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16 pages, 1053 KB  
Article
Closely Related Escherichia coli Strains with Multiple Resistances Found on Co-Managed Pig Farms Despite Marked Differences in Farm Antimicrobial Drug Usage
by Francesca Martelli, Andrew Wales, Martina Velasova, Shaun Cawthraw, Rebecca Gosling, Luke Randall, Robert Horton, Fabrizio Lemma, Margherita Rambaldi, Fabio Ostanello, Alessia de Lucia, Roderick Card, Olivia Turner, Nathaniel Storey, Manal AbuOun and Muna Anjum
Vet. Sci. 2026, 13(4), 309; https://doi.org/10.3390/vetsci13040309 (registering DOI) - 24 Mar 2026
Abstract
Bacterial resistance on farms can be driven by antimicrobial use. Less is known about inter-farm transfer of resistance genes and their persistence under low antimicrobial pressure. Over two years and nine visits, we examined the shedding of resistant indicator bacteria (Escherichia coli [...] Read more.
Bacterial resistance on farms can be driven by antimicrobial use. Less is known about inter-farm transfer of resistance genes and their persistence under low antimicrobial pressure. Over two years and nine visits, we examined the shedding of resistant indicator bacteria (Escherichia coli) on one lower- and one higher-antimicrobial-usage pig farm. There was a unidirectional transfer of some less healthy pigs from the former to the latter. Faecal pools (180) were cultured on Chromagar ECC, with and without added cefotaxime or ciprofloxacin. Presumptive E. coli were phenotyped, and many ciprofloxacin-resistant isolates were whole-genome sequenced. Comparing farms, there was more (p < 0.0001) phenotypic resistance to the antimicrobial panel from the higher-usage unit, and markedly more (about ten-fold) multi-resistance. Significantly elevated individual drug resistances on this unit correlated with recently used antimicrobials. Ciprofloxacin and/or cefotaxime-resistant isolates were often present, although in low proportions. Neither of these antimicrobial classes had been administered recently, except for one fluoroquinolone course late in the study. AMR genes were more diverse from the higher-usage farm, but some resistant and multi-resistant isolates were closely related between farms. Thus, we demonstrated the maintenance of resistance genes in strains present on farms, even where selective pressure was low. Full article
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24 pages, 1642 KB  
Article
Virus-like and Virus Replicon Particles Targeting Multiple B-Cell Antigens Do Not Protect Against African Swine Fever Virus
by Kirill Lotonin, Obdulio García-Nicolás, Normann Kilb, Stefan Krämer, Xinyue Chang, Paul Engeroff, Kemal Mehinagic, Noelle Donzé, Francisco Brito, Matthias Liniger, Ilva Lieknina, Darja Cernova, Ieva Balta, Gabriela González-García, Paloma Rueda, Gert Zimmer, Charaf Benarafa, Nicolas Ruggli, Günter Roth, Kaspars Tars, Martin Bachmann and Artur Summerfieldadd Show full author list remove Hide full author list
Vaccines 2026, 14(3), 285; https://doi.org/10.3390/vaccines14030285 - 23 Mar 2026
Abstract
Background: African swine fever virus (ASFV) causes a fatal hemorrhagic disease in domestic pigs and wild boars. While live attenuated vaccines (LAVs) provide protection, their use raises safety concerns. Therefore, the aim of the present study was to identify viral B-cell antigens [...] Read more.
