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18 Results Found

  • Review
  • Open Access
69 Citations
20,627 Views
22 Pages

Design Strategies of Fluorescent Biosensors Based on Biological Macromolecular Receptors

  • Kazuki Tainaka,
  • Reiko Sakaguchi,
  • Hironori Hayashi,
  • Shun Nakano and ,
  • Fong Fong Liew and
  • Takashi Morii
  • + 1 author+ 0 author

12 February 2010

Fluorescent biosensors to detect the bona fide events of biologically important molecules in living cells are increasingly demanded in the field of molecular cell biology. Recent advances in the development of fluorescent biosensors have made an outs...

(This article belongs to the Special Issue Fluorescent Chemosensors)
  • Article
  • Open Access
17 Citations
6,393 Views
22 Pages

Crosslinking of CD38 Receptors Triggers Apoptosis of Malignant B Cells

  • M. Tommy Gambles,
  • Jiahui Li,
  • Jiawei Wang,
  • Douglas Sborov and ,
  • Jiyuan Yang and
  • Jindřich Kopeček
  • + 1 author+ 0 author

31 July 2021

Recently, we designed an inventive paradigm in nanomedicine—drug-free macromolecular therapeutics (DFMT). The ability of DFMT to induce apoptosis is based on biorecognition at cell surface, and crosslinking of receptors without the participation of l...

(This article belongs to the Special Issue Nanotechnology to Overcome World’s Most Critical Health Issues: Liposomes and beyond—a Themed Issue Dedicated to Professor Yechezkel Barenholz)
  • Review
  • Open Access
24 Citations
6,774 Views
30 Pages

30 January 2019

Single-particle tracking (SPT) has been used and developed over the last 25 years as a method to investigate molecular dynamics, structure, interactions, and function in the cellular context. SPT is able to show how fast and how far individual molecu...

(This article belongs to the Special Issue Single-Molecule Techniques)
  • Article
  • Open Access
52 Citations
7,575 Views
16 Pages

MD–Ligand–Receptor: A High-Performance Computing Tool for Characterizing Ligand–Receptor Binding Interactions in Molecular Dynamics Trajectories

  • Michele Pieroni,
  • Francesco Madeddu,
  • Jessica Di Martino,
  • Manuel Arcieri and ,
  • Valerio Parisi,
  • Paolo Bottoni and
  • Tiziana Castrignanò
  • + 2 authors+ 0 author

Molecular dynamics simulation is a widely employed computational technique for studying the dynamic behavior of molecular systems over time. By simulating macromolecular biological systems consisting of a drug, a receptor and a solvated environment w...

(This article belongs to the Special Issue Research on Molecular Dynamics)
  • Article
  • Open Access
11 Citations
9,787 Views
12 Pages

Target Profile Prediction and Practical Evaluation of a Biginelli-Type Dihydropyrimidine Compound Library

  • Petra Schneider,
  • Katharina Stutz,
  • Ladina Kasper,
  • Sarah Haller and ,
  • Michael Reutlinger,
  • Felix Reisen,
  • Tim Geppert and
  • Gisbert Schneider
  • + 3 authors+ 0 author

20 September 2011

We present a self-organizing map (SOM) approach to predicting macromolecular targets for combinatorial compound libraries. The aim was to study the usefulness of the SOM in combination with a topological pharmacophore representation (CATS) for select...

(This article belongs to the Special Issue Advances in Drug Design)
  • Article
  • Open Access
9 Citations
3,888 Views
10 Pages

Studies on the Inhibition of Ectonucleotide Pyrophosphatase/Phosphodiesterase 1 (ENPP1) by 2-(3,4-Dihydroxyphenyl)-7,8-dihydroxy-3-methoxychromen-4-one, a Flavonoid from Pistacia chinensis

  • Abdur Rauf,
  • Zuneera Akram,
  • Muhammad Naveed,
  • Najla AlMasoud and ,
  • Taghrid S. Alomar,
  • Muhammad Saleem,
  • Abdul Waheed and
  • Giovanni Ribaudo
  • + 3 authors+ 0 author

30 September 2023

Ectonucleotide pyrophosphatase/phosphodiesterase 1 (ENPP1) regulates skeletal and soft tissue mineralization by hydrolyzing nucleotide triphosphates and cyclic nucleotides, and is involved in the modulation of immune system. In fact, ENPP1 degrades 2...

(This article belongs to the Section Medicinal Chemistry)
  • Review
  • Open Access
16 Citations
12,991 Views
20 Pages

Methods and Analysis of Biological Contaminants in the Biomanufacturing Industry

  • Mohammad Janghorban,
  • Sara Kazemi,
  • Rigel Tormon,
  • Philippa Ngaju and
  • Richa Pandey

The advent of bioprocessing has revolutionized the biomanufacturing industry, leading to the rise of biotherapeutics derived from biologic products such as chimeric antigen receptor (CAR) T-cells used for targeted cancer treatment and the Vero cell l...

(This article belongs to the Special Issue 10th Anniversary of Chemosensors: Miniaturized Analytical Devices for Chemical and Biological Sensing)
  • Review
  • Open Access
2,254 Citations
125,442 Views
38 Pages

Molecular Docking and Structure-Based Drug Design Strategies

  • Leonardo G. Ferreira,
  • Ricardo N. Dos Santos,
  • Glaucius Oliva and
  • Adriano D. Andricopulo

22 July 2015

Pharmaceutical research has successfully incorporated a wealth of molecular modeling methods, within a variety of drug discovery programs, to study complex biological and chemical systems. The integration of computational and experimental strategies...

