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Microorganisms, Volume 11, Issue 9

2023 September - 240 articles

Cover Story: In our upcoming Special Issue, we unveil the outcomes of an exhaustive literature review, shedding light on the role of distinct gut pathogens in the intricate web of rheumatoid arthritis-related immune dysregulation. These findings not only significantly augment our comprehension of rheumatoid arthritis’s intricate pathogenesis but also bolster the notion that modifying the rheumatoid arthritis-specific gut microbiome, reinstating immune equilibrium, and mitigating inflammatory burdens could potentially usher in a personalized treatment paradigm in the near future. As we delve deeper into the enigma of the gut microbiome and its profound impact on the onset and progression of rheumatoid arthritis, we glimpse a ray of hope for those grappling with this debilitating autoimmune ailment—a promise of enhanced outcomes and an improved quality of life. View this paper
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Articles (240)

  • Review
  • Open Access
18 Citations
4,682 Views
23 Pages

The Prevalence of Metallo-Beta-Lactamese-(MβL)-Producing Pseudomonas aeruginosa Isolates in Brazil: A Systematic Review and Meta-Analysis

  • Pabllo Antonny Silva Dos Santos,
  • Marcos Jessé Abrahão Silva,
  • Maria Isabel Montoril Gouveia,
  • Luana Nepomuceno Gondim Costa Lima,
  • Ana Judith Pires Garcia Quaresma,
  • Patrícia Danielle Lima De Lima,
  • Danielle Murici Brasiliense,
  • Karla Valéria Batista Lima and
  • Yan Corrêa Rodrigues

The purpose of the current study is to describe the prevalence of Pseudomonas aeruginosa (PA)-producing MβL among Brazilian isolates and the frequency of blaSPM-1 in MβL-PA-producing isolates. From January 2009 to August 2023, we carried ou...

(This article belongs to the Special Issue Microorganisms Associated with Infectious Disease 2.0)
  • Article
  • Open Access
1 Citations
3,201 Views
12 Pages

Impact of Protein Aggregates on Sporulation and Germination of Bacillus subtilis

  • Julien Mortier,
  • Alexander Cambré,
  • Sina Schack,
  • Graham Christie and
  • Abram Aertsen

In order to improve our general understanding of protein aggregate (PA) management and impact in bacteria, different model systems and processes need to be investigated. As such, we developed an inducible synthetic PA model system to investigate PA d...

(This article belongs to the Special Issue Assembly, Structure, and Germination of Bacterial Spores)
  • Article
  • Open Access
16 Citations
3,721 Views
15 Pages

As a gymnosperm group, cycads are known for their ancient origin and specialized coralloid root, which can be used as an ideal system to explore the interaction between host and associated microorganisms. Previous studies have revealed that some nitr...

(This article belongs to the Special Issue Plant-Microbe Interaction State-of-the-Art Research in China)
  • Review
  • Open Access
23 Citations
3,968 Views
20 Pages

Gut Microbiota in Diagnosis, Therapy and Prognosis of Cholangiocarcinoma and Gallbladder Carcinoma—A Scoping Review

  • Ann-Kathrin Lederer,
  • Hannah Rasel,
  • Eva Kohnert,
  • Clemens Kreutz,
  • Roman Huber,
  • Mohamed Tarek Badr,
  • Patricia K. E. Dellweg,
  • Fabian Bartsch and
  • Hauke Lang

Cancers of the biliary tract are more common in Asia than in Europe, but are highly lethal due to delayed diagnosis and aggressive tumor biology. Since the biliary tract is in direct contact with the gut via the enterohepatic circulation, this sugges...

(This article belongs to the Special Issue Latest Review Papers in Gut Microbiota 2023)
  • Article
  • Open Access
9 Citations
2,728 Views
17 Pages

Transcriptome and Metabolome Analyses of Thitarodes xiaojinensis in Response to Ophiocordyceps sinensis Infection

  • Miaomiao Li,
  • Jihong Zhang,
  • Qilian Qin,
  • Huan Zhang,
  • Xuan Li,
  • Hongtuo Wang and
  • Qian Meng

Ophiocordyceps sinensis exhibits more than 5 months of vegetative growth in Thitarodes xiaojinensis hemocoel. The peculiar development process of O. sinensis has been elucidated through morphological observation and omics technology; however, little...

