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Journal of Fungi, Volume 11, Issue 4

2025 April - 90 articles

Cover Story: The human body hosts a diverse community of microorganisms, with bacteria being the most commonly studied. However, fungi—collectively known as the mycobiota—are increasingly being recognized as key microbiota members, inhabiting nearly all mucosal surfaces. Commensal fungi influence host immunity and contribute to crucial functions such as metabolism. This positions fungi as potential biomarkers for diagnosing and predicting various diseases. This review examines the dual roles of fungi, as both commensals and pathogens, and antifungal antibodies’ potential as diagnostic and prognostic tools, particularly in chronic immune-inflammatory non-communicable diseases. Finally, we address current challenges and future directions for using fungal biomarkers in clinical practice. View this paper
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Articles (90)

  • Article
  • Open Access
3 Citations
2,363 Views
19 Pages

1 April 2025

Schizophyllum commune, a Basidiomycota fungus with a tetrapolar mating system, serves as a key model for studying sexual reproduction. In this study, two distinct mating subtypes (I and II) were identified in strain 20R-7-ZF01, isolated from subseafl...

  • Article
  • Open Access
1,168 Views
12 Pages

New Bioactive Sesquiterpeniods from the Plant-Derived Endophytic Fungus Schizophyllum sp. HM230

  • Shi-Yu Li,
  • Lan Yao,
  • Jian-Hua Lv,
  • Zhuang Li,
  • Shuai Xu,
  • Yu Li,
  • Dan Li and
  • Chang-Tian Li

1 April 2025

Endophytic fungi provide valuable sources for the discovery of secondary metabolites that can be used as lead compounds in drug discovery. In this study, four new sesquiterpenoids with a farnesane backbone, schizophyllol A–B (12) and sch...

  • Article
  • Open Access
1 Citations
1,238 Views
18 Pages

Exploring the Biodiversity and Antibacterial Potential of the Culturable Soil Fungi in Nyingchi, Tibet

  • Shan-Shan Huang,
  • Haishan Liu,
  • Xia-Fei Li,
  • Chun-Ying Wang,
  • Xiujun Zhang,
  • Juan-Juan Wang,
  • Fuhang Song,
  • Jie Bao and
  • Hua Zhang

1 April 2025

The Qinghai-Tibet Plateau, known as “the third pole” of the Earth, boasts unique climatic conditions with abundant sunlight, low temperature, and significant annual temperature variations, nurturing a diverse array of soil microorganisms...

  • Article
  • Open Access
2 Citations
1,421 Views
21 Pages

1 April 2025

Glycine betaine (GB) serves as both a methyl donor and osmoprotectant in microorganisms, facilitating growth and enhancing metabolic product yields. While the polyketide metabolites from Monascus purpureus, such as Monascus pigments (MPs) and monacol...

  • Case Report
  • Open Access
2,388 Views
10 Pages

Invasive Fungal Infection by Scedosporium apiospermum with Cerebral Involvement in a Pediatric Patient Affected by Chronic Granulomatous Disease After Hematopoietic Cell Transplant

  • Chiara Garonzi,
  • Matteo Chinello,
  • Giulia Caddeo,
  • Elisa Bonetti,
  • Maria Pia Esposto,
  • Vincenza Pezzella,
  • Virginia Vitale,
  • Ada Zaccaron,
  • Annarita Sorrentino and
  • Simone Cesaro
  • + 1 author

1 April 2025

A 5-year-old boy affected by chronic granulomatous disease (CGD) underwent two allogeneic hematopoietic cell transplants (HCT) from the same unrelated donor. The first HCT was complicated by prolonged fever and primary graft failure. While fully apla...

  • Article
  • Open Access
3 Citations
4,071 Views
10 Pages

The Efficacy of a Combination of Selected Azole Antifungals and Plant Essential Oil Components Against Malassezia pachydermatis

  • Eva Čonková,
  • Shiri Karasenti,
  • Peter Váczi,
  • Zuzana Malinovská and
  • Miriam Bačkorová

1 April 2025

Infections caused by Malassezia (M.) pachydermatis in dogs are mostly treated with azole antifungals. Excessive use of these drugs is usually associated with an increased incidence of resistant isolates, which can be prevented by combining commonly u...