Background: African swine fever virus (ASFV) causes a fatal hemorrhagic disease in domestic pigs and wild boars. While live attenuated vaccines (LAVs) provide protection, their use raises safety concerns. Therefore, the aim of the present study was to identify viral B-cell antigens associated with protection and to test their potential using highly immunogenic vaccine delivery platforms. Methods: We employed a microarray of 169 ASFV proteins expressed in a cell-free prokaryotic system to identify immunodominant antigens using sera from immune pigs. Six structural proteins were selected and formulated into AP205 virus-like particles (VLPs). Additionally, replication-defective vesicular stomatitis virus (VSV)-based vaccine candidates expressing glycosylated CD2v and EP153R proteins were generated. Three groups of specific pathogen-free pigs were immunized with either VLP- or VSV-based vaccines and challenged with the virulent ASFV Georgia 2007 strain. Control groups included pigs immunized with the attenuated ASFV Estonia 2014 strain and a naïve group. Results: Most vaccine candidates induced detectable antibody responses against target ASFV proteins. However, neither VLP- nor VSV-based vaccines provided protection, as clinical scores, hematology, cytokine responses, and viremia levels were similar to those in the negative control group. In contrast, only the ASFV Estonia 2014 strain elicited a robust T-cell response and protective immunity. Conclusions: These findings highlight the challenges in identifying protective B-cell antigens of ASFV and emphasize the pivotal role of cellular immunity in mediating protection. Full article
(This article belongs to the Special Issue African Swine Fever Virus Vaccine Development)
17 pages, 302 KB  
Article
Degree of Breed Purity and Farm Sustainability: Effects on the Quality of Iberian Pork
by Marta Rodríguez-Fernández, Ana M. Vivar-Quintana, Carolina Reyes-Palomo, Santos Sanz-Fernández, Vicente Rodríguez-Estévez and Isabel Revilla
Sustainability 2026, 18(6), 3143; https://doi.org/10.3390/su18063143 - 23 Mar 2026
Abstract
The sustainability of livestock farming is becoming a key consideration in the European pork industry, particularly regarding the balance between intensive and extensive farming practices. This study focuses on the Iberian pig breed, assessing the pure breed and the Iberian × Duroc crossbreed [...] Read more.
The sustainability of livestock farming is becoming a key consideration in the European pork industry, particularly regarding the balance between intensive and extensive farming practices. This study focuses on the Iberian pig breed, assessing the pure breed and the Iberian × Duroc crossbreed and three production systems: intensive indoor fattening, outdoor intensive fattening, and free-range fattening, with an emphasis on their impact on both sustainability and pork quality. The quick-scan sustainability assessment tool developed within the H2020 project mEATquality was used to evaluate the environmental, social, and economic performance of each system. The results revealed that the free-range system performed best in environmental and economic sustainability, while the intensive indoor system showed higher economic stability. Significant differences in meat quality were observed based on the production system, including pH, fat and protein content, colour, texture, and fatty acid profiles. Notably, the free-range system produced pork with higher levels of MUFA and omega-3 fatty acids while intensive indoor showed a more favourable texture, while the intensive systems were associated with paler meat and higher SFA content. Indeed, the results highlighted a significant interaction between the production system × breed, indicating that the 100% Iberian is better adapted to the extensive systems. This study highlights the importance of integrating sustainability assessments with meat quality parameters to identify production methods that are both environmentally responsible and capable of meeting the consumer demand for high-quality pork. Full article
18 pages, 1824 KB  
Systematic Review
A Systematic Review and Meta-Analysis on the Global Seroprevalence of Porcine Reproductive and Respiratory Virus (PRRSV) in Pigs and Wild Boars: A Widespread and Impactful Swine Virus
by Giulia Graziosi, Consiglia Longobardi, Caterina Lupini, Elena Catelli and Gianmarco Ferrara
Vet. Sci. 2026, 13(3), 304; https://doi.org/10.3390/vetsci13030304 - 23 Mar 2026
Abstract
Porcine reproductive and respiratory virus (PRRSV) has a significant clinical and economic impact on pig farming. The purpose of this study was to assess the global seroprevalence of PRRSV in pigs and wild boars using a systematic review and meta-analysis approach. Following the [...] Read more.
