Editor’s Choice Articles

Seed germination is the initial step in a plant’s life cycle; it is precisely regulated by many factors at the molecular and biological levels. Reversible protein phosphorylation, which is regulated by protein kinases and protein phosphatases, plays a key role in hormone signal transduction, energy metabolism, stress response, and plant growth and development, including seed germination. This review provides a comprehensive elucidation of the coordinated regulatory mechanisms mediated by kinases and phosphatases during seed germination, with particular emphasis on their dynamic interplay and reciprocal modulation within biological signaling networks. Through the systematic integration of current research findings, we mechanistically dissect the sophisticated phosphorylation–dephosphorylation circuitry that governs metabolic activation, hormonal signaling transduction, and cellular homeostasis in germinating seeds. Furthermore, we propose a novel conceptual framework that delineates the spatiotemporal cooperation between these opposing enzymatic activities in regulating dormancy release and developmental transitions. The current challenges in the field of seed germination research are critically examined, and potential future investigative trajectories are outlined, aiming to establish a robust theoretical framework for elucidating the molecular mechanisms underlying seed dormancy regulation, as well as translating these findings into innovative agricultural production practices. Full article

Seed microbes play crucial roles in plant health, but studying their diversity is challenging due to host DNA contamination. This study aimed to optimise methodologies for investigating seed microbiomes across diverse plant species, focusing on the efficacy of peptide nucleic acid (PNA) clamps to reduce host DNA amplification. We tested PNA clamps on three plant species: Melaleuca quinquenervia (tree), Microlaena stipoides, and Themeda triandra (grasses). The effectiveness of PNA clamps was assessed through in silico analysis, axenic tissue culture, and metabarcoding techniques. In silico analysis confirmed the specificity of PNA clamps to the 16S rRNA gene V4 region of chloroplasts in the grass species. Axenic tissue culture experiments showed that applying PNA clamps at both 1 µM and 0.25 µM concentrations significantly reduced plant DNA amplification. Metabarcoding analyses further confirmed that PNA clamps effectively suppressed host DNA, enhancing microbial diversity estimates across all three species while preserving core microbial taxa. The efficacy of the clamps varied among host species, with T. triandra exhibiting the highest blocking efficacy, and chloroplast clamps outperforming mitochondrial ones. This study demonstrates that PNA clamps are a useful for improving seed endophyte metabarcoding datasets, although they require optimisation for some plant species. This knowledge will contribute to enhancing our understanding of seed microbiome diversity and its ecological implications. Full article

Solid-state ¹³C NMR spectroscopy using cross-polarization magic-angle spinning is a highly valuable technique for the semi-quantitative analysis of complex solid matrices. One of its key advantages is that it does not require any manipulation of the matrix, such as extractions or other treatments, which is particularly important for preserving the integrity of unstable secondary metabolites. Glucosinolates (β-thioglucoside-N-hydrosulphates) are crucial secondary metabolites specific to Brassica species, and many of them are known to be highly unstable. In this study, we evaluated solid-state nuclear magnetic resonance spectroscopy as an alternative method for the identification and quantification of total glucosinolates in the seeds of Sisymbrium officinale, Brassica napus, Sinapis alba, Brassica nigra, and Moringa oleifera. The results obtained with this method showed good agreement with those from conventional chemical analyses of the seed material. Although, based on a limited number of samples, this preliminary study suggests that the proposed approach could be a useful alternative for quantifying total glucosinolate content in seeds. Full article

Seed germination is a crucial phase where a plant embryo transitions from dormancy to active growth, emerging as a seedling. This intricate process is highly susceptible to environmental cues, particularly abiotic stress factors including drought, salinity, and temperature extremes, which can profoundly influence both germination success and subsequent plant development. Among the various cellular components that modulate plant responses to these stresses, Rho of Plants (ROP) emerges as a pivotal regulator. Under abiotic stress, ROP signaling components integrate with the core abscisic acid (ABA) signaling pathway by regulating gene transcription and protein stability, modulating subcellular localization, converting protein activity, and engaging in competitive interactions. This review summarizes recent findings on roles of ROP signaling in regulating plant adaptive responses to abiotic stress, whilst explores potential involvement of ROPs in seed germination. This review summarizes the effects of ROP proteins and their effectors, such as GEF, on the seed germination process. It preliminarily elucidates the crosstalk mechanisms between these proteins and the ABA signaling pathway, thereby gaining a deeper understanding of the role of ROP signaling in regulating plant adaptive responses to abiotic stresses. Full article

Populus alba clone ‘Villafranca’ (white poplar), highly suitable for biomass production and ecosystem restoration, is a model system for molecular and physiological studies, but no reports are available concerning seed quality. Although clonal propagation is the preferred approach for commercial purposes, attention should be given to face genetic variability losses in the existing germplasm. To address this challenge, new populations should be developed starting from seeds, overcoming the issues of low germinability and viability during storage. This study proposes to develop tailored treatments to improve the germination of long-term stored white poplar seeds. Priming and soaking protocols, based on the use of water or spermidine (Spd, 50 and 100 μM), were tested. Treatment efficacy was assessed based on germination parameters, reactive oxygen species (ROS) profiles, and the expression patterns of genes with key roles in early seed germination. Soaking with 100 μM Spd for 4 h significantly enhanced germination percentage and speed. Low ROS levels were evidenced in the Spd-treated seeds, compared to water-soaked seeds. High expression of genes involved in desiccation tolerance acquisition, polyamine biosynthesis, and antioxidant defense was observed only in dry seeds. The results are discussed in view of the potential protective role of Spd. Full article