(This article belongs to the Special Issue Molecular Docking in Drug Design)
  • Article
  • Open Access
6 Citations
2,910 Views
18 Pages

From Structure to Function: The Impact of EGFR and IGF-IR in 3D Breast Cancer Spheroids

  • Chrisavgi Gourdoupi,
  • Spyros Kremmydas,
  • Sylvia Mangani,
  • Paraskevi Ioannou and ,
  • Nikolaos A. Afratis,
  • Zoi Piperigkou and
  • Nikos K. Karamanos
  • + 2 authors+ 0 author

8 August 2025

Background: Breast cancer, one of the most researched cancers in oncology, remains the primary cause of cancer-related mortality in women. Its biological complexity, which includes phenotypic, genetic, and microenvironmental aspects, makes modeling a...

(This article belongs to the Special Issue Extracellular Matrix Proteins in Cancer)
  • Article
  • Open Access
64 Citations
9,076 Views
20 Pages

Kunitz-Type Peptide HCRG21 from the Sea Anemone Heteractis crispa Is a Full Antagonist of the TRPV1 Receptor

  • Margarita Monastyrnaya,
  • Steve Peigneur,
  • Elena Zelepuga,
  • Oksana Sintsova and ,
  • Irina Gladkikh,
  • Elena Leychenko,
  • Marina Isaeva,
  • Jan Tytgat and
  • Emma Kozlovskaya
  • + 4 authors+ 0 author

15 December 2016

Sea anemone venoms comprise multifarious peptides modulating biological targets such as ion channels or receptors. The sequence of a new Kunitz-type peptide, HCRG21, belonging to the Heteractis crispa RG (HCRG) peptide subfamily was deduced on the ba...

(This article belongs to the Collection Bioactive Compounds from Marine Invertebrates)
  • Article
  • Open Access
1,378 Views
17 Pages

pIgR Stem Zone-Targeted Nanobodies as Apical-to-Basolateral Carriers for Inhaled Biologic Delivery Across Mucosal Barriers

  • Aidong Qiu,
  • Ruiyuan Wang,
  • Yangyingjie Bai,
  • Bowen Zhang and ,
  • Xinyu He,
  • Jiani Xie and
  • Jianghai Liu
  • + 2 authors+ 0 author

Background: The mucosal barrier presents a significant challenge for non-invasive delivery of macromolecular therapeutics, often requiring administration with poor bioavailability and increased toxicity risks. The polymeric immunoglobulin receptor (p...

(This article belongs to the Section Antibody Discovery and Engineering)
  • Review
  • Open Access
77 Citations
16,041 Views
19 Pages

Biomimetic Strategies for Sensing Biological Species

  • Munawar Hussain,
  • Judith Wackerlig and
  • Peter A. Lieberzeit

6 February 2013

The starting point of modern biosensing was the application of actual biological species for recognition. Increasing understanding of the principles underlying such recognition (and biofunctionality in general), however, has triggered a dynamic fiel...

(This article belongs to the Special Issue Organic Electronic Bio-Devices)
  • Communication
  • Open Access
14 Citations
9,746 Views
14 Pages

25 September 2013

Pseudomonas aeruginosa is a human pathogen associated with a variety of life-threatening nosocomial infections. This organism produces a range of virulence factors which actively cause damage to host tissues. One such virulence factor is pyocyanin,...

(This article belongs to the Special Issue Reagents and Methods for Protein Target Identification)
  • Review
  • Open Access
17 Citations
6,359 Views
15 Pages

The greatest challenges for therapeutic efficacy of many macromolecular drugs that act on intracellular are delivery to key organs and tissues and delivery into cells and subcellular compartments. Transport of drugs into critical cells associated wit...

(This article belongs to the Special Issue Mucopolysaccharidoses: Diagnosis, Treatment, and Management)
  • Review
  • Open Access
24 Citations
6,072 Views
28 Pages

In multicellular organisms, interactions between cells and intercellular communications form the very basis of the organism’s survival, the functioning of its systems, the maintenance of homeostasis and adequate response to the environment. The...

(This article belongs to the Special Issue Intercellular and Intracellular Communication in Human Health and Disease 2.0)
  • Review
  • Open Access
20 Citations
8,298 Views
37 Pages

Novel Small-Molecule Treatment and Emerging Biological Therapy for Psoriasis

  • Yuanyuan Li,
  • Yiheng Cheng,
  • Yuchen Cai,
  • Zhenduo Duan and ,
  • Hong Xu,
  • Yunan Huang,
  • Xiaonan Ma,
  • Xiaofei Xin and
  • Lifang Yin
  • + 4 authors+ 0 author

Psoriasis is an immune-related disorder that is marked by abnormal thickening of the skin, the rapid multiplication of keratinocytes, and complex interactions between immune cells and the affected areas. Although psoriasis cannot currently be cured,...

(This article belongs to the Section Molecular Genetics and Genetic Diseases)
  • Review
  • Open Access
301 Views
27 Pages

28 September 2026

Ethnopharmacological relevance: Sophora flavescens Ait. (S. flavescens) is a classical traditional Chinese medicine (TCM) with a long history of clinical use for clearing heat, drying dampness, killing parasites, and promoting diuresis. In recent yea...

(This article belongs to the Section Medicinal Chemistry)
  • Review
  • Open Access
32 Citations
5,908 Views
22 Pages

The extracellular matrix (ECM) of the brain is a dynamic structure made up of a vast network of bioactive macromolecules that modulate cellular events. Structural, organizational, and functional changes in these macromolecules due to genetic variatio...

(This article belongs to the Special Issue Extracellular Matrix in Development and Disease 4.0)