Porcine reproductive and respiratory virus (PRRSV) has a significant clinical and economic impact on pig farming. The purpose of this study was to assess the global seroprevalence of PRRSV in pigs and wild boars using a systematic review and meta-analysis approach. Following the Preferred Reporting Items for Systematic Reviews and Meta-analyses (PRISMA) guidelines, a systematic review and meta-analysis on global serological data of PRRSV in pigs and wild boars was conducted. Studies published between 1993 and 2025 were searched in three electronic databases, including PubMed, Web of Science, and Scopus. A total of 86 publications, belonging to 41 countries and including 690,771 animals, were deemed eligible. Following the identification and removal of outlier studies, the pooled serological prevalence was 14% (95% CI: 9–19%), and a high between-study heterogeneity was detected (I2 = 99.9%, p < 0.000001). Subgroup analyses showed statistically significant differences according to continents, with the highest prevalence found in Asia (P: 29%, 95% CI: 16–43%), and species, with a higher prevalence in domestic pigs (P: 26%, 95% CI: 18–35%) than in wild boars (P: 2%, 95% CI: 1–3%). Overall, the information hereby presented provides an overview of the global PRRSV situation and identifies key factors associated with increased prevalence, primarily related to animal density. These insights could inform future surveillance strategies and help target interventions to mitigate the disease burden and safeguard swine health. Full article
(This article belongs to the Section Veterinary Microbiology, Parasitology and Immunology)
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20 pages, 404 KB  
Article
Multiscale Dynamics and Structured Reconstruction of Drug-Modulated Electromyographic Activity in Pigs: From Sparse Bioelectrical Topology to Neuromuscular Implications
by Krzysztof Malczewski, Ryszard Kozera, Zdzislaw Gajewski and Maria Sady
Appl. Sci. 2026, 16(6), 3066; https://doi.org/10.3390/app16063066 - 22 Mar 2026
Abstract
Electromyographic (EMG) signals encode complex spatiotemporal dynamics reflecting neuromuscular coordination and pharmacological modulation. This study introduces a unified Hankel–topological framework for reconstructing and analyzing long-duration EMG recordings acquired from pigs under pharmacological influence, and for quantifying their bioelectrical organization. The method couples low-rank [...] Read more.
Electromyographic (EMG) signals encode complex spatiotemporal dynamics reflecting neuromuscular coordination and pharmacological modulation. This study introduces a unified Hankel–topological framework for reconstructing and analyzing long-duration EMG recordings acquired from pigs under pharmacological influence, and for quantifying their bioelectrical organization. The method couples low-rank Hankel representations—capturing temporal redundancy and smoothness—with topological continuity constraints that stabilize activity packets defined by 5 s silence intervals. Six pigs were recorded across four experimental sessions (24 h each; four channels), and envelope reconstruction was performed using an ADMM-based solver. Quantitative analysis revealed consistent post-drug reductions in the packet rate (24.9%), the mean duration (2.3 s), the amplitude (0.16 a.u.), the effective Hankel rank (3.0), and topological diversity (Δβ0=1.2; all p<0.01). Deeper channels exhibited stronger suppression (interaction p<0.02), suggesting depth-dependent neuromuscular effects. The proposed framework unifies dynamical, statistical, and topological perspectives on EMG structure and yields interpretable biomarkers of neuromuscular inhibition and recovery. More broadly, it provides a generalizable signal processing methodology for analyzing structured, noisy physiological time series beyond EMG. Full article
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28 pages, 6887 KB  
Article
An Automatic Scoring Method for Swine Leg Structure Based on 3D Point Clouds
by Yongqi Han, Youjun Yue, Xianglong Xue, Mingyu Li, Yikai Fan, Simon X. Yang, Daniel Morris, Qifeng Li and Weihong Ma
Agriculture 2026, 16(6), 706; https://doi.org/10.3390/agriculture16060706 - 22 Mar 2026
Abstract
The leg structure of swine is closely related to their robustness and longevity. Animals with sound legs generally have longer productive lifespans and higher reproductive efficiency, whereas leg defects can markedly impair performance and shorten service life. To address the high subjectivity, low [...] Read more.
