Recently, along with t...

  • Article
  • Open Access
21 Citations
6,459 Views
15 Pages

Engineering the Enantioselectivity of Yeast Old Yellow Enzyme OYE2y in Asymmetric Reduction of (E/Z)-Citral to (R)-Citronellal

  • Xiangxian Ying,
  • Shihua Yu,
  • Meijuan Huang,
  • Ran Wei,
  • Shumin Meng,
  • Feng Cheng,
  • Meilan Yu,
  • Meirong Ying,
  • Man Zhao and
  • Zhao Wang

18 March 2019

The members of the Old Yellow Enzyme (OYE) family are capable of catalyzing the asymmetric reduction of (E/Z)-citral to (R)-citronellal—a key intermediate in the synthesis of L-menthol. The applications of OYE-mediated biotransformation are usu...

  • Review
  • Open Access
9 Citations
4,137 Views
17 Pages

17 November 2021

Microbes are routinely engineered to synthesize high-value chemicals from renewable materials through synthetic biology and metabolic engineering. Microbial biosynthesis often relies on expression of heterologous biosynthetic pathways, i.e., enzymes...

  • Article
  • Open Access
1,410 Views
16 Pages

16 July 2025

The relationship between protein structure and function is intrinsically interconnected, as the structure of a protein directly determines its functional properties. To investigate the effects of temperature and pressure on protein function, this stu...

  • Feature Paper
  • Review
  • Open Access
29 Citations
7,493 Views
26 Pages

Machine Learning: A Suitable Method for Biocatalysis

  • Pedro Sousa Sampaio and
  • Pedro Fernandes

1 June 2023

Biocatalysis is currently a workhorse used to produce a wide array of compounds, from bulk to fine chemicals, in a green and sustainable manner. The success of biocatalysis is largely thanks to an enlargement of the feasible chemical reaction toolbox...

  • Review
  • Open Access
150 Citations
22,852 Views
23 Pages

Agro-Industrial Food Waste as a Low-Cost Substrate for Sustainable Production of Industrial Enzymes: A Critical Review

  • Vishal Sharma,
  • Mei-Ling Tsai,
  • Parushi Nargotra,
  • Chiu-Wen Chen,
  • Chia-Hung Kuo,
  • Pei-Pei Sun and
  • Cheng-Di Dong

5 November 2022

The grave environmental, social, and economic concerns over the unprecedented exploitation of non-renewable energy resources have drawn the attention of policy makers and research organizations towards the sustainable use of agro-industrial food and...

  • Review
  • Open Access
2,441 Views
16 Pages

Molecular Evolution and Adaptation Strategies in Marine Ciliates: An Inspiration for Cold-Adapted Enzyme Engineering and Drug Binding Analysis

  • Sandra Pucciarelli,
  • Matteo Mozzicafreddo,
  • Alberto Vassallo,
  • Angela Piersanti and
  • Cristina Miceli

4 November 2024

In the present review, we summarize genome mining of genomic data obtained from the psychrophilic Antarctic marine ciliate Euplotes focardii and its evolutionary-close mesophilic cosmopolitan counterpart E. crassus. This analysis highlights adaptatio...

  • Feature Paper
  • Review
  • Open Access
14 Citations
9,715 Views
36 Pages

4 February 2025

Protein engineering has emerged as a transformative field in industrial biotechnology, enabling the optimization of enzymes to meet stringent industrial demands for stability, specificity, and efficiency. This review explores the principles and metho...

  • Review
  • Open Access
10 Citations
11,435 Views
38 Pages

Inflammation is a multifaceted biological response of the immune system against various harmful stimuli, including pathogens (such as bacteria and viruses), cellular damage, toxins, and natural/synthetic irritants. This protective mechanism is essent...

  • Article
  • Open Access
12 Citations
4,572 Views
11 Pages

Halogenation of Peptides and Proteins Using Engineered Tryptophan Halogenase Enzymes

  • Barindra Sana,
  • Ding Ke,
  • Eunice Hui Yen Li,
  • Timothy Ho,
  • Jayasree Seayad,
  • Hung A. Duong and
  • Farid J. Ghadessy

8 December 2022

Halogenation of bioactive peptides via incorporation of non-natural amino acid derivatives during chemical synthesis is a common strategy to enhance functionality. Bacterial tyrptophan halogenases efficiently catalyze regiospecific halogenation of th...

