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28 Results Found

  • Article
  • Open Access
70 Citations
8,915 Views
32 Pages

Osmotic Adaptation and Compatible Solute Biosynthesis of Phototrophic Bacteria as Revealed from Genome Analyses

  • Johannes F. Imhoff,
  • Tanja Rahn,
  • Sven Künzel,
  • Alexander Keller and
  • Sven C. Neulinger

Osmotic adaptation and accumulation of compatible solutes is a key process for life at high osmotic pressure and elevated salt concentrations. Most important solutes that can protect cell structures and metabolic processes at high salt concentrations...

(This article belongs to the Special Issue Advances in the Biology of Phototrophic Bacteria)
  • Article
  • Open Access
14 Citations
8,669 Views
20 Pages

The Phosphoglycerate Kinase (PGK) Gene Family of Maize (Zea mays var. B73)

  • Julio A. Massange-Sánchez,
  • Luz E. Casados-Vázquez,
  • Sheila Juarez-Colunga,
  • Ruairidh J. H. Sawers and
  • Axel Tiessen

24 November 2020

Phosphoglycerate kinase (PGK, E.C. 2.7.2.3) interconverts ADP + 1,3-bisphospho-glycerate (1,3-bPGA) to ATP + 3-phosphoglycerate (3PGA). While most bacteria have a single pgk gene and mammals possess two copies, plant genomes contain three or more PGK...

(This article belongs to the Section Plant Physiology and Metabolism)
  • Review
  • Open Access
21 Citations
3,555 Views
15 Pages

The interplay between soil rhizobial bacteria and leguminous plants, particularly in Africa, has a profound impact on photosynthetic efficiency and overall crop productivity. This review explores the critical role of rhizobia in enhancing photosynthe...

(This article belongs to the Section Plant Microbe Interactions)
  • Review
  • Open Access
26 Citations
5,812 Views
12 Pages

9 November 2017

Land plants and other photosynthetic organisms (algae, bacteria) use the beneficial effect of sunlight as a source of energy for the photosynthesis and as a major source of information from the environment. However, the ultraviolet component of sunli...

(This article belongs to the Special Issue DNA Damage Responses in Plants)
  • Article
  • Open Access
744 Views
16 Pages

Heliobacteraceae are unique endospore-forming photosynthetic bacteria that are known for possessing the simplest photosynthetic apparatus of any known organism. More genomic and physiological analysis is needed to further understand the evolution of...

(This article belongs to the Section Environmental Microbiology)
  • Article
  • Open Access
9 Citations
5,725 Views
13 Pages

The photosynthetic bacterium Rhodopseudomonas palustris converts nitrogen gas (N2) to fertilizer ammonia (NH3) and also produces clean energy hydrogen gas (H2) from protons (H+) when it is grown anaerobically in nitrogen fixing medium with illuminati...

(This article belongs to the Section Environmental Microbiology)
  • Article
  • Open Access
1 Citations
2,099 Views
26 Pages

Nodulating Aeschynomene indica without Nod Factor Synthesis Genes: In Silico Analysis of Evolutionary Relationship

  • Mengguang Zhao,
  • Jingyi Dong,
  • Zhenpeng Zhang,
  • Entao Wang,
  • Dandan Wang,
  • Huijie Xie,
  • Chao Wang and
  • Zhihong Xie

15 June 2024

Aeschynomene indica rhizobia (AIRs) are special classes of bacteria capable of nodulating without nodulation factors and have photosynthetic capacity. With an aim to characterize the structural variations in Bradyrhizobium genomes during its evolutio...

(This article belongs to the Special Issue Rhizosphere Microorganisms—2nd Edition)
  • Article
  • Open Access
16 Citations
6,252 Views
16 Pages

30 January 2020

Eukaryotic algae are an extremely diverse category of photosynthetic organisms and some species produce highly potent bioactive compounds poisonous to humans or other animals, most notably observed during harmful algal blooms. These natural products...

