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10,159 Results Found

  • Article
  • Open Access
16 Citations
6,208 Views
10 Pages

Survey of Candidate Genes for Maize Resistance to Infection by Aspergillus flavus and/or Aflatoxin Contamination

  • Leigh K. Hawkins,
  • Marilyn L. Warburton,
  • Juliet D. Tang,
  • John Tomashek,
  • Dafne Alves Oliveira,
  • Oluwaseun F. Ogunola,
  • J. Spencer Smith and
  • W. Paul Williams

31 January 2018

Many projects have identified candidate genes for resistance to aflatoxin accumulation or Aspergillus flavus infection and growth in maize using genetic mapping, genomics, transcriptomics and/or proteomics studies. However, only a small percentage of...

  • Systematic Review
  • Open Access
23 Citations
8,325 Views
18 Pages

A Systematic Review of Candidate Genes for Major Depression

  • Audrone Norkeviciene,
  • Romena Gocentiene,
  • Agne Sestokaite,
  • Rasa Sabaliauskaite,
  • Daiva Dabkeviciene,
  • Sonata Jarmalaite and
  • Giedre Bulotiene

14 February 2022

Background and Objectives: The aim of this systematic review was to analyse which candidate genes were examined in genetic association studies and their association with major depressive disorder (MDD). Materials and Methods: We searched PUBMED for r...

  • Article
  • Open Access
1 Citations
2,221 Views
18 Pages

11 November 2024

As the most important organ for photosynthesis, leaves provide the main energy source for plant growth. Leaf traits affect light energy utilization and, thus, plant development and biomass. Given the high morphological variability of leaves between a...

  • Review
  • Open Access
21 Citations
4,443 Views
31 Pages

Candidate Genes for Eyelid Myoclonia with Absences, Review of the Literature

  • Sonia Mayo,
  • Irene Gómez-Manjón,
  • Fco. Javier Fernández-Martínez,
  • Ana Camacho,
  • Francisco Martínez and
  • Julián Benito-León

Eyelid myoclonia with absences (EMA), also known as Jeavons syndrome (JS) is a childhood onset epileptic syndrome with manifestations involving a clinical triad of absence seizures with eyelid myoclonia (EM), photosensitivity (PS), and seizures or el...

  • Article
  • Open Access
2 Citations
2,722 Views
12 Pages

Cross-Disorder Analysis of De Novo Variants Increases the Power of Prioritising Candidate Genes

  • Kuokuo Li,
  • Zhengbao Ling,
  • Tengfei Luo,
  • Guihu Zhao,
  • Qiao Zhou,
  • Xiaomeng Wang,
  • Kun Xia,
  • Jinchen Li and
  • Bin Li

12 March 2021

De novo variants (DNVs) are critical to the treatment of neurodevelopmental disorders (NDDs). However, effectively identifying candidate genes in small cohorts is challenging in most NDDs because of high genetic heterogeneity. We hypothesised that in...

  • Article
  • Open Access
25 Citations
8,031 Views
16 Pages

Identification of Inherited Retinal Disease-Associated Genetic Variants in 11 Candidate Genes

  • Galuh D. N. Astuti,
  • L. Ingeborgh Van den Born,
  • M. Imran Khan,
  • Christian P. Hamel,
  • Béatrice Bocquet,
  • Gaël Manes,
  • Mathieu Quinodoz,
  • Manir Ali,
  • Carmel Toomes and
  • Martin McKibbin
  • + 7 authors

10 January 2018

Inherited retinal diseases (IRDs) display an enormous genetic heterogeneity. Whole exome sequencing (WES) recently identified genes that were mutated in a small proportion of IRD cases. Consequently, finding a second case or family carrying pathogeni...

  • Article
  • Open Access
5 Citations
7,148 Views
15 Pages

Mining Novel Candidate Imprinted Genes Using Genome-Wide Methylation Screening and Literature Review

  • Adriano Bonaldi,
  • André Kashiwabara,
  • Érica S.de Araújo,
  • Lygia V. Pereira,
  • Alexandre R. Paschoal,
  • Mayra B. Andozia,
  • Darine Villela,
  • Maria P. Rivas,
  • Claudia K. Suemoto and
  • Carlos A. Pasqualucci
  • + 8 authors

13 September 2017

Large-scale transcriptome and methylome data analyses obtained by high-throughput technologies have been enabling the identification of novel imprinted genes. We investigated genome-wide DNA methylation patterns in multiple human tissues, using a hi...

