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  • Article
  • Open Access
13 Citations
5,400 Views
26 Pages

Successional Development of the Phototrophic Community in Biological Soil Crusts on Coastal and Inland Dunes

  • Sandra Kammann,
  • Ulf Schiefelbein,
  • Christian Dolnik,
  • Tatiana Mikhailyuk and ,
  • Eduard Demchenko,
  • Ulf Karsten and
  • Karin Glaser
  • + 2 authors+ 0 author

29 December 2022

(1) Biological soil crusts (biocrusts) are microecosystems consisting of prokaryotic and eukaryotic microorganisms growing on the topsoil. This study aims to characterize changes in the community structure of biocrust phototrophic organisms along a d...

(This article belongs to the Section Ecology)
  • Article
  • Open Access
29 Citations
5,162 Views
27 Pages

Deep chlorophyll maxima (DCM) and metalimnetic oxygen maxima (MOM) are outstanding biogeochemical features of acidic pit lakes (APL). However, knowledge of the eukaryotic phototrophs responsible for their formation is limited. We aimed at linking the...

(This article belongs to the Special Issue Extremophiles 2.0)
  • Article
  • Open Access
14 Citations
5,435 Views
27 Pages

29 July 2019

Terrestrial hot springs have provided a niche space for microbial communities throughout much of Earth’s history, and evidence for hydrothermal deposits on the Martian surface suggest this could have also been the case for the red planet. Prior...

(This article belongs to the Section Origins of Life)
  • Article
  • Open Access
3 Citations
2,857 Views
22 Pages

Phototrophs in Unique Habitats of Thermomineral Springs in Central Serbia

  • Ana Milićević,
  • Slađana Popović,
  • Vanja Milovanović,
  • Vesna Karadžić and ,
  • Željko Savković,
  • Vukašin Bjelica,
  • Jelena Krizmanić,
  • Gordana Subakov-Simić and
  • Olga Jakovljević
  • + 4 authors+ 0 author

24 January 2025

Thermomineral springs are unique aquatic habitats characterized by high temperatures or mineral-rich water and often host specialized microbial communities. In Serbia, these springs represent an important but under-researched ecological resource whos...

(This article belongs to the Section Biodiversity, Ecology and Evolution)
  • Article
  • Open Access
1,121 Views
18 Pages

Community Composition and Dynamics of Freshwater Biofouling on Coated Inland Vessel Models in the Danube River

  • Sanja Šovran,
  • Ana Knežević,
  • Danijela Vidaković,
  • Slađana Popović and ,
  • Milan Kalajdžić and
  • Nikola Unković
  • + 1 author+ 0 author

The present study investigated the community composition and dynamics of freshwater biofouling on fiberglass inland waterway vessel (IWV) models coated with two commercial antifouling paints deployed in the Danube River (Serbia) for a total of five m...

  • Article
  • Open Access
1 Citations
1,159 Views
17 Pages

Biological soil crusts (referred to as biocrusts) constitute prominent components within the ecosystem of tropical coral islands in the South China Sea, covering approximately 6.25% of the island’s terrestrial surface. Biocrusts are the key to...

(This article belongs to the Section Environmental Microbiology)
  • Article
  • Open Access
5 Citations
3,619 Views
20 Pages

In this first comprehensive study of Lake Winnipeg’s microbial communities, limnetic and littoral euphotic zones were examined during each season from 2016 through 2020. Classical cultivation and modern high-throughput sequencing techniques pro...

(This article belongs to the Special Issue Phototrophic Bacteria)
  • Article
  • Open Access
505 Views
16 Pages

Effects of a 12-Year Nitrogen Addition Experiment on Protist Communities in a Boreal Forest, Heilongjiang Province, China

  • Gang Fu,
  • Guancheng Liu,
  • Ligong Wang,
  • Yuguo Gao and ,
  • Zhicheng Yao,
  • Yajuan Xing and
  • Qinggui Wang
  • + 2 authors+ 0 author

4 June 2026

Escalating nitrogen (N) deposition has profound effects on terrestrial ecosystems; however, the mechanisms underlying soil protist community responses in cold-temperate regions remain poorly understood. This study investigated the effects of long-ter...

