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32 Results Found

  • Article
  • Open Access
1 Citations
2,297 Views
20 Pages

Microflora play an important role in the fermentation of blueberry wine, influencing the flavor and nutrient formation. Commercial yeasts give blueberry wines an average flavor profile that does not highlight the specific aroma and origin of the blue...

  • Article
  • Open Access
3 Citations
2,675 Views
15 Pages

15 March 2023

Electrolytic manganese residue (EMR) contains a large number of soluble manganese ions and ammonia nitrogen, which seriously endangers the surrounding environment. Solidifying manganese and removing nitrogen has become the primary method for controll...

  • Article
  • Open Access
4 Citations
2,393 Views
13 Pages

14 December 2022

Bacteria are among the most critical components in soil. The application of nutrients as an important management measure to maintain soil fertility can affect the structure of soil bacterial communities. The objective of this study was to explore the...

  • Article
  • Open Access
3 Citations
1,674 Views
10 Pages

16 August 2024

Hot springs contain many microorganisms, and a great deal of research has been conducted on the bacteria in hot springs but less on the fungi. Microbial diversity research in hot springs will help to further develop and utilize the microbial resource...

  • Feature Paper
  • Article
  • Open Access
7 Citations
3,111 Views
14 Pages

Differential Assembly and Shifts of the Rhizosphere Bacterial Community by a Dual Transgenic Glyphosate-Tolerant Soybean Line with and without Glyphosate Application

  • Minkai Yang,
  • Zhongling Wen,
  • Chenyu Hao,
  • Aliya Fazal,
  • Yonghui Liao,
  • Fuhe Luo,
  • Weixuan Yao,
  • Tongming Yin,
  • Rongwu Yang and
  • Yonghua Yang
  • + 3 authors

Modern agriculture has gained significant economic benefits worldwide with the use of genetically modified (GM) technologies. While GM crops provide convenience to humans, their biosafety has attracted increasing concern. In this study, the Illumina...

  • Article
  • Open Access
1,375 Views
19 Pages

Microbiome Flora and Metabolomics Analysis of Mung Bean Sour Liquid in Luoyang, China

  • Xinyi Zhang,
  • Shengjuan Zhao,
  • Jiangfeng Yuan and
  • Lixing Feng

5 February 2025

In order to reveal the fermentation microflora and fermentation metabolites of traditional mung bean sour liquid (MBSL) in Luoyang area, China, this experiment was sampled from four administrative districts of Luoyang, and volatile metabolites and no...

  • Article
  • Open Access
1 Citations
1,922 Views
15 Pages

Bacterial Community Structure in Rhizosphere of Barley at Maturity Stage

  • Siyu Zhang,
  • Yue An,
  • Yu Zhou,
  • Xiaofang Wang,
  • Yiqing Tang,
  • Daorong Zhang,
  • Genlou Sun,
  • Qifei Wang and
  • Xifeng Ren

16 November 2023

The crop rhizosphere is the main site of soil microbial activities. Understanding the structure and diversity of microbial communities in the crop rhizosphere will help us reveal interactions between rhizosphere microorganisms and plant growth. In th...

  • Article
  • Open Access
31 Citations
4,673 Views
16 Pages

Effects of Reclaimed Water Irrigation on Microbial Diversity and Composition of Soil with Reducing Nitrogen Fertilization

  • Wei Guo,
  • Xuebin Qi,
  • Yatao Xiao,
  • Ping Li,
  • Mathias Neumann Andersen,
  • Yan Zhang and
  • Zhijuan Zhao

23 March 2018

Reclaimed water (RW) is an alternative water resource that has been utilized all over the world, but its environmental effects are not fully understood. Soil biodiversity is an important indicator of soil tolerance and resilience. In the present stud...

  • Article
  • Open Access
8 Citations
3,094 Views
14 Pages

20 September 2022

The present study investigated the effects of alfalfa cover crops on soil fungal communities and function in apple orchards in arid desert oases. A five-year apple orchard was subjected to two treatments: Intercropping with an alfalfa cover crop (A)...