  • Review
  • Open Access
8 Citations
6,261 Views
24 Pages

Resilience in Resistance: The Role of Cell Wall Integrity in Multidrug-Resistant Candida

  • Iván A. Banda-Flores,
  • David Torres-Tirado,
  • Héctor M. Mora-Montes,
  • Gabriela Pérez-Flores and
  • Luis A. Pérez-García

1 April 2025

The Candida species cell wall plays a pivotal role as a structural and functional barrier against external aggressors and as an intermediary in host–pathogen interactions. Candida species exhibit unique adaptations in their cell wall compositio...

  • Brief Report
  • Open Access
1 Citations
1,085 Views
6 Pages

Evaluation of the DendrisKIT®DP for the Diagnosis of Superficial Fungal Infections

  • Pauline Tirard-Collet,
  • François Durupt,
  • Marion Hérault,
  • Charline Miossec,
  • Jean-Philippe Lemoine,
  • Martine Wallon,
  • Damien Dupont,
  • Florence Persat and
  • Jean Menotti

1 April 2025

Conventional diagnosis of fungal infections of the skin, nail, and hair requires both expertise in mycology and prolonged cultures. We evaluated a new molecular tool based on an innovative technology, the DendrisKIT®DP, combining a pan-fungal PCR...

  • Article
  • Open Access
3 Citations
2,604 Views
14 Pages

31 March 2025

Beer, the most popular alcoholic beverage, poses health risks for individuals with gout and hyperuricemia due to its high purine content. Herein, we identified a novel purine nucleoside phosphorylase (AbPNP) from the edible mushroom Agaricus bisporus...

  • Article
  • Open Access
3 Citations
1,515 Views
14 Pages

31 March 2025

Mycoviruses are viruses that infect fungi, including plant pathogens. The infection of these mycoviruses is sometimes associated with impaired phenotypes of their fungal hosts, a phenomenon known as hypovirulence. Thus, using mycoviruses as biologica...

  • Article
  • Open Access
9 Citations
1,926 Views
18 Pages

Transcriptome Analysis Revealed That Cell Wall Regulatory Pathways Are Involved in the Tolerance of Pleurotus ostreatus Mycelia to Different Heat Stresses

  • Ludan Hou,
  • Jingyi Wang,
  • Tonglou Li,
  • Baosheng Zhang,
  • Kexing Yan,
  • Zehua Zhang,
  • Xueran Geng,
  • Mingchang Chang and
  • Junlong Meng

30 March 2025

Pleurotus ostreatus is the third largest cultivated species in China’s edible mushroom industry; however, its agricultural cultivation method is easily affected by high-temperature environments. To understand the response mechanism of mycelia t...

  • Article
  • Open Access
3 Citations
1,493 Views
19 Pages

The Antifungal Activity and Mechanism of Dehydroabietic Acid Against Alternaria alternata Causing Poplar Leaf Spot

  • Yun-Ze Chen,
  • Yun-Di Zhang,
  • Cheng Chen,
  • Qiu-Er Sa,
  • Jing Yang and
  • Guo-Cai Zhang

28 March 2025

Dehydroabietic acid (DHA) is a secondary metabolite isolated from rosin, which has certain antifungal activity, but its inhibitory effects against Alternaria alternata are unclear. In the present study, we found that DHA inhibited the mycelial growth...

  • Article
  • Open Access
1 Citations
1,460 Views
22 Pages

28 March 2025

Fungi infestation as a disease has serious impacts on the cultivation of Morchella species. To investigate the effects of fungi infestation on the microbial diversity and community structure of soil when cultivating Morchella sextelata, we sampled so...

  • Review
  • Open Access
6 Citations
4,739 Views
24 Pages

Fusarium Species Associated with Diseases of Citrus: A Comprehensive Review

  • Mihlali Badiwe,
  • Régis Oliveira Fialho,
  • Charles Stevens,
  • Paul-Henri Lombard and
  • Jan van Niekerk

28 March 2025

The citrus industry contributes to the cultivation of one of the most important fruit crops globally. However, citrus trees are susceptible to numerous Bisifusarium, Fusarium, and Neocosmospora-linked diseases, with dry root rot posing a serious thre...

