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33 Results Found

  • Article
  • Open Access
58 Citations
11,927 Views
21 Pages

20 June 2008

From the beginning of the antibiotic era in the 1940s to the present, Wyeth has sustained an active research program in the area of natural products discovery. This program has continually evolved through the years in order to best align with the “cu...

  • Article
  • Open Access
9 Citations
7,997 Views
21 Pages

5 December 2013

Phosphorylation is an important post-translational protein modification with regulatory roles in diverse cellular signaling pathways. Despite recent advances in mass spectrometry, the detection of phosphoproteins involved in signaling is still challe...

  • Article
  • Open Access
518 Views
19 Pages

11 November 2025

The optimization of distillation columns is critically important due to their substantial contribution to operational costs in the petrochemical industry. This paper introduces a computationally efficient surrogate-based optimization framework design...

  • Article
  • Open Access
17 Citations
4,045 Views
17 Pages

High Resolution Mass Profile of Bufadienolides and Peptides Combing with Anti-Tumor Cell Screening and Multivariate Analysis for the Quality Evaluation of Bufonis Venenum

  • Rongrong He,
  • Hongyue Ma,
  • Jing Zhou,
  • Zhenhua Zhu,
  • Xiang Lv,
  • Quan Li,
  • Hengbin Wang,
  • Yanqing Yan,
  • Niancui Luo and
  • Jinao Duan
  • + 2 authors

In order to evaluate the quality of Bufonis Venenum commercial herbs, a three-step qualitative and quantitative research study was performed. Firstly, we tried to identify small molecules and peptides in Bufonis Venenum using pre-fractionation chroma...

  • Article
  • Open Access
14 Citations
7,293 Views
16 Pages

A Routine ‘Top-Down’ Approach to Analysis of the Human Serum Proteome

  • Arlene M. D’Silva,
  • Jon A. Hyett and
  • Jens R. Coorssen

Serum provides a rich source of potential biomarker proteoforms. One of the major obstacles in analysing serum proteomes is detecting lower abundance proteins owing to the presence of hyper-abundant species (e.g., serum albumin and immunoglobulins)....

  • Article
  • Open Access
47 Citations
11,450 Views
12 Pages

Fractionated Marine Invertebrate Extract Libraries for Drug Discovery

  • Tim S. Bugni,
  • Mary Kay Harper,
  • Malcolm W.B. McCulloch,
  • Jason Reppart and
  • Chris M. Ireland

19 June 2008

The high-throughput screening and drug discovery paradigm has necessitated a change in preparation of natural product samples for screening programs. In an attempt to improve the quality of marine natural products samples for screening, several fract...

  • Article
  • Open Access
4 Citations
3,647 Views
16 Pages

Probing the Therapeutic Potential of Marine Phyla by SPE Extraction

  • Alejandro Moreiras-Figueruelo,
  • Genoveffa Nuzzo,
  • Christian Galasso,
  • Clementina Sansone,
  • Fabio Crocetta,
  • Valerio Mazzella,
  • Carmela Gallo,
  • Giusi Barra,
  • Angela Sardo and
  • Angelo Fontana
  • + 6 authors

16 November 2021

The marine environment is potentially a prolific source of small molecules with significant biological activities. In recent years, the development of new chromatographic phases and the progress in cell and molecular techniques have facilitated the s...

  • Article
  • Open Access
23 Citations
5,207 Views
20 Pages

22 June 2020

Despite the significant technical advancements in mass spectrometry-based proteomics and bioinformatics resources, dynamic resolution of soybean seed proteome is still limited because of the high abundance of seed storage proteins (SSPs). These SSPs...

  • Article
  • Open Access
22 Citations
8,067 Views
17 Pages

Potent Cytotoxic Peptides from the Australian Marine Sponge Pipestela candelabra

  • Trong D. Tran,
  • Ngoc B. Pham,
  • Gregory A. Fechner,
  • John N. A. Hooper and
  • Ronald J. Quinn

4 June 2014

Two consecutive prefractionated fractions of the Australian marine sponge extract, Pipestela candelabra, were identified to be selectively active on the human prostate cancer cells (PC3) compared to the human neonatal foreskin fibroblast non-cancer c...

  • Article
  • Open Access
12 Citations
4,340 Views
9 Pages

Identification of Potential Plasma Biomarkers for Abdominal Aortic Aneurysm Using Tandem Mass Tag Quantitative Proteomics

  • Anders E. Henriksson,
  • Markus Lindqvist,
  • Carina Sihlbom,
  • Jörgen Bergström and
  • Dan Bylund

18 October 2018

Plasma biomarkers that identify abdominal aortic aneurysm (AAA) rupture risk would greatly assist in stratifying patients with small aneurysms. Identification of such biomarkers has hitherto been unsuccessful over a range of studies using different m...