The leg structure of swine is closely related to their robustness and longevity. Animals with sound legs generally have longer productive lifespans and higher reproductive efficiency, whereas leg defects can markedly impair performance and shorten service life. To address the high subjectivity, low efficiency, and poor consistency of traditional leg-structure evaluation by humans, this study developed an automatic scoring system for swine leg structure based on 3D point clouds. The hardware components of the system include the acquisition channel, a multi-view time-of-flight (ToF) depth camera array, an industrial computer, and a star-type synchronization hub. The core algorithm modules include point cloud preprocessing, leg segmentation, geometric feature extraction, and structure-based scoring. Body orientation was corrected using principal component analysis (PCA). An adaptive limb region segmentation method was proposed that combines iterative cropping with geometric verification. Two point cloud tasks were performed: key structural points were extracted via multi-scale curvature analysis, and angular and symmetry parameters of the fore- and hindlimbs were computed in the sagittal and coronal planes. Following a “classify first, then score” strategy, a nine-level linear scoring model was constructed. Field validation showed that the classification accuracy exceeded 90%, the scores were significantly negatively correlated with the degree of structural deviation, and multi-frame resampling yielded good repeatability. The processing time per animal ranged from 1.6 s to 3.0 s, which met the requirements for real-time applications. These results demonstrated that the proposed method could automatically identify and quantitatively evaluate swine leg structure, providing efficient and reliable technical support for objective selection and smart pig farming. Full article
(This article belongs to the Section Artificial Intelligence and Digital Agriculture)
24 pages, 3321 KB  
Article
Investigation of the Influence of Wetting Ability of the Sprayed Surface of the Heat Exchanger on the Process of Evaporative Cooling
by Ivan Ignatkin, Nikolay Shevkun and Dmitry Skorokhodov
Thermo 2026, 6(1), 20; https://doi.org/10.3390/thermo6010020 - 20 Mar 2026
Abstract
Ensuring the required microclimate parameters is the most critical task in hot climates. In pig farms, air cooling is provided by means of steam-compression chillers or evaporative cooling, which is the simplest way to cool the air. The implementation of evaporative cooling depends [...] Read more.
Ensuring the required microclimate parameters is the most critical task in hot climates. In pig farms, air cooling is provided by means of steam-compression chillers or evaporative cooling, which is the simplest way to cool the air. The implementation of evaporative cooling depends largely on the interaction of the media involved in this process. This paper considers the process of interaction of cooling water with the surface of a cellular polycarbonate heat exchanger. A mathematical model describing the process of wetting the sprayed surface of the heat exchanger is obtained. The authors determined the theoretical water flow rate required to provide air cooling for a given operation mode. Experimental trials of a recuperative heat recovery unit with a heat exchanger made of cellular polycarbonate equipped with a water evaporative cooling system were carried out. The authors conducted a comparative assessment to evaluate the effectiveness of evaporative cooling in a heat recovery unit equipped with a polycarbonate heat exchanger versus panel evaporative systems using wetted paper pads at pig farms in the Vladimir and Tambov regions of Russia. The panel evaporative coolers provided a temperature reduction of 11.3 °C without any splashing effect. Under the same operating conditions, the heat recovery unit achieved an inlet air temperature reduction of 10.5 °C, accompanied by splashing. When the water flow rate supplied for evaporation was reduced until the splashing ceased, the cooling temperature drop decreased to 10.1 °C, which is 11% lower, compared with the paper pads. The study revealed characteristic operating modes for the unit that ensure effective air cooling, depending on the cooling water flow rate. Since the prevailing temperature during the system’s main operating time is significantly lower than the design temperature (the absolute temperature maximum), to achieve effective cooling of the supply air without splashing or excessive water waste, the cooling circuit water should circulate at a flow rate within 40 to 63% of the maximum design value. Alternatively, an automated control system should be employed to regulate the water supply based on outdoor air temperature and humidity. Full article
(This article belongs to the Topic Clean Energy Technologies and Assessment, 2nd Edition)
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26 pages, 21394 KB  
Article
Intestinal Development in Wuzhishan Pigs at Different Growth Phases: Insights from Microbiome and Metabolomics
by Jing Fan, Xinyu Xue, Haojie Zhang, Feng Wang, Zhe Chao, Limin Wei, Hailong Liu, Yuwei Ren and Ruiping Sun
Animals 2026, 16(6), 976; https://doi.org/10.3390/ani16060976 - 20 Mar 2026
Abstract
Wuzhishan pigs are a typical Chinese indigenous miniature pig breed, with thin skin and high amino acid content in muscle; slow weight gain and long feeding phases limit their value. As the primary digestive and absorptive organ, the intestine is crucial for growth, [...] Read more.