Crops are continually subjected to frequent and extreme changes in climate, such as high temperatures and soil water deficits. Many studies have shown the individual effects of these factors on plants, but their combined effects on reproductive growth and subsequent seed germinability have received little attention. In this study, we used canola (Brassica napus) plants and grew them through their lifecycle under two temperature regimes (20/10 °C and 24/14 °C, 16 h light/8 h dark) in controlled-environment growth chambers. Half of the plants were watered to field capacity (well-watered) and the other half at wilting point (water-stressed). During the reproductive stage, the flower, silique, and seed traits were measured. Higher temperatures decreased the petal width by 1.17 times but increased petal anthocyanins by 1.03 times. The water deficit decreased the silique length and total seed number by 1.21 and 1.32 times, respectively, but increased nectar sugar concentration by 1.28 times. The total volume of nectar was affected by the interaction of temperature and water. The nectar volume was lowest in the water-stressed plants under higher temperatures (2.66 ± 0.29 µL per flower) but highest in the well-watered plants under the same temperature regime (5.73 ± 0.37 µL per flower). In conclusion, the combined effects of temperature and water were less pronounced than the individual effects of these factors on canola reproductive yield. Full article

The taxonomic complexity of Phoenix palms in the Canary Islands, where multiple morphotypes representing at least four taxa currently exist, presents significant challenges for archaeobotanical identification. We developed a Bayesian probabilistic framework to identify archaeological Phoenix seeds within the context of genus-wide morphological diversity. Our analysis incorporated thousands of specimens including modern reference collections, archaeological materials from pre-Hispanic sites in Gran Canaria and La Gomera (3–16th centuries CE), and fossil remains. We recorded quantitative measurements and qualitative characteristics for each specimen. To understand taphonomic effects, we conducted experimental carbonization of modern P. canariensis seeds and documented the resulting morphological alterations. We performed a hierarchical cluster analysis using Ward’s minimum variance method and calculated taxonomic assignment probabilities for archaeological specimens using Bayesian inference, where likelihood was derived from taxon proportions within assigned clusters. The results indicated a high probability (0.69–1.00) that the archaeological specimens belong to P. canariensis var. canariensis, with no evidence for P. dactylifera presence. These findings provide critical insights into pre-Hispanic exploitation of Phoenix palms, particularly the endemic P. canariensis, which served as a vital resource, providing food, fiber, and construction materials. Our methodological approach offers a robust framework for addressing taxonomic uncertainty in archaeobotanical research while enhancing understanding of historical palm biogeography and resource use patterns in the Canary Islands. Full article

Bioactive compounds in plants, such as carrots, have been widely used for their benefits. In agriculture, their potential as biostimulants still needs to be investigated, especially for their possible antioxidant action in plants subjected to abiotic stresses, such as salinity. This work aimed to evaluate the elicitor potential of carrot extract in alleviating salt stress in rice plants. This study aimed to evaluate the elicitor potential of carrot extract in alleviating saline stress in the rice cultivars BRS Querência and BRS 358. Aqueous extracts of carrot roots at concentrations of 0% (water), 25%, 50%, and 100% were used to soak rice seeds for 48 h, which were then subjected to different concentrations of NaCl (0, 25, 75, and 150 mM). To determine the effect of carrot extract as an elicitor under saline stress conditions, the following tests were conducted: germination, seedling length, dry mass, and oxidative stress through the activity of antioxidant enzymes, superoxide dismutase (SOD), ascorbate peroxidase (APX), catalase (CAT), peroxide content, and lipid peroxidation (hydrogen peroxide H₂O₂ and malonaldehyde MDA). Carrot extract increased the germination rate and maintained germination even under increased salinity rates in both cultivars. The application of 25 mM NaCl also boosted germination rates, followed by a significant decrease due to increased salinity rates. Shoot and root lengths and dry mass parameters showed a linear decrease in response to increasing NaCl concentrations. The activities of superoxide dismutase (SOD), ascorbate peroxidase (APx), and catalase (CAT) enzymes tended to decrease as the concentration of carrot extract increased, whereas the opposite was observed with NaCl application. Based on the combined analysis of the evaluated parameters, carrot extract application under the tested conditions was efficient in mitigating oxidative stress caused by high salinity conditions. Full article

Kentucky bluegrass (KBG) has poor seed establishment in the fall when used as a perennial groundcover in corn production. This study was conducted to investigate the effect of various seed treatments and soil amendments on the establishment of KBG under drought and non-drought conditions, simulated in a growth chamber. The effect of seed treatments, soil amendments, and irrigation frequency on KBG germination and shoot dry weight were measured over 21 days in a controlled environment at 21 °C, 50% RH, and exposure to a constant red light. The treatments were the Hydroloc seed treatment, a lime soil amendment, the Pivot Bio seed treatment, an ammonium nitrate soil amendment, a gibberellic acid seed treatment, osmotic seed priming, and an untreated control. The layout was a randomized complete block design, with two irrigation frequencies (restricted and full irrigation) and four replications (blocks). The irrigation treatments were applied to whole plots and the seed treatments were applied to subplots. The entire experiment was repeated four times. Irrigation affected the germination of all the seed treatments, but the size of the effect depended on the seed treatment applied. The control and Hydroloc treatments did not have significantly different dry shoot weights, while all the other treatments had significantly different dry shoot weights when comparing the irrigation regimes. The Hydroloc treatment significantly outperformed all the other treatments in regard to the restricted and full irrigation regime. These results indicate that the Hydroloc seed treatment improves KBG germination and shoot dry weight in drought and non-drought conditions, promoting KBG establishment in a wide range of soil moisture conditions. Full article

