Information in phylogenetic systematic analysis has been conceptualized, defined, quantified, and used differently by different authors. In this paper, we start with the Shannon Uncertainty Measure information measure I, applying it to cladograms con...
The formation of mature mRNA requires cutting introns and splicing exons. The occurrence of splicing involves the participation of the spliceosome. Common spliceosomes mainly include five snRNPs: U1, U2, U4/U6, and U5. SF3a2, an essential component o...
Insect wing base sclerites are crucial to wing function and evolution, yet their diversity beyond order-level comparisons remains poorly understood. We examine variation in wing base sclerites across Vespidae, focusing on the axillary sclerites (1Ax,...
Using cladistic phylogenies (cladograms) to evaluate stratigraphy (taxon distributions and correlations) necessitates various assumptions that include all of the assumptions built into the cladogram, assuming the cladogram is “correct” an...
Plumolepilius Barrios-Izás & Anderson, 2016 is a leaf litter weevil genus that inhabits montane broadleaf forests from southern Mexico to northern Panama. The genus consists of 27 species, 22 distributed in the Chiapas Highlands province (Mexican...
Past efforts to identify and characterize minimally monophyletic groups (microgenera) by deconstructing larger bryophyte genera successfully determined 10 microgenera comprising the moss family Streptotrichaceae. Thirty other microgenera have also be...
Cystoseira sensu lato (sl) are three genera widely recognized as bioindicators for their restricted habitat in a sub-coastal zone with low tolerance to pollution. Their ecological, morphological and taxonomic features are still little known due to th...
This study identified the genetic diversity of amylase-producing lactic acid bacteria from brown rice (Oryza nivara) Wakawondu cultivar based on the 16S rRNA gene. The ten lactic acid bacteria strains were isolated from the fermented Wakawondu rice w...
A new genus and species, Latidorsum carinbifarium Wang, Tang & Yao gen. et sp. nov., is assigned to Phatnomatini (Tinginae), which is described from the mid-Cretaceous Burmese amber. A parsimonious analysis based on 50 morphological characters wi...
Molecular phylogenetics brought radical changes to our understanding of nematode evolution, resulting in substantial modifications to nematode classification implemented by De Ley and Blaxter and widely accepted now. Numerous phylogenetic studies wer...
Papillomaviruses (PVs) are considered highly species-specific with cospeciation as the main driving force in their evolution. However, a recent increase in the available PV genome sequences has revealed inconsistencies in virus–host phylogenies, whic...
The ability to detect population structure and determine the extent of genetic variation among populations is critical for understanding genetic background and effective fishery management. Fifty-eight individuals of S. sinica were resequenced with a...
Mexico harbors ~45% of world’s cacti species richness. Their biogeography and phylogenomics were integrated to elucidate the evolutionary history of the genera Coryphantha, Escobaria, Mammillaria, Mammilloydia, Neolloydia, Ortegocactus, and Pel...
Two novel strains of Rummeliibacillus sp. and Microbacterium sp. were identified from the intestine of olive flounder (Paralichthys olivaceus) and characterized in vitro as potential probiotics. Feeds without probiotic and with a 50:50 mixture of the...
The present research aimed to determine the main differences in meat and carcass quality traits among turkey genotypes worldwide and describe the clustering patterns through the use of a discriminant canonical analysis (DCA). To achieve this goal, a...
Responding to the ongoing and severe public health threat of viruses of the family Flaviviridae, including dengue, hepatitis C, West Nile, yellow fever, and Zika, demands a greater understanding of how these viruses emerge and spread. Updated phyloge...
Lignin is an important biological polymer in plants that is necessary for plant secondary cell wall ontogenesis. The laccase (LAC) gene family catalyzes lignification and has been suggested to play a vital role in the plant kingdom. In this study, we...
Sapium sebiferum (L.) Roxb. is an economically important tree in eastern Asia, and it exhibits many traits associated with good forestation species in coastal land. However, scarce research has been conducted to elucidate the effects of rhizosphere b...
A comprehensive understanding of rice straw (RS) and biochar (BC) addition affecting soil quality, enzyme activities, bacterial community structure and grain yield is crucial. The objective of this study was to examine the dynamics of the soil microb...
Introduction: Metabolomics-based phylogenetic profiling of prostate cancer (PCa) patients before and after stereotactic body radiation therapy (SBRT) can provide insight into the way in which treatment outcomes relate to the underlying physiology and...
To study shifts in the intestinal microbiota during estrus synchronization in ruminants, we characterized the intestinal microbiota in grazing Simmental cows and the possible mechanism that mediates this shift. Fourteen postpartum Simmental beef cows...