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  • Article
  • Open Access
118 Views
17 Pages

Computational Approach to Possible Interactions of Gliclazide with Proteins of Inflammatory, Oxidative Stress and Endoplasmic Reticulum Stress Pathways

  • Olabisi Tajudeen Obafemi,
  • Ademola Olabode Ayeleso,
  • Blessing Ariyo Obafemi,
  • Jeremiah Oshiomame Unuofin,
  • Adewale Odunayo Oladipo,
  • Sogolo Lucky Lebelo and
  • Monde Ntwasa

The present study aims to evaluate the interaction of gliclazide with proteins related to inflammation—{inhibitor of nuclear factor kappa-B kinase subunit beta (IKKα) and NF-kappa-B-inducing kinase (NIK)}; oxidative stress—{kelch do...

  • Review
  • Open Access
269 Views
18 Pages

Despite significant advances in neurosurgical and critical care, traumatic brain injury (TBI) remains a major cause of morbidity and mortality. Surgical treatment of intracranial hemorrhagic lesions can only target the primary mechanical injuries and...

  • Review
  • Open Access
320 Views
14 Pages

Background: Caveolin-1 (Cav-1) is a protein found in various forms and locations within cells and tissues throughout the body. Studying its structure and function provides valuable insights into key cellular processes such as growth, death, and cell...

  • Review
  • Open Access
204 Views
34 Pages

Bridging the Gap: A Scoping Review of Pre-Analytical Variability in Biofluid Metabolomics

  • Yumna Ladha,
  • Sushmita Sanaka,
  • Adam Burke,
  • Royston Goodacre,
  • Karina T. Wright,
  • Jade Perry and
  • Charlotte H. Hulme

Metabolic profiling enables comprehensive characterisation of the small molecules that are part of the biochemical composition of biological fluids. The most widely profiled biofluids include serum and plasma. Additionally synovial fluid provides a d...

  • Review
  • Open Access
453 Views
19 Pages

The Allium cepa Assay as a Versatile Tool for Genotoxicity and Cytotoxicity: Methods, Applications, and Comparative Insight

  • Olivia Torres-Bugarín,
  • Isaac Gómez-Ferreyra,
  • Mario Contreras-Dueñas,
  • María Luisa Ramos-Ibarra,
  • Rafael Bello-Bedoy,
  • Alejandro Sánchez-González,
  • Francisco Casillas-Figueroa,
  • Balam Ruiz-Ruiz,
  • Karina Iveth Orozco-Jiménez and
  • María Evarista Arellano-García

Background: The Allium cepa test is a widely used, cost-effective, and versatile model for assessing cytogenotoxicity. Cytotoxicity is determined through changes in root growth and the mitotic index, while genotoxicity is identified through chromosom...

  • Article
  • Open Access
202 Views
12 Pages

BorMax, a Novel Dhillonvirus Infecting MDR Escherichia coli: Genomic Insights, Taxonomic Position, and Anti-CRISPR Repertoire

  • Maximiliano Sandoval,
  • Dylan Zapata,
  • Dácil Rivera,
  • Elkin Y. Suarez-Villota and
  • Boris Parra

Escherichia coli is a major pathogen responsible for urinary tract infections, septicemia, and other clinically relevant conditions, with increasing multidrug resistance (MDR) limiting available treatment options. In this context, bacteriophages repr...

  • Review
  • Open Access
236 Views
23 Pages

Beyond Folding: The Dual Life of Hsp60 in Tissue Homeostasis and Pathophysiology

  • Giuseppa D’Amico,
  • Melania Ionelia Gratie,
  • Giuseppe Vergilio,
  • Francesco Cappello and
  • Alessandra Maria Vitale

The heat shock protein 60 (Hsp60) is a highly conserved molecular chaperonin belonging to the chaperone system, a complex network that maintains proteostasis and regulates numerous cellular processes beyond protein folding. Initially described as a m...

  • Systematic Review
  • Open Access
309 Views
16 Pages

Probiotics, whether consisting of a single strain or multiple strains, are attracting growing interest in the management of type 2 diabetes mellitus (T2DM). However, their efficacy remains a matter of controversy and requires careful consideration. A...