The cost of producing organic crops is increasing. Agricultural wastes can be used as biostimulants to increase plant growth and productivity and reduce the dependence on chemical fertilizers. A pouch assay and a potted greenhouse experiment were conducted to investigate the effect of pyroligneous acid (PA) and sea lettuce (SL) on kale (Brassica oleracea subsp. acephala (DC.) Metzg) seed germination and growth. Although previous studies have demonstrated that these two biostimulants could promote plant germination and growth, there is little research to compare their effects on seed germination and plant growth. The pouch assay showed that PA liquid affected the seed germination rate under different concentrations; the seed germination rate decreased as the concentration of PA liquid increased. However, the effect of seed germination was less pronounced in SL liquids. Kale seeds treated with 0.01% PA showed the best elongation and seedling growth performance. Moreover, the greenhouse experiment indicates that SL liquids significantly (p < 0.05) affected kale growth production, while PA liquid had less difference on kale growth under various concentrations. The 0.25% PA and 1% SL increased the aboveground fresh weight by ca. 26% and 29%, respectively. Also, the phytochemical contents of kale leaves, including phenolics, flavonoids, ascorbate, and protein, were significantly increased with 0.25% PA and 1% SL application. These results suggest that low concentrations of PA are more suitable for seedling root growth in kale and 1% SL had the most significant growth-promoting effect on kale. Hydrothermal carbonization sea lettuce liquid can be used as a good biostimulant for agricultural production to improve kale germination and growth. Full article

Azadirachta indica (Neem tree) has become widely naturalised and invasive across many countries and regions including northern Australia. To aid management of A. indica where it has become a weed, a series of studies were undertaken to determine its potential soil seed bank persistence. In a field trial, packets of seeds were buried, retrieved periodically over two years and the seed viability assessed. Viability declined rapidly, with a single viable seed retrieved after 12 months burial and none thereafter. Burial depth, soil type, and pasture cover (present and excluded) significantly influenced viability (%) at 3- and 6-month retrievals. Similar data were obtained from repeated runs of a controlled ageing laboratory experiment, which categorized seeds as forming a ‘transient’ seed bank. In a third trial, fresh fruits were placed on the soil surface in replicated field enclosures over two consecutive years and seedling emergence monitored fortnightly. In both years there was no emergence from pasture excluded soil plots and emergence ceased after 2.3 and 8.4 months in plots with pasture present. A fourth (glasshouse) trial found most seeds will emerge from the soil when buried from 1 to 4 cm. However, more fatal germination than successful emergence was recorded for seeds buried at 8 cm. Seed desiccation and fatal germination are factors in A. indica developing a transient soil seed bank, and infestations require shorter-term control programs where seed input is prevented. Full article

The foxtail millet exhibits a diverse range of hull colors, which are crucial indicators for assessing its nutritional and economic value. However, the molecular regulatory mechanisms that govern the hull color of foxtail millet are largely unknown at present. This gap in knowledge significantly impedes efforts to enhance the quality traits of foxtail millet. This study utilized a population of 250 F₆ recombinant inbred lines (RILs) generated from a cross between two foxtail millet varieties: Yugu18 (with light yellow seeds) and Hongjiugu19 (with red seeds). Four methods, the visual grouping method (I), the visual colorimetric method (II), the Lab determination method (III), and the RGB determination method (IV), were employed to determine the hull color of each line across four environments and QTL identification were conducted subsequently. It showed that there were 10, 12, 69 and 56 QTLs were detected for hull color through four methods, and these QTLs were integrated into 4, 6, 27 and 25 unique QTLs, respectively. There were three, four, four and four major QTLs. Of which, three major QTLs (qHC1.1, qHC1.2 and qHC9.3) on chromosomes 1 and 9 could be detected by all 4 methods. qHC9.1 was detected by all four methods except for method I. There were also one, one, seven and four minor identity QTLs identified across the 4 methods. Four minor QTLs (qHC3.1, qHC3.3, qHC4.1 and qHC5.1) can be stably detected only in method III, and two minor QTLs (qHC8.2 and qHC9.2) can be stably detected only in method IV. Generally, method I is fast, efficient and cost-effective, which is suitable for the rapid detection of hull color. Method II is also low-cost; however, it can detect more QTL for hull color, making it suitable for identifying major QTL loci in large populations. Methods III and IV can map more minor QTL and are more accurate in hull color characterization. This study identified four important hull color QTL for foxtail millet, which largely align with those reported in previous research. These findings establish a foundation for characterizing hull color indices and further advancing QTL mapping for grain color. Full article

The chemical quality of fenugreek seeds is a critical factor influencing their nutritional value, medicinal properties, and suitability for agricultural and industrial applications, making it essential to evaluate their biochemical composition and functional potential. This study evaluated the effects of salinity and different fertilization types on seed quality, early growth parameters, and key biochemical characteristics during fenugreek (Trigonella foenum-graecum L.) cultivation. A field experiment was established at the Agricultural University of Athens during the cropping period 2019–2020 (Year A) and 2020–2021 (Year B) in a split-plot design with the five main fertilization treatments Biocyclic-Vegan Humus Soil (BVH), Farmyard Manure (FM), Organic Compost (OC), Inorganic Fertilizer (IF; 11-14-14), and No Treatment Control (NTC) and two treatments: Elevated Salinity (ES) and Normal Salinity (NS). Fertilization significantly influenced various agronomic traits and seed compositions across both experimental years. The evaluation showed that organic fertilization with BVH yielded the best results among the treatments studied. The BVH × NS treatment consistently produced the highest plant height, seed protein content, seed yield, and mineral content, including nitrogen, calcium, and potassium, compared to the other treatments. ES impacted the concentrations of several elements, namely N (%), Ca (g/100 g), K (g/100 g), Fe (ppm), P (%), and Mg (g/100 g). Salinity also affected certain traits, such as Seed Total Ash and Dry Matter content, with significant interactions observed. These findings highlight the critical role of fertilization, especially organic fertilization, in improving both agronomic performance and seed nutritional quality in the studied crops, as well as in mitigating the adverse effects of salinity. Full article