(This article belongs to the Special Issue Fungal Biology and Interactions)
  • Review
  • Open Access
49 Citations
16,911 Views
13 Pages

Kocuria Species Infections in Humans—A Narrative Review

  • Afroditi Ziogou,
  • Ilias Giannakodimos,
  • Alexios Giannakodimos,
  • Stella Baliou and
  • Petros Ioannou

Kocuria species are catalase-positive and coagulase-negative Gram-positive coccoid bacteria that belong to the family Micrococcaceae, order Actinomycetales, and class Actinobacteria. Even though they may be relatively rare, they have been increasingl...

(This article belongs to the Special Issue New Trends in Medical Bacteriology: Diagnosis, Treatment and Prevention)
  • Communication
  • Open Access
8 Citations
3,000 Views
10 Pages

Plasma Bacterial DNA Load as a Potential Biomarker for the Early Detection of Colorectal Cancer: A Case–Control Study

  • Robertina Giacconi,
  • Rossella Donghia,
  • Graziana Arborea,
  • Maria Teresa Savino,
  • Mauro Provinciali,
  • Fabrizia Lattanzio,
  • Giusy Rita Caponio,
  • Sergio Coletta,
  • Antonia Bianco and
  • Pasqua Letizia Pesole
  • + 5 authors

The gut microbiota has gained increasing attention in recent years due to its significant impact on colorectal cancer (CRC) development and progression. The recent detection of bacterial DNA load in plasma holds promise as a potential non-invasive ap...

(This article belongs to the Special Issue Gut Microbiota, Diet, and Gastrointestinal Cancer)
  • Article
  • Open Access
6 Citations
4,218 Views
13 Pages

A Comparative Analysis of the Stomach, Gut, and Lung Microbiomes in Rattus norvegicus

  • Taif Shah,
  • Yuhan Wang,
  • Yixuan Wang,
  • Qian Li,
  • Jiuxuan Zhou,
  • Yutong Hou,
  • Binghui Wang and
  • Xueshan Xia

Urban rats serve as reservoirs for several zoonotic pathogens that seriously endanger public health, destroy stored food, and damage infrastructure due to their close interaction with humans and domestic animals. Here, we characterize the core microb...

(This article belongs to the Special Issue Gut Microbiome in Homeostasis and Disease)
  • Review
  • Open Access
152 Citations
17,173 Views
16 Pages

The Role of Fusobacterium nucleatum in Oral and Colorectal Carcinogenesis

  • Pamela Pignatelli,
  • Federica Nuccio,
  • Adriano Piattelli and
  • Maria Cristina Curia

In recent years, several studies have suggested a strong association of microorganisms with several human cancers. Two periodontopathogenic species in particular have been mentioned frequently: Fusobacterium nucleatum (F. nucleatum) and Porphyromonas...

(This article belongs to the Special Issue Oncogenic Role of Viruses and Bacteria)
  • Article
  • Open Access
8 Citations
4,065 Views
10 Pages

Bacteremia in Patients with Sepsis in the ICU: Does It Make a Difference?

  • Tomáš Nejtek,
  • Martin Müller,
  • Michal Moravec,
  • Miroslav Průcha and
  • Roman Zazula

Sepsis (and septic shock) is on of the most common causes of death worldwide. Bacteremia often, but not necessarily, occurs in septic patients, but the impact of true bacteremia on a patient’s clinical characteristics and outcome remains unclea...

(This article belongs to the Special Issue Bacterial Pathogens Associated with Bacteremia)
  • Article
  • Open Access
1,962 Views
16 Pages

The broad range of clinical manifestations and life-threatening infections caused by the Gram-positive bacterium, Streptococcus pyogenes or Group A Streptococcus (GAS), remains a significant concern to public health, with a subset of individuals deve...