  • Article
  • Open Access
242 Views
24 Pages

Classification of Apis cerana Populations Using Deep Learning Based on Morphometrics of Forewing in Thailand

  • Nattawut Chumnoi,
  • Papinwich Paimsang,
  • Watcharaporn Cholamjiak and
  • Tipwan Suppasat

This study aimed to develop a robust morphometric-based framework for classifying Apis cerana populations using deep learning and machine learning approaches. Previous studies on Apis cerana population differentiation have primarily relied on manual...

  • Article
  • Open Access
208 Views
14 Pages

Mtx1 is a mosquitocidal protein that exhibits high toxicity toward Culex species. It is produced during the vegetative phase of Lysinibacillus sphaericus but at very low levels and is rapidly degraded. The low expression appears to result from a weak...

  • Article
  • Open Access
413 Views
14 Pages

One of the global challenges is the deficit of food. Food production is highly dependent on the productivity of agricultural plants used by humans and livestock. Various chemical and natural compounds are used to stimulate plant growth and increase t...

  • Article
  • Open Access
1 Citations
689 Views
13 Pages

Genome-Wide Identification and Phylogenetic Analysis of Cell Wall Remodeling Genes in Carica papaya L.

  • Miguel Salvador-Adriano,
  • Miguel Angel Reyes-López,
  • José Alberto Narváez-Zapata,
  • Raymundo Rosas-Quijano and
  • Didiana Gálvez-López

Fruit softening in Carica papaya L. is a significant postharvest limitation, primarily driven by the dynamic remodeling of cell wall polysaccharides. In this study, we conducted a genome-wide identification and in silico characterization of gene fami...

  • Article
  • Open Access
793 Views
19 Pages

Enhanced Antitumor Effect of Oncolytic Virotherapy Combined with mRNA-Encoded Immunoadjuvants in Colorectal Carcinoma (CT26) Tumor Model

  • Anastasia Ryapolova,
  • Daniil Shevyrev,
  • Angela Tsvetkova,
  • Olesya Sokolova,
  • Olga Vasileva,
  • Vladimir Andriianov,
  • Bogdan Krapivin,
  • Alena Kozlova,
  • Kristina Vorona and
  • Ekaterina Minskaia
  • + 4 authors

The search for effective anti-cancer therapies is one of the most significant goals of modern medicine. The combination of oncolytic viruses (OV) and mRNA immunoadjuvants can significantly improve the outcome or even substitute traditional immunother...

  • Article
  • Open Access
702 Views
20 Pages

Biodegradation of Cellulose—Laboratory Scale Analysis of Bacterial Consortium Isolated from a Methanogenic Anaerobic Bioreactor

  • Yana Gocheva,
  • Lyudmila Dimitrova,
  • Maya Zaharieva,
  • Venelin Hubenov,
  • Yana Ilieva,
  • Petya Orozova,
  • Vyacheslav Ilyin,
  • Denis Korshunov,
  • Ivan Simeonov and
  • Hristo Najdenski
  • + 1 author

Urban areas and suburbs are facing many environmental problems, one of which is the increasing pollution due to the accumulation of cellulosic waste. This article presents a laboratory study on the microbial biodegradation processes of paper as a cel...

  • Article
  • Open Access
542 Views
21 Pages

Composition of Organic Fertilizers Containing Microorganisms and Their Effect on Soil Microbiological Activity and Plant Growth

  • Māris Seņkovs,
  • Laila Dubova,
  • Ina Alsiņa,
  • Ingrīda Krīgere,
  • Dagnija Lazdiņa,
  • Viktorija Vendiņa,
  • Sandra Marcinkeviča and
  • Vizma Nikolajeva

The conversion of livestock manure and peat into value-added fertilizers provides an environmentally sustainable approach to nutrient recycling and waste management. In this study, organic fertilizers were formulated from poultry, pig, and cattle man...