  • Article
  • Open Access
6 Citations
2,922 Views
14 Pages

A Genome-Wide Search for Candidate Genes of Meat Production in Jalgin Merino Considering Known Productivity Genes

  • Alexander Krivoruchko,
  • Alexander Surov,
  • Antonina Skokova,
  • Anastasiya Kanibolotskaya,
  • Tatiana Saprikina,
  • Maxim Kukharuk and
  • Olesya Yatsyk

26 July 2022

In a group of Jalgin merino rams with no significant influence on the dispersion of the phenotypes of known productivity genes (MSTN, MEF2B, FABP4, etc.), a genome-wide search for associations of individual polymorphisms with intravital indicators of...

  • Article
  • Open Access
28 Citations
5,889 Views
28 Pages

Identification of Candidate Genes Regulating Drought Tolerance in Pearl Millet

  • Animikha Chakraborty,
  • Aswini Viswanath,
  • Renuka Malipatil,
  • Janani Semalaiyappan,
  • Priya Shah,
  • Swarna Ronanki,
  • Abhishek Rathore,
  • Sumer Pal Singh,
  • Mahalingam Govindaraj and
  • Vilas A. Tonapi
  • + 1 author

Pearl millet is an important crop of the arid and semi-arid ecologies to sustain food and fodder production. The greater tolerance to drought stress attracts us to examine its cellular and molecular mechanisms via functional genomics approaches to au...

  • Article
  • Open Access
2 Citations
2,159 Views
16 Pages

Candidate Genes and Favorable Haplotypes Associated with Iron Toxicity Tolerance in Rice

  • Siyu Miao,
  • Jingbing Lu,
  • Guogen Zhang,
  • Jing Jiang,
  • Pingping Li,
  • Yukang Qian,
  • Wensheng Wang,
  • Jianlong Xu,
  • Fan Zhang and
  • Xiuqin Zhao

Iron (Fe) toxicity is a major issue adversely affecting rice production worldwide. Unfortunately, the physiological and genetic mechanisms underlying Fe toxicity tolerance in rice remain relatively unknown. In this study, we conducted a genome–...

  • Review
  • Open Access
1 Citations
5,054 Views
15 Pages

Coloration in Equine: Overview of Candidate Genes Associated with Coat Color Phenotypes

  • Xiaotong Liu,
  • Yongdong Peng,
  • Xinhao Zhang,
  • Xinrui Wang,
  • Wenting Chen,
  • Xiyan Kou,
  • Huili Liang,
  • Wei Ren,
  • Muhammad Zahoor Khan and
  • Changfa Wang

17 June 2024

Variation in coat color among equids has attracted significant interest in genetics and breeding research. The range of colors is primarily determined by the type, concentration, and distribution of melanin pigments, with the balance between eumelani...

  • Article
  • Open Access
13 Citations
4,055 Views
12 Pages

Detection of Candidate Genes Associated with Fecundity through Genome-Wide Selection Signatures of Katahdin Ewes

  • Reyna Sánchez-Ramos,
  • Mitzilin Zuleica Trujano-Chavez,
  • Jaime Gallegos-Sánchez,
  • Carlos Miguel Becerril-Pérez,
  • Said Cadena-Villegas and
  • César Cortez-Romero

13 January 2023

One of the strategies to genetically improve reproductive traits, despite their low inheritability, has been the identification of candidate genes. Therefore, the objective of this study was to detect candidate genes associated with fecundity through...

  • Article
  • Open Access
474 Views
20 Pages

GWAS Reveals Key Candidate Genes Associated with Milk-Production in Saanen Goats

  • Fu Li,
  • Yonglong He,
  • Hanbing Yan,
  • Jiaqi Bu,
  • Zhanhang Wang,
  • Xiaolong Xu,
  • Danni Li,
  • Binyun Cao and
  • Xiaopeng An

13 November 2025

Milk-production is one of the most important economic traits in dairy goats. Fundamentally, increasing milk-production at the genetic level can provide potential genetic markers for improving milk-production in dairy goats. Previous studies have show...