(This article belongs to the Special Issue Communities, Food Web, and Ecological Function of Soil Animals in Agricultural and Forest Land)
  • Article
  • Open Access
5 Citations
2,778 Views
15 Pages

Comparing the Environmental Influences and Community Assembly of Protist Communities in Two Anthropogenic Coastal Areas

  • Wenwen Qiao,
  • Hongbo Li,
  • Jinyong Zhang,
  • Xiaohan Liu and ,
  • Ruofei Jin and
  • Hongjun Li
  • + 1 author+ 0 author

Anthropogenic stresses are intensively affecting the structure and function of microbial communities in coastal ecosystems. Despite being essential components of coastal ecosystems, the environmental influences and assembly processes of protist commu...

(This article belongs to the Section Environmental Microbiology)
  • Article
  • Open Access
713 Views
20 Pages

Effects of Nutrient Limitation on Antarctic Microbial Community Diversity, Composition, and Interactions: A Cryoconite Microcosm Study

  • Eli M. S. Gendron,
  • Melia Scholl,
  • Adam J. Solon,
  • Rachel R. Rubin and ,
  • Anna Bergstrom,
  • Pacifica Sommers,
  • Arvind Varsani,
  • Steven K. Schmidt and
  • Dorota L. Porazinska
  • + 4 authors+ 0 author

Dry, harsh, nutrient-limited environments such as the McMurdo Dry Valleys, Antarctica, may be particularly susceptible to changes in nutrient availability, demonstrating strong deterministic community assembly processes shaping communities within an...

(This article belongs to the Special Issue Microbial Nutrient Cycling Mechanisms)
  • Article
  • Open Access
11 Citations
5,706 Views
16 Pages

Contrasting Community Composition and Co-Occurrence Relationships of the Active Pico-Sized Haptophytes in the Surface and Subsurface Chlorophyll Maximum Layers of the Arctic Ocean in Summer

  • Ping Sun,
  • Yuyu Liao,
  • Ying Wang,
  • Eun-Jin Yang and ,
  • Nianzhi Jiao,
  • Youngju Lee,
  • Jinyoung Jung,
  • Kyoung-Ho Cho,
  • Jong-Kuk Moon and
  • Dapeng Xu
  • + 5 authors+ 0 author

Haptophytes (Hacrobia: Haptophyta), which can perform phototrophic, phagotrophic, or mixotrophic nutritional modes, are critical for element cycling in a variety of aquatic ecosystems. However, their diversity, particularly in the changing Arctic Oce...

(This article belongs to the Special Issue Ecology, Diversity and Distribution of Pico-Sized Algae)
  • Article
  • Open Access
1,045 Views
27 Pages

Exploring New Conservation Methods: Isolation and Characterization of Algicidal Bacteria from Ornamental Fountains in the Alhambra and Generalife (Granada, Spain)

  • Isabel Calvo-Bayo,
  • Sandy Fillet,
  • Oana A. Cuzman,
  • Lorena Cuberos-Cáceres and ,
  • Manuel González-del-Valle,
  • Fernando Bolívar-Galiano and
  • Julio Romero-Noguera
  • + 2 authors+ 0 author

Ornamental fountains in the Alhambra and Generalife (Granada, Spain) constitute complex socio-ecological systems where water, stone, and biological communities interact, making them highly vulnerable to biodeterioration caused by phototrophic microor...

  • Proceeding Paper
  • Open Access
2 Citations
2,262 Views
5 Pages

Exploring Lampenflora of Resavska Cave, Serbia

  • Slađana Popović,
  • Marija Pećić and
  • Gordana Subakov Simić

Lampenflora, a complex phototrophic community that develops near artificial light in show caves, is recognized as a major concern for cave management and its regular monitoring has become necessity. For the purpose of this work, the monitoring was pe...