(This article belongs to the Special Issue Genetics and Genomics of Marine Secondary Metabolite Gene Clusters and Their Biotechnological and Pharmaceutical Applications)
  • Article
  • Open Access
13 Citations
5,273 Views
15 Pages

15 May 2021

The Eastern Nebraska Salt Marshes contain a unique, alkaline, and saline wetland area that is a remnant of prehistoric oceans that once covered this area. The microbial composition of these salt marshes, identified by metagenomic sequencing, appears...

(This article belongs to the Section Microbiology)
  • Article
  • Open Access
1 Citations
2,218 Views
31 Pages

5 September 2025

Cyanobacterial blooms are increasingly becoming more intense and frequent, posing a public health threat globally. Drinking water treatment plants that rely on algal bloom-affected waters may create waste (water treatment residuals, WTRs) that concen...

(This article belongs to the Special Issue Harmful Algal Blooms in Waters: Characterization, Monitoring and Management)
  • Article
  • Open Access
12 Citations
3,333 Views
19 Pages

The genus Skermanella comprises important soil bacteria that are often associated with the crop rhizospheres, but its physiological traits remain poorly understood. This study characterizes Skermanella sp. TT6T, isolated from human skin, with a focus...

(This article belongs to the Section Environmental Microbiology)
  • Article
  • Open Access
3,985 Views
16 Pages

17 February 2022

In eukaryotic photosynthetic organisms, ferredoxin–thioredoxin reductases (FTRs) are key proteins reducing several types of chloroplastic thioredoxins (TRXs) in light conditions. The electron cascade necessary to reduce oxidized TRXs involves a...

(This article belongs to the Special Issue Assembly and Reactivity of Iron–Sulfur Clusters)
  • Review
  • Open Access
21 Citations
9,872 Views
15 Pages

Function and Benefits of Natural Competence in Cyanobacteria: From Ecology to Targeted Manipulation

  • Alexandra M. Schirmacher,
  • Sayali S. Hanamghar and
  • Julie A. Z. Zedler

22 October 2020

Natural competence is the ability of a cell to actively take up and incorporate foreign DNA in its own genome. This trait is widespread and ecologically significant within the prokaryotic kingdom. Here we look at natural competence in cyanobacteria,...

(This article belongs to the Special Issue Cellular and Molecular Strategies in Cyanobacterial Survival)
  • Review
  • Open Access
85 Citations
14,856 Views
12 Pages

Selenium Utilization Strategy by Microalgae

  • Hiroya Araie and
  • Yoshihiro Shiraiwa

30 November 2009

The diversity of selenoproteins raises the question of why so many life forms require selenium. Selenoproteins are found in bacteria, archaea, and many eukaryotes. In photosynthetic microorganisms, the essential requirement for selenium has been repo...

(This article belongs to the Special Issue Selenium and Tellurium Chemistry)
  • Article
  • Open Access
2 Citations
3,777 Views
17 Pages

Characterization of a Virally Encoded Flavodoxin That Can Drive Bacterial Cytochrome P450 Monooxygenase Activity

  • David C. Lamb,
  • Jared V. Goldstone,
  • Bin Zhao,
  • Li Lei,
  • Jonathan G. L. Mullins,
  • Michael J. Allen,
  • Steven L. Kelly and
  • John J. Stegeman

11 August 2022

Flavodoxins are small electron transport proteins that are involved in a myriad of photosynthetic and non-photosynthetic metabolic pathways in Bacteria (including cyanobacteria), Archaea and some algae. The sequenced genome of 0305φ8-36, a large...

(This article belongs to the Special Issue New Insights into Cytochrome P450s)
  • Article
  • Open Access
5 Citations
2,928 Views
11 Pages

Aerobic anoxygenic photosynthetic bacteria (AAPB) are a kind of heterotrophic prokaryote that can use bacteriochlorophyll (BChl) for photosynthesis without oxygen production and they are widely distributed in aquatic environments, including oceans, l...

