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1,241 Results Found

  • Review
  • Open Access
68 Citations
11,273 Views
19 Pages

Characteristics of the Gut Bacterial Composition in People of Different Nationalities and Religions

  • Mikhail Syromyatnikov,
  • Ekaterina Nesterova,
  • Maria Gladkikh,
  • Yuliya Smirnova,
  • Mariya Gryaznova and
  • Vasily Popov

High-throughput sequencing has made it possible to extensively study the human gut microbiota. The links between the human gut microbiome and ethnicity, religion, and race remain rather poorly understood. In this review, data on the relationship betw...

  • Article
  • Open Access
63 Citations
7,746 Views
15 Pages

Mouse Vendor Influence on the Bacterial and Viral Gut Composition Exceeds the Effect of Diet

  • Torben Sølbeck Rasmussen,
  • Liv de Vries,
  • Witold Kot,
  • Lars Hestbjerg Hansen,
  • Josué L. Castro-Mejía,
  • Finn Kvist Vogensen,
  • Axel Kornerup Hansen and
  • Dennis Sandris Nielsen

13 May 2019

Often physiological studies using mice from one vendor show different outcome when being reproduced using mice from another vendor. These divergent phenotypes between similar mouse strains from different vendors have been assigned to differences in t...

  • Systematic Review
  • Open Access
2 Citations
2,228 Views
29 Pages

The Bacterial Composition of the Gut Microbiota of Mexicans with Overweight and Obesity: A Systematic Review

  • María Alejandra Samudio-Cruz,
  • Alexandra Luna-Angulo,
  • Elizabeth Cabrera-Ruiz,
  • Carlos Landa-Solis,
  • Edgar Rangel-López,
  • Paul Carrillo-Mora,
  • Juan Ríos-Martínez,
  • Rafael Toledo-Pérez,
  • Rogelio Paniagua-Pérez and
  • Laura Sánchez-Chapul
  • + 3 authors

The role of the gut microbiota in obesity has been extensively studied worldwide, but research in Mexican populations is still limited. This is particularly important given the high obesity rates in Mexico, despite a traditional diet rich in diverse,...

  • Article
  • Open Access
1 Citations
3,660 Views
15 Pages

The Relationship Between Fiber Intake and Gut Bacterial Diversity and Composition During the Third Trimester of Pregnancy

  • Lindsay T. Schwartz,
  • Jillian G. Ladouceur,
  • Madeleine M. Russell,
  • Shiyi Y. L. Xie,
  • Sihan Bu,
  • Jean M. Kerver and
  • Sarah S. Comstock

22 February 2025

Background/Objectives: High fiber (34–36 g/day) diets are recommended during pregnancy due to inverse associations with constipation and adverse pregnancy health outcomes, including pre-eclampsia and gestational diabetes. However, the mechanism...

  • Article
  • Open Access
267 Views
14 Pages

Prevotella-Based Bacterial Mixture Influences Gut Microbiota Composition in Weaned Piglets

  • Jitka Matiasovicova,
  • Daniela Karasova,
  • Alena Sebkova,
  • Vladimir Babak and
  • Ivan Rychlik

Based on previous knowledge on changes in the gut microbiota of weaned piglets, a mixture of five different Prevotella species, Anaerovibrio lipolyticus, and Mitsuokella multacida (a Prevotella mixture) was tested as potentially novel type of probiot...

  • Communication
  • Open Access
7 Citations
2,314 Views
8 Pages

Exposure to Oxy-Tetracycline Changes Gut Bacterial Community Composition in Rainbow Trout: A Preliminary Study

  • Aritra Roy Choudhury,
  • Ji-Young Park,
  • Do Young Kim,
  • Jeongyun Choi,
  • Satabdi Acharya and
  • Jung-Ho Park

29 November 2021

The extensive use of antibiotics is evident in most of the livestock and aquaculture management for inhibiting pathogen infection. Korean aquaculture depends on the usage of oxy-tetracycline for growing rainbow trout. Hence, this study was conducted...

  • Article
  • Open Access
3 Citations
1,660 Views
13 Pages

Osmia excavata is an excellent pollinator in nature and plays a vital role in the conservation of agro-ecosystems and food security. Given the important role of the gut bacterial community in host health and regulation of host growth and development,...