  • Article
  • Open Access
17 Citations
3,323 Views
12 Pages

Identification of New Candidate Genes Related to Semen Traits in Duroc Pigs through Weighted Single-Step GWAS

  • Xiaoke Zhang,
  • Qing Lin,
  • Weili Liao,
  • Wenjing Zhang,
  • Tingting Li,
  • Jiaqi Li,
  • Zhe Zhang,
  • Xiang Huang and
  • Hao Zhang

20 January 2023

Semen traits play a key role in the pig industry because boar semen is widely used in purebred and crossbred pigs. The production of high-quality semen is crucial to ensuring a good result in artificial insemination. With the wide application of arti...

  • Article
  • Open Access
5 Citations
3,148 Views
20 Pages

Identification of Genomic Loci and Candidate Genes Related to Seed Tocopherol Content in Soybean

  • Suprio Ghosh,
  • Shengrui Zhang,
  • Muhammad Azam,
  • Kwadwo Gyapong Agyenim-Boateng,
  • Jie Qi,
  • Yue Feng,
  • Yecheng Li,
  • Jing Li,
  • Bin Li and
  • Junming Sun

27 June 2022

Soybean seeds are primary sources of natural tocopherols used by the food and pharmaceutical industries, owing to their beneficial impacts on human health. Selection for higher tocopherol contents in seeds along with other desirable traits is an impo...

  • Article
  • Open Access
2 Citations
1,546 Views
17 Pages

24 May 2025

Background: As one of the most important poultry species worldwide, chickens provide substantial amounts of meat, eggs, and other products for human consumption. With continuous improvements in living standards, consumer demand for high-quality anima...

  • Article
  • Open Access
1 Citations
1,979 Views
12 Pages

Identification of Candidate Genes for English Grain Aphid Resistance from QTLs Using a RIL Population in Wheat

  • Mingxia Zhang,
  • Zhenzhen Chen,
  • Haimeng Wu,
  • Fanmei Kong,
  • Baojin Guo,
  • Yijun Wang,
  • Qi Zhao,
  • Huiyan Xu,
  • Hui Wang and
  • Ping Huang
  • + 4 authors

21 March 2024

The English grain aphid (EGA) (Sitobion avenae F.) is one of the most destructive species of aphids in wheat- (Triticum aestivum L.) planting areas worldwide. Large quantities of insecticides are usually used to control aphid damage. The id...

  • Review
  • Open Access
7 Citations
4,690 Views
12 Pages

Candidate Genes in Bull Semen Production Traits: An Information Approach Review

  • Mamokoma Cathrine Modiba,
  • Khathutshelo Agree Nephawe,
  • Khanyisile Hadebe Mdladla,
  • Wenfa Lu and
  • Bohani Mtileni

23 March 2022

Semen quality plays a crucial role in the successful implementation of breeding programs, especially where artificial insemination (AI) is practiced. Bulls with good semen traits have good fertility and can produce a volume of high semen per ejaculat...

  • Article
  • Open Access
15 Citations
3,449 Views
16 Pages

Candidate Genes for Freezing and Drought Tolerance Selected on the Basis of Proteome Analysis in Doubled Haploid Lines of Barley

  • Magdalena Wójcik-Jagła,
  • Marcin Rapacz,
  • Ewa Dubas,
  • Monika Krzewska,
  • Przemysław Kopeć,
  • Anna Nowicka,
  • Agnieszka Ostrowska,
  • Sabina Malaga and
  • Iwona Żur

Plant tolerance to environmental stress is determined by a very complicated network composed of many intra- and extracellular factors. The aim of this study was to select candidate genes involved in responses to freezing and drought in barley on the...

  • Article
  • Open Access
8 Citations
5,848 Views
15 Pages

Cleft lip and palate are common congenital pathologies that affect the human population worldwide. The formation of cleft lip is associated with multiple genes and their coded proteins, which regulate the development of craniofacial region, but the e...

  • Article
  • Open Access
2 Citations
1,501 Views
22 Pages

Genome-Wide Association Study to Identify Soybean Lodging Resistance Loci and Candidate Genes

  • Zicong Liang,
  • Nianhua Qi,
  • Ruoning Li,
  • Ruijia Gao,
  • Junxia Huang,
  • Wei Zhao,
  • Huijun Zhang,
  • Haiying Wang,
  • Xue Ao and
  • Xingdong Yao
  • + 1 author

High-density planting is crucial for maximizing the genetic potential of soybean cultivars to achieve higher yields. However, increasing the planting density can lead to the risk of plant lodging. Therefore, the identification of gene loci associated...