(This article belongs to the Section Environmental Microbiology)
  • Article
  • Open Access
14 Citations
5,422 Views
14 Pages

Phylogenomics Provides New Insights into Gains and Losses of Selenoproteins among Archaeplastida

  • Hongping Liang,
  • Tong Wei,
  • Yan Xu,
  • Linzhou Li,
  • Sunil Kumar Sahu,
  • Hongli Wang,
  • Haoyuan Li,
  • Xian Fu,
  • Gengyun Zhang and
  • Huan Liu
  • + 3 authors

Selenoproteins that contain selenocysteine (Sec) are found in all kingdoms of life. Although they constitute a small proportion of the proteome, selenoproteins play essential roles in many organisms. In photosynthetic eukaryotes, selenoproteins have...

(This article belongs to the Section Molecular Genetics and Genomics)
  • Article
  • Open Access
47 Citations
10,700 Views
12 Pages

CRISPR/Cas9-Mediated Knockout of the Lycopene ε-Cyclase for Efficient Astaxanthin Production in the Green Microalga Chlamydomonas reinhardtii

  • Jacob Sebastian Kneip,
  • Niklas Kniepkamp,
  • Junhwan Jang,
  • Maria Grazia Mortaro,
  • EonSeon Jin,
  • Olaf Kruse and
  • Thomas Baier

17 May 2024

Carotenoids are valuable pigments naturally occurring in all photosynthetic plants and microalgae as well as in selected fungi, bacteria, and archaea. Green microalgae developed a complex carotenoid profile suitable for efficient light harvesting and...

(This article belongs to the Special Issue Microalgae Photobiology, Biotechnology, and Bioproduction)
  • Article
  • Open Access
27 Citations
6,648 Views
18 Pages

Insights into the Diversity of Secondary Metabolites of Planktothrix Using a Biphasic Approach Combining Global Genomics and Metabolomics

  • Sandra Kim Tiam,
  • Muriel Gugger,
  • Justine Demay,
  • Séverine Le Manach,
  • Charlotte Duval,
  • Cécile Bernard and
  • Benjamin Marie

27 August 2019

Cyanobacteria are an ancient lineage of slow-growing photosynthetic bacteria and a prolific source of natural products with diverse chemical structures and potent biological activities and toxicities. The chemical identification of these compounds re...

  • Article
  • Open Access
7 Citations
3,232 Views
20 Pages

Revealing the Existence of Diverse Strategies for Phosphorus Solubilization and Acquisition in Plant-Growth Promoting Streptomyces misionensis SwB1

  • Yunzhu Chen,
  • Zhuangzhuang Gao,
  • Yan Yang,
  • Qiang Liu,
  • Lijuan Jiang,
  • Jingzhen Chen,
  • Xiao Zhou,
  • Luhong Zhang,
  • Yuena Ji and
  • Changzhu Li
  • + 3 authors

Phosphorus deficiency poses a significant challenge to plant growth and development, particularly in red soil. To alleviate this limitation, phosphorus-solubilizing bacteria (PSB) play a crucial role by converting insoluble phosphates present in the...

(This article belongs to the Special Issue Bioinformatics and Omic Data Analysis in Microbial Research)
  • Article
  • Open Access
3 Citations
1,487 Views
22 Pages

Metagenomics and In Vitro Growth-Promoting Experiments Revealed the Potential Roles of Mycorrhizal Fungus Humicolopsis cephalosporioides and Helper Bacteria in Cheilotheca humilis Growth

  • Yawei Liu,
  • Yuhao Shang,
  • Xin Wang,
  • Xiao Li,
  • Zhiming Yu,
  • Zhanghui Zeng,
  • Zhehao Chen,
  • Lilin Wang,
  • Taihe Xiang and
  • Xiaoping Huang

In mycorrhizal symbiotic relationships, non-photosynthetic myco-heterotrophic plants are unable to supply photosynthates to their associated fungi. On the contrary, they rely on fungal carbon to sustain their own growth. Mycorrhizal fungi can mediate...