(This article belongs to the Proceedings of The 2nd International Electronic Conference on Diversity (IECD 2022)—New Insights into the Biodiversity of Plants, Animals and Microbes)
  • Review
  • Open Access
41 Citations
10,900 Views
41 Pages

During the past decades, tremendous advances have been made in the possibilities to study the diversity of microbial communities in the environment. The development of methods to study these communities on the basis of 16S rRNA gene sequences analysi...

(This article belongs to the Special Issue Diversity and Dynamics of Marine Microbial Communities)
  • Article
  • Open Access
14 Citations
4,549 Views
21 Pages

Marine Bacterial Communities in the Xisha Islands, South China Sea

  • Yihui Wang,
  • Lei Wang,
  • Yongliang Liu,
  • Shengqi Su and
  • Wenjin Hao

18 July 2023

Oligotrophic marine environments are ecological funnels in marine ecosystems and are essential for maintaining the health and balance of the entire marine ecosystem. Bacterial communities are one of the most important biological populations, which ca...

(This article belongs to the Section Marine Diversity)
  • Article
  • Open Access
1 Citations
1,399 Views
26 Pages

Planktonic Pro- and Microeukaryotes of the Kuibyshev Reservoir and Its Bays During the Cyanobacterial Bloom Period

  • Mikhail Yu. Gorbunov,
  • Svetlana V. Bykova,
  • Natalia G. Tarasova,
  • Ekaterina S. Krasnova and
  • Marina V. Umanskaya

25 May 2025

Kuibyshev Reservoir, the largest in the Volga basin, is poorly covered by modern molecular studies. The results of a metabarcoding study of pro- and eukaryotic microbial plankton in its lower section during the summer period are presented. Bacteriopl...

(This article belongs to the Section Biodiversity and Functionality of Aquatic Ecosystems)
  • Article
  • Open Access
6 Citations
2,225 Views
18 Pages

Optical Proxies of Euxinia: Spectroscopic Studies of CDOM, Chlorophyll, and Bacteriochlorophylls in the Lagoon on Zeleny Cape (the White Sea)

  • Yu. G. Sokolovskaya,
  • E. D. Krasnova,
  • D. A. Voronov,
  • D. N. Matorin and ,
  • A. A. Zhiltsova and
  • S. V. Patsaeva
  • + 1 author+ 0 author

Along the shoreline of the White Sea, due to the post-glacial uplift of the coast, some water bodies with stable stratification have been formed. They have been classified as meromictic as they are at different stages of isolation from the Sea. As se...

(This article belongs to the Special Issue Micro Fluorescence Detectors/Sensors and Their Applications)
  • Article
  • Open Access
11 Citations
3,957 Views
15 Pages

Bacterial Communities in a Gradient of Abiotic Factors Near a Sulfide Thermal Spring in Northern Baikal

  • Svetlana Chernitsyna,
  • Irina Elovskaya,
  • Tatyana Pogodaeva,
  • Sergei Bukin and ,
  • Aleksandra Zakharenko and
  • Tamara Zemskaya
  • + 1 author+ 0 author

17 February 2023

The structure and diversity of microbial communities developing in the combined gradient of temperature (44–19 °C), as well as concentration of oxygen (0–10 mg/L) and hydrogen sulfide (33–0.7 mg/L), were studied in the thermal s...

(This article belongs to the Special Issue Diversity and Ecology of Freshwater Lake Microbial Communities)
  • Article
  • Open Access
34 Citations
6,254 Views
14 Pages

Taxonomic and Functional Diversity of Heterotrophic Protists (Cercozoa and Endomyxa) from Biological Soil Crusts

  • Samira Khanipour Roshan,
  • Kenneth Dumack,
  • Michael Bonkowski,
  • Peter Leinweber and ,
  • Ulf Karsten and
  • Karin Glaser
  • + 1 author+ 0 author

Biological soil crusts (biocrusts) accommodate diverse communities of phototrophic and heterotrophic microorganisms. Heterotrophic protists have critical roles in the microbial food webs of soils, with Cercozoa and Endomyxa often being dominant group...

(This article belongs to the Section Environmental Microbiology)
  • Article
  • Open Access
2 Citations
3,014 Views
26 Pages

31 December 2023

For the first time, we investigated species composition, phytoplankton community structure, and hydrochemical parameters in the artificial cooling reservoir of a major thermal power plant (TPP) in northeastern Europe located in the Pechora River basi...