  • Article
  • Open Access
2 Citations
3,984 Views
23 Pages

20 January 2022

In this study, we aimed to evaluate whether candidate genes for abiotic stresses in Fagus sylvatica L. are also candidate genes for herbaceous plants, with the purpose of better defining the abiotic stress response model of F. sylvatica. Therefore, a...

  • Article
  • Open Access
30 Citations
4,593 Views
17 Pages

Candidate Genes and Quantitative Trait Loci for Grain Yield and Seed Size in Durum Wheat

  • Giacomo Mangini,
  • Antonio Blanco,
  • Domenica Nigro,
  • Massimo Antonio Signorile and
  • Rosanna Simeone

5 February 2021

Grain yield (YLD) is affected by thousand kernel weight (TKW) which reflects the combination of grain length (GL), grain width (GW) and grain area (AREA). Grain weight is also influenced by heading time (HT) and plant height (PH). To detect candidate...

  • Review
  • Open Access
62 Citations
10,146 Views
23 Pages

Network Candidate Genes in Breeding for Drought Tolerant Crops

  • Christoph Tim Krannich,
  • Lisa Maletzki,
  • Christina Kurowsky and
  • Renate Horn

17 July 2015

Climate change leading to increased periods of low water availability as well as increasing demands for food in the coming years makes breeding for drought tolerant crops a high priority. Plants have developed diverse strategies and mechanisms to sur...

  • Article
  • Open Access
26 Citations
4,028 Views
18 Pages

Identification of Genomic Regions and Candidate Genes Associated with Body Weight and Body Conformation Traits in Karachai Goats

  • Ahmed A. Easa,
  • Marina Selionova,
  • Magomet Aibazov,
  • Tatiana Mamontova,
  • Alexander Sermyagin,
  • Anna Belous,
  • Alexandra Abdelmanova,
  • Tatiana Deniskova and
  • Natalia Zinovieva

30 September 2022

The objective of this study was to identify the SNPs and candidate genes related to body weight and seven body conformation traits at the age of 8 months in the Russian aboriginal Karachai goats (n = 269) by conducting genome-wide association studies...

  • Article
  • Open Access
2 Citations
1,820 Views
18 Pages

Comparative Analysis of Transcriptomes Reveals Pathways and Verifies Candidate Genes for Clubroot Resistance in Brassica oleracea

  • Fuquan Ce,
  • Jiaqin Mei,
  • Yu Zhao,
  • Qinfei Li,
  • Xuesong Ren,
  • Hongyuan Song,
  • Wei Qian and
  • Jun Si

24 August 2024

Clubroot, a soil-borne disease caused by Plasmodiophora brassicae, is one of the most destructive diseases of Brassica oleracea all over the world. However, the mechanism of clubroot resistance remains unclear. In this research, transcriptome sequenc...

  • Article
  • Open Access
4 Citations
3,037 Views
23 Pages

Genome-Wide Association Study Identified Candidate Genes for Alkalinity Tolerance in Rice

  • Lovepreet Singh,
  • Rajat Pruthi,
  • Sandeep Chapagain and
  • Prasanta K. Subudhi

3 June 2023

Alkalinity stress is a major hindrance to enhancing rice production globally due to its damaging effect on plants’ growth and development compared with salinity stress. However, understanding of the physiological and molecular mechanisms of alk...

  • Article
  • Open Access
3 Citations
2,078 Views
11 Pages

Genome-Wide Association Analysis Identifies Loci and Candidate Genes for 100-Kernel Weight in Maize

  • Meixia Wang,
  • Danyang Cheng,
  • Haojie Ren,
  • Haoyang Li,
  • Ruiyu Wang,
  • Chunlin Dong and
  • Jianzhong Chang

11 December 2024

Maize is an important food crop, and 100-kernel weight (HKW) is one of the three key components of yield. In this study, 200 maize inbred lines were used as the material, and HKW was evaluated over three consecutive years in two environments. A genom...