  • Article
  • Open Access
4 Citations
2,353 Views
17 Pages

Soil bacterial communities play a crucial role in the functioning of estuarine wetlands. Investigating the structure and function of these communities across various wetland types, along with the key factors influencing them, is essential for underst...

  • Article
  • Open Access
41 Citations
6,592 Views
15 Pages

Assessment of Bifidobacterium Species Using groEL Gene on the Basis of Illumina MiSeq High-Throughput Sequencing

  • Lujun Hu,
  • Wenwei Lu,
  • Linlin Wang,
  • Mingluo Pan,
  • Hao Zhang,
  • Jianxin Zhao and
  • Wei Chen

21 November 2017

The next-generation high-throughput sequencing techniques have introduced a new way to assess the gut’s microbial diversity on the basis of 16S rRNA gene-based microbiota analysis. However, the precise appraisal of the biodiversity of Bifidobacterium...

  • Article
  • Open Access
3 Citations
1,596 Views
17 Pages

3 April 2024

At the southeastern periphery of the Tibetan Plateau, the subalpine ecosystem hosts grasses as some of the most substantial species. However, the community and function of arbuscular mycorrhizal fungi (AMF) around the rhizospheres of grasses in the s...

  • Article
  • Open Access
3 Citations
1,553 Views
16 Pages

Effects of Intercropping of Sisal and Three Different Leguminous Plants on Soil Bacterial Diversity

  • Yanqiong Liang,
  • Shibei Tan,
  • Chunping He,
  • Rui Li,
  • Ying Lu,
  • Helong Chen,
  • Xing Huang,
  • Weihuai Wu and
  • Kexian Yi

15 October 2024

Intercropping is widely utilised in agricultural production to enhance land use efficiency because of its benefits, such as heightened crop productivity and optimised resource utilisation. We investigated the effects of Pinto peanut/sisal (HST), Styl...

  • Article
  • Open Access
2 Citations
1,041 Views
19 Pages

Effect of PGPRs on the Rhizosphere Microbial Community Structure and Yield of Silage Maize in Saline–Alkaline Fields

  • Weisong Zhao,
  • Shezeng Li,
  • Wei Yang,
  • Naqi Cui,
  • Xiuyun Lu,
  • Shaojing Mo,
  • Qinggang Guo and
  • Ping Ma

20 August 2025

Plant Growth Promoting Rhizobacteria, PGPR, can protect plants against soil-borne diseases and abiotic stress conditions. The primary objective of this study was to evaluate the effects of different PGPRs (TF1, TF2, TF3, and TF4) on the rhizosphere m...

  • Article
  • Open Access
3 Citations
3,849 Views
16 Pages

Zero-Emission of Palm Oil Mill Effluent Final Discharge Promoted Bacterial Biodiversity Rebound in the Receiving Water System

  • Noor Shaidatul Lyana Mohamad-Zainal,
  • Norhayati Ramli,
  • Nurhasliza Zolkefli,
  • Nur Azyani Jamari,
  • Nurul Asyifah Mustapha,
  • Mohd Ali Hassan and
  • Toshinari Maeda

16 November 2021

Zero-emission technology for palm oil mill effluent (POME) has led to a breakthrough in the palm oil industry in relation to the goal of sustainable development. However, there are limited resources on how this technology has affected the bacterial c...

  • Article
  • Open Access
15 Citations
4,068 Views
11 Pages

Amplicon-Based Next Generation Sequencing for Rapid Identification of Rickettsia and Ectoparasite Species from Entomological Surveillance in Thailand

  • Suwanna Chaorattanakawee,
  • Achareeya Korkusol,
  • Bousaraporn Tippayachai,
  • Sommai Promsathaporn,
  • Betty K. Poole-Smith and
  • Ratree Takhampunya

16 February 2021

Background: Next generation sequencing (NGS) technology has been used for a wide range of epidemiological and surveillance studies. Here, we used amplicon-based NGS to species identify Rickettsia and their arthropod hosts from entomological surveilla...