Horticulture is mainly based on transplanting seedlings produced by specialized nurseries. The recent European authorization of frass in organic farming presents new opportunities for the development of organic seedling production. Frass, a by-product of insect farming, offers innovative solutions for this sector. It mainly consists of insect excrement, exuviae, and uningested feed. Their fertilizing and biostimulating effects have been demonstrated in various pot and field crops experiments. However, the current knowledge regarding the application of frass in seedling production remains insufficient. This study aims to assess the optimal dose of mealworm frass in germination substrates for Allium cepa L., Beta vulgaris L., and Brassica rapa L. Germination and phytotoxicity tests were carried out, with seedlings evaluated one month after sowing in substrates containing frass at concentrations of 0.5%, 1%, 2%, and 3% of frass. The germination test revealed that the dilution of the frass at 1:100 produced a phytostimulant effect on A. cepa and a moderate phytotoxic effect on B. vulgaris and B. rapa. The application of mealworm frass at a concentration of 0.5–1% was generally the most effective dose, although all doses of frass in the substrate resulted in seedlings whose root length, leaf length, number of leaves, and biomass were significantly higher than the control. In conclusion, the application of low doses of mealworm frass in organic seedling production is promising and allows the management of potential phytotoxicity. Full article

Canadian buffaloberry (Shepherdia canadensis (L.) Nutt.) is a perennial shrub known for its drought tolerance, nitrogen-fixing ability, and suitability for land reclamation and vegetation, particularly on nutrient-poor industrially disturbed soils in Alberta, Canada. Despite its ecological importance, commercial nurseries and greenhouses face challenges due to limited knowledge of optimizing seed germination and maintaining genetic diversity in cultivated seedlings. In this study, we investigated the interactive effect of cold stratification duration (0, 2, 4, 8, 12, and 16 weeks) and scarification time (control (no scarification), 1, and 4 h) on buffaloberry seed germination. The seed germination rate was tested using a factorial experiment with two factors arranged in a completely randomized design with four replications. Our findings indicate that scarification with a low concentration of acid for 1 h significantly enhances germination outcomes and shortens the required stratification period from 16 weeks to 12 weeks, achieving an optimal germination rate of 82%. Our novel approach using low-concentration acid to scarify Canadian buffaloberry seeds will help commercial greenhouses and forest nurseries improve seed germination, which utilizes this species for land reclamation and reforestation. Furthermore, this method can be adapted to improve germination in other native species with similar dormancy challenges, broadening its applications in ecological restoration efforts. Full article

The use of seeds versus seedlings may yield different restoration trajectories depending on seed germination (=seedling emergence) success in the of restoration plantings versus seedling establishment. Effective restoration and sustainable population dynamics will require both for long-term persistence. This study compared seed germination in both greenhouse and natural conditions, examining the growth, survival, and reproduction of seedlings from seeds and transplants of a federally endangered perennial, Baptisia arachnifera W.H. Duncan (Fabaceae), in Georgia, USA. Under greenhouse conditions, seed germination is rapid and yields 68% germination across a variety of conditions. In field germination trials, seedling emergence is moderate (20%), but survival, growth, and reproduction are low. Over an 18-yr period (2004–2022) at a restoration planting site in Lowndes County, Georgia, USA, survival, growth, and reproduction were much higher for plants established from seedlings versus plants established from seeds. While dormant plants and seeds are not harmed by winter burns, seedlings derived from both seeds and seedlings are negatively impacted by growing season burns. Restoration efforts in this species should focus on germinating seeds in greenhouses and the effective establishment and management of seedlings, not using seeds directly for restoration efforts. Full article

Setaria viridis (green foxtail) is an invasive weed species in various agricultural systems, prompting the search for effective compounds to control its germination. The species has primary and secondary dormancy depending on the time elapsed since post-harvesting, making management strategies more difficult. Several weed plants, such as Lantana camara L., can be a source of allelochemicals with herbicidal effects, being a potential candidate for the control of S. viridis. We investigated the effects of L. camara extracts on the germination and initial growth of S. viridis seeds with different degrees of dormancy and revealed a dose-dependent bioherbicide effect. Aqueous extracts of L. camara were analyzed by HPLC-DAD and applied (0.1 to 5.0 mg/mL) to 12- and 110-day post-harvest S. viridis seeds. Seeds were evaluated daily and germination percentage (GP), speed germination index (SGI), and radicle length (RL) were calculated. Phenolic acids and flavonoids were major components of the extract. Lower concentrations (0.1 and 0.5 mg/mL) stimulated and accelerated the germination of S. viridis, breaking its dormancy. Both 1.0 and 5.0 mg/mL concentrations hindered germination, especially in 12 dph seeds. The 1.0 mg/mL concentration resulted in longer roots, whereas 5.0 mg/mL inhibited root development. Lantana camara extracts potentially stimulate germination and radicle growth of S. viridis at low concentrations while inhibiting these parameters at higher doses. These results may open new possibilities for using L. camara in weed-control strategies. Full article

The most important product of the lentil crop (Lens culinaris Medik) is the seeds. The main seed characteristics are their size, color, and the cooking time required to make them edible. Cultivar, location of cultivation, and their interaction are the primary factors of raw or cooked seed characteristics. The study examined the impact of five different lentil cultivars (Dimitra, Elpida, Thessalia, Samos, and 03-24L), as influenced by the cultivation environment in four different zones or nine different locations in Central-Northern Greece, on cooking time. The optimal cooking time (OCT) was calculated by cooking the seeds for 0–60 min to determine the percentage of cooked seeds using the penetration test. OCT was associated with the characteristics of both raw (mass of 1000 seeds, external color, and the percentage of mature/immature seeds) and cooked (color and organoleptic characteristics of the cooking media as well as mass increase and hardness and organoleptic characteristics of the seeds) seeds for 30 min. Depending on location, each cultivar had a different mass of 1000 seeds; Elpida had the highest mass (63.9 g), and Dimitra had the lowest (33.1 g). This was linked to OCT, which was among the highest (57.5 min) for Elpida, lowest (49 min) for Dimitra, and intermediate for Thessalia, Samos, or 03-24L. The average OCT was 55.9 min for all samples. The seed from the five locations with the shortest OCT was considered appropriate for human consumption. Two locations yielded seeds with intermediate OCT, while the other two produced the highest OCT; these were recommended for processing or propagation. In this study, the cultivar factor had a greater effect on raw seed characteristics, while the location factor had a greater effect on cooked seed characteristics and OCT than either the location, the cultivar factor, or the cultivar x location interaction. Full article