  • Article
  • Open Access
636 Views
16 Pages

Performance of Radiologists in Characterizing and Diagnosing Hepatic Lesions Using Dynamic Contrast-Enhanced CT With and Without Artificial Intelligence

  • Daiki Nishigaki,
  • Atsushi Nakamoto,
  • Takahiro Tsuboyama,
  • Hiromitsu Onishi,
  • Yuki Suzuki,
  • Tomohiro Wataya,
  • Kosuke Kita,
  • Junya Sato,
  • Miyuki Tomiyama and
  • Noriyuki Tomiyama
  • + 3 authors

Background: To investigate the performance of radiologists in characterizing and diagnosing hepatic lesions with and without the assistance of deep learning-based artificial intelligence (AI). Methods: This retrospective study included 83 nodules/mas...

  • Article
  • Open Access
998 Views
24 Pages

BPM1, a representative of the plant MATH-BTB protein family comprises three conserved domains—MATH, BTB, and BACK—that facilitate diverse protein–protein interactions central to developmental processes. However, recombinant producti...

  • Article
  • Open Access
761 Views
14 Pages

Oxidative stress is a major contributor to genomic instability and a key factor in the etiology of various chronic diseases. Natural compounds with antioxidant and DNA-protective properties are increasingly being explored as potential preventive agen...

  • Article
  • Open Access
1,195 Views
13 Pages

Unravelling the Molecular Mechanism of HIV-TAT-Tagged β-Amyloid-Induced Neurotoxicity via Lamin Fragmentation

  • Md. Selim Hossain,
  • Vijay Sankar Ramasamy,
  • Md. Aminul Haque,
  • Kamarajan Rajagopalan and
  • Il-Seon Park

The HIV-1 transactivator of transcription (TAT) protein enhances beta amyloid (Aβ42) neurotoxicity and may accelerate Alzheimer’s disease (AD)-related neuronal damage, yet its impact on nuclear architecture remains unclear. In this study,...

  • Review
  • Open Access
1,391 Views
25 Pages

Synergies Between Robotics, AI, and Bioengineering—A Narrative Review Concerning the Future of Transplants

  • Domiziana Picone,
  • Giuseppa D’Amico,
  • Adelaide Carista,
  • Olga Maria Manna,
  • Stefano Burgio and
  • Alberto Fucarino

The critical shortage of donor organs remains the foremost challenge in transplantation medicine. Nevertheless, advancements in robotic-assisted surgery (RAS), artificial intelligence (AI)-enhanced donor–recipient matching, and bioengineering&m...

  • Article
  • Open Access
1,169 Views
34 Pages

Plant variety/genotype identification has many applications in establishing the identity of plants, including the protection of intellectual property rights and the management of ex situ conservation of genetic resources. The variety may be important...

  • Article
  • Open Access
1,099 Views
16 Pages

Purpose: As animal welfare becomes increasingly important, there is a corresponding desire to reduce the number of animals used in experiments. Recently, we reported on statistical models for a local anaesthetic simulator and developed a simulator fo...

  • Article
  • Open Access
702 Views
19 Pages

The Inhibition of Pancreatic α-Amylase by Monomeric, Dimeric and Trimeric Procyanidins Is Dependent upon the Structural Characteristics of Inhibitors and Substrates

  • Jocelin Violeta Aguilar-López,
  • Ana V. Arras-Gardea,
  • Alejandra I. Martinez-Gonzalez,
  • Emilio Alvarez-Parrilla and
  • Laura A. de la Rosa

Procyanidins are oligomeric flavonoids with several bioactive properties. Their antidiabetic potential is related to their capacity to inhibit enzymes responsible for the absorption of dietary carbohydrates, such as pancreatic α-amylase. Procya...

  • Article
  • Open Access
2 Citations
1,270 Views
23 Pages

Impact of Structural Relaxation on Protein–Protein Docking in Large Macromolecular Complexes

  • Raissa Santos de Lima Rosa,
  • Ana Carolina Silva Bulla,
  • Rafael C. Bernardi and
  • Manuela Leal da Silva

Protein–protein docking is a cornerstone of computational structural biology, yet its reliability for large, multimeric assemblies remains uncertain. Standard workflows typically include geometry optimization or molecular dynamics equilibration...

  • Review
  • Open Access
2,942 Views
52 Pages

This review considers L-ascorbic acid as a test substance in designing a dermal drug delivery system for carrying a hydrophilic, low-stability API. Actual studies of nano delivery systems carrying L-ascorbic acid are reviewed. L-ascorbic acid and oth...

