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Viruses, Volume 14, Issue 11

November 2022 - 275 articles

Cover Story: Bacteriophages are viruses of bacteria, for which molecular mechanisms of host-hijacking remain poorly explored. In this work, we apply omics technologies—transcriptomics and proteomics—to temporally resolve transcription and protein synthesis during the T4 phage infection of E. coli on a molecular level. For E. coli, we observed degradation of its transcripts and the preservation of the proteome. For T4 phage, the correlation between the transcriptome and proteome reveals specific T4 phage mRNAs and proteins that are temporally decoupled, suggesting post-transcriptional and translational regulation mechanisms. Our tool, POTATO4, provides access to these first comprehensive insights into the gene expression patterns of T4 phage infection of E. coli. View this paper
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Articles (275)

  • Review
  • Open Access
3 Citations
3,275 Views
26 Pages

21 November 2022

Recombination and mutation of viral genomes represent major mechanisms for viral evolution and, in many cases, moderate pathogenicity. Segmented genome viruses frequently undergo reassortment of the genome via multiple infection of host organisms, wi...

  • Article
  • Open Access
3 Citations
2,228 Views
10 Pages

SARS-CoV-2 Variants Identification; A Fast and Affordable Strategy Based on Partial S-Gene Targeted PCR Sequencing

  • Antonio Martínez-Murcia,
  • Adrian Garcia-Sirera,
  • Aaron Navarro and
  • Laura Pérez

21 November 2022

A considerable number of new SARS-CoV-2 lineages have emerged since the first COVID-19 cases were reported in Wuhan. As a few variants showed higher COVID-19 disease transmissibility and the ability to escape from immune responses, surveillance becam...

  • Article
  • Open Access
10 Citations
3,749 Views
14 Pages

RSAD2 Is an Effective Target for High-Yield Vaccine Production in MDCK Cells

  • Zilin Qiao,
  • Yuejiao Liao,
  • Mengyuan Pei,
  • Zhenyu Qiu,
  • Zhenbin Liu,
  • Dongwu Jin,
  • Jiayou Zhang,
  • Zhongren Ma and
  • Xiaoming Yang

21 November 2022

Increasingly, attention has focused on improving vaccine production in cells using gene editing technology to specifically modify key virus regulation-related genes to promote virus replication. In this study, we used DIA proteomics analysis technolo...

  • Case Report
  • Open Access
5 Citations
2,873 Views
9 Pages

21 November 2022

Lymphocytic choriomeningitis virus (LCMV) is an emerging neuroteratogen which can infect humans via contact with urine, feces, saliva, or blood of infected rodents. When the infection occurs during pregnancy, there is a risk of transplacental infecti...

  • Article
  • Open Access
10 Citations
3,188 Views
20 Pages

Dual-RNAseq Analysis Unravels Virus-Host Interactions of MetSV and Methanosarcina mazei

  • Finn O. Gehlert,
  • Till Sauerwein,
  • Katrin Weidenbach,
  • Urska Repnik,
  • Daniela Hallack,
  • Konrad U. Förstner and
  • Ruth A. Schmitz

21 November 2022

Methanosarcina spherical virus (MetSV), infecting Methanosarcina species, encodes 22 genes, but their role in the infection process in combination with host genes has remained unknown. To study the infection process in detail, infected and uninfected...

  • Article
  • Open Access
9 Citations
4,436 Views
16 Pages

Characterization of Three Variants of SARS-CoV-2 In Vivo Shows Host-Dependent Pathogenicity in Hamsters, While Not in K18-hACE2 Mice

  • Gabriela Toomer,
  • Whitney Burns,
  • Liliana Garcia,
  • Gerelyn Henry,
  • Anthony Biancofiori,
  • Albert George,
  • Ciera Duffy,
  • Justin Chu,
  • Morgan Sides and
  • Melissa Muñoz
  • + 5 authors

21 November 2022

Animal models are used in preclinical trials to test vaccines, antivirals, monoclonal antibodies, and immunomodulatory drug therapies against SARS-CoV-2. However, these drugs often do not produce equivalent results in human clinical trials. Here, we...

  • Article
  • Open Access
22 Citations
3,313 Views
14 Pages

A Retrospective Study of Viral Molecular Prevalences in Cats in Southern Italy (Campania Region)

  • Maria Grazia Amoroso,
  • Francesco Serra,
  • Gianluca Miletti,
  • Lorena Cardillo,
  • Claudio de Martinis,
  • Luisa Marati,
  • Flora Alfano,
  • Gianmarco Ferrara,
  • Ugo Pagnini and
  • Esterina De Carlo
  • + 2 authors

21 November 2022

From 2019 to 2021, a retrospective molecular study was conducted in the Campania region (southern Italy) to determine the prevalence of viral diseases in domestic cats. A total of 328 dead animals were analyzed by Real-Time PCR for the presence of fe...

  • Article
  • Open Access
4 Citations
3,329 Views
12 Pages

Effects of Klebsiella pneumoniae Bacteriophages on IRAK3 Knockdown/Knockout THP-1 Monocyte Cell Lines

  • Bryce Dylan Schubert,
  • Heng Ku,
  • Mwila Kabwe,
  • Trang Hong Nguyen,
  • Helen Irving and
  • Joseph Tucci

21 November 2022

Bacterial sepsis characterised by an immunosuppressive and cytokine storm state is a challenge to treat clinically. While conventional antibiotics have been associated with exacerbating the cytokine storm, the role that bacteriophages may play in imm...

  • Article
  • Open Access
3 Citations
2,762 Views
12 Pages

Assessing the Pre-Vaccination Anti-SARS-CoV-2 IgG Seroprevalence among Residents and Staff in Nursing Home in Niigata, Japan, November 2020

  • Keita Wagatsuma,
  • Sayaka Yoshioka,
  • Satoru Yamazaki,
  • Ryosuke Sato,
  • Wint Wint Phyu,
  • Irina Chon,
  • Yoshiki Takahashi,
  • Hisami Watanabe and
  • Reiko Saito

21 November 2022

An outbreak of coronavirus disease 2019 (COVID-19) occurred in a nursing home in Niigata, Japan, November 2020, with an attack rate of 32.0% (63/197). The present study was aimed at assessing the pre-vaccination seroprevalence almost half a year afte...

  • Article
  • Open Access
5 Citations
2,195 Views
9 Pages

Evaluation of Rapid Dot-Immunoassay for Detection Orthopoxviruses Using Laboratory-Grown Viruses and Animal’s Clinical Specimens

  • Nikita Ushkalenko,
  • Anna Ersh,
  • Alexander Sergeev,
  • Pavel Filatov and
  • Alexander Poltavchenko

21 November 2022

The aim of the work was an experimental evaluation of the characteristics of the kit for the rapid immunochemical detection of orthopoxviruses (OPV). The kit is based on the method of one-stage dot-immunoassay on flat protein arrays using gold conjug...

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Viruses - ISSN 1999-4915