(This article belongs to the Special Issue Group A Streptococcus: Infection, Immunity and Vaccine Development)
  • Review
  • Open Access
17 Citations
10,470 Views
42 Pages

Emerging and Novel Viruses in Passerine Birds

  • Richard A. J. Williams,
  • Christian J. Sánchez-Llatas,
  • Ana Doménech,
  • Ricardo Madrid,
  • Sergio Fandiño,
  • Pablo Cea-Callejo,
  • Esperanza Gomez-Lucia and
  • Laura Benítez

There is growing interest in emerging viruses that can cause serious or lethal disease in humans and animals. The proliferation of cloacal virome studies, mainly focused on poultry and other domestic birds, reveals a wide variety of viruses, although...

(This article belongs to the Special Issue Avian Pathogens 2.0)
  • Article
  • Open Access
7 Citations
3,451 Views
16 Pages

A Whole-Genome Sequencing-Based Approach for the Characterization of Klebsiella pneumoniae Co-Producing KPC and OXA-48-like Carbapenemases Circulating in Sardinia, Italy

  • Arcadia Del Rio,
  • Valeria Fox,
  • Narcisa Muresu,
  • Illari Sechi,
  • Andrea Cossu,
  • Alessandra Palmieri,
  • Rossana Scutari,
  • Claudia Alteri,
  • Giovanni Sotgiu and
  • Andrea Piana
  • + 1 author

Background: Whole-genome sequencing (WGS) provides important information for the characterization, surveillance, and monitoring of antimicrobial resistance (AMR) determinants, particularly in cases of multi- and extensively drug-resistant microorgani...

(This article belongs to the Special Issue 10th Anniversary of Microorganisms: Past, Present and Future)
  • Article
  • Open Access
5 Citations
3,313 Views
19 Pages

Impact of Sleeve Gastrectomy on Fecal Microbiota in Individuals with Morbid Obesity

  • Danyta I. Tedjo,
  • Jennifer A. Wilbrink,
  • Jos Boekhorst,
  • Harro M. Timmerman,
  • Simon W. Nienhuijs,
  • Arnold Stronkhorst,
  • Paul H. M. Savelkoul,
  • Ad A. M. Masclee,
  • John Penders and
  • Daisy M. A. E. Jonkers

Background: The intestinal microbiota plays an important role in the etiology of obesity. Sleeve gastrectomy (SG) is a frequently performed and effective therapy for morbid obesity. Objective: To investigate the effect of sleeve gastrectomy on the fe...

(This article belongs to the Special Issue Gut Microbiota: Health, Clinical & Beyonds)
  • Article
  • Open Access
11 Citations
4,243 Views
14 Pages

Response Surface Methodology Application for Bacteriophage–Antibiotic Antibiofilm Activity Optimization

  • Bartłomiej Grygorcewicz,
  • Marta Gliźniewicz,
  • Patrycja Olszewska,
  • Dominika Miłek,
  • Artur Czajkowski,
  • Natalia Serwin,
  • Elżbieta Cecerska-Heryć and
  • Rafał Rakoczy

Phage–antibiotic combination-based protocols are presently under heightened investigation. This paradigm extends to engagements with bacterial biofilms, necessitating novel computational approaches to comprehensively characterize and optimize t...

  • Article
  • Open Access
3 Citations
2,732 Views
15 Pages

The spread of nosocomial infections caused by antibiotic-resistant Enterococcus faecalis is one of the major threats to global health at present. While aminoglycosides are often used to combat these infections, their effectiveness is reduced by vario...

(This article belongs to the Special Issue Advances in Antibiotic and Antifungal Resistance and Related Alternative Therapies)
  • Article
  • Open Access
3 Citations
1,846 Views
12 Pages

An experimental study by the Paul-Ehrlich Institute (PEI) demonstrated that temperatures between 35 and 37 °C are too high for the growth of some bacterial strains (e.g., Pseudomonas fluorescens), leading to false negative results. Thus, the ques...

(This article belongs to the Special Issue Safety of Platelet Components: Past, Present and Future)
  • Article
  • Open Access
11 Citations
4,634 Views
20 Pages

Microbiome Diversity of Anaerobic Digesters Is Enhanced by Microaeration and Low Frequency Sound

  • John H. Loughrin,
  • Rohan R. Parekh,
  • Getahun E. Agga,
  • Philip J. Silva and
  • Karamat R. Sistani

Biogas is produced by a consortium of bacteria and archaea. We studied how the microbiome of poultry litter digestate was affected by time and treatments that enhanced biogas production. The microbiome was analyzed at six, 23, and 42 weeks of incubat...