(This article belongs to the Section Biodiversity, Ecology and Evolution)
  • Article
  • Open Access
11 Citations
3,584 Views
13 Pages

10 June 2023

Microbial communities are central components of river ecosystems. They are involved in the transportation and transformation of certain pollutants, including nutrients discharged into surface water. Knowledge of microbial community structures is vita...

(This article belongs to the Section Biodiversity and Functionality of Aquatic Ecosystems)
  • Article
  • Open Access
174 Views
14 Pages

We analyzed riverbed microbiota structure, gene expression, and fatty acid production across several sites along Little Miami River in Ohio, United States. The sites varied in stream width, shading, surrounding land use, and the size of the riparian...

(This article belongs to the Section Environmental Microbiology)
  • Article
  • Open Access
10 Citations
6,589 Views
15 Pages

A microcosm designed for culturing aquatic phototrophic biofilms on artificial substrata was used to perform experiments with microphytobenthos sampled during summer toxic outbreaks of Ostreopsis cf. ovata along the Middle Tyrrhenian coast. This dyna...

(This article belongs to the Special Issue Toxic Cyanobacteria and Toxic Dinoflagellates)
  • Article
  • Open Access
11 Citations
5,165 Views
20 Pages

Aquatic Thermal Reservoirs of Microbial Life in a Remote and Extreme High Andean Hydrothermal System

  • Vilma Pérez,
  • Johanna Cortés,
  • Francisca Marchant,
  • Cristina Dorador and ,
  • Verónica Molina,
  • Marcela Cornejo-D’Ottone,
  • Klaudia Hernández,
  • Wade Jeffrey,
  • Sergio Barahona and
  • Martha B. Hengst
  • + 5 authors+ 0 author

Hydrothermal systems are ideal to understand how microbial communities cope with challenging conditions. Lirima, our study site, is a polyextreme, high-altitude, hydrothermal ecosystem located in the Chilean Andean highlands. Herein, we analyze the b...

(This article belongs to the Special Issue Microbial Diversity in Extreme Environments)
  • Article
  • Open Access
2 Citations
962 Views
17 Pages

2 July 2025

Citrus is one of the most widely consumed fruits in the world, and its cultivation industry continues to develop rapidly. However, the roles of soil protistan communities during citrus growth are not yet fully understood, despite the potential signif...

(This article belongs to the Special Issue Innovative Techniques for Citrus Cultivation)
  • Article
  • Open Access
24 Citations
5,549 Views
21 Pages

12 October 2023

In mountain regions, biological soil crusts (BSCs) provide essential ecological services by being involved in primary production and nitrogen fixation. Eukaryotic algae and cyanobacteria are important photosynthetic components of these unique cryptog...

(This article belongs to the Special Issue Biodiversity and Biogeography of Terrestrial Algae and Cyanobacteria)
  • Article
  • Open Access
353 Views
14 Pages

26 August 2026

Hydrological seasonality is a major driver of microbial community dynamics in river ecosystems, yet how seasonal flow regimes regulate protistan diversity, community assembly, and functional organization remains poorly understood. In this study, envi...

(This article belongs to the Section Freshwater Biodiversity)
  • Article
  • Open Access
7 Citations
2,628 Views
20 Pages

Structure and Productivity of the Phytoplankton Community in the Southwestern Kara Sea in Early Summer

  • Sergey A. Mosharov,
  • Elena I. Druzhkova,
  • Andrey F. Sazhin,
  • Pavel V. Khlebopashev and ,
  • Anastasia N. Drozdova,
  • Nikolay A. Belyaev and
  • Andrey I. Azovsky
  • + 2 authors+ 0 author

Knowledge of the features of the structure and productivity of the Arctic communities of marine planktonic algae is necessary to identify possible changes in the pelagic ecosystem functioning under the changing climate condition of the Kara Sea. This...