  • Article
  • Open Access
3 Citations
1,478 Views
15 Pages

Fungal Community Complexity and Stability in Clay Loam and Sandy Soils in Mangrove Ecosystems

  • Shengyao Zhou,
  • Xiaojie Deng,
  • Rajapakshalage Thashikala Nethmini,
  • Huaxian Zhao,
  • Qing He,
  • Gonglingxia Jiang,
  • Qinghua Hou,
  • Qingxiang Chen,
  • Xiaolei Li and
  • Nan Li
  • + 1 author

28 March 2025

Soil fungi in mangroves are diverse and crucial for organic matter decomposition and element cycling. However, the drivers influencing network complexity and the stability of fungal communities across different mangrove soil habitats remain unclear....

  • Article
  • Open Access
3 Citations
3,140 Views
18 Pages

Associations Between Indoor Fungal Community Structures and Environmental Factors: Insights from the Evidence-Driven Indoor Air-Quality Improvement Study

  • Iva Šunić,
  • Dubravka Havaš Auguštin,
  • Jelena Šarac,
  • Kristina Michl,
  • Tomislav Cernava,
  • Rasmus Riemer Jakobsen,
  • Armin Mešić,
  • Natalija Novokmet and
  • Mario Lovrić

28 March 2025

Indoor fungal communities, found in household dust, significantly influence indoor air quality and health. These communities are shaped by environmental, socioeconomic, and household factors. However, studies on indoor mycobiomes, particularly in Cro...

  • Review
  • Open Access
1 Citations
2,898 Views
19 Pages

The Role of Oral Yeasts in the Development and Progression of Oral Squamous Cell Carcinoma: A Scoping Review

  • Satutya Wicaksono,
  • Zilefac Brian Ngokwe,
  • Michael McCullough and
  • Tami Yap

27 March 2025

The role of oral yeasts in oral squamous cell carcinoma (OSCC) has gained attention due to evidence linking fungal dysbiosis to carcinogenesis. While Candida albicans has been the primary focus, emerging studies highlight the importance of non-Candid...

  • Review
  • Open Access
4 Citations
2,658 Views
25 Pages

27 March 2025

Stropharia rugosoannulata and Macrolepiota procera have garnered considerable attention due to their distinctive flavor profile, culinary versatility, and potential nutritional and therapeutic benefits. They are a rich source of high-quality protein,...

  • Review
  • Open Access
16 Citations
7,552 Views
18 Pages

Invasive Candidiasis in the Intensive Care Unit: Where Are We Now?

  • Jose A. Vazquez,
  • Lissette Whitaker and
  • Ana Zubovskaia

27 March 2025

Invasive fungal infections in the intensive care unit (ICU) are not uncommon and most cases are caused by Candida species, specifically Candida albicans. However, recently, there has been an increase in non-albicans Candida spp. (C. glabrata; C....

  • Article
  • Open Access
5 Citations
1,298 Views
16 Pages

27 March 2025

Pear Valsa cankers were found in various Korla fragrant pear orchards in Alaer, Xinjiang. Disease samples underwent tissue isolation, resulting in six isolates. Pathogenicity tests revealed that the XLFL-6 isolate was the most virulent, demonstrating...

  • Review
  • Open Access
16 Citations
3,861 Views
17 Pages

Molecular Mechanisms of Pathogenic Fungal Virulence Regulation by Cell Membrane Phospholipids

  • Yitong Li,
  • Hongchen Wang,
  • Hengxiu Wang,
  • Tianming Wang,
  • Daqiang Wu and
  • Wenfan Wei

26 March 2025

Pathogenic fungi represent a growing concern for human health, necessitating a deeper understanding of their molecular mechanisms of virulence to formulate effective antifungal strategies. Recent research has increasingly highlighted the role of phos...

  • Article
  • Open Access
3 Citations
2,178 Views
21 Pages

Characterization of Virulence Factors, Cellular Stress Response, and Antifungal Susceptibility Testing of Trichosporon spp. Isolated from Northeast Brazilian Patients

  • Márcia Gabriele de Souza Jimenez,
  • Matheus Firmino de Azevedo,
  • Elaine Cristina Francisco,
  • Ana Maria de Andrade Oliveira Boczar,
  • Ana Carolina Barbosa Padovan,
  • Eveline Pipolo Milan,
  • Walicyranison Plinio da Silva Rocha and
  • Guilherme Maranhão Chaves

26 March 2025

Trichosporon spp. are emerging pathogens that may cause high mortality rates, specifically among immunocompromised individuals. The objectives of this study were to perform a phylogenetic analysis of Trichosporon spp. clinical isolates. We also evalu...