(This article belongs to the Special Issue Microorganisms in Biomass Conversion and Biofuel Production)
  • Article
  • Open Access
10 Citations
3,338 Views
11 Pages

Detection of Fungal Diseases in Lettuce by VIR-NIR Spectroscopy in Aquaponics

  • Ivaylo Sirakov,
  • Katya Velichkova,
  • Toncho Dinev,
  • Desislava Slavcheva-Sirakova,
  • Elica Valkova,
  • Dimitar Yorgov,
  • Petya Veleva,
  • Vasil Atanasov and
  • Stefka Atanassova

One of the main challenges facing the development of aquaponics is disease control, due on one hand to the fact that plants cannot be treated with chemicals because they can lead to mortality in cultured fish. The aim of this study was to apply the v...

(This article belongs to the Section Veterinary Microbiology)
  • Article
  • Open Access
1 Citations
2,464 Views
15 Pages

Humoral Immune Responses in Patients with Severe COVID-19: A Comparative Pilot Study between Individuals Infected by SARS-CoV-2 during the Wild-Type and the Delta Periods

  • Maria Sukhova,
  • Maria Byazrova,
  • Artem Mikhailov,
  • Gaukhar Yusubalieva,
  • Irina Maslova,
  • Tatyana Belovezhets,
  • Nikolay Chikaev,
  • Ivan Vorobiev,
  • Vladimir Baklaushev and
  • Alexander Filatov

Since the onset of the COVID-19 pandemic, humanity has experienced the spread and circulation of several SARS-CoV-2 variants that differed in transmissibility, contagiousness, and the ability to escape from vaccine-induced neutralizing antibodies. Ho...

(This article belongs to the Special Issue Coronaviruses: Past, Present, and Future)
  • Article
  • Open Access
7 Citations
2,794 Views
12 Pages

Safety Analysis of Extended Platelet Shelf-Life with Large-Volume Delayed Sampling on BACT/ALERT® VIRTUO® in Australia

  • Anthea Cheng,
  • Anindita Das,
  • Khin Chaw,
  • Peta M. Dennington,
  • Claire E. Styles and
  • Iain B. Gosbell

Transfusion-transmitted bacterial infection (TTBI) is the leading cause of transfusion-transmitted infections. Platelet components are more likely to be associated with bacterial contamination due to their storage requirements. Australian Red Cross L...

(This article belongs to the Special Issue Safety of Platelet Components: Past, Present and Future)
  • Article
  • Open Access
9 Citations
4,189 Views
15 Pages

Recently, applied technology in the form of the combination of a probiotics and a digital poultry system, with the convergence of Information and Communications Technology and farm animals, has enabled a new strategy to overcome the livestock product...

(This article belongs to the Section Veterinary Microbiology)
  • Article
  • Open Access
12 Citations
3,076 Views
16 Pages

Identification, Antioxidant Capacity, and Matrix Metallopeptidase 9 (MMP-9) In Silico Inhibition of Haloarchaeal Carotenoids from Natronococcus sp. and Halorubrum tebenquichense

  • Mariana Delgado-Garcia,
  • Osvaldo Gómez-Secundino,
  • Jorge A. Rodríguez,
  • Juan Carlos Mateos-Díaz,
  • Marcelo Muller-Santos,
  • Cristobal N. Aguilar and
  • Rosa Maria Camacho-Ruiz

Natural pigments from haloarchaea are of great interest; bacterioruberin is the major pigment, it shows higher antioxidant power when compared with β-carotene. However, characterization of bacterioruberin and its isomers along with its antioxida...