  • Article
  • Open Access
1 Citations
3,857 Views
18 Pages

Altered Gut Microbiome Composition in Dogs with Hyperadrenocorticism: Key Bacterial Genera Analysis

  • Hee-Jun Kang,
  • Sang-Won Kim,
  • Seon-Myung Kim,
  • Tae-Min La,
  • Jae-Eun Hyun,
  • Sang-Won Lee and
  • Jung-Hyun Kim

7 October 2024

Hyperadrenocorticism (HAC) is a common endocrine disorder in dogs, which is associated with diverse metabolic abnormalities. We hypothesized that elevated cortisol levels in dogs with HAC disrupt the gut microbiome (GM), and this disruption persists...

  • Article
  • Open Access
887 Views
15 Pages

Gut microbiota “enterotypes” are strongly associated with diet and host health. For grazing animals, plant species richness and nutrient content of vegetation may alter the food supply and diet composition of animals. Understanding this r...

  • Article
  • Open Access
10 Citations
2,734 Views
14 Pages

With the continuous rise of the sea cucumber aquaculture industry in China, the tropical sea cucumber aquaculture industry is also improving. However, research on the gut microorganisms of tropical sea cucumbers in captivity is scarce. In this study,...

  • Article
  • Open Access
4 Citations
3,245 Views
15 Pages

Comparison of Bacterial Community Composition in Gut of Chinese Mitten Crabs from Three Distinct Rivers in Korea

  • Hyung-Eun An,
  • Adeel Malik,
  • Jeongho Lee,
  • Min-Ho Mun,
  • Kang Hyun Lee,
  • Hah Young Yoo and
  • Chang-Bae Kim

20 April 2024

The Chinese mitten crab (CMC) also known as Eriocheir sinensis has great significance in the aquaculture industry. The bacterial communities inhabiting the CMC’s gut may differ depending on the host habitat and can aid in their normal biologica...

  • Article
  • Open Access
8 Citations
5,709 Views
25 Pages

Changes in Bacterial Gut Composition in Parkinson’s Disease and Their Metabolic Contribution to Disease Development: A Gut Community Reconstruction Approach

  • Johanna Forero-Rodríguez,
  • Johannes Zimmermann,
  • Jan Taubenheim,
  • Natalia Arias-Rodríguez,
  • Juan David Caicedo-Narvaez,
  • Lena Best,
  • Cindy V. Mendieta,
  • Julieth López-Castiblanco,
  • Laura Alejandra Gómez-Muñoz and
  • Andrés Pinzón
  • + 4 authors

Parkinson’s disease (PD) is a chronic and progressive neurodegenerative disease with the major symptoms comprising loss of movement coordination (motor dysfunction) and non-motor dysfunction, including gastrointestinal symptoms. Alterations in...

  • Article
  • Open Access
5 Citations
4,880 Views
41 Pages

Elucidating the Relations between Gut Bacterial Composition and the Plasma and Fecal Metabolomes of Antibiotic Treated Wistar Rats

  • Aishwarya Murali,
  • Varun Giri,
  • Hunter James Cameron,
  • Christina Behr,
  • Saskia Sperber,
  • Hennicke Kamp,
  • Tilmann Walk and
  • Bennard van Ravenzwaay

The gut microbiome is vital to the health and development of an organism, specifically in determining the host response to a chemical (drug) administration. To understand this, we investigated the effects of six antibiotic (AB) treatments (Streptomyc...

  • Article
  • Open Access
4 Citations
2,063 Views
17 Pages

Gut Bacterial Composition and Nutritional Implications in Mexican and Spanish Individuals with Inflammatory Bowel Disease Compared to Healthy Controls

  • Ricardo García-Gamboa,
  • Osiris Díaz-Torres,
  • Misael Sebastián Gradilla-Hernández,
  • Vicente Pérez-Brocal,
  • Andrés Moya and
  • Marisela González-Avila

5 November 2024

The intestinal microbiota plays a key role in the pathogenesis of inflammatory bowel disease (IBD), with its composition varying based on geographic location and dietary factors. This study was performed to examine and compare the bacterial compositi...

  • Article
  • Open Access
3 Citations
2,441 Views
12 Pages

Siphonosoma australe, Phascolosoma arcuatum, and Sipunculus nudus are three important sipunculan species in tropical intertidal zones. In this study, the particle size, organic matter content, and bacterial community composition in the gut contents o...

