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17 Results Found

  • Article
  • Open Access
2,070 Views
20 Pages

3 April 2025

This paper presents an interactive online e-portal development and application using Shiny/R version 4.4.0 programming for personalised varifocal lens surface design and manufacturing in an agile and responsive manner. Varifocal lenses are specialise...

(This article belongs to the Section Advanced Manufacturing)
  • Article
  • Open Access
25 Views
20 Pages

4 November 2026

Managers of closed or semi-closed animal breeding programs must balance production targets with the preservation of genetic diversity, yet they often lack training in population genetics and access to integrated, user-friendly tools. RAPPORT (Related...

(This article belongs to the Section Animal System and Management)
  • Review
  • Open Access
195 Citations
25,578 Views
25 Pages

The R Language: An Engine for Bioinformatics and Data Science

  • Federico M. Giorgi,
  • Carmine Ceraolo and
  • Daniele Mercatelli

27 April 2022

The R programming language is approaching its 30th birthday, and in the last three decades it has achieved a prominent role in statistics, bioinformatics, and data science in general. It currently ranks among the top 10 most popular languages worldwi...

(This article belongs to the Section Genomics and Proteomics)
  • Article
  • Open Access
2 Citations
2,015 Views
16 Pages

16 January 2025

In modern freeform surfaced optics manufacturing, ultraprecision machining through single-point diamond turning (SPDT) plays a crucial role due to its ability to meet the high accuracy demands of optical design and stringent surface quality requireme...

(This article belongs to the Special Issue Innovative Manufacturing Engineering 2024—Processes, Machines, Tooling and Systems Integration)
  • Protocol
  • Open Access
7 Citations
3,552 Views
9 Pages

ρ-MtreeRing: A Graphical User Interface for X-ray Microdensity Analysis

  • Miguel García-Hidalgo,
  • Ángel M. García-Pedrero,
  • Cristina Caetano-Sánchez,
  • Marcos Gómez-España and ,
  • Mario Lillo-Saavedra and
  • José Miguel Olano
  • + 1 author+ 0 author

15 October 2021

Wood microdensitometry provides an integrated measurement of inter and intra-annual changes in wood anatomy and lignification. Although it can be acquired through a wide array of techniques, X-ray-based techniques are still the standard. Conversion o...

(This article belongs to the Section Wood Science and Forest Products)
  • Article
  • Open Access
17 Citations
5,238 Views
8 Pages

WebSpecmine: A Website for Metabolomics Data Analysis and Mining

  • Sara Cardoso,
  • Telma Afonso,
  • Marcelo Maraschin and
  • Miguel Rocha

19 October 2019

Metabolomics data analysis is an important task in biomedical research. The available tools do not provide a wide variety of methods and data types, nor ways to store and share data and results generated. Thus, we have developed WebSpecmine to overco...

(This article belongs to the Section Advances in Metabolomics)
  • Article
  • Open Access
11 Citations
3,378 Views
12 Pages

Development of MetaXplore: An Interactive Tool for Targeted Metagenomic Analysis

  • Naima Bel Mokhtar,
  • Elias Asimakis,
  • Ioannis Galiatsatos,
  • Amal Maurady and ,
  • Panagiota Stathopoulou and
  • George Tsiamis
  • + 1 author+ 0 author

Over the last decades, the analysis of complex microbial communities by high-throughput sequencing of marker gene amplicons has become routine work for many research groups. However, the main challenges faced by scientists who want to make use of the...

(This article belongs to the Special Issue Bioinformatics Research in Bacterial Genomics, Metagenomics and Metatranscriptomics)
  • Article
  • Open Access
16 Citations
5,253 Views
30 Pages

30 June 2022

Ecological forecasting is an emerging approach to estimate the future state of an ecological system with uncertainty, allowing society to better manage ecosystem services. Ecological forecasting is a core mission of the U.S. National Ecological Obser...

(This article belongs to the Section Environmental Forecasting)
  • Article
  • Open Access
3,128 Views
13 Pages

Democratizing Quantitative Data Analysis and Evaluation in Community-Based Research Through a New Automated Tool

  • Jonathan Bennett,
  • Mehdi Hajilo,
  • Anna Paula Della Rosa,
  • Rachel Arthur and ,
  • Wesley James and
  • Karen Matthews
  • + 1 author+ 0 author

Data from community-based research offer crucial insights into community needs, challenges, and strengths, informing effective decision making for development strategies. To ensure efficient analysis, accessible and user-friendly tools are necessary...