(This article belongs to the Special Issue New Insights into the Diversity and Characterization of Extremophiles)
  • Article
  • Open Access
26 Citations
7,548 Views
15 Pages

Effect of Growth Stages and Lactic Acid Fermentation on Anti-Nutrients and Nutritional Attributes of Spinach (Spinacia oleracea)

  • Adila Naseem,
  • Saeed Akhtar,
  • Tariq Ismail,
  • Muhammad Qamar,
  • Dur-e-shahwar Sattar,
  • Wisha Saeed,
  • Tuba Esatbeyoglu,
  • Elena Bartkiene and
  • João Miguel Rocha

Spinach (Spinacia oleracea) is a winter-season green, leafy vegetable grown all over the world, belonging to the family Amaranthus, sub-family Chenopodiaceae. Spinach is a low-caloric food and an enormous source of micronutrients, e.g., calcium, fola...

(This article belongs to the Special Issue Screening and Characterization of the Diversity of Food Microorganisms and Their Metabolites 2022)
  • Brief Report
  • Open Access
4 Citations
2,375 Views
11 Pages

Increased Expression of lncRNA AC000120.7 and SENP3-EIF4A1 in Patients with Acute Respiratory Distress Syndrome Induced by SARS-CoV-2 Infection: A Pilot Study

  • Javier González-Ramírez,
  • Ana Gabriela Leija-Montoya,
  • Nicolás Serafín-Higuera,
  • Carlos A. Guzmán-Martín,
  • Luis M. Amezcua-Guerra,
  • Carlos Olvera-Sandoval,
  • Jesús René Machado-Contreras,
  • Armando Ruiz-Hernández,
  • Adrián Hernández-Díazcouder and
  • Fausto Sánchez-Muñoz
  • + 1 author

COVID-19, a disease caused by the SARS-CoV-2 virus, poses significant threats to the respiratory system and other vital organs. Long non-coding RNAs have emerged as influential epigenetic regulators and promising biomarkers in respiratory ailments. T...

(This article belongs to the Special Issue Coronaviruses: Past, Present, and Future)
  • Article
  • Open Access
30 Citations
4,177 Views
18 Pages

Myco-Synthesized Selenium Nanoparticles as Wound Healing and Antibacterial Agent: An In Vitro and In Vivo Investigation

  • Heba El-Sayed,
  • Mostafa Y. Morad,
  • Hana Sonbol,
  • Olfat A. Hammam,
  • Rehab M. Abd El-Hameed,
  • Rania A. Ellethy,
  • Amina M. Ibrahim and
  • Marwa A. Hamada

Bacterial-associated wound infections are an obstacle for individuals and the medical industry. Developing versatile, antibiotic-free therapies helps heal wounds more quickly and efficiently. In the current study, fungal metabolites were employed as...

(This article belongs to the Section Antimicrobial Agents and Resistance)
  • Protocol
  • Open Access
2 Citations
4,105 Views
9 Pages

A Method for Rapid Polyethyleneimine-Based Purification of Bacteriophage-Expressed Proteins from Diluted Crude Lysates, Exemplified by Thermostable TP-84 Depolymerase

  • Beata Łubkowska,
  • Edyta Czajkowska,
  • Ireneusz Sobolewski,
  • Natalia Krawczun,
  • Agnieszka Żylicz-Stachula and
  • Piotr M. Skowron

Purification of bacteriophage-expressed proteins poses methodological difficulties associated with the need to process entire culture medium volume upon bacteriophage-induced bacterial cell lysis. We have used novel capsule glycosylase-depolymerase (...

(This article belongs to the Section Environmental Microbiology)
  • Communication
  • Open Access
7 Citations
2,543 Views
10 Pages

Trichinella spp. are etiological zoonotic agents spread throughout the world and affect mammals, birds, and reptiles; they evolve via two cycles: domestic and sylvatic. Martes martes is a carnivorous nocturnal mammal from the family Mustelidae. In Ro...

(This article belongs to the Section Parasitology)
  • Article
  • Open Access
5 Citations
3,965 Views
11 Pages

Giardia duodenalis is a waterborne zoonotic protozoan that causes gastrointestinal tract inflammation in humans, cattle, and other animals. The aim of the present study was to estimate the prevalence and potential risk factors for Giardia infection i...