  • Review
  • Open Access
1 Citations
1,777 Views
27 Pages

Food spoilage and contamination remain pressing global challenges, undermining food security and safety while driving economic losses. Conventional preservation strategies, including thermal treatments, refrigeration, and synthetic additives, often c...

  • Article
  • Open Access
1,190 Views
19 Pages

Structural and Dynamic Properties of Chemically Crosslinked Mammalian and Fish Gelatin Hydrogels

  • Vladislav Abramov,
  • Ivan V. Lunev,
  • Ilnaz T. Rakipov,
  • Alena A. Nikiforova,
  • Mariia A. Kazantseva,
  • Olga S. Zueva and
  • Yuriy F. Zuev

Gelatin is a collagen-derived biopolymer widely used in food, pharmaceutical and biomedical applications due to its biocompatibility and gelling ability. However, gelatin hydrogels suffer from unstable mechanical strength, limited thermal resistance...

  • Article
  • Open Access
3 Citations
2,039 Views
17 Pages

In this study, zinc oxide nanoparticles (ZnO NPs) were synthesized via a green chemistry approach using aqueous extract of Camellia sinensis var. assamica (Assam green tea) as a bioreductant and stabilizing agent. Phytochemical analysis of the extrac...

  • Article
  • Open Access
3,073 Views
28 Pages

Evaluation of the Effects of Demineralization and Decellularization for the Development of a Decellularized Bone Matrix from Tuna (Thunnus albacares) Bone

  • Zesreal Cain Bantilan,
  • Marionilo Labares,
  • Johnel Alimasag,
  • Kit Dominick Don Valle,
  • Chancy Louisse Barlisan,
  • Elizer Eleccion and
  • Ronald Bual

The exploration of alternative sources of extracellular matrix (ECM) is driven by increasing demand and the need for sustainable biomaterials. Tuna (Thunnus albacares) bones, a by-product of the fishing industry, represent a potential ECM source due...

  • Article
  • Open Access
5,196 Views
17 Pages

An Improved Approach to Protoplast Regeneration and Transfection in Banana (Musa acuminata AAA cv. Williams)

  • Pradeep Chand Deo,
  • Jean-Yves Paul,
  • Anthony James,
  • Rob Harding and
  • James Dale

Protoplasts offer a promising alternative to embryogenic cell suspensions (ECS) for gene editing in banana, potentially overcoming several limitations associated with ECS-based transformation systems. This study aimed to optimize protoplast isolation...

  • Article
  • Open Access
1,568 Views
17 Pages

Gamma Irradiation Enhances the In Vitro Biocontrol Potential of Trichoderma Species Against Major Rice Pathogens Rhizoctonia solani and Pyricularia oryzae

  • Bang Diep Tran,
  • Huyen Thanh Tran,
  • Dang Sang Hoang,
  • Hong Nhung Tran,
  • Ngoc Khanh Linh Dao,
  • Xuan Vinh Le,
  • Xuan An Tran,
  • Hong Duong Nguyen,
  • Thi Thu Hong Le and
  • Thi Huyen Do

Improving the efficacy of microbial biocontrol agents is a pivotal strategy for sustainable management of rice blast and sheath blight caused by Pyricularia oryzae and Rhizoctonia solani, respectively, in Vietnam. In this study, Trichoderma sp. TVN-A...

  • Article
  • Open Access
1,223 Views
20 Pages

Deformed wing virus (DWV) is a major contributor to honey bee colony losses, making effective monitoring essential for apiary management. Traditional DWV detection relies on hazardous RNA extraction followed by RT-qPCR, creating barriers for widespre...

  • Article
  • Open Access
1,194 Views
14 Pages

Comparison of Susceptibility to Microbiological Contamination in FAMEs Synthesized from Residual and Refined Lard During Simulated Storage

  • Samuel Lepe-de-Alba,
  • Conrado Garcia-Gonzalez,
  • Fernando A. Solis-Dominguez,
  • Rafael Martínez-Miranda,
  • Mónica Carrillo-Beltrán,
  • José L. Arcos-Vega,
  • Carlos A. Sagaste-Bernal,
  • Armando Pérez-Sánchez,
  • Marcos A. Coronado-Ortega and
  • José R. Ayala-Bautista

The present research features an experimental comparative design and the objective of this work was to determine the susceptibility to microbiological contamination in fatty acid methyl esters (FAMEs) and the FAME–water interface of residual an...