  • Article
  • Open Access
11 Citations
3,490 Views
17 Pages

A Fault Identification Method in Distillation Process Based on Dynamic Mechanism Analysis and Signed Directed Graph

  • Wende Tian,
  • Shifa Zhang,
  • Zhe Cui,
  • Zijian Liu,
  • Shaochen Wang,
  • Ya Zhao and
  • Hao Zou

26 January 2021

Due to the complexity of materials and energy cycles, the distillation system has numerous working conditions difficult to troubleshoot in time. To address the problem, a novel DMA-SDG fault identification method that combines dynamic mechanism analy...

  • Article
  • Open Access
2 Citations
5,485 Views
12 Pages

Comparing Simplification Strategies for the Skeletal Muscle Proteome

  • Bethany Geary,
  • Iain S. Young,
  • Phillip Cash,
  • Phillip D. Whitfield and
  • Mary K. Doherty

Skeletal muscle is a complex tissue that is dominated by the presence of a few abundant proteins. This wide dynamic range can mask the presence of lower abundance proteins, which can be a confounding factor in large-scale proteomic experiments. In th...

  • Article
  • Open Access
12 Citations
3,155 Views
28 Pages

Polyamide 11 Composites Reinforced with Diatomite Biofiller—Mechanical, Rheological and Crystallization Properties

  • Marta Dobrosielska,
  • Renata Dobrucka,
  • Dariusz Brząkalski,
  • Paulina Kozera,
  • Agnieszka Martyła,
  • Ewa Gabriel,
  • Krzysztof J. Kurzydłowski and
  • Robert E. Przekop

21 March 2023

Amorphic diatomaceous earth is derived from natural sources, and polyamide 11 (PA11) is produced from materials of natural origin. Both of these materials show a low harmfulness to the environment and a reduced carbon footprint. This is why the combi...

  • Article
  • Open Access
32 Citations
7,319 Views
19 Pages

A Dereplication and Bioguided Discovery Approach to Reveal New Compounds from a Marine-Derived Fungus Stilbella fimetaria

  • Sara Kildgaard,
  • Karolina Subko,
  • Emma Phillips,
  • Violaine Goidts,
  • Mercedes De la Cruz,
  • Caridad Díaz,
  • Charlotte H. Gotfredsen,
  • Birgitte Andersen,
  • Jens C. Frisvad and
  • Thomas O. Larsen
  • + 1 author

13 August 2017

A marine-derived Stilbella fimetaria fungal strain was screened for new bioactive compounds based on two different approaches: (i) bio-guided approach using cytotoxicity and antimicrobial bioassays; and (ii) dereplication based approach using liquid...

  • Feature Paper
  • Article
  • Open Access
5 Citations
3,908 Views
17 Pages

Evaluating Marine Cyanobacteria as a Source for CNS Receptor Ligands

  • Andrea L. Rague,
  • Stacy-Ann J. Parker and
  • Kevin J. Tidgewell

17 October 2018

Natural products have a long history as a source of psychoactive agents and pharmacological tools for understanding the brain and its circuitry. In the last two decades, marine cyanobacteria have become a standard source of natural product ligands wi...

  • Article
  • Open Access
16 Citations
5,292 Views
26 Pages

Chemical Elicitors Induce Rare Bioactive Secondary Metabolites in Deep-Sea Bacteria under Laboratory Conditions

  • Rafael de Felício,
  • Patricia Ballone,
  • Cristina Freitas Bazzano,
  • Luiz F. G. Alves,
  • Renata Sigrist,
  • Gina Polo Infante,
  • Henrique Niero,
  • Fernanda Rodrigues-Costa,
  • Arthur Zanetti Nunes Fernandes and
  • Daniela Barretto Barbosa Trivella
  • + 8 authors

12 February 2021

Bacterial genome sequencing has revealed a vast number of novel biosynthetic gene clusters (BGC) with potential to produce bioactive natural products. However, the biosynthesis of secondary metabolites by bacteria is often silenced under laboratory c...

  • Proceeding Paper
  • Open Access
11 Citations
11,101 Views
13 Pages

Recent Advances in Reactive Distillation

  • Demi Andrei Barrientos,
  • Beatrice Fernandez,
  • Rachel Morante,
  • Hannah Ruth Rivera,
  • Karen Simeon and
  • Edgar Clyde R. Lopez

26 October 2023

Reactive distillation (RD) combines chemical reactions and separation in a single unit essential to equilibrium-limited reactions. This new technique encompasses multiple advantages over traditional processes, including lower operating costs, increas...