  • Article
  • Open Access
7 Citations
2,155 Views
12 Pages

26 March 2025

Salt stress poses a major threat to plant growth, and breeding for salt-tolerant varieties is not always successful to ameliorate this threat. In the present experiment, the effect of T. asperellum 22043 inoculation on the growth of salt-stressed tom...

  • Article
  • Open Access
2 Citations
1,440 Views
19 Pages

Pomegranate Woody Mycobiota Associated with Wood Decay

  • Valentino Bergamaschi,
  • Maria Teresa Valente and
  • Rosario Muleo

26 March 2025

The rapid expansion of pomegranate (Punica granatum L.) cultivation in central and southern Italy has revealed emerging phytosanitary challenges, including “pomegranate wood decay syndrome”, characterised by cortical cankers, wood brownin...

  • Review
  • Open Access
10 Citations
4,491 Views
24 Pages

Aspergillus fumigatus in the Food Production Chain and Azole Resistance: A Growing Concern for Consumers

  • Katherin Castro-Ríos,
  • Maria Clara Shiroma Buri,
  • Arla Daniela Ramalho da Cruz and
  • Paulo Cezar Ceresini

26 March 2025

Aspergillosis is a fungal disease caused by the inhalation of Aspergillus spores, with Aspergillus fumigatus being the primary causative agent. This thermotolerant fungus affects both immunocompetent and immunocompromised individuals, posing a signif...

  • Article
  • Open Access
1,232 Views
16 Pages

Mating-Type Analysis in Diaporthe Isolates from Soybean in Central Europe

  • Behnoush Hosseini,
  • Lena Sophia Käfer and
  • Tobias Immanuel Link

25 March 2025

Species of the genus Diaporthe have a mating-type system with the two mating types MAT1-1 and MAT1-2, like other ascomycetes. They can either be heterothallic, which means that any isolate only possesses one of the two mating types and needs a mating...

  • Article
  • Open Access
1 Citations
1,534 Views
25 Pages

25 March 2025

Xylanases are crucial for the breakdown of hemicellulose, enabling the conversion of lignocellulosic biomass into fermentable sugars for biofuels and other industrial applications. For the first time, we investigated the biochemical and genetic chara...

  • Brief Report
  • Open Access
2 Citations
4,573 Views
9 Pages

A Barcoded ITS Primer-Based Nanopore Sequencing Protocol for Detection of Alternaria Species and Other Fungal Pathogens in Diverse Plant Hosts

  • Vladimer Baramidze,
  • Luca Sella,
  • Tamar Japaridze,
  • Nino Dzotsenidze,
  • Daviti Lamazoshvili,
  • Nino Abashidze,
  • Maka Basilidze and
  • Giorgi Tomashvili

25 March 2025

Alternaria is a genus that contains several important plant pathogens affecting nearly 400 plant species worldwide, including economically important crops such as grapes, citrus, and ornamental plants. Rapid, scalable, and efficient methods of pathog...

  • Case Report
  • Open Access
9 Citations
2,357 Views
10 Pages

First Report of Trichophyton indotineae Infection in Hungary

  • Zoltán Tóth,
  • Beatrix Ványai,
  • Renátó Kovács,
  • Ágnes Jakab,
  • Andrea Szegedi,
  • Bence Balázs and
  • László Majoros

25 March 2025

Trichophyton indotineae is associated with difficult-to-treat, often extensive dermatophytosis and resistance to the commonly used antifungal agents. Successful therapy often necessitates higher than usual doses of systemic therapy for prolonged peri...

  • Article
  • Open Access
9 Citations
2,695 Views
14 Pages

Can Metarhizium anisopliae Reduce the Feeding of the Neotropical Brown Stink Bug, Euschistus heros (Fabricius, 1798), and Its Damage to Soybean Seeds?

  • André Cirilo de Sousa Almeida,
  • Mayara Alves Rodrigues,
  • Heloiza Alves Boaventura,
  • Angélica Siqueira Vieira,
  • José Francisco Arruda e Silva,
  • Flávio Gonçalves de Jesus and
  • Eliane Dias Quintela

25 March 2025

The fungus Metarhizium anisopliae is under development as a bioinsecticide for Euschistus heros. To further elucidate the effect of this fungus on E. heros behavior, we monitored the feeding activities of adults treated with the fungus at 1 × 1...

  • Article
  • Open Access
1,809 Views
39 Pages

24 March 2025

The establishment of artificial grassland is a good pathway for resolving serious social and economic problems in the Qinghai–Tibet Plateau. Some beneficial indigenous microbes may be used to improve productivity in artificial grassland. The ge...