  • Article
  • Open Access
3,544 Views
14 Pages

Toothpaste is an essential oral hygiene product commonly used to sustain oral health due to its incorporation of antimicrobial agents. Numerous functional toothpastes enriched with antimicrobial agents have been developed and are available to consume...

  • Review
  • Open Access
1,501 Views
15 Pages

Plant Latex Proteases in Hemostasis: Beyond Thrombin-like Activity

  • Linesh-Kumar Selvaraja and
  • Siti-Balqis Zulfigar

Plant latex is a rich source of proteolytic enzymes with potential biomedical applications, particularly in hemostasis. Among them, thrombin-like enzymes (TLEs) have garnered interest in their ability to mimic thrombin by catalyzing the conversion of...

  • Review
  • Open Access
3,241 Views
12 Pages

The discovery that human beings may endogenously produce ethanol is not new and dates back at the end of the 19th century; recently, however, it has become clear that through the proliferation of gut microorganisms that produce ethanol from sugars or...

  • Article
  • Open Access
1 Citations
1,660 Views
18 Pages

Spatial and Seasonal Analysis of Phyllosphere Bacterial Communities of the Epiphytic Gymnosperm Zamia pseudoparasitica

  • Lilisbeth Rodríguez-Castro,
  • Adriel M. Sierra,
  • Juan Carlos Villarreal Aguilar and
  • Kristin Saltonstall

Phyllosphere microbial communities influence the growth and productivity of plants, particularly in epiphytic plants, which are disconnected from nutrients available in the soil. We characterized the phyllosphere of 30 individuals of the epiphytic cy...

  • Feature Paper
  • Article
  • Open Access
1 Citations
1,454 Views
14 Pages

Bioinformatics Analysis of Unique High-Density Lipoprotein-MicroRNAs Cargo Reveals Its Neurodegenerative Disease Potential

  • Diana Marisol Abrego-Guandique,
  • Maria Cristina Caroleo,
  • Filippo Luciani and
  • Erika Cione

Recent findings have identified high-density lipoprotein (HDL) as a carrier of microRNAs, small non-coding RNAs that regulate gene expression, suggesting a potential novel functional and biochemical role for HDL-microRNA cargo. Here, we conduct an in...

  • Article
  • Open Access
1 Citations
1,171 Views
14 Pages

Robinia pseudoacacia is one of the most widely introduced—but also controversial—tree species in Europe. On the one hand, it is valued for its productivity, timber quality, and melliferous blossom. On the other hand, it is highly invasive...

  • Article
  • Open Access
1,608 Views
17 Pages

Multi-Sensor Comparison for Nutritional Diagnosis in Olive Plants: A Machine Learning Approach

  • Catarina Manuelito,
  • João de Deus,
  • Miguel Damásio,
  • André Leitão,
  • Luís Alcino Conceição,
  • Rocío Arias-Calderón,
  • Carla Inês,
  • António Manuel Cordeiro,
  • Eduardo Fernandes and
  • José Silvestre
  • + 3 authors

The intensification of olive growing has raised environmental concerns, particularly regarding nutrient loss from excessive fertiliser use. In line with the European Union’s Farm to Fork strategy, which aims to halve the soil nutrient losses by...

  • Article
  • Open Access
1,196 Views
17 Pages

Microencapsulated Jaboticaba Berry (M. cauliflora) Juice Improves Storage Stability and In Vitro Bioaccessibility of Polyphenols

  • Tatiana de Muros Amaral Barcellos,
  • Mônica Volino-Souza,
  • Carini Aparecida Lelis,
  • Carlos Adam Conte Junior and
  • Thiago da Silveira Alvares

Jaboticaba berry is a rich source of polyphenols with bioactive properties. However, polyphenols are known for their high reactivity under environmental conditions, which poses a challenge to producing stable, functional components for the food indus...