  • Article
  • Open Access
471 Views
21 Pages

Study on the Influence Mechanism of the Rhizosphere Soil Microbial Community and Physicochemical Factors on the Occurrence of Pepper Phytophthora Blight

  • Xin Wang,
  • Fan Yang,
  • Ying Zhang,
  • Miaomiao Liu,
  • Yuting Hong,
  • Xiaoke Chang,
  • Hongxun Jiang,
  • Wenrui Yang,
  • Qiuju Yao and
  • Baoming Tian

In order to clarify the changes and correlations among microbial community structure and soil environmental factors in the rhizosphere soil of peppers under healthy and diseased conditions, Illumina MiSeq technology was used to perform high-throughpu...

  • Article
  • Open Access
60 Citations
4,392 Views
21 Pages

Impact of Different Biochars on Microbial Community Structure in the Rhizospheric Soil of Rice Grown in Albic Soil

  • Dawei Yin,
  • Hongyu Li,
  • Haize Wang,
  • Xiaohong Guo,
  • Zhihui Wang,
  • Yandong Lv,
  • Guohua Ding,
  • Liang Jin and
  • Yu Lan

7 August 2021

The purpose of this study was to clarify the effects of biochar on the diversity of bacteria and fungi in the rice root zone and to reveal the changes in soil microbial community structure in the root zone after biochar application to provide a scien...

  • Article
  • Open Access
11 Citations
2,740 Views
20 Pages

Effect of Karst Microhabitats on the Structure and Function of the Rhizosphere Soil Microbial Community of Rhododendron pudingense

  • Congjun Yuan,
  • Haodong Wang,
  • Xiaoyong Dai,
  • Meng Chen,
  • Jun Luo,
  • Rui Yang and
  • Fangjun Ding

24 April 2023

Soil microbes play an important role in the microbial circulation and energy flow of ecosystems. In order to understand the change in the rhizosphere soil microbial community structure and function in the heterogeneous karst habitats, the nutrient co...

  • Article
  • Open Access
6 Citations
4,398 Views
16 Pages

Airborne Bacterial and Eukaryotic Community Structure across the United Kingdom Revealed by High-Throughput Sequencing

  • Hokyung Song,
  • Ian Crawford,
  • Jonathan R. Lloyd,
  • Clare H. Robinson,
  • Christopher Boothman,
  • Keith Bower,
  • Martin Gallagher,
  • Grant Allen and
  • David Topping

29 July 2020

Primary biological aerosols often include allergenic and pathogenic microorganisms posing potential risks to human health. Moreover, there are airborne plant and animal pathogens that may have ecological and economic impact. In this study, we used hi...

  • Article
  • Open Access
8 Citations
2,870 Views
21 Pages

29 August 2022

To feed the growing human population, natural grasslands are being converted to agricultural use at a massive scale. This conversion may have consequences for soil biodiversity, but its impact on the community assembly of differentially microbial gro...

  • Article
  • Open Access
6 Citations
3,090 Views
15 Pages

This study analyzed the effects of Trichoderma harzianum on the growth of continuous cropping Lagenaria siceraria and the physical and chemical properties of rhizosphere soil and microbial community structure, using Illumina Miseq (PE300) high-throug...

  • Article
  • Open Access
14 Citations
3,675 Views
17 Pages

For a long time, the development of the Lycium barbarum industry has been seriously restricted by root rot disease. In general, the occurrence of plant root rot is considered to be closely related to the composition and diversity of the soil microbia...

  • Article
  • Open Access
2 Citations
2,179 Views
20 Pages

Diversity and Functional Insights into Endophytic Fungi in Halophytes from West Ordos Desert Ecosystems

  • Xingzhe Wang,
  • Yan Zhang,
  • Jingpeng Li,
  • Yiteng Ding,
  • Xiaodan Ma,
  • Peng Zhang,
  • Haijing Liu,
  • Jie Wei and
  • Yuying Bao

4 January 2025

Arid desert regions are among the harshest ecological environments on Earth. Halophytes, with their unique physiological characteristics and adaptability, have become the dominant vegetation in these areas. Currently, research on halophytes in this r...