  • Article
  • Open Access
2 Citations
928 Views
13 Pages

Synergistic Engineering of the Twin-Arginine Translocation (Tat) Pathway and Membrane Capacity Enhances Extracellular Production of Amylosucrase in Bacillus licheniformis

  • Caizhe Wang,
  • Dandan Niu,
  • Yongqing Zhou,
  • Hui Liu,
  • Nokuthula Peace Mchunu,
  • Meng Zhang,
  • Suren Singh and
  • Zhengxiang Wang

Amylosucrase (AS) is a highly versatile enzyme with significant potential for industrial applications, including functional food production and glycosylation of bioactive compounds. However, its large-scale production is hampered by low secretion eff...

  • Review
  • Open Access
4 Citations
6,412 Views
36 Pages

The growing demand for efficient, selective, and stable enzymes has fueled advancements in computational enzyme engineering, a field that complements experimental methods to accelerate enzyme discovery. With a plethora of software and tools available...

  • Review
  • Open Access
16 Citations
5,375 Views
23 Pages

Integrating Computational Design and Experimental Approaches for Next-Generation Biologics

  • Ahrum Son,
  • Jongham Park,
  • Woojin Kim,
  • Wonseok Lee,
  • Yoonki Yoon,
  • Jaeho Ji and
  • Hyunsoo Kim

27 August 2024

Therapeutic protein engineering has revolutionized medicine by enabling the development of highly specific and potent treatments for a wide range of diseases. This review examines recent advances in computational and experimental approaches for engin...

  • Review
  • Open Access
33 Citations
6,355 Views
34 Pages

β-N-Acetylhexosaminidases for Carbohydrate Synthesis via Trans-Glycosylation

  • Jan Muschiol,
  • Marlene Vuillemin,
  • Anne S. Meyer and
  • Birgitte Zeuner

29 March 2020

β-N-acetylhexosaminidases (EC 3.2.1.52) are retaining hydrolases of glycoside hydrolase family 20 (GH20). These enzymes catalyze hydrolysis of terminal, non-reducing N-acetylhexosamine residues, notably N-acetylglucosamine or N-acetylgalactosami...

  • Review
  • Open Access
20 Citations
14,048 Views
37 Pages

9 April 2025

Microbial enzymes have revolutionised the textile industry by replacing harmful chemicals with eco-friendly alternatives, enhancing processes such as desizing, scouring, dyeing, finishing, and promoting water conservation while reducing pollution. Th...

  • Review
  • Open Access
41 Citations
11,233 Views
20 Pages

5 December 2019

The introduction of a halogen atom into a small molecule can effectively modulate its properties, yielding bioactive substances of agrochemical and pharmaceutical interest. Consequently, the development of selective halogenation strategies is of high...

  • Review
  • Open Access
17 Citations
6,440 Views
12 Pages

Polyketides are a diverse set of natural products with versatile applications as pharmaceuticals, nutraceuticals, and cosmetics, to name a few. Of several types of polyketides, aromatic polyketides comprising type II and III polyketides contain many...

  • Review
  • Open Access
62 Citations
17,430 Views
17 Pages

Bioengineered Enzymes and Precision Fermentation in the Food Industry

  • Fatma Boukid,
  • Seedhabadee Ganeshan,
  • Yingxin Wang,
  • Mehmet Çağlar Tülbek and
  • Michael T. Nickerson

Enzymes have been used in the food processing industry for many years. However, the use of native enzymes is not conducive to high activity, efficiency, range of substrates, and adaptability to harsh food processing conditions. The advent of enzyme e...

  • Article
  • Open Access
2 Citations
2,075 Views
25 Pages

Overproduction of Phenolic Compounds in Pseudomonas putida KT2440 Through Endogen Deregulation of the Shikimate Pathway

  • William Merre,
  • Ricardo Andrade,
  • Cyril Perot,
  • Alexia Chandor-Proust and
  • Caroline Ranquet

11 March 2025

Metabolic engineering of the shikimate pathway offers a promising strategy for enhancing the production of aromatic compounds in microbial hosts. However, feedback inhibition of key enzymes, such as the 3-deoxy-D-arabino-heptulosonate 7-phosphate syn...

  • Communication
  • Open Access
6 Citations
5,388 Views
12 Pages

The engineering of enzymes for the purpose of controlling their activity represents a valuable approach to address challenges in both fundamental and applied research. Here, we describe and compare different design strategies for the generation of a...

  • Article
  • Open Access
9 Citations
4,880 Views
14 Pages

22 February 2021

With scientific and technological advances, growing research has focused on engineering enzymes that acquire enhanced efficiency and activity. Thereinto, computer-based enzyme modification makes up for the time-consuming and labor-intensive experimen...