(This article belongs to the Section Public Health Microbiology)
  • Article
  • Open Access
3 Citations
3,157 Views
15 Pages

Molecular Evolutionary Analyses of the Spike Protein Gene and Spike Protein in the SARS-CoV-2 Omicron Subvariants

  • Norika Nagasawa,
  • Ryusuke Kimura,
  • Mao Akagawa,
  • Tatsuya Shirai,
  • Mitsuru Sada,
  • Kaori Okayama,
  • Yuka Sato-Fujimoto,
  • Makoto Saito,
  • Mayumi Kondo and
  • Hirokazu Kimura
  • + 3 authors

To better understand the evolution of the SARS-CoV-2 Omicron subvariants, we performed molecular evolutionary analyses of the spike (S) protein gene/S protein using advanced bioinformatics technologies. First, time-scaled phylogenetic analysis estima...

(This article belongs to the Special Issue Molecular Epidemiology, Diagnostics and Management of Respiratory Virus Infections (2nd Edition))
  • Article
  • Open Access
13 Citations
3,431 Views
23 Pages

Characterization of Microbial Diversity of Two Tomato Cultivars through Targeted Next-Generation Sequencing 16S rRNA and ITS Techniques

  • Rukayat Abiola Abdulsalam,
  • Oluwatosin Ademola Ijabadeniyi,
  • Errol D. Cason and
  • Saheed Sabiu

Even though the nutritional and economic values of Solanum lycopersicum (tomato) are substantially impacted by microbial spoilage, the available data on its microbial community, particularly during spoilage, are limited and have primarily been charac...

(This article belongs to the Special Issue Food Microorganisms and Genomics)
  • Article
  • Open Access
2,025 Views
16 Pages

The Mating Type (MAT) and Virulence of Sporothrix schenckii sensu stricto Isolates Maintained in Culture Collection

  • Thais Barreira,
  • Danielly Corrêa-Moreira,
  • Cintia de Moraes Borba,
  • Rodrigo Caldas Menezes,
  • Aurea Maria Lage de Moraes and
  • Manoel Marques Evangelista Oliveira

In an attempt to determine the mating type of different Sporothrix schenckii sensu stricto isolates that remained viable after a long period of preservation in a culture collection and to correlate them with the degree of virulence/pathogenicity, a P...

(This article belongs to the Special Issue 10th Anniversary of Microorganisms: Past, Present and Future)
  • Article
  • Open Access
14 Citations
3,045 Views
17 Pages

The non-tuberculous mycobacterium (NTM) is a very troublesome opportunistic pathogen, placing a heavy burden on public health. The pathogenesis of NTM pulmonary infection is not well-revealed yet, and its diagnosis is always challenging. This study a...

(This article belongs to the Section Medical Microbiology)
  • Article
  • Open Access
6 Citations
2,525 Views
11 Pages

Vibrio splendidus is a pathogen that infects a wide range of hosts, especially the sea cucumber species Apostichopus japonicus. Previous studies showed that the level of L-glutamic acid (L-Glu) significantly increased under heat stress, and it was fo...

(This article belongs to the Special Issue Immunotoxic Factors Promoting Infectious Diseases in Cultured Marine Animals)
  • Article
  • Open Access
15 Citations
3,418 Views
15 Pages

Background: Some fungal endophytes isolated from P. ginseng may present a new method of obtaining saponins. This experiment aimed to optimize the total saponin yield produced through in vitro fermentation by an endophytic fungus and analyze its sapon...

(This article belongs to the Special Issue Endophytic Fungi and Their Role in Achieving the UN Sustainable Development Goals)
  • Article
  • Open Access
14 Citations
4,123 Views
13 Pages

Cyanobacteria can exist in water resources and produce odorants. 2-Methylisoborneol (2-MIB) and geosmin are the main odorant compounds affecting the drinking water quality in reservoirs. In this study, encoding genes 2-MIB (mic, monoterpene cyclase)...

(This article belongs to the Section Environmental Microbiology)
  • Article
  • Open Access
10 Citations
4,036 Views
18 Pages

Acid stress poses a common challenge for bacteria in diverse environments by the presence of inorganic (e.g., mammals’ stomach) or organic acids (e.g., feed additives; acid-based disinfectants). Limited knowledge exists regarding acid-tolerant...