Seed germination is a complex process involving imbibition, activation and subsequent growth. In addition to re-establishing metabolic activity, water uptake helps stabilize macromolecules and biochemical reactions, resulting in radicle protrusion. Factors affecting water uptake include seed composition, water availability and seed coat permeability. Water entry sites vary with species and occur primarily through the hilum, micropyle or lens. In addition, seed size influences water uptake, where larger seeds are usually less permeable. The seed coat plays a significant role in regulating the water absorption process. Several seed coat characteristics, including color, thickness and differences in the anatomical structure, such as the presence of pores, cuticles and radicle pockets, alter water permeability. Similarly, the presence of either physical or physiological seed dormancy negatively affects water uptake. This review emphasizes that understanding seed characteristics, such as size, shape and seed coat permeability, and their relationships is essential for breeding and selecting seeds with desirable traits, as they directly influence water uptake, leading to improved germination and growth. Full article

Seedling establishment is often a critical bottleneck in the revegetation of mine tailings and similar substrates. Biochar and deactivated yeast are potential sustainable materials that could be used in this context as seed coatings to aid in seedling establishment. We conducted a greenhouse study on biochar and deactivated yeast use as seed coatings, assessing germination, establishment, and early growth of white clover (Trifolium repens) and purple prairie clover (Dalea purpurea). Coated seeds were applied to a mine tailing, a coarse granitic sand, and potting soil mix substrates; seedling establishment and growth were monitored over 75 days. Biochar coatings enhanced the seedling establishment of Trifolium, with biochar and biochar plus yeast coatings giving the best results. In some cases, these effects persisted throughout the experiment: biochar coatings resulted in a ~fivefold increase in Trifolium biomass at harvest for plants in the potting soil mix but had neutral effects on sand or tailings. Biochar seed coatings also enhanced Dalea germination in some cases, but the benefits did not persist. Our results indicate that biochar-based seed coatings can have lasting effects on plant growth well beyond germination but also emphasize highly species-specific responses that highlight the need for further study. Full article

The plant seed-borne microbiome comprises microorganisms vertically inherited from the mother plant. This microbiome is often linked to early-life protection and seedling growth promotion. Herein, we compare the seed-borne bacteriomes of a commercial hybrid (Santa Helena) and a landrace maize variety (Sol da Manhã). The landrace variety displays a more diverse seed-borne microbiome, featuring a variety of taxa across samples with an average Shannon’s diversity index of 1.12 compared to 0.45 in the hybrid variety. The landrace variety also showed a greater alpha diversity of 165.8, in contrast to 144.1 in the hybrid. Although both microbiomes lack a functional nitrogen fixation apparatus, we found a remarkably distinct presence of genes associated with phytohormone production and phosphate solubilization, particularly in the landrace variety. In addition, we recovered 18 metagenome-assembled genomes (MAGs), including four from potentially novel species. Collectively, our results allow for a better understanding of the contrasting diversity between maize varieties. The higher potential for phytohormone production in landraces, the absence of nif genes in both varieties, and the identification of core microbiome taxa offer valuable insights into how microbial communities impact plant health and development. This knowledge could pave the way for more sustainable and innovative agricultural practices in crop management. Full article

Internal transport (endozoochory) and external transport (epizoochory) by migratory waterbirds are key mechanisms of long-distance dispersal for seeds and other diaspores of plants lacking a fleshy fruit. Beginning with Darwin in 1859, we review how opinions about the relative importance of epizoochory and endozoochory have changed repeatedly over time and how this allows us to reassess our modern understanding of plant dispersal. Darwin was mistaken in asserting that diaspores cannot survive passage through the gut of waterbirds or other granivorous birds. This “digestion myth” led him to underestimate endozoochory and overstate the importance of epizoochory, an approach which is echoed throughout the literature until the present day. Darwin also focused on aquatic plants, yet it is now clear that waterbirds are also major vectors of terrestrial plants. Based on their empirical observations and experiments, other less influential scientists (notably Hesselman in 1897, Guppy in 1906 and Proctor in the 1960s) argued that endozoochory is the more important mechanism for waterbirds. Modern field and experimental studies demonstrate the dominant role for endozoochory. Unfortunately, avian endozoochory of dry-fruited plants continues to be ignored as a dispersal mechanism by many plant ecologists, which we attribute to Darwin’s continuing influence. However, this endozoochory has major implications for plant biogeography and requires wider recognition and research. Full article

The use of microbial seed priming may be a promising tool to improve the first stages of seed germination of several herbaceous species. In tomatoes (Solanum lycopersicum L.), enhanced germination and vigor, and biotic and abiotic stress control, with a reduction in chemicals, have been reported. In this study, seeds from two Italian tomato varieties (Canestrino di Lucca and Pisanello) were primed with seven different strains of plant growth-promoting rhizobacteria (PGPB) belonging to Azospirillum baldaniorum, A. brasilense, Methylobacterium symbioticum, Bacillus amyloliquefaciens, B. licheniformis, and B. subtilis. They were selected for their ability to produce auxin. The germination test was carried out on treated seeds and the germination percentage was calculated. The obtained seedlings were transplanted and kept in greenhouse conditions. After 60 d, fresh and dry weight, root number, and length of plantlets were recorded. A general and significant improvement in the growth parameters was observed in the treated plants. All microbial strains proved to be indolacetic acid (IAA) producers using the Salkowsky method. A positive relationship between root number and length, and amount of IAA was found. The overall results suggest that the microbial priming of tomato seed could be useful for advancing organic farming, sustainable agriculture, and environmental protection. Full article