(This article belongs to the Special Issue Biogeochemical Role of Algae in Aquatic Ecosystems: Basic Research and Applied Biotechnology)
  • Review
  • Open Access
8 Citations
3,879 Views
20 Pages

15 April 2024

Cyanobacteria are harmful algae that are monitored worldwide to prevent the effects of the toxins that they can produce. Most research efforts have focused on direct or indirect effects on human populations, with a view to gain easy accurate detectio...

(This article belongs to the Section Marine and Freshwater Toxins)
  • Article
  • Open Access
7 Citations
3,839 Views
20 Pages

6 November 2021

This survey is the first to explore the seasonal cycle of microbial eukaryote diversity (<3 µm) using the NGS method and a 10-month sediment trap (2018–2019). The long-term trap was deployed from September to June in the northwestern part of the K...

(This article belongs to the Section Plant Ecology)
  • Article
  • Open Access
12 Citations
3,289 Views
13 Pages

Biodiversity of Phototrophs and Culturable Fungi in Gobustan Caves

  • Svetlana Evgenievna Mazina,
  • Tatiana Vladimirovna Gasanova,
  • Ekaterina Vitalievna Kozlova,
  • Anna Vladimirovna Popkova and ,
  • Anton Sergeevich Fedorov,
  • Irina Leonidovna Bukharina,
  • Anna Sergeevna Pashkova,
  • Maxim Viktorovich Larionov,
  • Rahman Rahim oglu Abdullayev and
  • Vugar Urfat oglu Isaev
  • + 5 authors+ 0 author

5 January 2023

Unique natural objects, such as the caves of the Gobustan National Historical and Artistic Preserve, are also of great cultural and historical value due to rock art and sites of ancient people. A favorable microclimate makes these habitats convenient...

(This article belongs to the Section Biodiversity, Ecology and Evolution)
  • Article
  • Open Access
6 Citations
4,623 Views
24 Pages

Taxonomic Composition of Protist Communities in the Coastal Stratified Lake Kislo-Sladkoe (Kandalaksha Bay, White Sea) Revealed by Microscopy

  • Yulia V. Mindolina,
  • Elena A. Selivanova,
  • Marina E. Ignatenko,
  • Elena D. Krasnova and ,
  • Dmitry A. Voronov and
  • Andrey O. Plotnikov
  • + 1 author+ 0 author

29 December 2022

Lake Kislo-Sladkoe is a stratified water body partly isolated from the White Sea. Perennial meromixis in the lake irregularly alternates with mixing events. Taking into account that the protists of Arctic coastal stratified water bodies are understud...

(This article belongs to the Special Issue Ecology of Microbes in Marine and Estuarine Ecosystems)
  • Article
  • Open Access
3 Citations
3,885 Views
18 Pages

Prokaryotic Diversity and Dynamics during Dinoflagellate Bloom Decays in Coastal Tunisian Waters

  • Rim Lajnef,
  • Marianne Quéméneur,
  • Moufida Abdennadher,
  • Lamia Dammak Walha and ,
  • Asma Hamza,
  • Malika Belhassen and
  • Amel Bellaaj Zouari
  • + 2 authors+ 0 author

14 February 2023

(1) Background: Harmful algal blooms (HABs) can negatively impact marine ecosystems, but few studies have evaluated the microbial diversity associated with HABs and its potential role in the fates of these proliferations. (2) Methods: Marine prokaryo...

(This article belongs to the Special Issue Women’s Special Issue Series: Diversity)
  • Article
  • Open Access
14 Citations
3,070 Views
20 Pages

Bacterial Community Characteristics and Roles in Nitrogen Transformation in Industrial Farming Systems of Litopenaeus vannamei

  • Hongwei Shan,
  • Yulong Du,
  • Tao Li,
  • Fang Wang and ,
  • Hongyu Li and
  • Haitao Wang
  • + 1 author+ 0 author

Industrial farming is one of the main farming systems used for L. vannamei, and it is also the main direction of development in the future. To investigate the role of the bacterial community in nitrogen transformation in industrial L. vannamei farmin...

(This article belongs to the Topic Aquatic Environment Research for Sustainable Development)