  • Review
  • Open Access
14 Citations
5,663 Views
18 Pages

Candidate Genes of Regulation of Skeletal Muscle Energy Metabolism in Athletes

  • Olga V. Balberova,
  • Evgeny V. Bykov,
  • German V. Medvedev,
  • Margarita A. Zhogina,
  • Kirill V. Petrov,
  • Marina M. Petrova,
  • Mustafa Al-Zamil,
  • Vera V. Trefilova,
  • Polina S. Goncharova and
  • Natalia A. Shnayder

23 October 2021

All biological processes associated with high sports performance, including energy metabolism, are influenced by genetics. DNA sequence variations in such genes, single nucleotide variants (SNVs), could confer genetic advantages that can be exploited...

  • Article
  • Open Access
1 Citations
1,157 Views
14 Pages

24 June 2025

Soybean [Glycine max (L.) Merr.] is a globally significant crop that provides essential meal protein and vegetable oil for human consumption. The protein content in soybean seeds is a critical factor that affects nutrition regarding human dietary nee...

  • Article
  • Open Access
58 Citations
4,988 Views
23 Pages

Natural Variation Uncovers Candidate Genes for Barley Spikelet Number and Grain Yield under Drought Stress

  • Samar G. Thabet,
  • Yasser S. Moursi,
  • Mohamed A. Karam,
  • Andreas Börner and
  • Ahmad M. Alqudah

11 May 2020

Drought stress can occur at any growth stage and can affect crop productivity, which can result in large yield losses all over the world. In this respect, understanding the genetic architecture of agronomic traits under drought stress is essential fo...

  • Review
  • Open Access
41 Citations
7,229 Views
35 Pages

At least 75% of the world’s grain production comes from the three most important cereal crops: rice (Oryza sativa), wheat (Triticum aestivum), and maize (Zea mays). However, abiotic stressors such as heavy metal toxicity, salinity, low temperat...

  • Article
  • Open Access
1,147 Views
24 Pages

Identification of Candidate Genes for Low Phosphorus Tolerance in Maize Seedling Stage Based on GWAS and Transcriptome

  • Xiaojia Hao,
  • Gonxin Lei,
  • Zhiming Zhong,
  • Zelong Zhuang,
  • Jianwen Bian,
  • Lei Zhang,
  • Wanling Ta,
  • Zhenping Ren and
  • Yunling Peng

11 September 2025

Phosphorus is an essential nutrient for maize growth and development, and its deficiency can significantly inhibit plant growth, leading to reduced yield and quality. To elucidate the genetic mechanisms underlying low phosphorus tolerance in maize, t...

  • Systematic Review
  • Open Access
1,001 Views
15 Pages

Candidate Genes of Gastrointestinal Nematode Resistance Traits in Sheep: A Systematic Review of GWASs and Gene Prioritization Analysis

  • Zhirou Zhang,
  • Gang Liu,
  • Deji Xu,
  • Yueqi Ma,
  • Xianlong Wang,
  • Yong Wang,
  • Lei Hou,
  • Jiaqing Hu,
  • Jianmin Wang and
  • Tianle Chao

28 September 2025

Background/Objectives: Gastrointestinal nematode infections represent a major constraint to sheep production globally, with widespread drug resistance requiring alternative control strategies. Methods: This systematic review combined genome-wide asso...

  • Article
  • Open Access
11 Citations
3,621 Views
18 Pages

22 February 2024

Compared to Chinese indigenous sheep, Western sheep have rapid growth rate, larger physique, and higher meat yield. These excellent Western sheep were introduced into China for crossbreeding to expedite the enhancement of production performance and m...

  • Article
  • Open Access
7 Citations
4,230 Views
24 Pages

Candidate Genes for the High-Altitude Adaptations of Two Mountain Pine Taxa

  • Julia Zaborowska,
  • Bartosz Łabiszak,
  • Annika Perry,
  • Stephen Cavers and
  • Witold Wachowiak

Mountain plants, challenged by vegetation time contractions and dynamic changes in environmental conditions, developed adaptations that help them to balance their growth, reproduction, survival, and regeneration. However, knowledge regarding the gene...

  • Article
  • Open Access
7 Citations
3,077 Views
15 Pages

Senescence is the last stage of plant development and is controlled by both internal and external factors. Premature senescence significantly affects the yield and quality of cotton. However, the genetic architecture underlying cotton senescence rema...

  • Article
  • Open Access
2 Citations
2,238 Views
15 Pages

Screening Candidate Genes at the Co Locus Conferring to the Columnar Growth Habit in Apple (Malus × Domestica Borkh.)