  • Article
  • Open Access
2,025 Views
16 Pages

Etiological Agents and Predisposing Factors of Superficial Fungal Infections in Northeastern Argentina

  • Ana Clara Almada,
  • Beda Mereles-Rodríguez,
  • Miriam Chade,
  • Isabel Belinchón-Romero,
  • Enrique-Jorge Deschutter and
  • José-Manuel Ramos-Rincón

23 March 2025

Superficial fungal infections (SFIs) account for approximately 2% of outpatient visits. Individual, environmental, and socioeconomic factors may increase susceptibility. The objective was to identify the etiological agents of SFIs and the predisposin...

  • Article
  • Open Access
1 Citations
1,711 Views
46 Pages

23 March 2025

The MAT1-1-1 and MAT1-2-1 proteins are essential for the sexual reproduction of Ophiocordyceps sinensis. Although Hirsutella sinensis has been postulated to be the sole anamorph of O. sinensis and to undergo self-fertilization under homothallism or p...

  • Article
  • Open Access
1,244 Views
19 Pages

Whole-Genome DNA Methylation Analysis of Inoculation with Trichothecium roseum in Harvested Muskmelons

  • Liang Lyu,
  • Lei Li,
  • Chenglong Zhao,
  • Yuchao Ning,
  • Yawen Luo,
  • Xining He and
  • Mina Nan

22 March 2025

DNA methylation is a crucial epigenetic marker linked to plant defense responses, but its significance in fungal infection of postharvest fruits remains poorly understood. This study indicated that Trichothecium roseum inoculation increased ROS produ...

  • Article
  • Open Access
3 Citations
2,417 Views
21 Pages

Evaluating the Role of Nutrient Competition in Debaryomyces hansenii Biocontrol Activity Against Spoilage Molds in the Meat Industry

  • Helena Chacón-Navarrete,
  • Ignacio García-Álvarez de Toledo,
  • José Ramos and
  • Francisco Javier Ruiz-Castilla

22 March 2025

The rejection of chemical preservatives reflects the growing demand for natural and safe products. This concern has spurred scientific interest in yeasts as biocontrol agents, given their antagonistic activity against undesired fungi, which is one of...

  • Article
  • Open Access
2 Citations
1,240 Views
12 Pages

Novel Epidithiodiketopiperazine Derivatives in the Mutants of the Filamentous Fungus Trichoderma hypoxylon

  • Zedong Ren,
  • Yuanyuan Li,
  • Peng-Lin Wei,
  • Shengquan Zhang,
  • Dong Wang,
  • Jie Fan and
  • Wen-Bing Yin

22 March 2025

Epidithiodiketopiperazines (ETPs) are a class of fungal secondary metabolites (SMs) featuring a transannular disulfide bridge at the diketopiperazine (DKP) core. The complex structures and biological activities have attracted widespread attention fro...

  • Article
  • Open Access
2 Citations
3,903 Views
17 Pages

Proteomic Analysis of the Fusarium graminearum Secretory Proteins in Wheat Apoplast Reveals a Cell-Death-Inducing M43 Peptidase

  • Pengfeng Li,
  • Ruihua Zhao,
  • Ying Fang,
  • Yujin Fan,
  • Qianyong Hu,
  • Wei Huang,
  • Wujun Ma and
  • Cuijun Zhang

21 March 2025

Fusarium graminearum, a highly destructive fungal pathogen, poses a major threat to wheat production. The apoplast is an important space for plant–pathogen interactions. However, no studies have been reported on the secretory proteins of F. gra...

  • Article
  • Open Access
4 Citations
1,724 Views
14 Pages

The TOR Signaling Pathway Governs Fungal Development, Virulence and Ustiloxin Biosynthesis in Ustilaginoidea virens

  • Yuejiao Li,
  • Shuqin Sun,
  • Guangsheng Li,
  • Zezhong Yang,
  • Yuqi Xing,
  • Ruixiang Wang,
  • Yuanhu Xuan and
  • Xiurong Yang

21 March 2025

Ustilaginoidea virens is an economically important plant pathogen that causes rice false smut, which causes yield reduction and produces mycotoxins in infected grains that pose a serious threat to human and animal health. The target of rapamycin (TOR...

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J. Fungi - ISSN 2309-608X