(This article belongs to the Special Issue Advances in the Plant Microbiome: Rhizosphere, Endosphere and Phyllosphere)
  • Article
  • Open Access
9 Citations
5,347 Views
16 Pages

14 December 2021

Cyanobacteria are a group of photosynthetic prokaryotes that contribute to primary production on a global scale. These microorganisms release vesicles to the extracellular environment, spherical nanosized structures, derived essentially from the oute...

(This article belongs to the Section Plant Response to Abiotic Stress and Climate Change)
  • Article
  • Open Access
1 Views
18 Pages

Soybean Growth Promotion by the Euryhaline Marine Bacterium Cobetia amphilecti KMM 296 Is Associated with Hormonal and Transcriptional Responses

  • Yulia A. Yugay,
  • Andrey A. Sadykov,
  • Olesya D. Kudinova,
  • Yulia L. Yaroshenko,
  • Alexandra V. Fialko,
  • Maria R. Sorokina,
  • Egor S. Alaverdov,
  • Elena A. Vasyutkina,
  • Tatiana V. Rusapetova and
  • Yury N. Shkryl
  • + 3 authors

20 October 2026

Marine bacteria remain insufficiently explored as potential plant bioinoculants. This study evaluated the plant growth-promoting potential of the euryhaline marine bacterium Cobetia amphilecti KMM 296 by comparing the effects of viable cells and cell...

(This article belongs to the Section Plant Physiology and Metabolism)
  • Article
  • Open Access
42 Citations
11,064 Views
25 Pages

11 October 2013

Although emerging evidence indicates that deep-sea water contains an untapped reservoir of high metabolic and genetic diversity, this realm has not been studied well compared with surface sea water. The study provided the first integrated meta-genomi...

  • Article
  • Open Access
29 Citations
6,948 Views
16 Pages

Comprehensive Analyses of Cytochrome P450 Monooxygenases and Secondary Metabolite Biosynthetic Gene Clusters in Cyanobacteria

  • Makhosazana Jabulile Khumalo,
  • Nomfundo Nzuza,
  • Tiara Padayachee,
  • Wanping Chen,
  • Jae-Hyuk Yu,
  • David R. Nelson and
  • Khajamohiddin Syed

The prokaryotic phylum Cyanobacteria are some of the oldest known photosynthetic organisms responsible for the oxygenation of the earth. Cyanobacterial species have been recognised as a prosperous source of bioactive secondary metabolites with antiba...

(This article belongs to the Special Issue Cytochromes P450: Drug Metabolism, Bioactivation and Biodiversity 2.0)
  • Review
  • Open Access
74 Citations
8,682 Views
24 Pages

15 September 2022

Carotenoids are isoprenoid-derived natural products produced in plants, algae, fungi, and photosynthetic bacteria. Most animals cannot synthesize carotenoids because the biosynthetic machinery to create carotenoids de novo is absent in animals, excep...

(This article belongs to the Special Issue Natural Products for Drug Discovery in the 21st Century: Innovations for Novel Therapeutics)
  • Article
  • Open Access
13 Citations
4,396 Views
23 Pages

1 October 2021

Among several mechanisms involved in the plant stress response, synthesis of guanosine tetra and pentaphosphates (alarmones), homologous to the bacterial stringent response, is of crucial importance. Plant alarmones affect, among others, photosynthet...

(This article belongs to the Section Molecular Plant Sciences)
  • Article
  • Open Access
9 Citations
3,328 Views
16 Pages

Genome-Wide Analysis of the Cytochrome P450 Monooxygenases in the Lichenized Fungi of the Class Lecanoromycetes

  • Gugulethu Mlambo,
  • Tiara Padayachee,
  • David R. Nelson and
  • Khajamohiddin Syed

Lichens are unique organisms that exhibit a permanent symbiosis between fungi and algae or fungi and photosynthetic bacteria. Lichens have been found to produce biotechnologically valuable secondary metabolites. A handful of studies showed that tailo...

(This article belongs to the Special Issue 10th Anniversary of Microorganisms: Past, Present and Future)