  • Jing Guo,
  • Yuan Zhao,
  • Yu Chu,
  • Yuru Li,
  • Yuqi Song,
  • Qi Pan,
  • Zhannan Qiu,
  • Boyang Yu and
  • Yuandi Zhu

24 April 2023

The columnar growth trait of apple (Malus × domestica Borkh.) is genetically controlled by the Columnar (Co) locus on 10 chromosomes, including several candidate genes. Except for MdCo31, other candidate genes at the Co locus are less elucidate...

  • Article
  • Open Access
39 Citations
5,719 Views
15 Pages

Integrating GWAS and Gene Expression Analysis Identifies Candidate Genes for Root Morphology Traits in Maize at the Seedling Stage

  • Houmiao Wang,
  • Jie Wei,
  • Pengcheng Li,
  • Yunyun Wang,
  • Zhenzhen Ge,
  • Jiayi Qian,
  • Yingying Fan,
  • Jinran Ni,
  • Yang Xu and
  • Zefeng Yang
  • + 1 author

2 October 2019

Root system plays an essential role in water and nutrient acquisition in plants. Understanding the genetic basis of root development will be beneficial for breeding new cultivars with efficient root system to enhance resource use efficiency in maize....

  • Article
  • Open Access
4 Citations
4,352 Views
17 Pages

The Identification by Exome Sequencing of Candidate Genes in BRCA-Negative Tunisian Patients at a High Risk of Hereditary Breast/Ovarian Cancer

  • Dorra BenAyed-Guerfali,
  • Chamseddine Kifagi,
  • Wala BenKridis-Rejeb,
  • Nihel Ammous-Boukhris,
  • Wajdi Ayedi,
  • Afef Khanfir,
  • Jamel Daoud and
  • Raja Mokdad-Gargouri

22 July 2022

(1) Background: Germline variants in BRCA1/BRCA2 genes explain about 20% of hereditary breast/ovarian cancer (HBOC) cases. In the present paper, we aim to identify genetic determinants in BRCA-negative families from the South of Tunisia. (2) Methods:...

  • Article
  • Open Access
16 Citations
4,644 Views
20 Pages

Comprehensive Transcriptome Profiling Uncovers Molecular Mechanisms and Potential Candidate Genes Associated with Heat Stress Response in Chickpea

  • Himabindu Kudapa,
  • Rutwik Barmukh,
  • Vanika Garg,
  • Annapurna Chitikineni,
  • Srinivasan Samineni,
  • Gaurav Agarwal and
  • Rajeev K. Varshney

10 January 2023

Chickpea (Cicer arietinum L.) production is highly susceptible to heat stress (day/night temperatures above 32/20 °C). Identifying the molecular mechanisms and potential candidate genes underlying heat stress response is important for increasing...

  • Article
  • Open Access
2,027 Views
19 Pages

Identified Candidate Genes of Semen Trait in Three Pig Breeds Through Weighted GWAS and Multi-Tissue Transcriptome Analysis

  • Xiaoke Zhang,
  • Zhiting Xu,
  • Qing Lin,
  • Yahui Gao,
  • Xiaotian Qiu,
  • Jiaqi Li and
  • Shuihua Xie

5 February 2025

High-quality semen is an essential factor for the success of artificial insemination, and revealing the genetic structure of pig semen traits helps improve semen quality. This study aimed to identify candidate genes associated with semen traits in th...

  • Review
  • Open Access
10 Citations
3,963 Views
18 Pages

Exploring and Identifying Candidate Genes and Genomic Regions Related to Economically Important Traits in Hanwoo Cattle

  • Masoumeh Naserkheil,
  • Zeinab Manzari,
  • Chang Gwon Dang,
  • Seung Soo Lee and
  • Mi Na Park

4 December 2022

The purpose of the current review was to explore and summarize different studies concerning the detection and characterization of candidate genes and genomic regions associated with economically important traits in Hanwoo beef cattle. Hanwoo cattle,...

