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22 Results Found

  • Review
  • Open Access
19 Citations
5,467 Views
14 Pages

The statistical mechanics-based 3-dimensional reference interaction site model with the Kovalenko-Hirata closure (3D-RISM-KH) molecular solvation theory has proven to be an essential part of a multiscale modeling framework, covering a vast region of...

(This article belongs to the Special Issue Advances in Molecular Simulation)
  • Review
  • Open Access
5 Citations
3,125 Views
24 Pages

Viruses are the most numerous biological form living in any ecosystem. Viral diseases affect not only people but also representatives of fauna and flora. The latest pandemic has shown how important it is for the scientific community to respond quickl...

(This article belongs to the Special Issue Advanced Research in Molecular Modeling of Protein Structure and Functions)
  • Article
  • Open Access
2 Citations
4,366 Views
10 Pages

13 October 2021

The three-dimensional reference interaction site model of the molecular solvation theory with the Kovalenko–Hirata closure is used to calculate the free energy of solvation of organic solutes in liquid aliphatic ketones. The ketone solvent sites were...

(This article belongs to the Special Issue Advance in Molecular Thermodynamics)
  • Article
  • Open Access
2 Citations
4,155 Views
10 Pages

4 September 2021

The Three-Dimensional Reference Interaction Site Model (3D-RISM) with Kovalenko−Hirata (KH) closure is applied to calculate the 1,9-Decadiene/Water partition coefficients for a diverse class of compounds. The liquid state of 1,9-Decadiene is represen...

(This article belongs to the Special Issue Physical Chemistry Perspectives for the New Decade)
  • Article
  • Open Access
7 Citations
3,474 Views
8 Pages

Effects of Water Addition on a Catalytic Fluorination of Dienamine

  • Daiki Kuraoku,
  • Tsunaki Yonamine,
  • Genta Koja,
  • Norio Yoshida and ,
  • Satoru Arimitsu and
  • Masahiro Higashi
  • + 1 author+ 0 author

21 September 2019

We investigate the effects of water addition on a highly stereocontrolled fluorination of dienamine generated by α-branched enals and 6′-hydroxy-9-amino-9-deoxy-epi-quinidine with N-fluorobenzenesulfonimide (NFSI) in the presence of Br&os...

(This article belongs to the Special Issue Fabulous Fluorine in Organic and Medicinal Chemistry)
  • Article
  • Open Access
2 Citations
1,973 Views
14 Pages

20 May 2024

This study proposes a three-dimensional upper bound solution for estimating the soil thrust of tracked vehicles on saturated clay slopes. The present study considered block, triangular wedge, and trapezoidal wedge failure modes to formulate an upper...

(This article belongs to the Special Issue Advances in Failure Mechanism and Numerical Methods for Geomaterials)
  • Article
  • Open Access
17 Citations
4,468 Views
18 Pages

5 December 2019

The zinc metallopeptidase Pseudomonas elastase (LasB) is a virulence factor of Pseudomonas aeruginosa (P. aeruginosa), a pathogenic bacterium that can cause nosocomial infections. The present study relates the structural analysis of 118 N-alpha-merca...

(This article belongs to the Special Issue New Avenues in Molecular Docking for Drug Design 2020)
  • Article
  • Open Access
9 Citations
2,619 Views
14 Pages

24 December 2022

After the Fukushima nuclear accident in Japan, whether the structural safety of the nuclear power plant (NPP) can be guaranteed under an earthquake has been of wide concern. Automatic seismic trip systems (ASTS) have been deployed in NPPs. There are...

(This article belongs to the Section B4: Nuclear Energy)
  • Article
  • Open Access
463 Views
22 Pages

25 August 2026

When large liquefied natural gas (LNG) storage tanks are constructed on deep non-rock sites, soil–foundation–structure interaction (SFSI) alters the dynamic characteristics of the system and affects the actual control effectiveness of the...

  • Article
  • Open Access
22 Citations
7,701 Views
12 Pages

10 February 2021

Currently, SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) has infected people among all countries and is a pandemic as declared by the World Health Organization (WHO). SARS-CoVID-2 main protease is one of the therapeutic drug targets th...

(This article belongs to the Special Issue Molecular Docking in Drug Discovery)
  • Article
  • Open Access
35 Citations
5,389 Views
27 Pages

27 April 2023

Macao is a tourist city. It is home to the Ruins of Saint Paul’s, a unique 100-year-old landmark, which is still standing with manual maintenance, even after three fires and reconstruction events. Therefore, the continuous preservation of its c...

(This article belongs to the Special Issue Sustainable Learning in Education of Sustainability)
  • Article
  • Open Access
2 Citations
1,594 Views
21 Pages

24 July 2025

Seismic responses of Nuclear Island (NI) structures have great significance in the foundation adaptability analysis and the seismic design of equipment. However, with the increasing complexity of nuclear power site conditions, establishing a reasonab...

(This article belongs to the Special Issue Dynamic Response of Civil Engineering Structures under Seismic Loads)
  • Article
  • Open Access
5 Citations
2,313 Views
27 Pages

14 May 2024

Soil–structure interaction (SSI) refers to the dynamic interaction between a structure and the surrounding soil on which it rests. The behavior of the soil can significantly affect the response of the building structure. In the context of civil...