(This article belongs to the Section Molecular Microbiology and Immunology)
  • Article
  • Open Access
5 Citations
3,739 Views
17 Pages

The Deciphering of Growth-Dependent Strategies for Quorum-Sensing Networks in Pseudomonas aeruginosa

  • Tereza Juříková,
  • Hynek Mácha,
  • Vanda Lupjanová,
  • Tomáš Pluháček,
  • Helena Marešová,
  • Barbora Papoušková,
  • Dominika Luptáková,
  • Rutuja H. Patil,
  • Oldřich Benada and
  • Andrea Palyzová
  • + 1 author

Pseudomonas aeruginosa is recognized as a significant cause of morbidity and mortality among nosocomial pathogens. In respiratory infections, P. aeruginosa acts not only as a single player but also collaborates with the opportunistic fungal pathogen...

(This article belongs to the Section Molecular Microbiology and Immunology)
  • Article
  • Open Access
6 Citations
2,920 Views
14 Pages

Metagenomic Analysis of a Continuous-Flow Aerobic Granulation System for Wastewater Treatment

  • Alison T. Gomeiz,
  • Yewei Sun,
  • Aaron Newborn,
  • Zhi-Wu Wang,
  • Bob Angelotti and
  • Benoit Van Aken

Aerobic granulation is an emerging process in wastewater treatment that has the potential to accelerate sedimentation of the microbial biomass during secondary treatment. Aerobic granulation has been difficult to achieve in the continuous flow reacto...

(This article belongs to the Special Issue Microbial Ecosystems in Water and Wastewater Treatment)
  • Article
  • Open Access
15 Citations
3,526 Views
16 Pages

The ability of microorganisms to promote plant growth and mitigate abiotic and biotic stresses makes them an interesting tool for sustainable agriculture. Numerous studies aim to identify new, promising bacteria isolates. Traditional culture-based me...

(This article belongs to the Special Issue Endophytes for Managing Biotic and Abiotic Stress in Plants, 2nd Edition)
  • Communication
  • Open Access
7 Citations
2,224 Views
8 Pages

Diagnosis and Outcomes of Fungal Co-Infections in COVID-19 Infections: A Retrospective Study

  • Richard Swaney,
  • Rutendo Jokomo-Nyakabau,
  • Anny A. N. Nguyen,
  • Dorothy Kenny,
  • Paul G. Millner,
  • Mohammad Selim,
  • Christopher J. Destache and
  • Manasa Velagapudi

The SARS-CoV-2 pandemic has resulted in a public health emergency with unique complications such as the development of fungal co-infections. The diagnosis of fungal infections can be challenging due to confounding imaging studies and difficulty obtai...

(This article belongs to the Special Issue Coronaviruses: Past, Present, and Future)
  • Article
  • Open Access
8 Citations
2,593 Views
17 Pages

A search for the microorganisms responsible for the anaerobic degradation of osmoprotectants in soda lakes resulted in the isolation of a novel halophilic and alkalitolerant strain, designated Z-7514T. The cells were Gram-stain-negative and non-endos...

(This article belongs to the Section Environmental Microbiology)
  • Article
  • Open Access
2 Citations
2,853 Views
19 Pages

Achieving Discharge Limits in Single-Stage Domestic Wastewater Treatment by Combining Urban Waste Sources and Phototrophic Mixed Cultures

  • Sandra Chacon-Aparicio,
  • John Alexander Villamil,
  • Fernando Martinez,
  • Juan Antonio Melero,
  • Raul Molina and
  • Daniel Puyol

This work shows the potential of a new way of co-treatment of domestic wastewater (DWW) and a liquid stream coming from the thermal hydrolysis of the organic fraction of municipal solid waste (OFMSW) mediated by a mixed culture of purple phototrophic...

(This article belongs to the Special Issue Photosynthetic Microorganisms: Culturing and Biotechnological Applications)
  • Review
  • Open Access
31 Citations
14,828 Views
17 Pages

The Gut-Wrenching Effects of Cryptosporidiosis and Giardiasis in Children

  • Mayuri Prabakaran,
  • Lyssa J. Weible,
  • Joshua D. Champlain,
  • Ryan Ye Jiang,
  • Katalina Biondi,
  • Ana A. Weil,
  • Wesley C. Van Voorhis and
  • Kayode K. Ojo

Cryptosporidium species and Giardia duodenalis are infectious intestinal protozoan pathogens that cause alarming rates of morbidity and mortality worldwide. Children are more likely to have clinical symptoms due to their less developed immune systems...