The Sideritis genus includes over 150 species primarily found in the Mediterranean basin, including the S. clandestina subsp. pelopponesiaca from the Peloponnese and S. scardica from North and Central Greece. In vitro seed germination has proven effective for conserving and amplifying the genetic diversity of endangered species such as Sideritis. This study aimed to optimize in vitro germination and seedling growth of S. scardica and S. clandestina subsp. pelopponesiaca under different lighting conditions at 22 °C, including white fluorescent lamps (WFL-BG-40) and LEDs (LED-BGYOR-40, LED-BR-40, LED-BR-80, LED-BR-120) all under a 16-h light/8-h dark photoperiod (WFL: white fluorescent light, B:blue, G:green, Y:yellow, O:orange, R:red, 40–80–120 μmol m⁻² s⁻¹), along with a 24-h dark treatment. The results indicated that LED-BR-80 combined with 250 mg L⁻¹ GA₃ in the MS medium promoted best germination (40%, day 55) and shoot proliferation in S. clandestina subsp. pelopponesiaca. Conversely, 5-year-old cold stratified S. scardica seeds showed higher germination rates (80%) and robust seedling growth under LED-BGYOR-40 with 250 mg L⁻¹ GA₃, particularly thriving in LED-BR-120 for increased shoot height and root number. This is the first report of the efficacy of LED technology in optimizing in vitro conditions for Sideritis species, crucial for their conservation and sustainable commercial cultivation. Full article

Soybean breeding programs targeting tofu quality must evaluate their performance within zones of adaptation. A comprehensive study was carried out to examine soybean breeding lines from three maturity groups (MGs; MG0, MG00, and MG000) from 2018 to 2022. Several agronomic, chemical composition and tofu-related quality traits were evaluated, and the associations among traits were investigated. The results showed that genotypes in MG0 yielded higher and matured later, which confirmed that the selection of targeted genotypes for a specific maturity group was successful. Non-imbibed “stone seeds”, an important quality trait for tofu processors, were higher in MG000 lines. Tofu texture using both GDL and MgCl₂ coagulants was positively associated, indicating one coagulant might be enough for screening purposes. The MG by traits biplot showed very clear MG clustering for all genotypes tested from 2018 to 2022, signifying that the MG has a more pronounced effect on the investigated traits than the environmental effects seen in different years, regardless of the MG. Most tofu-related traits were higher and showed stronger associations in MG0 lines compared to the lines in earlier MGs, indicating a need for future effort in shorter season MGs. Overall, this study provided useful information for selecting soybean lines for tofu end-use application targeting specific MGs. Full article

Seedling growth is one of the most important stages for the establishment of natural and artificial regeneration. For the first time, the initial growth and biomass allocation of seedlings germinated from cryostored seeds of Parkia nitida were analyzed. P. nitida is an economically and ecologically important timber tree species distributed in Central and South America. Cryostored seeds germinated quickly after priming by scarifying a part of the seedcoat with emery paper, reaching a germination percentage of 94%. Thirteen weeks after germination, the seedlings grew to a height of 16.5 to 60.0 cm. The results of our study, under different day/night alternating culture temperatures, showed that culture temperature had a direct correlation with seedling growth, total biomass allocation, and biomass partitioning. The greatest growth (height, diameter, and number of node sections) and greatest biomass allocation (leaf, stem, and root weight) were recorded under alternating temperatures of 30/25 °C, and these decreased with decreasing culture temperatures to 25/20 °C and 20/15 °C. Shoot:Root (S:R) ratios also decreased with decreasing culture temperatures, but a statistically significant difference (p < 0.05) was only observed between 20/15 °C and 30/25 °C. However, significant differences were not observed in Photosynthetic:Non-photosynthetic organ ratios among the different alternating culture temperatures. This study provides fundamental information for the production of good-quality seedlings of the fast-growing tropical trees of the legume family. Full article

Nigella sativa, also known as black cumin, is esteemed for its rich reservoir of health-benefitting phytoconstituents nestled within its seeds. The composition of its seeds can be influenced by factors such as genotype diversity and agricultural practices. Understanding these dynamics is important for maximizing the nutritional and medicinal attributes of the seeds. This study investigated how different genotypes, growing densities, and sowing times affect oil yield and phytoconstituents of Nigella seeds in Northern Australia. The aim was to find the optimal combination of these factors to maximize desirable compounds. Our findings revealed variability in oil yield and phytoconstituents among different genotypes, growing densities, and sowing times. No single genotype stood out as having elevated levels of all desired compounds. For instance, genotype AVTKS#5 had high total phenolic content (TPC) and antioxidant capacity, while AVTKS#8 and AVTKS#7 excelled in thymoquinone (TQ) and polyunsaturated fatty acids (PUFAs) and monounsaturated fatty acids (MUFAs), respectively. Planting density had a nuanced impact, with no significant effect on oil yield and CUPRAC values, but higher densities decreased TPC, FRAP, and TQ. Interestingly, seeds cultivated at 20 and 30 plants/m² had higher ratios of MUFAs/SFAs, PUFAs/SFAs, and (MUFAs + PUFAs)/SFAs, indicating the importance of planting density in shaping fatty acid profiles. Sowing times also had a noticeable effect, with late sowing leading to a decrease in oil yield from 19% to 14%. May-sown seeds had higher TPC, FRAP, CUPRAC, and fatty acid ratios, while TQ levels peaked in June-sown seeds. Our study highlighted positive correlations among TPC, FRAP, CUPRAC, and TQ, emphasizing their collective contribution to the nutritional and medicinal potency of Nigella seeds. Fatty acids, on the other hand, showed no significant correlation with these parameters, indicating independent regulation. In summary, our comprehensive analysis provides insights into the factors (genotype and agronomic practice) that shape the phytochemical profile of Nigella seeds, and suggests better genotype, planting density, and time of sowing for the cultivation and quality production. Full article