  • Article
  • Open Access
33 Citations
7,852 Views
19 Pages

Characterization of Rhamnolipids Produced by an Arctic Marine Bacterium from the Pseudomonas fluorescence Group

  • Venke Kristoffersen,
  • Teppo Rämä,
  • Johan Isaksson,
  • Jeanette Hammer Andersen,
  • William H. Gerwick and
  • Espen Hansen

14 May 2018

The marine environment is a rich source of biodiversity, including microorganisms that have proven to be prolific producers of bioactive secondary metabolites. Arctic seas are less explored than warmer, more accessible areas, providing a promising st...

  • Article
  • Open Access
7 Citations
4,340 Views
29 Pages

Characterization of Constituents with Potential Anti-Inflammatory Activity in Chinese Lonicera Species by UHPLC-HRMS Based Metabolite Profiling

  • Eva-Maria Pferschy-Wenzig,
  • Sabine Ortmann,
  • Atanas G. Atanasov,
  • Klara Hellauer,
  • Jürgen Hartler,
  • Olaf Kunert,
  • Markus Gold-Binder,
  • Angela Ladurner,
  • Elke H. Heiß and
  • Rudolf Bauer
  • + 11 authors

25 March 2022

This study centered on detecting potentially anti-inflammatory active constituents in ethanolic extracts of Chinese Lonicera species by taking an UHPLC-HRMS-based metabolite profiling approach. Extracts from eight different Lonicera species were subj...

  • Review
  • Open Access
69 Citations
8,222 Views
15 Pages

Innovating the Concept and Practice of Two-Dimensional Gel Electrophoresis in the Analysis of Proteomes at the Proteoform Level

  • Xianquan Zhan,
  • Biao Li,
  • Xiaohan Zhan,
  • Hartmut Schlüter,
  • Peter R. Jungblut and
  • Jens R. Coorssen

30 October 2019

Two-dimensional gel electrophoresis (2DE) is an important and well-established technical platform enabling extensive top-down proteomic analysis. However, the long-held but now largely outdated conventional concepts of 2DE have clearly impacted its a...

  • Article
  • Open Access
7 Citations
4,783 Views
15 Pages

Comparing Composition Control Structures for Kaibel Distillation Columns

  • Yang Yuan,
  • Kejin Huang,
  • Haisheng Chen,
  • Xing Qian,
  • Lijing Zang,
  • Liang Zhang and
  • Shaofeng Wang

13 February 2020

Although Kaibel distillation columns are superior to conventional distillation sequences owing to smaller equipment investment and operation cost, they display high nonlinearity and this greatly increases the difficulty of achieving their tight contr...

  • Article
  • Open Access
6 Citations
7,990 Views
17 Pages

Modeling/Simulation of the Dividing Wall Column by Using the Rigorous Model

  • Chi Zhai,
  • Qinjun Liu,
  • Jose A. Romagnoli and
  • Wei Sun

8 January 2019

Dividing wall column (DWC) is an atypical distillation column with an internal, vertical WE partition wall that effectively accommodates two conventional distillation columns into one to improve the thermodynamic efficiency. In previous studies, diff...

  • Review
  • Open Access
17 Citations
8,951 Views
23 Pages

Scorpion Venom as a Source of Antimicrobial Peptides: Overview of Biomolecule Separation, Analysis and Characterization Methods

  • Sara Nasr,
  • Adolfo Borges,
  • Christina Sahyoun,
  • Riad Nasr,
  • Rabih Roufayel,
  • Christian Legros,
  • Jean-Marc Sabatier and
  • Ziad Fajloun

Scorpion venoms have long captivated scientific researchers, primarily due to the potency and specificity of the mechanism of action of their derived components. Among other molecules, these venoms contain highly active compounds, including antimicro...

  • Article
  • Open Access
28 Citations
9,294 Views
26 Pages

Tannin Extraction from Chestnut Wood Waste: From Lab Scale to Semi-Industrial Plant

  • Clelia Aimone,
  • Giorgio Grillo,
  • Luisa Boffa,
  • Samuele Giovando and
  • Giancarlo Cravotto

15 February 2023

The chestnut tree (Castanea sativa, Mill.) is a widespread plant in Europe whose fruits and wood has a relevant economic impact. Chestnut wood (CW) is rich in high-value compounds that exhibit various biological activities, such as antioxidant as wel...

  • Article
  • Open Access
12 Citations
8,550 Views
13 Pages

A Simple Method for Measuring Carbon-13 Fatty Acid Enrichment in the Major Lipid Classes of Microalgae Using GC-MS

  • Sheik Nadeem Elahee Doomun,
  • Stella Loke,
  • Sean O’Callaghan and
  • Damien L. Callahan

11 November 2016

A simple method for tracing carbon fixation and lipid synthesis in microalgae was developed using a combination of solid-phase extraction (SPE) and negative ion chemical ionisation gas chromatography mass spectrometry (NCI-GC-MS). NCI-GC-MS is an ext...