Wuzhishan pigs are a typical Chinese indigenous miniature pig breed, with thin skin and high amino acid content in muscle; slow weight gain and long feeding phases limit their value. As the primary digestive and absorptive organ, the intestine is crucial for growth, yet current studies on its development are limited. This study aimed to investigate intestinal physiological differences in Wuzhishan pigs across four phases (pre-weaning: 7, 14 days; weaning: 35, 38, 45 days; fattening: 70, 100 days; maturity: 180, 240 days) by evaluating intestinal morphology, digestive enzyme activity, gut microbiota diversity via 16S rRNA gene sequencing, and metabolite characteristics via metabolomic analysis. Results showed poor intestinal morphology and enzyme activity during weaning, significant ileal and colonic microbial diversity differences across phases, increased beneficial bacteria with age, and enriched opportunistic pathogens (Streptococcus, Romboutsia, Terrisporobacter) during weaning; weaning also had lower lipid metabolites, correlated with decreased Fusobacterium, Lactobacillus, and Muribaculaceae. Fattening enhanced amino acid metabolism, with increased Lactobacillus correlated with higher amino acids and muscle-related metabolites, while maturity increased immune-related metabolites (e.g., pyridoxine) in the vitamin B6 pathway. These results explain delayed rapid weight gain in Wuzhishan pigs and provide a theoretical basis for maintaining intestinal stability and production performance. Full article
(This article belongs to the Section Pigs)
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27 pages, 7107 KB  
Systematic Review
Computer Vision-Based Detection of Agonistic Behaviors in Pigs: Advances and Applications for Precision Livestock Farming
by Md Kamrul Hasan, Hong-Seok Mun, Ahsan Mehtab, Jin-Gu Kang, Md Sharifuzzaman, Eddiemar B. Lagua, Young-Hwa Kim, Hae-Rang Park and Chul-Ju Yang
Agriculture 2026, 16(6), 700; https://doi.org/10.3390/agriculture16060700 - 20 Mar 2026
Abstract
Agonistic behaviors such as aggression, ear biting, and tail biting remain major challenges for pig welfare, particularly during the weaning and growing periods. Computer vision (CV) technologies are emerging as scalable tools for non-invasive monitoring of these behaviors. This systematic review summarizes recent [...] Read more.
Agonistic behaviors such as aggression, ear biting, and tail biting remain major challenges for pig welfare, particularly during the weaning and growing periods. Computer vision (CV) technologies are emerging as scalable tools for non-invasive monitoring of these behaviors. This systematic review summarizes recent advances in CV-based detection of agonistic behaviors in pigs and identifies factors influencing their reliability and commercial adoption. Following the preferred reporting items for systematic reviews and meta-analyses (PRISMA) guidelines, a structured search of Scopus, Web of Science, and PubMed identified 42 eligible studies. Most studies employ deep learning approaches, including you only look once (YOLO)-based detectors and spatio-temporal models, achieving detection accuracy of up to 97% for behaviors such as head knocking, head-to-body pushing, and tail biting, typically evaluated under controlled conditions using mAP@0.5. Three key findings emerged: rapid progress in deep learning-based detection; methodological heterogeneity in behavioral definitions, validation strategies, and annotation protocols; and a gap between high detection accuracy and demonstrated improvements in welfare or productivity. Progress is limited by scarce cross-farm validation, inconsistent bout definitions, reliance on manual annotations, and weak integration with physiological and production indicators. Future research should prioritize standardized behavioral definitions, multimodal integration, predictive modeling, and rigorous external validation. Full article
(This article belongs to the Special Issue Computer Vision Analysis Applied to Farm Animals)
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14 pages, 1082 KB  
Article
Pharmacokinetics of Lekethromycin in Swine Following Intramuscular Administration at Different Doses with a Single Intravenous Reference Dose for Absolute Bioavailability and Matrix Comparison
by Qinyao Wu, Zeyu Wen, Jinyan Meng, Runlin Yu, Nuoyu Xu, Lu Zhang, Degang Zhou and Xingyuan Cao
Vet. Sci. 2026, 13(3), 294; https://doi.org/10.3390/vetsci13030294 - 20 Mar 2026
Abstract
Lekethromycin (LKMS) is a novel macrolide veterinary antimicrobial. Its propensity for intracellular accumulation causes discrepancies between whole blood and plasma concentrations, complicating pharmacokinetic evaluations. This study compared the pharmacokinetic characteristics, dose proportionality, and bioavailability of LKMS in whole blood and plasma following intramuscular [...] Read more.