Seed germination (GS) and seedling growth are vital plant stages that can be affected by stresses such as drought and aging, which cause deterioration and reduce seed viability. With the aim of homogenizing and improving GS, priming treatments with biostimulants such as the antioxidant melatonin are commonly used in seeds. In this study, the effects of melatonin on germination and seedling growth in two different situations, i.e., aging seeds of rice, barley, and sorghum and under polyethylene glycol (PEG)-induced drought stress in sorghum, were studied. Aged seeds were primed for 7 days in different concentrations of melatonin, and drought stress seeds were primed for 24 h before PEG treatment for 7 days, and germination and initial growth parameters were monitored. Aging-seeds of rice and barley showed the maximum response in terms of germination percentage at 20 µM melatonin and 0.05 µM respectively; while aging-seeds of sorghum showed improvement in germination for practically all concentrations studied, even the highest tested at 50 µM. Regarding the effect of melatonin treatments on drought stress in sorghum seeds, all the studied parameters showed a significant attenuation of the adverse effects of drought stress, alleviating them, for all concentrations tested but especially at 200 µM melatonin. The results obtained confirm that priming seeds with melatonin under low germinability conditions relieves stress and improves both germination and seedling growth. Full article

Jatropha curcas L. (J. curcas), a shrub plant of the Euphorbiaceae family, has received enormous attention as a promising biofuel plant for the production of biodiesel and medical potential in ethnopharmacology. However, the tumor-promoter toxin phorbol esters present in J. curcas raise concerns for health and environmental risk as its large-scale cultivation limits the use of meal obtained after oil extraction for animal feed. Here, we determined the variation of phorbol ester profiles and contents in eight J. curcas tissues by high-performance liquid chromatography (HPLC) and found phorbol esters present in all parts of the plant except the seed shell. We showed tissue-specific patterns of accumulation of phorbol esters and associated terpenoids at the transcriptional level with high transcript levels in reproductive and young tissues. Genes involved in the same module of terpenoids biosynthesis were positively correlated. We further present diverse abiotic and biotic stresses that had different effects on the accumulation of transcripts in terpenoids shared and branched terpenoid pathways in plant seedlings. The fine-tuning of terpenoids biosynthesis may link with ecological functions in plants under extreme environments and defense against pathogens. Full article

Studying the evolution of seed morphology and, in turn, the evolution of cultivars across time and space is of fundamental importance to agriculture and archaeology. The identification of ancient and modern grapevine (Vitis vinifera L.) cultivars is essential for understanding the historical evolution of grape cultivation. Grape seed morphology provides valuable information to explore the evolution of grape cultivars over time and space. The main aim of our study was to build a comprehensive regional database of grape seed morphological traits from modern and archaeological wine cultivars and wild grape species. We aimed to identify which seeds of modern grape cultivars exhibited morphological similarities to archaeological cultivars. This study focused on fifteen distinct modern types of seeds and two archaeological samples from the Byzantine-to-Early Medieval period. We acquired digital images of seeds using a flatbed scanner. For each sample, 100 seeds were randomly selected, and morphometric data on each seed were gathered using ImageJ. Differences among the seed cultivars were investigated using linear discriminant analysis. Archaeological seeds were found to be more similar to cultivated V. vinifera cultivars rather than V. sylvestris populations. Among the cultivated cultivars, Sangiovese and Tosta antica resulted to be cultivars most similar cultivars to the archaeological ones. The morphometric analysis of grape seeds proved to be a valuable resource for investigating the evolution of vine cultivars throughout history. Combining image analysis techniques with genetic data will open new perspectives for studying the origins of and variations in grape cultivars, contributing to the conservation and enhancement of viticultural heritage. Full article

The Vitis IMIDRA collection contains 3699 entries, representing a significant percentage of the variation in traditional and commercial Vitis cultivars used in Spain. The classification and identification of new entries are currently conducted based on ampelography and molecular methods. Here, we propose a new method of classification of the cultivars based on seed morphology and its application to a total of 224 varieties from the collection. Based on seed shape, fourteen groups have been defined according to the similarity of the seeds, with geometric figures used as models. The new models are Cariñena Blanca, Chardonnay, Parraleta, and Parduca, defining new groups to be added to the ten groups previously described. The study results in 14 groups comprising the Spanish cultivar’s seed shape and morphological variation. Seed morphology can help to identify varieties cultivated in the past through archaeological finds. Full article

Castor (Ricinus communis) is an oilseed usually cultivated in tropical and semi-arid conditions. The slow and uneven germination of castor seed is causing poor crop establishment and reduced seed yield. This series of studies investigated several factors influencing the time for castor seed germination and seedling emergence. Studies were made on the effect of seed coat permeability to water and the influences of temperature, morphology, and the hormone gibberellin. The best temperature for castor seed germination was near 31 °C, and the seed coat was permeable to water. The mechanical resistance of the seed coat was a mechanism controlling the germination of the castor seed. The time for germination was strongly associated with the seed coat relative weight, but it had little influence from other morphological characteristics. After the castor plants were subjected to three cycles of selection for fast germination, the seed weight was reduced, the caruncle became larger, and the seed coat became thinner. Gibberellin applied to the seed promoted a faster and higher germination rate. Pre-germination of the castor seed was not effective for promoting faster seedling emergence. Attempts to improve castor seed germination should integrate the many factors that influence this physiological process. Full article