  • Article
  • Open Access
39 Citations
8,430 Views
27 Pages

Simultaneous Pathoproteomic Evaluation of the Dystrophin-Glycoprotein Complex and Secondary Changes in the mdx-4cv Mouse Model of Duchenne Muscular Dystrophy

  • Sandra Murphy,
  • Michael Henry,
  • Paula Meleady,
  • Margit Zweyer,
  • Rustam R. Mundegar,
  • Dieter Swandulla and
  • Kay Ohlendieck

10 June 2015

In skeletal muscle, the dystrophin-glycoprotein complex forms a membrane-associated assembly of relatively low abundance, making its detailed proteomic characterization in normal versus dystrophic tissues technically challenging. To overcome this ana...

  • Article
  • Open Access
13 Citations
6,746 Views
14 Pages

Plant extracts from the genus Cecropia have been used by Latin-American traditional medicine to treat metabolic disorders and diabetes. Previous results have shown that roots of Cecropia telenitida contain pentacyclic triterpenes and these molecules...

  • Article
  • Open Access
18 Citations
5,911 Views
12 Pages

Identification of a 3-Alkylpyridinium Compound from the Red Sea Sponge Amphimedon chloros with In Vitro Inhibitory Activity against the West Nile Virus NS3 Protease

  • Aubrie O’Rourke,
  • Stephan Kremb,
  • Brendan M. Duggan,
  • Salim Sioud,
  • Najeh Kharbatia,
  • Misjudeen Raji,
  • Abdul-Hamid Emwas,
  • William H. Gerwick and
  • Christian R. Voolstra

Viruses are underrepresented as targets in pharmacological screening efforts, given the difficulties of devising suitable cell-based and biochemical assays. In this study we found that a pre-fractionated organic extract of the Red Sea sponge Amphimed...

  • Article
  • Open Access
23 Citations
8,632 Views
20 Pages

Radiosensitization of Human Leukemic HL-60 Cells by ATR Kinase Inhibitor (VE-821): Phosphoproteomic Analysis

  • Barbora Šalovská,
  • Ivo Fabrik,
  • Kamila Ďurišová,
  • Marek Link,
  • Jiřina Vávrová,
  • Martina Řezáčová and
  • Aleš Tichý

7 July 2014

DNA damaging agents such as ionizing radiation or chemotherapy are frequently used in oncology. DNA damage response (DDR)—triggered by radiation-induced double strand breaks—is orchestrated mainly by three Phosphatidylinositol 3-kinase-related kinase...

  • Article
  • Open Access
41 Citations
9,249 Views
20 Pages

Proteome Profile and Quantitative Proteomic Analysis of Buffalo (Bubalusbubalis) Follicular Fluid during Follicle Development

  • Qiang Fu,
  • Yulin Huang,
  • Zhiqiang Wang,
  • Fumei Chen,
  • Delun Huang,
  • Yangqing Lu,
  • Xianwei Liang and
  • Ming Zhang

Follicular fluid (FF) accumulates in the antrum of the ovarian follicle and provides the microenvironment for oocyte development. FF plays an important role in follicle growth and oocyte maturation. The FF provides a unique window to investigate the...

  • Article
  • Open Access
9 Citations
3,000 Views
14 Pages

30 November 2021

N-Ethyl-2-pyrrolidinone-substituted flavanols (EPSF) are marker compounds for long-term stored white teas. However, due to their low contents and diasteromeric configuration, EPSF compounds are challenging to isolate. In this study, two representativ...

  • Article
  • Open Access
23 Citations
7,358 Views
18 Pages

Egg White and Yolk Protein Atlas: New Protein Insights of a Global Landmark Food

  • Eleana Sarantidi,
  • Alexandra Ainatzoglou,
  • Christine Papadimitriou,
  • Eleni Stamoula,
  • Katerina Maghiorou,
  • Argyro Miflidi,
  • Antonia Trichopoulou,
  • Konstantinos C. Mountzouris and
  • Athanasios K. Anagnostopoulos

18 September 2023

(1) Background: The chicken egg is an animal product of great agronomic interest. The egg white and yolk constitute high-quality protein sources for humans with high digestibility and well-balanced amino acid profiles. Despite the egg white and yolk...

  • Article
  • Open Access
991 Views
20 Pages

Targeted Isolation of Prenylated Flavonoids from Paulownia tomentosa Fruit Extracts via AI-Guided Workflow Integrating LC-UV-HRMS/MS

  • Tomas Rypar,
  • Lenka Molcanova,
  • Barbora Valkova,
  • Ema Hromadkova,
  • Christoph Bueschl,
  • Bernhard Seidl,
  • Karel Smejkal and
  • Rainer Schuhmacher

17 September 2025

Objectives: This study presents a versatile, AI-guided workflow for the targeted isolation and characterization of prenylated flavonoids from Paulownia tomentosa (Thunb.) Steud. (Paulowniaceae). Methods: The approach integrates established extraction...