Lekethromycin (LKMS) is a novel macrolide veterinary antimicrobial. Its propensity for intracellular accumulation causes discrepancies between whole blood and plasma concentrations, complicating pharmacokinetic evaluations. This study compared the pharmacokinetic characteristics, dose proportionality, and bioavailability of LKMS in whole blood and plasma following intramuscular administration in pigs. Forty-two healthy pigs received LKMS via a single intravenous reference dose (5 mg/kg) for absolute bioavailability estimation or intramuscular (1, 2.5, 5, and 10 mg/kg) injection. Pharmacokinetic parameters were calculated using non-compartmental analysis, and dose proportionality was evaluated via a power model. LKMS exhibited rapid absorption and slow elimination, with a plasma half-life of 49.25 to 67.63 h. Whole blood exposure and peak concentrations were 1.5 to 3 times higher than in plasma, indicating extensive blood cell partitioning. As the intramuscular dose increased, the whole blood-to-plasma concentration ratio decreased from 2.83 to 1.15, suggesting a saturable cell uptake mechanism. Consequently, LKMS exhibited non-linear pharmacokinetics in whole blood but demonstrated linear, dose-proportional pharmacokinetics in plasma. Absolute bioavailability based on plasma ranged from 83.2% to 119.5%. Due to saturable blood cell binding, plasma is the optimal matrix for accurately evaluating LKMS systemic exposure and bioavailability in swine. Full article
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30 pages, 3963 KB  
Article
Energy and Mass Balance Assessment of a Microalgae-Based Biomethane Biorefinery: Mesophilic Design vs. Psychrophilic Operation in a Pilot Plant
by María del Carmen Suárez Rodríguez, María-Pilar Martínez-Hernando, David Bolonio, Marcelo F. Ortega, Pedro Mora and María-Jesús García-Martínez
Energies 2026, 19(6), 1541; https://doi.org/10.3390/en19061541 - 20 Mar 2026
Abstract
Decentralized biomethane is vital for the energy transition; however, small-scale plants face significant energy penalties. This study evaluates the mass and energy balance of a TRL 6 pilot biorefinery treating pig manure, integrating anaerobic digestion with a microalgae-based photobioreactor coupled to an absorption [...] Read more.
Decentralized biomethane is vital for the energy transition; however, small-scale plants face significant energy penalties. This study evaluates the mass and energy balance of a TRL 6 pilot biorefinery treating pig manure, integrating anaerobic digestion with a microalgae-based photobioreactor coupled to an absorption column for biogas upgrading (>93 vol% CH4, dry basis). A Life Cycle Inventory (LCI) was used to compared a theoretical mesophilic design (Scenario I, 35 °C) against an experimental psychrophilic baseline (Scenario II, avg. 12 °C). The results indicate that while winter mesophilic heating consumes 58% of gross energy production, the passive psychrophilic strategy eliminates this demand, ensuring a positive Net Energy Balance year-round. Both scenarios achieved competitive Specific Energy Consumption (SEC) (1.20 vs. 4.17 kWh·m−3 CH4), while upgrading reached peak efficiency at a 10 min Hydraulic Residence Time. Furthermore, solar-synchronized load-shifting allowed for 100% electrical self-sufficiency. We conclude that although passive operation offers a superior Energy Return on Investment during cold periods (average EROI of 2.35 vs. 1.44 under winter mesophilic conditions), active mesophilic heating yields a 3-fold revenue increase, making it the superior economic choice despite the thermal penalty. Full article
(This article belongs to the Special Issue Renewable Fuels: A Key Step Towards Global Sustainability)
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22 pages, 7223 KB  
Article
Composite Probiotic Fermented Feed Enhances Growth Performance and Intestinal Health in Weaned Piglets by Modulating the Gut Microbiome and Metabolome
by Zifan Wang, Zhimin Lin, Binbin Lin, Song Peng, Yijuan Xu, Xiuzhen Wang, Huini Wu, Bilin Xie, Bihong Chen, Mengshi Zhao, Fengqiang Lin, Tiecheng Sun and Zhaolong Li
Animals 2026, 16(6), 972; https://doi.org/10.3390/ani16060972 - 20 Mar 2026
Abstract
This study investigated the effects of compound microbial fermented feed on the growth performance, intestinal architecture, microbiota composition, and metabolic profiles of weaned piglets. Fifty-four weaned piglets were randomly allocated to three dietary treatment groups: a control group (basal diet), a 50% fermented [...] Read more.