  • Review
  • Open Access
26 Citations
6,267 Views
13 Pages

16 October 2022

Although massive progress in discovering allergic rhinitis (AR) aetiology has been made in recent years, its prevalence is still rising and it significantly impacts patients’ lives. That is why further and non-conventional research elucidating...

  • Article
  • Open Access
10 Citations
3,350 Views
14 Pages

19 February 2021

The gut bacterial communities of copepods can affect metabolic processes, and consequently, their activity can be related to the release of organic substances to the environment. Hence, they are important for organic matter cycling in marine coast fo...

  • Article
  • Open Access
5 Citations
2,768 Views
18 Pages

Dysbiosis: An Indicator of COVID-19 Severity in Critically Ill Patients

  • Silvia Cuenca,
  • Zaida Soler,
  • Gerard Serrano-Gómez,
  • Zixuan Xie,
  • Jordi Barquinero,
  • Joaquim Roca,
  • Jose-Maria Sirvent and
  • Chaysavanh Manichanh

13 December 2022

Here, we examined the dynamics of the gut and respiratory microbiomes in severe COVID-19 patients in need of mechanical ventilation in the intensive care unit (ICU). We recruited 85 critically ill patients (53 with COVID-19 and 32 without COVID-19) a...

  • Communication
  • Open Access
36 Citations
9,307 Views
9 Pages

Comparison of the Gut Microbiome between Atopic and Healthy Dogs—Preliminary Data

  • Ana Rostaher,
  • Yasser Morsy,
  • Claude Favrot,
  • Stefan Unterer,
  • Manuela Schnyder,
  • Michael Scharl and
  • Nina Maria Fischer

12 September 2022

Human studies show that in addition to skin barrier and immune cell dysfunction, both the cutaneous and the gut microbiota can influence the pathogenesis of atopic diseases. There is currently no data on the gut-skin axis in allergic canines. Therefo...

  • Article
  • Open Access
23 Citations
5,266 Views
14 Pages

This study presents the potential effects of the genetic background and use of probiotics on the gut bacterial composition of Pacific whiteleg shrimp (Litopenaeus vannamei) grown in an indoor aquaculture facility. The strains investigated were Shrimp...

  • Article
  • Open Access
9 Citations
3,680 Views
15 Pages

Plant-Based, Antioxidant-Rich Snacks Elevate Plasma Antioxidant Ability and Alter Gut Bacterial Composition in Older Adults

  • Jing-Yao Zhang,
  • Hui-Chen Lo,
  • Feili Lo Yang,
  • Yi-Fang Liu,
  • Wen-Mein Wu and
  • Chi-Chun Chou

29 October 2021

Plant-rich diets alleviate oxidative stress and gut dysbiosis and are negatively linked to age-associated chronic disorders. This study examined the effects of consuming plant-based, antioxidant-rich smoothies and sesame seed snacks (PBASS) on antiox...

  • Communication
  • Open Access
1 Citations
1,640 Views
10 Pages

Intestinal Emphysema and Gut Bacterial Microbiota Composition

  • Jasmine Hattab,
  • Alfonso Rosamilia,
  • Chiara Guarnieri,
  • Domenico Sciota,
  • Giuseppe Marruchella and
  • Pietro Giorgio Tiscar

Pneumatosis cystoides intestinalis, or intestinal emphysema, is a condition characterized by the presence of multiple cystic structures within the gut wall and on the serosal surface of the intestine. Intestinal emphysema represents an accidental fin...

  • Article
  • Open Access
28 Citations
5,104 Views
22 Pages

Characterization of the Fecal and Mucosa-Associated Microbiota in Dogs with Chronic Inflammatory Enteropathy

  • David Díaz-Regañón,
  • Mercedes García-Sancho,
  • Alejandra Villaescusa,
  • Ángel Sainz,
  • Beatriz Agulla,
  • Mariana Reyes-Prieto,
  • Antonio Rodríguez-Bertos and
  • Fernando Rodríguez-Franco

17 January 2023

Canine chronic inflammatory enteropathy implicates multifactorial pathogenesis where immunological dysregulation and gut microbiota changes have a central role. Most sequencing-based taxonomic studies have been focused on the fecal microbiota. Howeve...