(This article belongs to the Special Issue Gut Microbiome and Children’s Health)
  • Article
  • Open Access
2 Citations
2,150 Views
13 Pages

Food processing wastes (FPWs) are residues generated in food manufacturing, and their composition varies depending on the type of food product being manufactured. Therefore, selecting and acclimatizing seed microflora during the initiation of biogas...

(This article belongs to the Section Microbial Biotechnology)
  • Article
  • Open Access
12 Citations
3,339 Views
15 Pages

The Brucella Effector Protein BspF Regulates Apoptosis through the Crotonylation of p53

  • Ruiqi Lin,
  • Ang Li,
  • Yuzhuo Li,
  • Ruitong Shen,
  • Fangyuan Du,
  • Min Zheng,
  • Jinying Zhu,
  • Jingjing Chen,
  • Pengfei Jiang and
  • Zeliang Chen
  • + 3 authors

The Brucella type IV secretion system (T4SS) can promote the intracellular survival and reproduction of Brucella. T4SS secretes effector proteins to act on cellular signaling pathways to inhibit the host’s innate immune response and cause a chr...

(This article belongs to the Section Molecular Microbiology and Immunology)
  • Article
  • Open Access
13 Citations
3,992 Views
13 Pages

Genetic Insights into Intestinal Microbiota and Risk of Infertility: A Mendelian Randomization Study

  • Fuxun Zhang,
  • Yang Xiong,
  • Kan Wu,
  • Linmeng Wang,
  • Yunhua Ji and
  • Bo Zhang

Background: The interaction between intestinal microbiota and infertility is less researched. This study was performed to investigate the causal association between gut microbiota and infertility. Methods: In this two-sample Mendelian randomization (...

(This article belongs to the Section Gut Microbiota)
  • Article
  • Open Access
15 Citations
3,380 Views
19 Pages

Cassava Foliage Effects on Antioxidant Capacity, Growth, Immunity, and Ruminal Microbial Metabolism in Hainan Black Goats

  • Mao Li,
  • Xuejuan Zi,
  • Renlong Lv,
  • Lidong Zhang,
  • Wenjun Ou,
  • Songbi Chen,
  • Guanyu Hou and
  • Hanlin Zhou

Cassava (Manihot esculenta Crantz) foliage is a byproduct of cassava production characterized by high biomass and nutrient content. In this study, we investigated the effects of cassava foliage on antioxidant capacity, growth performance, and immunit...

(This article belongs to the Special Issue Gastrointestinal Microbiome in Animals)
  • Review
  • Open Access
4 Citations
3,662 Views
26 Pages

Host-Derived Extracellular Vesicles in Blood and Tissue Human Protozoan Infections

  • Natalia Tiberti,
  • Silvia Stefania Longoni,
  • Valéry Combes and
  • Chiara Piubelli

Blood and tissue protozoan infections are responsible for an enormous burden in tropical and subtropical regions, even though they can also affect people living in high-income countries, mainly as a consequence of migration and travel. These patholog...

(This article belongs to the Section Parasitology)
  • Article
  • Open Access
24 Citations
3,884 Views
13 Pages

Endophytic Seed-Associated Bacteria as Plant Growth Promoters of Cuban Rice (Oryza sativa L.)

  • Ionel Hernández,
  • Cecilia Taulé,
  • Reneé Pérez-Pérez,
  • Federico Battistoni,
  • Elena Fabiano,
  • Angela Villanueva-Guerrero,
  • María Caridad Nápoles and
  • Héctor Herrera

Cuban rice cultivars INCA LP-5 and INCA LP-7 are widely distributed in Cuba and Caribbean countries. Although there are studies about rhizospheric bacteria associated with these cultivars, there are no reports about their seed-associated bacteria. Th...

(This article belongs to the Special Issue The Hidden World within Plants 2.0)

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Microorganisms - ISSN 2076-2607