  • Brief Report
  • Open Access
1,195 Views
16 Pages

Efficient Searches in Protein Sequence Space Through AI-Driven Iterative Learning

  • Ignacio Suárez-Martín,
  • Valeria A. Risso,
  • Rocío Romero-Zaliz and
  • Jose M. Sanchez-Ruiz

The protein sequence space is vast. This fact, together with the prevalence of epistasis, hampers the engineering of novel enzymes through library screening and is a major obstacle to any attempt to predict natural protein evolution. Recently, specia...

  • Conference Report
  • Open Access
1,664 Views
8 Pages

The 11th International Congress on Biocatalysis (biocat2024), Hamburg, Germany, 25–29 August 2024

  • Victoria Bueschler,
  • Paul Bubenheim,
  • Barbara Klippel,
  • Ana Malvis Romero,
  • Daniel Ohde,
  • Anna-Lena Heins,
  • Johannes Gescher,
  • Franziska Rohweder and
  • Andreas Liese

10 June 2025

The “11th International Congress on Biocatalysis (biocat2024)” was part of a biennial series that unites the fields of biology and chemistry, attracting researchers from the life sciences, engineering, and computer science. This internati...

  • Article
  • Open Access
4 Citations
3,077 Views
16 Pages

Multiple Cofactor Engineering Strategies to Enhance Pyridoxine Production in Escherichia coli

  • Lijuan Wu,
  • Jinlong Li,
  • Yahui Zhang,
  • Zhizhong Tian,
  • Zhaoxia Jin,
  • Linxia Liu and
  • Dawei Zhang

Pyridoxine, also known as vitamin B6, is an essential cofactor in numerous cellular processes. Its importance in various applications has led to a growing interest in optimizing its production through microbial biosynthesis. However, an imbalance in...

  • Article
  • Open Access
23 Citations
5,769 Views
15 Pages

Construction and Analysis of an Enzyme-Constrained Metabolic Model of Corynebacterium glutamicum

  • Jinhui Niu,
  • Zhitao Mao,
  • Yufeng Mao,
  • Ke Wu,
  • Zhenkun Shi,
  • Qianqian Yuan,
  • Jingyi Cai and
  • Hongwu Ma

17 October 2022

The genome-scale metabolic model (GEM) is a powerful tool for interpreting and predicting cellular phenotypes under various environmental and genetic perturbations. However, GEM only considers stoichiometric constraints, and the simulated growth and...

  • Review
  • Open Access
67 Citations
17,964 Views
33 Pages

18 February 2025

Enzyme immobilization plays a critical role in enhancing the efficiency and sustainability of biocatalysis, addressing key challenges such as limited enzyme stability, short shelf life, and difficulties in recovery and recycling, which are pivotal fo...

  • Feature Paper
  • Review
  • Open Access
1,789 Views
26 Pages

Advances in Strategies for In Vivo Directed Evolution of Targeted Functional Genes

  • Hantong Wu,
  • Lang Yin,
  • Jingwen Chen,
  • Xin Wang and
  • Kequan Chen

2 December 2025

Enzymes are indispensable in fields such as biotechnology, medicine, and industrial manufacturing due to their high catalytic specificity and efficiency under mild conditions. However, their natural versions often suffer from limitations, including l...

  • Review
  • Open Access
50 Citations
7,235 Views
17 Pages

Recent Strategies for the Immobilization of Therapeutic Enzymes

  • Chen-Yuan Zhu,
  • Fei-Long Li,
  • Ye-Wang Zhang,
  • Rahul K. Gupta,
  • Sanjay K. S. Patel and
  • Jung-Kul Lee

30 March 2022

Therapeutic enzymes play important roles in modern medicine due to their high affinity and specificity. However, it is very expensive to use them in clinical medicine because of their low stability and bioavailability. To improve the stability and ef...

  • Article
  • Open Access
12 Citations
6,171 Views
13 Pages

Molecular Basis for Converting (2S)-Methylsuccinyl-CoA Dehydrogenase into an Oxidase

  • Simon Burgener,
  • Thomas Schwander,
  • Elvira Romero,
  • Marco W. Fraaije and
  • Tobias J. Erb

28 December 2017

Although flavoenzymes have been studied in detail, the molecular basis of their dioxygen reactivity is only partially understood. The members of the flavin adenosine dinucleotide (FAD)-dependent acyl-CoA dehydrogenase and acyl-CoA oxidase families ca...

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