  • Article
  • Open Access
14 Citations
3,713 Views
10 Pages

Effect of Microgravity on the Gut Microbiota Bacterial Composition in a Hindlimb Unloading Model

  • Ruqaiyyah Siddiqui,
  • Rizwan Qaisar,
  • Naveed Ahmed Khan,
  • Ahmad M. Alharbi,
  • Hasan Alfahemi and
  • Adel Elmoselhi

12 November 2022

We utilised a ground-based microgravity hindlimb unloading (HU) mouse model to elucidate the gut microbiota bacterial changes in mice under a simulated microgravity environment. Four-month-old, male C57/Bl6 mice were randomly divided into ground-base...

  • Article
  • Open Access
25 Citations
3,851 Views
16 Pages

Bacterial Compositional Shifts of Gut Microbiomes in Patients with Rheumatoid Arthritis in Association with Disease Activity

  • Nagwan G. El Menofy,
  • Mohammed Ramadan,
  • Eman R. Abdelbary,
  • Hatem G. Ibrahim,
  • Adel I. Azzam,
  • Mohamed M. Ghit,
  • Ahmed S. Ezz,
  • Yasser A. Gazar and
  • Mohammed Salah

Background: Rheumatoid arthritis (RA) is a chronic inflammatory disabling autoimmune disorder. Little is known regarding the association between the gut microbiome and etiopathogenesis of RA. We aimed to dissect the differences in gut microbiomes ass...

  • Article
  • Open Access
13 Citations
3,593 Views
17 Pages

Gut Micro- and Mycobiota in Preeclampsia: Bacterial Composition Differences Suggest Role in Pathophysiology

  • Sofie Meijer,
  • Elena Pasquinelli,
  • Sonia Renzi,
  • Shahram Lavasani,
  • Mehrnaz Nouri,
  • Lena Erlandsson,
  • Duccio Cavalieri and
  • Stefan R. Hansson

10 February 2023

Preeclampsia is a severe pregnancy-related inflammatory disease without an effective treatment. The pathophysiology remains partly unknown. However, an increased inflammatory response and oxidative stress are part of the maternal systemic reaction. R...

  • Article
  • Open Access
29 Citations
4,716 Views
13 Pages

Earthworms heavily modify the soil microbiome as it passes throughout their guts. However, there are no detailed studies describing changes in the composition, structure and diversity of soil microbiomes during gut transit and once they are released...

  • Communication
  • Open Access
14 Citations
3,099 Views
8 Pages

1 June 2023

The fish gut microbiota plays an important role in overall health. However, few reports have described the changes in the composition of gut microbiota following infection with pathogenic bacteria in olive flounder (Paralichthys olivaceus). Here, we...

  • Article
  • Open Access
30 Citations
8,014 Views
21 Pages

Clostridium butyricum MIYAIRI 588 Modifies Bacterial Composition under Antibiotic-Induced Dysbiosis for the Activation of Interactions via Lipid Metabolism between the Gut Microbiome and the Host

  • Tadashi Ariyoshi,
  • Mao Hagihara,
  • Susumu Tomono,
  • Shuhei Eguchi,
  • Ayaka Minemura,
  • Daiki Miura,
  • Kentaro Oka,
  • Motomichi Takahashi,
  • Yuka Yamagishi and
  • Hiroshige Mikamo

The gut microbiome is closely related to gut metabolic functions, and the gut microbiome and host metabolic functions affect each other. Clostridium butyricum MIYAIRI 588 (CBM 588) upregulates protectin D1 production in host colon tissue following G...

  • Article
  • Open Access
6 Citations
2,598 Views
19 Pages

Physiological Conditions Leading to Maternal Subclinical Ketosis in Holstein Dairy Cows Can Impair the Offspring’s Postnatal Growth and Gut Microbiome Development

  • Jessica Halfen,
  • Nathaly Ana Carpinelli,
  • Sergio Lasso-Ramirez,
  • Tainara Cristina Michelotti,
  • Emily C. Fowler,
  • Benoit St-Pierre,
  • Erminio Trevisi and
  • Johan S. Osorio

Maternal metabolic disruptions, such as ketosis, can have adverse effects on fetal development and influence postnatal factors. Twelve Holstein calves were randomly enrolled in this study at birth and monitored until 8 weeks of age. The study was con...

