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Metabolites, Volume 10, Issue 1

January 2020 - 41 articles

Cover Story: Metabolomics is a powerful tool, but its full utility is still impeded by several challenges. These include the accurate chemical identification of all metabolites and limited depth-of-coverage of current methods. This article presents a four-dimensional solution using UHPLC-trapped ion mobility spectrometry coupled to tandem mass spectrometry (UHPLC-TIMS-TOF-MS). Multidimensional UHPLC-TIMS separations offer additional depth of coverage through increased peak capacities, while metabolite identification confidence is simultaneously enhanced by incorporating orthogonal collision cross-section (CCS) data matching. Thus, a CCS library of plant natural products was generated to facilitate metabolite identifications, and its use was demonstrated with extracts from the model legume Medicago truncatula. View this paper.
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Articles (41)

  • Article
  • Open Access
35 Citations
4,729 Views
14 Pages

Comparative Analysis of β-Carotene Production by Mucor circinelloides Strains CBS 277.49 and WJ11 under Light and Dark Conditions

  • Tahira Naz,
  • Shaista Nosheen,
  • Shaoqi Li,
  • Yusuf Nazir,
  • Kiren Mustafa,
  • Qing Liu,
  • Victoriano Garre and
  • Yuanda Song

16 January 2020

Carotenoids are natural potent antioxidants and free radical scavengers which are able to modulate the pathogenesis of some cancers and heart diseases in human, indicating their importance in being provided through the diet. Mucor circinelloides accu...

  • Article
  • Open Access
23 Citations
4,054 Views
12 Pages

Sulfonamide Inhibition Profile of the β-Carbonic Anhydrase from Malassezia restricta, An Opportunistic Pathogen Triggering Scalp Conditions

  • Sonia Del Prete,
  • Andrea Angeli,
  • Cynthia Ghobril,
  • Julien Hitce,
  • Cécile Clavaud,
  • Xavier Marat,
  • Claudiu T. Supuran and
  • Clemente Capasso

16 January 2020

The critical CO2 hydration reaction to bicarbonate and protons is catalyzed by carbonic anhydrases (CAs, EC 4.2.1.1). Their physiological role is to assist the transport of the CO2 and HCO3− at the cellular level, which will not be ensured by t...

  • Article
  • Open Access
25 Citations
6,514 Views
12 Pages

Study of the Royal Jelly Free Fatty Acids by Liquid Chromatography-High Resolution Mass Spectrometry (LC-HRMS)

  • Maroula G. Kokotou,
  • Christiana Mantzourani,
  • Rodalia Babaiti and
  • George Kokotos

16 January 2020

The lipidome of royal jelly (RJ) consists of medium-chained (8–12 carbon atoms) free fatty acids. We present herein a liquid chromatography-high resolution mass spectrometry (HRMS) method that permits the determination of RJ fatty acids and at...

  • Article
  • Open Access
28 Citations
6,341 Views
14 Pages

15 January 2020

In this study, we evaluate the association between vaginal and cervical human papillomavirus infections high-risk types (HPV+H), negative controls (HPV−), the bacterial biota, and urinary metabolites via integration of metagenomics, metabolomic...

  • Review
  • Open Access
276 Citations
19,927 Views
30 Pages

Metabolomics in the Context of Plant Natural Products Research: From Sample Preparation to Metabolite Analysis

  • Mohamed A. Salem,
  • Leonardo Perez de Souza,
  • Ahmed Serag,
  • Alisdair R. Fernie,
  • Mohamed A. Farag,
  • Shahira M. Ezzat and
  • Saleh Alseekh

15 January 2020

Plant-derived natural products have long been considered a valuable source of lead compounds for drug development. Natural extracts are usually composed of hundreds to thousands of metabolites, whereby the bioactivity of natural extracts can be repre...

  • Article
  • Open Access
69 Citations
21,638 Views
18 Pages

Comprehensive Circulatory Metabolomics in ME/CFS Reveals Disrupted Metabolism of Acyl Lipids and Steroids

  • Arnaud Germain,
  • Dinesh K. Barupal,
  • Susan M. Levine and
  • Maureen R. Hanson

14 January 2020

The latest worldwide prevalence rate projects that over 65 million patients suffer from myalgic encephalomyelitis/chronic fatigue syndrome (ME/CFS), an illness with known effects on the functioning of the immune and nervous systems. We performed an e...

  • Article
  • Open Access
31 Citations
5,354 Views
11 Pages

Metabolomic Profiling of Fungal Pathogens Responsible for Root Rot in American Ginseng

  • Natasha DesRochers,
  • Jacob P. Walsh,
  • Justin B. Renaud,
  • Keith A. Seifert,
  • Ken K.-C. Yeung and
  • Mark W. Sumarah

14 January 2020

Ginseng root is an economically valuable crop in Canada at high risk of yield loss caused by the pathogenic fungus Ilyonectria mors-panacis, formerly known as Cylindrocarpon destructans. While this pathogen has been well-characterized from morphologi...

  • Article
  • Open Access
3 Citations
3,080 Views
14 Pages

13 January 2020

Temporal associations in longitudinal nontargeted metabolomics data are generally ignored by common pattern recognition methods such as partial least squares discriminant analysis (PLS-DA) and orthogonal partial least squares discriminant analysis (O...

  • Article
  • Open Access
19 Citations
5,170 Views
23 Pages

Testicular Caspase-3 and β-Catenin Regulators Predicted via Comparative Metabolomics and Docking Studies

  • Mohammed S. Hifnawy,
  • Mahmoud A. Aboseada,
  • Hossam M. Hassan,
  • Asmaa M. AboulMagd,
  • Adel F. Tohamy,
  • Samraa H. Abdel-Kawi,
  • Mostafa E. Rateb,
  • El Moataz Bellah El Naggar,
  • Miaomiao Liu and
  • Ronald J. Quinn
  • + 2 authors

11 January 2020

Many routes have been explored to search for effective, safe, and affordable alternatives to hazardous female contraceptives. Herbal extracts and their secondary metabolites are some of the interesting research areas to address this growing issue. Th...

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Metabolites - ISSN 2218-1989