  • Article
  • Open Access
863 Views
37 Pages

In this paper, we present three log-linear models for comparing spectral density functions (SDFs) of neural spike sequences (NSSs). The logarithmic (ln) ratios of the estimated SDFs are modeled as polynomial expressions with respect to angular freque...

  • Article
  • Open Access
2 Citations
1,976 Views
15 Pages

Linear DNA–Chitosan Nanoparticles: Formulation Challenges and Transfection Efficiency in Lung Cell Line

  • Chiara Migone,
  • Angela Fabiano,
  • Ylenia Zambito,
  • Rebecca Piccarducci,
  • Laura Marchetti,
  • Chiara Giacomelli,
  • Claudia Martini and
  • Anna Maria Piras

Linear DNA constructs are used in gene delivery and therapy application due to their capacity of integration into the mammalian genome, offering stable transgene expression. Compared to circular plasmids, linear DNA also has the advantage that its di...

  • Article
  • Open Access
1 Citations
5,314 Views
15 Pages

A Flow Cytometry Protocol for Measurement of Plant Genome Size Using Frozen Material

  • Abhishek Soni,
  • Lena Constantin,
  • Agnelo Furtado and
  • Robert J Henry

Flow cytometry is widely applied to infer the ploidy and genome size (GS) of plant nuclei. The conventional approach of sample preparation, reliant on fresh plant material to release intact nuclei, often results in poor yields of nuclei in conditions...

  • Article
  • Open Access
9 Citations
7,455 Views
17 Pages

Green Synthesis and Characterization of Iron Oxide Nanoparticles Using Egeria densa Plant Extract

  • Maruf Olaide Yekeen,
  • Mubarak Ibrahim,
  • James Wachira and
  • Saroj Pramanik

An aqueous leaf extract of Egeria densa was used to green-synthesize iron (II) and iron (III) oxide nanoparticles from ferrous sulphate and ferric chloride, respectively. The successful green synthesis of the nanoparticles was confirmed through UV&nd...

  • Review
  • Open Access
1 Citations
3,172 Views
17 Pages

This review examines the history of consumption, life cycle, and culture conditions of seven edible mucilaginous terrestrial cyanobacterial strains—Nostoc flagelliforme, Nostoc commune, Nostoc sphaeroides, Nostoc sphaericum, Nostoc verrucosum,...

  • Article
  • Open Access
3,972 Views
13 Pages

Direct Expression of CPT1a Enables a High Throughput Platform for the Discovery of CPT1a Modulators

  • Jason Chen,
  • Tuyen Tran,
  • Anthony Wong,
  • Luofei Wang,
  • Pranavi Annaluru,
  • Vibha Sreekanth,
  • Samika Murthy,
  • Laasya Munjeti,
  • Tanya Park and
  • Zhan Chen
  • + 13 authors

Carnitine palmitoyltransferase 1 (CPT1), which catalyzes the rate-limiting step of fatty acid oxidation, has been implicated in therapeutic approaches to several human diseases characterized by aberrant lipid metabolism. The isoform-specific quantifi...

  • Review
  • Open Access
3 Citations
4,094 Views
13 Pages

Urinary Markers for Prostate Cancer: State of the Art

  • Carlo Giorgio Costi,
  • Serena Sartori,
  • Riccardo Danuso,
  • Andrea Piasentin,
  • Paolo Umari and
  • Giovanni Liguori

Prostate cancer (PCa) is one of the most common malignancies in men, where early and accurate detection is crucial. While PSA testing has been the diagnostic standard, its limited specificity leads to unnecessary biopsies and missed significant cance...

  • Review
  • Open Access
6 Citations
4,773 Views
34 Pages

Can Caenorhabditis elegans Serve as a Reliable Model for Drug and Nutraceutical Discovery?

  • Opeyemi. O. Deji-Oloruntoba,
  • Taiwo. O. Elufioye,
  • Stephen Adeniyi Adefegha and
  • Miran Jang

Experimental research demands the selection of appropriate models to align with study objectives and conditions. Traditional experimental models, such as in vivo animal studies and in vitro systems like organoids, present nutraceutical and pharmaceut...

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Appl. Biosci. - ISSN 2813-0464