  • Article
  • Open Access
446 Views
13 Pages

Comparison of Gut Bacterial Communities in the Freshwater Mussel Sinanodonta woodiana at Different Life Stages

  • Mengying Gu,
  • Huan Wang,
  • Meiyi Wang,
  • Ibrahim Bah,
  • Tao Jiang,
  • Junren Xue,
  • Xinyu Ding and
  • Xiubao Chen

25 November 2025

Freshwater mussels hold significant ecological and economic value. Gut bacterial communities can regulate the growth and immunity of freshwater mussels. However, the dynamics of gut bacterial communities in freshwater mussels at different life stages...

  • Article
  • Open Access
5 Citations
2,621 Views
13 Pages

29 November 2022

We investigated whether the gut bacterial community of Chlaenius pallipes could represent the health conditions of individuals or populations based on where these beetles inhabit. Considering the ecological traits of the species, the gut bacterial co...

  • Article
  • Open Access
1,478 Views
17 Pages

23 August 2024

Immunoglobulin A (IgA) is a major gut antibody that coats commensal gut bacteria and contributes to shaping a stable gut bacterial composition. Although previous studies have shown that cyclic oligosaccharides, including cyclic nigerosyl-1,6-nigerose...

  • Article
  • Open Access
21 Citations
6,913 Views
13 Pages

21 October 2020

Although stag beetles are popular saprophytic insects, there are few studies about their gut bacterial community. This study focused on the gut bacterial community structure of the rainbow stag beetle (i.e., Phalacrognathus muelleri) in its larvae (t...

  • Article
  • Open Access
8 Citations
2,971 Views
13 Pages

Gut Bacterial Communities Vary across Habitats and Their Diversity Increases with Increasing Glucocorticoids in Toad Tadpoles

  • Caitlin R. Gabor,
  • Melissa Villatoro-Castañeda,
  • Camila Carlos-Shanley,
  • Nikolett Ujhegyi and
  • Veronika Bókony

23 December 2022

The gut microbiome is important for host health and can be influenced by environmental and hormonal changes. We studied the interactions between anthropogenic land use, glucocorticoid hormones, and gut bacterial communities in common toads (Bufo bufo...

  • Article
  • Open Access
704 Views
15 Pages

The increased production of sewage sludge is a major environmental concern as the sludge contains hazardous components, particularly human bacterial pathogens (HBPs). Transit of sewage sludge through the earthworm gut reduce or even eliminate HBPs an...

  • Review
  • Open Access
12 Citations
5,607 Views
29 Pages

23 February 2023

Bacterial co-culture studies using synthetic gut microbiomes have reported novel research designs to understand the underlying role of bacterial interaction in the metabolism of dietary resources and community assembly of complex microflora. Since la...

  • Article
  • Open Access
336 Views
15 Pages

9 January 2026

Analyzing the composition and structure of the gut bacterial community in Antheraea pernyi is essential for improving its economic traits, as well as for understanding gut bacteria–host interactions in lepidopteran insects. This study utilized...

  • Article
  • Open Access
5 Citations
2,932 Views
14 Pages

Spiders are a key predator of insects across ecosystems and possess great potential as pest control agents. Unfortunately, it is difficult to artificially cultivate multiple generations of most spider species. Since gut bacterial flora has been shown...

  • Article
  • Open Access
3 Citations
2,927 Views
23 Pages

Bacteria and phages are two of the most abundant biological entities in the gut microbiome, and diet and host phylogeny are two of the most critical factors influencing the gut microbiome. A stable gut bacterial community plays a pivotal role in the...

  • Article
  • Open Access
16 Citations
6,072 Views
16 Pages

Dominance of Fructose-Associated Fructobacillus in the Gut Microbiome of Bumblebees (Bombus terrestris) Inhabiting Natural Forest Meadows

  • Ronalds Krams,
  • Dita Gudra,
  • Sergejs Popovs,
  • Jonathan Willow,
  • Tatjana Krama,
  • Maris Munkevics,
  • Kaspars Megnis,
  • Priit Jõers,
  • Davids Fridmanis and
  • Indrikis A. Krams
  • + 1 author

15 January 2022

Bumblebees are key pollinators in agricultural landscapes. However, little is known about how gut microbial communities respond to anthropogenic changes. We used commercially produced colonies of buff-tailed bumblebees (Bombus terrestris) placed in t...