(This article belongs to the Topic Materials Science and Engineering in Vibrations and Seismicity)
  • Article
  • Open Access
2 Citations
1,683 Views
21 Pages

23 February 2025

In order to further study the dynamic response and damage status of the subway station structure and promote the development of the TOD (transit-oriented development) mode structure system, this paper proposes a calibration method for the seismic per...

(This article belongs to the Topic New Trends in Advanced Construction Technology, Sustainable Construction Materials and High-Performance Building Structures)
  • Article
  • Open Access
7 Citations
1,814 Views
15 Pages

Human Serum Albumin: 3D Insight on Protein Hydration

  • Marina V. Fedotova and
  • Sergey E. Kruchinin

18 December 2025

Human serum albumin (HSA) is one of the main proteins in human blood plasma and serves as a molecular “taxi” transporting various compounds, including organic compounds, drugs, metal ions, etc., through the circulatory system throughout t...

(This article belongs to the Collection State-of-the-Art Macromolecules in Russia)
  • Article
  • Open Access
12 Citations
6,633 Views
19 Pages

Site Density Functional Theory and Structural Bioinformatics Analysis of the SARS-CoV Spike Protein and hACE2 Complex

  • Nitesh Kumawat,
  • Andrejs Tucs,
  • Soumen Bera,
  • Gennady N. Chuev and ,
  • Marat Valiev,
  • Marina V. Fedotova,
  • Sergey E. Kruchinin,
  • Koji Tsuda,
  • Adnan Sljoka and
  • Amit Chakraborty
  • + 5 authors+ 0 author

26 January 2022

The entry of the SARS-CoV-2, a causative agent of COVID-19, into human host cells is mediated by the SARS-CoV-2 spike (S) glycoprotein, which critically depends on the formation of complexes involving the spike protein receptor-binding domain (RBD) a...

(This article belongs to the Special Issue Density Functional Theory in the Age of Chemical Intelligence)
  • Review
  • Open Access
80 Citations
7,653 Views
34 Pages

Modifying the Tumour Microenvironment: Challenges and Future Perspectives for Anticancer Plasma Treatments

  • Angela Privat-Maldonado,
  • Charlotta Bengtson,
  • Jamoliddin Razzokov,
  • Evelien Smits and
  • Annemie Bogaerts

2 December 2019

Tumours are complex systems formed by cellular (malignant, immune, and endothelial cells, fibroblasts) and acellular components (extracellular matrix (ECM) constituents and secreted factors). A close interplay between these factors, collectively call...

(This article belongs to the Special Issue Plasma in Cancer Treatment)
  • Article
  • Open Access
18 Citations
7,015 Views
13 Pages

Repurposing of FDA-Approved NSAIDs for DPP-4 Inhibition as an Alternative for Diabetes Mellitus Treatment: Computational and in Vitro Study

  • Veera C. S. R. Chittepu,
  • Poonam Kalhotra,
  • Tzayhri Osorio-Gallardo,
  • Tzayhri Gallardo-Velázquez and
  • Guillermo Osorio-Revilla

A drug repurposing strategy could be a potential approach to overcoming the economic costs for diabetes mellitus (DM) treatment incurred by most countries. DM has emerged as a global epidemic, and an increase in the outbreak has led developing countr...

  • Article
  • Open Access
10 Citations
3,637 Views
20 Pages

Protein 3D Hydration: A Case of Bovine Pancreatic Trypsin Inhibitor

  • Sergey E. Kruchinin,
  • Ekaterina E. Kislinskaya,
  • Gennady N. Chuev and
  • Marina V. Fedotova

26 November 2022

Characterization of the hydrated state of a protein is crucial for understanding its structural stability and function. In the present study, we have investigated the 3D hydration structure of the protein BPTI (bovine pancreatic trypsin inhibitor) by...

(This article belongs to the Special Issue Protein Structure Research)
  • Article
  • Open Access
2,278 Views
16 Pages

30 September 2025

We present three dimensional particle-in-cell simulations of current-voltage characteristics of the hemispherical Langmuir probe (LAP), onboard the China Seismo-Electromagnetic Satellite (CSES). Using realistic plasma parameters and background magnet...

  • Article
  • Open Access
17 Citations
7,154 Views
16 Pages

Investigations of the Copper Peptide Hepcidin-25 by LC-MS/MS and NMR

  • Ioana M. Abbas,
  • Marija Vranic,
  • Holger Hoffmann,
  • Ahmed H. El-Khatib and ,
  • María Montes-Bayón,
  • Heiko M. Möller and
  • Michael G. Weller
  • + 2 authors+ 0 author

Hepcidin-25 was identified as the main iron regulator in the human body, and it by binds to the sole iron-exporter ferroportin. Studies showed that the N-terminus of hepcidin is responsible for this interaction, the same N-terminus that encompasses a...

(This article belongs to the Section Molecular Biophysics)
  • Article
  • Open Access
7 Citations
3,569 Views
25 Pages

Geometric Accuracy Evaluation Method for Subway Stations Based on 3D Laser Scanning

  • Quankai Wang,
  • Peng Qian,
  • Yunping Liu,
  • Tao Li and ,
  • Lei Yang and
  • Fan Yang
  • + 1 author+ 0 author

22 September 2022

The rapid development of three-dimensional (3D) laser scanning technology has provided a new technical means for the geometric accuracy evaluation of subway stations. With high precision and high efficiency, laser scanning technology can present the...