(This article belongs to the Special Issue Community Engagement and Community-Based Social Work Practices and Evaluations)
  • Article
  • Open Access
4 Citations
4,043 Views
10 Pages

The Recommended Uniform Screening Panel (RUSP) contains more than forty metabolic disorders recommended for inclusion in universal newborn screening (NBS). Tandem-mass-spectrometry-based screening of metabolic analytes in dried blood spot samples ide...

  • Article
  • Open Access
2,563 Views
17 Pages

The SAlzburg PEritoneal SUrface CAlculator (SAPESUCA): The First Web-Based Application for Peritoneal Surface Area Quantification

  • Tarkan Jäger,
  • Philipp Schredl,
  • Daniel Neureiter,
  • Jaroslav Presl and ,
  • Peter Tschann,
  • Ingmar Königsrainer,
  • Andreas Pascher,
  • Klaus Emmanuel,
  • Stephan Regenbogen and
  • Jan Philipp Ramspott
  • + 5 authors+ 0 author

10 June 2023

(1) Background: Peritoneal metastasized colorectal cancer is associated with a worse prognosis. The combination of cytoreductive surgery (CRS) and hyperthermic intraperitoneal chemotherapy (HIPEC) showed promising results in selected patients, but st...

(This article belongs to the Special Issue Clinical Studies in Peritoneal Surface Malignancies)
  • Article
  • Open Access
2 Citations
2,824 Views
19 Pages

Air Sensor Data Unifier: R-Shiny Application

  • Karoline K. Barkjohn,
  • Catherine Seppanen,
  • Saravanan Arunachalam,
  • Stephen Krabbe and
  • Andrea L. Clements

30 August 2025

Data is needed to understand local air quality, reduce exposure, and mitigate the negative impacts on human health. Measuring local air quality often requires a hybrid monitoring approach consisting of the national air monitoring network and one or m...

  • Article
  • Open Access
3 Citations
2,291 Views
26 Pages

The focus of this study, and the subject of this article, resides in the conceptually funded usability evaluation of an application of descriptive models to a specific dataset obtained from the East Slovak Institute of Heart and Vascular Diseases tar...

(This article belongs to the Special Issue Machine Learning and Deep Learning for Healthcare Data Processing and Analyzing)
  • Article
  • Open Access
2 Citations
4,555 Views
30 Pages

A Near Real-Time Hydrological Information System for the Upper Danube Basin

  • Thomas Pulka,
  • Ignacio Martin Santos,
  • Karsten Schulz and
  • Mathew Herrnegger

23 September 2021

The multi-national catchment of the Upper Danube covers an area of more than 100,000 km2 and is of great ecological and economic value. Its hydrological states (e.g., runoff conditions, snow cover states or groundwater levels) affect fresh-water supp...

(This article belongs to the Section Water Resources and Risk Management)
  • Article
  • Open Access
593 Views
29 Pages

A Shiny-Based Decision-Support Tool for Rainwater Harvesting, Tank Storage, and Crop Allocation Planning in Small-Scale Horticultural Gardens

  • Aurelio Guevara-Escobar,
  • Benjamin Valdés-Aguirre,
  • Eduardo Daniel Juárez-Pineda and
  • Adolfo Kunio Yabuta-Osorio

Harvested rainwater can support small-scale horticulture, but its value depends on the joint timing of rainfall, crop demand, capture area, and finite storage. We developed RainHarvest Garden Optimizer, an open-source R/Shiny decision-support applica...

(This article belongs to the Topic Smart Irrigation and Crop Management: Towards Sustainable and Resilient Agriculture)
  • Article
  • Open Access
7 Citations
2,860 Views
17 Pages

14 July 2024

This study presents the development and application of a prototype decision support system (DSS) for tree selection specifically for Punjab, India, a region facing challenges of low forest cover and an increasing demand for sustainable land use pract...

(This article belongs to the Section Forest Ecology and Management)
  • Article
  • Open Access
9 Citations
8,283 Views
13 Pages

Sentiment Analysis of Social Survey Data for Local City Councils

  • Marianna Lepelaar,
  • Adam Wahby,
  • Martha Rossouw,
  • Linda Nikitin and ,
  • Kanewa Tibble,
  • Peter J. Ryan and
  • Richard B. Watson
  • + 2 authors+ 0 author

Big data analytics can be used by smart cities to improve their citizens’ liveability, health, and wellbeing. Social surveys and also social media can be employed to engage with their communities, and these can require sophisticated analysis te...

(This article belongs to the Section Network Services and Applications)