  • Article
  • Open Access
1 Citations
1,891 Views
13 Pages

5 June 2024

The host’s physiological well-being is intricately associated with the gut microbiota. However, previous studies regarding the intestinal microbiota have focused on domesticated or captive birds. This study used high-throughput sequencing techn...

  • Feature Paper
  • Review
  • Open Access
21 Citations
5,697 Views
17 Pages

Gut bacterial communities assist host animals with numerous functions such as food digestion, nutritional provision, or immunity. Some social mammals and insects are unique in that their gut microbial communities are stable among individuals. In this...

  • Review
  • Open Access
425 Citations
45,847 Views
15 Pages

15 August 2021

Diet and dietary components have profound effects on the composition of the gut microbiota and are among the most important contributors to the alteration in bacterial flora. This review examines the effects the “Western”, “plant-based”, “high-fat”,...

  • Article
  • Open Access
1 Citations
4,102 Views
13 Pages

8 April 2019

It is commonly recognized that immunodeficiency modifies the gut microbiota in mammals. However, little information on the gut microbiota is available for athymic nude mice; one of the most popular animals for modeling immunodeficiency and tumors. In...

  • Article
  • Open Access
21 Citations
3,513 Views
13 Pages

Effect of Environmental Exposures on the Gut Microbiota from Early Infancy to Two Years of Age

  • Kameron Y. Sugino,
  • Tengfei Ma,
  • Nigel Paneth and
  • Sarah S. Comstock

The gut microbiota undergoes rapid changes during infancy in response to early-life exposures. We have investigated how the infant gut bacterial community matures over time and how exposures such as human milk and antibiotic treatment alter gut micro...

  • Article
  • Open Access
5 Citations
4,204 Views
14 Pages

17 February 2021

Ponerine ants are generalist predators feeding on a variety of small arthropods, annelids, and isopods; however, knowledge of their bacterial communities is rather limited. This study investigated the bacterial composition and diversity in the digest...

  • Article
  • Open Access
5 Citations
2,957 Views
17 Pages

Brain Tumors and Beyond: Multi-Compartment Microbiome and Mycobiome Analysis

  • László Sipos,
  • Péter Banczerowski,
  • János Juhász,
  • Imre Fedorcsák,
  • György Berényi,
  • Nóra Makra,
  • Zsuzsanna A. Dunai,
  • Dóra Szabó and
  • Loránd Erőss

Brain tumors are frequently diagnosed diseases in which etiology and progression largely depend on mutations and genetic factors. Additionally, recent reports document that the microbiome may influence tumor growth, tumor microenvironment, and respon...

  • Article
  • Open Access
14 Citations
4,923 Views
15 Pages

Gut Microbiota in Patients with Non-Alcoholic Fatty Liver Disease without Type 2 Diabetes: Stratified by Body Mass Index

  • Natthaya Chuaypen,
  • Aisawan Asumpinawong,
  • Pattarose Sawangsri,
  • Jakkrit Khamjerm,
  • Nutta Iadsee,
  • Thananya Jinato,
  • Sawannee Sutheeworapong,
  • Suthep Udomsawaengsup and
  • Pisit Tangkijvanich

2 February 2024

The relationship between gut dysbiosis and body mass index (BMI) in non-diabetic patients with non-alcoholic fatty liver disease (NAFLD) is not adequately characterized. This study aimed to assess gut microbiota’s signature in non-diabetic indi...

  • Article
  • Open Access
12 Citations
3,395 Views
17 Pages

Impact of Zinc Oxide Nanoparticles on the Composition of Gut Microbiota in Healthy and Autism Spectrum Disorder Children

  • Rongrong Yu,
  • Temoor Ahmed,
  • Hubiao Jiang,
  • Guoling Zhou,
  • Muchen Zhang,
  • Luqiong Lv and
  • Bin Li

23 September 2021

Autism spectrum disorder (ASD) seriously affects children’s health, while the gut microbiome has been widely hypothesized to be involved in the regulation of ASD behavior. This study investigated and compared the number, diversity, and population str...

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