This study investigated the effects of compound microbial fermented feed on the growth performance, intestinal architecture, microbiota composition, and metabolic profiles of weaned piglets. Fifty-four weaned piglets were randomly allocated to three dietary treatment groups: a control group (basal diet), a 50% fermented feed group (T1), and a 100% fermented feed group (T2), for a 33-day feeding period. The results indicated that both T1 and T2 diets significantly improved final body weight and average daily gain (ADG), while decreasing the feed-to-gain ratio (F/G) compared with the control (p < 0.05). Morphological assessment revealed that the T1 group significantly elevated the villus height-to-crypt depth ratio in the jejunum and increased the density of goblet cells in the cecum and colon (p < 0.05). Multi-omics analysis indicated that fermented feed significantly reshaped the gut microbiota structure (p < 0.05), characterized by the enrichment of beneficial taxa, including Oscillospiraceae and Lachnospiraceae (p < 0.05), and the modulation of nucleotide and bile acid metabolism. Furthermore, correlation analysis identified significant linkages between the abundance of jejunal Oscillospiraceae and colonic/cecal Lactobacillus with growth performance, intestinal morphology, and key metabolites. This finding systematically elucidates the mechanisms by which compound microbial fermented feed promotes growth and intestinal health in weaned piglets via microbiota-mediated pathways, offering a robust scientific framework for the development of antibiotic-free nutritional strategies. Full article
(This article belongs to the Section Pigs)
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14 pages, 1688 KB  
Article
Oral Islatravir in Macaques Decreases Lymphocytes and Monocytes and Is Associated with Immune Alterations
by Michele B. Daly, Daniel Kim, Seidu Inusah, Dawn Little, Jiyoung S. Kim, Natalia Makarova, Tiancheng E. Edwards, James Mitchell, Walid Heneine, Yi Pan, Charles W. Dobard and J. Gerardo García-Lerma
Pharmaceutics 2026, 18(3), 381; https://doi.org/10.3390/pharmaceutics18030381 - 20 Mar 2026
Abstract
Background: Islatravir (ISL) is a first-in-class nucleoside reverse transcriptase translocation inhibitor with high potency and long half-life in peripheral blood mononuclear cells (PBMCs). However, treatment and prevention of HIV with oral ISL in humans has been associated with decreases in total lymphocytes, CD4 [...] Read more.
Background: Islatravir (ISL) is a first-in-class nucleoside reverse transcriptase translocation inhibitor with high potency and long half-life in peripheral blood mononuclear cells (PBMCs). However, treatment and prevention of HIV with oral ISL in humans has been associated with decreases in total lymphocytes, CD4 T-cells, and B-cells in a dose-dependent manner. We investigated in macaques the effects of oral ISL on lymphocytes, monocytes, granulocytes, and gene expression in PBMCs. Methods: Female pig-tailed macaques (n = 5) received an HIV pre-exposure prophylaxis dose of oral ISL adjusted allometrically once a week for 12 weeks. Complete blood counts and B- and T-cells were monitored prior to, during, and after ISL treatment, and changes in counts were evaluated by using a repeated measures model. Changes in gene expression were investigated in PBMCs during treatment and following treatment discontinuation. Results: ISL treatment was associated with declines in lymphocytes (11.9%, p = 0.0015) and monocytes (22.4%, p = 0.0003), but not granulocytes (0.3%, p = 0.9781). Total lymphocytes and monocytes returned to pre-treatment levels 6 weeks after treatment cessation (p = 0.8244 and p = 0.4620, respectively). Lymphocyte subpopulation analyses showed a significant decline in CD8 (−18.4%, p = 0.0364) and CD20 (−35.3%; p = 0.0002) cells but not CD4 cells (−7.4%; p = 0.3470). Gene set enrichment analysis showed negative enrichment (padj < 0.05) of gene pathways associated with immune regulation, cell proliferation, and inflammation. Conclusions: ISL treatment resulted in significant reductions in lymphocytes reproducing clinical toxicity. This effect was reversed after treatment cessation as observed in humans. Our results highlight the value of the macaque model to study immune alterations at the preclinical stage. Full article
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26 pages, 24758 KB  
Article
Enhancing Pig Behavior Recognition in Complex Environments: A Transfer Learning-Assisted YOLO11 Network with Wavelet Convolution and Synergistic Attention
by Taoyang Wang, Yu Hu and Hua Yin
Animals 2026, 16(6), 964; https://doi.org/10.3390/ani16060964 - 19 Mar 2026
Abstract
Pig behavior recognition plays a vital role for early disease detection, animal welfare evaluation, and precision agriculture. Current deep learning methods tend to be complex, parameter intensive, or lack generalization in unstructured farming scenarios, hindering their deployment on resource-limited devices. To address this [...] Read more.