  • Article
  • Open Access
1 Citations
3,128 Views
11 Pages

Sequence Analysis of Six Candidate Genes in Miniature Schnauzers with Primary Hypertriglyceridemia

  • Nicole M. Tate,
  • Michaela Underwood,
  • Alison Thomas-Hollands,
  • Katie M. Minor,
  • Jonah N. Cullen,
  • Steven G. Friedenberg,
  • James R. Mickelson,
  • Panagiotis G. Xenoulis,
  • Joerg M. Steiner and
  • Eva Furrow

31 January 2024

Miniature Schnauzers are predisposed to primary hypertriglyceridemia (HTG). In this study, we performed whole genome sequencing (WGS) of eight Miniature Schnauzers with primary HTG and screened for risk variants in six HTG candidate genes: LPL, APOC2...

  • Article
  • Open Access
6 Citations
2,485 Views
13 Pages

19 February 2024

Tibetan pigs are indigenous to the Qinghai–Tibet Plateau and have been the subject of extensive genomic research primarily focused on their adaptation to high altitudes. However, genetic modifications associated with their response to low-altit...

  • Review
  • Open Access
15 Citations
3,463 Views
21 Pages

Hotspot Regions of Quantitative Trait Loci and Candidate Genes for Ear-Related Traits in Maize: A Literature Review

  • Xingjie Zhang,
  • Jiachen Sun,
  • Yudong Zhang,
  • Jinfeng Li,
  • Meichen Liu,
  • Linzhuo Li,
  • Shaoxiong Li,
  • Tingzhao Wang,
  • Ranjan Kumar Shaw and
  • Fuyan Jiang
  • + 1 author

21 December 2023

In this study, hotspot regions, QTL clusters, and candidate genes for eight ear-related traits of maize (ear length, ear diameter, kernel row number, kernel number per row, kernel length, kernel width, kernel thickness, and 100-kernel weight) were su...

  • Article
  • Open Access
9 Citations
8,245 Views
12 Pages

A Public Platform for the Verification of the Phenotypic Effect of Candidate Genes for Resistance to Aflatoxin Accumulation and Aspergillus flavus Infection in Maize

  • Marilyn L. Warburton,
  • William Paul Williams,
  • Leigh Hawkins,
  • Susan Bridges,
  • Cathy Gresham,
  • Jonathan Harper,
  • Seval Ozkan,
  • J. Erik Mylroie and
  • Xueyan Shan

24 June 2011

A public candidate gene testing pipeline for resistance to aflatoxin accumulation or Aspergillus flavus infection in maize is presented here. The pipeline consists of steps for identifying, testing, and verifying the association of selected maize gen...

  • Article
  • Open Access
23 Citations
3,751 Views
17 Pages

Identification of Key Candidate Genes in Runs of Homozygosity of the Genome of Two Chicken Breeds, Associated with Cold Adaptation

  • Elena S. Fedorova,
  • Natalia V. Dementieva,
  • Yuri S. Shcherbakov and
  • Olga I. Stanishevskaya

1 April 2022

It is well known that the chicken gene pools have high adaptive abilities, including adaptation to cold environments. This research aimed to study the genomic distribution of runs of homozygosity (ROH) in a population of Russian White (RW) chickens a...

  • Article
  • Open Access
4 Citations
2,761 Views
24 Pages

Integrated Transcriptome and GWAS Analysis to Identify Candidate Genes for Ustilago maydis Resistance in Maize

  • Bingyu Yin,
  • Linjie Xu,
  • Jianping Li,
  • Yunxiao Zheng,
  • Weibin Song,
  • Peng Hou,
  • Liying Zhu,
  • Xiaoyan Jia,
  • Yongfeng Zhao and
  • Wei Song
  • + 1 author

Maize Ustilago maydis is a disease that severely affects maize yield and quality. In this paper, we employed transcriptome sequencing and GWAS analysis to identify candidate genes and reveal disease-resistant germplasm resources, thereby laying the f...

  • Article
  • Open Access
1,674 Views
13 Pages

Identification of Quantitative Trait Loci and Candidate Genes Controlling Seed Dormancy in Eggplant (Solanum melongena L.)

  • Jiaqi Ai,
  • Wuhong Wang,
  • Tianhua Hu,
  • Haijiao Hu,
  • Jinglei Wang,
  • Yaqin Yan,
  • Hongtao Pang,
  • Yong Wang,
  • Chonglai Bao and
  • Qingzhen Wei

26 March 2024

Seed dormancy is a life adaptation trait exhibited by plants in response to environmental changes during their growth and development. The dormancy of commercial seeds is the key factor affecting seed quality. Eggplant seed dormancy is controlled by...

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