  • Abstract
  • Open Access
981 Views
1 Page

The Bacterial Community and Its Shaping Mechanisms

  • Romina Ottaviani and
  • Maria Eugenia Llames

Bacterial activities drive most of the Earth’s biogeochemical cycles and, thus, much effort has been devoted to understanding the mechanisms governing their community assemblies in nature. In freshwater ecosystems, selection has been found to b...

  • Article
  • Open Access
644 Views
12 Pages

30 June 2025

This research aimed to study changes in the diversity of the soil bacterial community in a jujube forest with different years of abandonment. To this end, we took the mountain jujube forest with different abandoned years (1 a, 3 a, 6a and 20 a) in th...

  • Article
  • Open Access
30 Citations
9,268 Views
14 Pages

Evaluation of Metabarcoding Primers for Analysis of Soil Nematode Communities

  • Md. Maniruzzaman Sikder,
  • Mette Vestergård,
  • Rumakanta Sapkota,
  • Tina Kyndt and
  • Mogens Nicolaisen

9 October 2020

While recent advances in next-generation sequencing technologies have accelerated research in microbial ecology, the application of high throughput approaches to study the ecology of nematodes remains unresolved due to several issues, e.g., whether t...

  • Article
  • Open Access
5 Citations
2,366 Views
21 Pages

Effect of Bacillus amyloliquefaciens QST713 on Inter-Root Substrate Environment of Cucumber under Low-Calcium Stress

  • Bin Li,
  • Li Zhang,
  • Lincao Wei,
  • Yujie Yang,
  • Zhexuan Wang,
  • Bo Qiao and
  • Lingjuan Han

7 March 2024

(1) Background: Low-calcium stress can have adverse effects on the rhizosphere environment of cucumber, subsequently impacting cucumber growth. However, plant-growth-promoting rhizobacteria can directly or indirectly enhance plant growth and induce p...

  • Article
  • Open Access
39 Citations
5,326 Views
14 Pages

Responses of Microbial Communities and Interaction Networks to Different Management Practices in Tea Plantation Soils

  • Lin Tan,
  • Songsong Gu,
  • Shi Li,
  • Zuohua Ren,
  • Ye Deng,
  • Zhonghua Liu,
  • Zhihua Gong,
  • Wenjun Xiao and
  • Qiulong Hu

16 August 2019

Soil microorganisms play important roles in the plant health and agricultural production. However, little is known about the complex responses of microbial communities and interaction networks to different agricultural management practices in tea pla...

  • Article
  • Open Access
387 Views
20 Pages

Isolation of Endophytic Bacteria from Kentucky Bluegrass and the Biocontrol Effects of Neobacillus sp. 718 on Powdery Mildew

  • Yinping Liang,
  • Fan Wu,
  • Yining Zhang,
  • Zhanchao Guo,
  • Lingjuan Han,
  • Peng Gao,
  • Xiang Zhao and
  • Huisen Zhu

10 December 2025

Kentucky bluegrass powdery mildew, caused by the fungus Blumeria graminis f. sp. poae, is a destructive disease affecting Poa pratensis L. In this study, endophytic bacteria were isolated from the resistant Kentucky bluegrass cultivar ‘Taihang&...

  • Article
  • Open Access
1 Citations
1,794 Views
19 Pages

Microbes may play an important role in the sugarcane leaf degradation and nutrient conversion process. Soil bacterial communities are more or less involved in material transformation and nutrient turnover. In order to make better use of the vast suga...

  • Article
  • Open Access
11 Citations
3,736 Views
16 Pages

No-Antibiotic-Pectin-Based Treatment Differently Modified Cloaca Bacteriobiome of Male and Female Broiler Chickens

  • Svetlana B. Lysko,
  • Olga A. Baturina,
  • Natalia B. Naumova,
  • Nadezhda A. Lescheva,
  • Valentina I. Pleshakova and
  • Marsel R. Kabilov

As the information about the effect of pectin prebiotics on chicken gut microbiota is scarce, by using high throughput metagenomic sequencing with Illumina Miseq we examined the cloaca bacteriobiome of male and female chickens receiving antibiotic- o...