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Microorganisms, Volume 13, Issue 11

2025 November - 229 articles

Cover Story: Emerging evidence indicates that the gut microbiome plays a pivotal role in maintaining gut barrier integrity and modulating host immune responses. Gut dysbiosis has been extensively documented across numerous chronic inflammatory diseases. However, whether dysbiosis acts as a primary driver or a secondary consequence of these conditions remains a subject of ongoing debate. Investigating the contribution of the gut microbiome to the pathogenesis of chronic inflammatory diseases offers significant opportunities for therapeutic innovation. This article synthesizes recent studies on the role of the gut microbiome in six distinct chronic inflammatory diseases and provides insights into the development of microbiota-based therapeutic strategies. View this paper
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Articles (229)

  • Article
  • Open Access
986 Views
15 Pages

Subclinical hypothyroidism (SCH) is a condition characterized by thyroid hormone dysregulation, often associated with subtle clinical symptoms and metabolic disturbances. Emerging evidence suggests that the gut microbiota plays a crucial role in modu...

  • Article
  • Open Access
678 Views
19 Pages

Analysis of Gut Microbial Communities and Functions in Passer ammodendri Under Two Extreme Environments

  • Yaqi Liu,
  • Peng He,
  • Dongxin Liu,
  • Yang Song,
  • Chenxi Jia,
  • Duochun Wang,
  • Qinghua Jin,
  • Gang Song and
  • Qiang Wei

The gut microbiome regulates multiple physiological processes of the host and plays a significant role in the adaptation of wild animal hosts to extreme environments. The saxaul sparrow (Passer ammodendri) is a typical bird species found in the north...

  • Article
  • Open Access
513 Views
16 Pages

Co-Occurrence Patterns of Bacterial Communities and Resistance Genes: A Comprehensive Multi-Pen Fecal Microbiome and Resistome Study in Dairy Farms

  • Adriana Garzon,
  • Rafael Portillo-Gonzalez,
  • Gregory Habing,
  • Bart C. Weimer,
  • Cory Schlesener,
  • Noelia Silva-del-Rio,
  • Betsy M. Karle,
  • Craig Miramontes and
  • Richard V. Pereira

Antimicrobial resistance (AMR) poses a critical public health threat, with rising multidrug resistance cases compromising treatment effectiveness. Knowledge about the resistome in dairy production systems remains limited, particularly regarding lacta...

  • Article
  • Open Access
699 Views
18 Pages

Coconut (Cocos nucifera L.) cultivation is increasingly threatened by destructive fungal pathogens that reduce yield and compromise tree health, particularly in tropical regions in China. To address this challenge, the present study aimed to isolate...

  • Review
  • Open Access
1 Citations
935 Views
23 Pages

Bacteriophages and Endolysins Used in the Biocontrol of Staphylococcus aureus

  • Maryoris E. Soto Lopez,
  • Ana Margarita Otero-Herrera,
  • Fernando Mendoza-Corvis,
  • Jose Jorge Salgado-Behaine,
  • Rocio López-Vergara,
  • Ana M. Hernández-Arteaga,
  • Derrick Cortessi,
  • Pedro M. P. Vidigal and
  • Omar Pérez-Sierra

Staphylococcus aureus is a major foodborne pathogen associated with contamination of dairy and meat products, posing a persistent challenge to food safety due to its biofilm formation and resistance to multiple antibiotics. In this review, we summari...

  • Article
  • Open Access
450 Views
17 Pages

This study evaluated the effects of sea buckthorn polysaccharides (SBP) on rumen fermentation in Hu sheep through in vitro fermentation. A single-factor randomized design was employed with four treatment groups in which SBP was added to a basal diet...

  • Article
  • Open Access
613 Views
14 Pages

Mosquito Exposure Risks in Equine Facilities: An Environmental–Managerial Assessment in Western Romania

  • Paula Nistor,
  • Livia Stanga,
  • Andreia Chirila,
  • Vlad Iorgoni,
  • Alexandru Gligor,
  • Alexandru Ciresan,
  • Bogdan Florea,
  • Carina Bota,
  • Vlad Cocioba and
  • Viorel Herman
  • + 5 authors

West Nile Virus (WNV) is a mosquito-borne zoonosis with recurrent equine and human cases in Romania. Horses, although dead-end hosts, act as sentinels for local viral circulation. Farm-level risk conditions remain under-characterized. This pilot, exp...

  • Article
  • Open Access
533 Views
22 Pages

Infection-Mediated Shifts in the Microbial Communities of Deer-Fed Ixodes scapularis Ticks

  • Patil Tawidian,
  • Bradley J. Tucker,
  • Tela E. Zembsch,
  • Hon S. Ip and
  • Lyric C. Bartholomay

The holobiont of the blacklegged tick (Ixodes scapularis) includes maternally inherited rickettsial endosymbionts and environmentally acquired microbes that may influence tick fitness and vector competence. While previous studies have focused on char...

  • Article
  • Open Access
461 Views
13 Pages

This study explored the microbial diversity within the rhizosphere of Securidaca longipedunculata (African violet tree), a medicinal plant recognized for its ethnobotanical importance. Six rhizospheric bacterial isolates were identified and character...

  • Article
  • Open Access
471 Views
19 Pages

Linking N2O Emission with AOB and nirK-Denitrifier in Paddy Fields of Karst and Non-Karst Areas

  • Zhenjiang Jin,
  • Weijian Chen,
  • Wu Yuan,
  • Yunlong Sun,
  • Xiaoyi Xiao,
  • Heyao Liang,
  • Chengxi Yang and
  • Bin Dong

Denitrification and nitrification are two pivotal microbial processes relating to N2O emissions. However, the difference in N2O emission fluxes and N2O-producing bacteria between a karst (KA) and non-karst area (NKA) remains unclear. The objective of...

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Microorganisms - ISSN 2076-2607