Pig behavior recognition plays a vital role for early disease detection, animal welfare evaluation, and precision agriculture. Current deep learning methods tend to be complex, parameter intensive, or lack generalization in unstructured farming scenarios, hindering their deployment on resource-limited devices. To address this issue, we propose three optimizations based on the lightweight YOLO11n: (1) embed SCSA-CBAM in C3k2 layers to enhance multi-scale feature discrimination; (2) introduce WFU in the neck for dynamic cross-scale feature integration; and (3) replace standard convolutions in the backbone with WTConv to reduce the computational overhead. Initialized with COCO pre-trained weights, the proposed model employs a two-stage transfer learning approach combined with data augmentation. On a self-built six-category pig behavior dataset based on public datasets of 2480 original images (split into training/validation sets at an 8:2 ratio via stratified random sampling), the optimized YOLO11n-SCSA-WFU-WT achieves an mAP@0.5 of 0.974 and mAP@0.5:0.95 of 0.785, with 3.40 M parameters, 7.8 GFLOPs, and 72.28 FPS, while achieving substantial accuracy improvements over the baseline and maintaining lightweight performance over the baseline. Ablation experiments verify the independent contributions of each module, and comparisons with mainstream models demonstrate a more favorable accuracy–efficiency trade-off. The overall results confirm the effectiveness of our method, which facilitates real-time pig behavior detection in future smart livestock management. Full article
(This article belongs to the Section Animal System and Management)
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16 pages, 3953 KB  
Article
PDGFD: A Dual-Function Regulator That Maintains Myoblast Pool and Fuels Myogenic Differentiation
by Hongzhen Cao, Jing Wang, Yunzhou Wang, Jingsen Huang, Wei Chen, Hui Tang, Junfeng Chen, Baosong Xing and Yongqing Zeng
Curr. Issues Mol. Biol. 2026, 48(3), 322; https://doi.org/10.3390/cimb48030322 - 18 Mar 2026
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Abstract
The role of platelet-derived growth factor D (PDGFD) in mesenchymal cells is well-established, but its specific function in skeletal muscle generation remains unknown. This study reveals for the first time PDGFD’s dual regulatory role in myogenesis: it acts both as a [...] Read more.
The role of platelet-derived growth factor D (PDGFD) in mesenchymal cells is well-established, but its specific function in skeletal muscle generation remains unknown. This study reveals for the first time PDGFD’s dual regulatory role in myogenesis: it acts both as a “guardian” maintaining the myoblast pool and as an “initiator” driving myogenic differentiation. Through single-cell RNA sequencing analysis of skeletal muscle from Jiangquan Black pigs, we identified PDGFD as a common candidate gene for both muscle and fat development. In the C2C12 cell model, PDGFD knockdown significantly inhibited cell proliferation and promoted apoptosis, while overexpression enhanced viability and inhibited apoptosis, indicating its critical role in maintaining myoprogenic precursor cell homeostasis. Further studies revealed that PDGFD interference downregulated key myogenic differentiation markers MyoD and MyoG, inhibiting differentiation. Its expression peaked during mid-differentiation (D5), suggesting temporal regulation of differentiation. Interestingly, although PDGFD primarily acts through the PI3K/Akt pathway downstream of PDGFR-β, PDGFD knockdown did not show significant synergistic effects with PI3K/Akt pathway activation in inhibiting differentiation. This suggests PDGFD may specifically regulate myogenic differentiation via an independent or parallel signaling axis. This study not only expands the known functions of PDGFD in muscle biology but also provides new insights into the mechanisms by which growth factors coordinate cell fate decisions. Full article
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