Seeds play a vital role in the perpetuation of plant species, both in natural environments and agriculture. However, they often face challenges from biotic stresses, such as seed-borne pathogenic fungi. The transgenerational transmission of these seed-borne fungi, along with their dissemination during seed commercialization, can contribute to the emergence of global epidemic diseases, resulting in substantial economic losses. Despite the recognized impact of seed-borne pathogens on agriculture, our understanding of seed–pathogen interactions remains limited. This review establishes parallels between the current state of knowledge regarding seed responses to pathogen interactions and well-established plant defense models, primarily derived from typical physiological conditions observed during leaf infections. Examining fragmented results from various pathosystems, this review seeks to offer a comprehensive overview of our current understanding of interactions during seed development and germination. The necrotrophic interactions in Brassicaceae are described using recent transcriptomic and genetic studies focused on the Arabidopsis/Alternaria pathosystem, which illustrates original response pathways in germinating seeds that markedly differ from the general concept of plant–pathogen interactions. The co-existence of regulatory mechanisms affecting both seed resistance and susceptibility, potentially promoting fungal colonization, is examined. The vulnerable response during germination emerges as a crucial consideration in the context of sustainable plant health management in agriculture. Full article

Despite exhibiting intriguing features associated with its multipurpose applications and drought tolerance, Ferula communis remains a wild and uncultivated species, with limited experimental research on its biology, starting from seed germination and extending to its ecology. The purpose of this study was to investigate potential germination and kinetics in F. communis seeds in response to four cold stratification periods (0, 15, 45, and 90 days at a constant temperature of 5 °C) and four temperatures (5, 10, 15, and 20 °C) under continuous darkness. F. communis exhibited a pronounced germination potential exceeding 90%, with the optimal temperature for germination falling within the range of 5 °C to 15 °C, without necessitating cold stratification. A dramatic drop of the germination percentage was observed at 20 °C (<10%), suggesting a form of conditional dormancy attributed to the higher temperature tested. Full article

As differences in seed dormancy between Actinidia species have not been reported previously, in this study we characterized the variation in the dormancy of seeds in 13 kiwifruit species that originated from different regions of China and Taiwan, and for which mature plants are now growing in New Zealand orchards. Dormancy-breaking treatments, including cold-moist stratification, seed coat scarification and soaking in water and gibberellic acid (GA₃), were tested for their efficacy in alleviating dormancy and improving final germination and germination rates. In addition, we assessed seed viability using RNA integrity analysis to distinguish dead seeds from dormant seeds. This study identified that dormancy type in Actinidia seeds is species-specific and can be morphological, morphophysiological or a combination of physiological and physical, and that seed RNA integrity is a useful metric to incorporate into seed dormancy studies. Our results also suggest that species originating from colder climates that experience large differences between winter minimum and summer maximum temperatures exhibit physiological dormancy and require cold-moist stratification, contrasting with species originating in milder climates. Interestingly, although not all seeds from all the species were dormant, the proportion of dormant seeds in each species did not correlate to the climatic data of the region from which they originated. These findings provide new insights into mechanisms of seed dormancy in kiwifruit. Full article

Annona fruit, leaves, seeds, roots, and bark have been conventionally used in many countries for medical treatments as they are considered ideal sources of pharmacologically active compounds, but Annona remains an underutilized fruit in many countries. The fruit of these plants is delicately flavored and is used in industrial products such as ready-to-serve beverages, wine, jellies, jam, and fruit-butter preserve, while the seeds generally go to waste. Annona seed oil contains numerous health-benefiting factors such as vitamins, minerals, bioactive compounds, fatty acids, antioxidants, and phenolic compounds, which are responsible for various biological activities, including antibacterial, antioxidant, and antitumor activities. Cancer is a worldwide major health problem that remains unresolved. Even though the current treatments can manage to reduce tumor growth, there is an urgent need to investigate more efficient but less expensive novel techniques to overcome some of the restrictions in treating tumors. Annona might offer an indispensable choice besides chemotherapy and radiotherapy, especially for terminally ill patients, as the Annona genus contains secondary metabolites in nearly every component of Annona plants. Research has shown that many Annona species contain promising components that could potentially exhibit anticancer activity, but the information available is scarce and inconsistent. Annona muricata (Soursop, “Katuanoda”), Annona squamosa (Sweetsop, “Seenianoda”), and Annona reticulata (Custard apple, “Welianoda”) are three commonly cultivated edible Annona species in Sri Lanka. The main objective of the review was to present an updated comprehensive literature analysis of the putative chemopreventive functions against cancer cell lines/the anticancer effect on cancers, phytochemical properties, and antioxidant properties possessed by the seed oils of three selected common Annona species. Although there are some in vitro and in vivo experimental investigations supporting the benefits of Annona seed oils, clinical investigations are still needed to explore concealed areas, determine the effects on the human body, determine the safest concentration, and determine health-contributing benefits before they are submitted to clinical trials. Full article

It has been noticed that Saraca asoca (Roxb. de Wilde) populations are drastically declining in the wild. Conserving such populations is crucial because of the numerous ecological, cultural, and economic values. The purpose of our study was to determine if germination and seedling growth could be improved for globally vulnerable Ashoka populations. The study analyzed the effect of various hydro, mechanical, and chemical pre-sowing treatments on the germination and one-year growth of Ashoka seedlings. Our results demonstrated that mechanical (exposing the seed cotyledons) and soaking of seeds in hot water treatments (60 °C) were better than all other water- and chemical-based pre-sowing treatments used in the study of enhancing germination. Nevertheless, chemical treatments were better for the growth and survival of the seedlings. This methodology offers to restore the scattered populations of Ashoka that are facing the risk of extinction in the wild while successfully meeting the commercial demand for this medicinal tree. Full article

Sesame (Sesamum indicum), a highly valued oilseed, faces challenges in cultivation, especially in regions susceptible to environmental stressors. This study investigates the interactive effects of salinity and temperature on sesame seed germination. Two cultivars, Darab 1 and Oltan, were subjected to various salinity levels (−3 to −12 bars) and temperatures (15 °C, 20 °C, and 25 °C). Results revealed that at 15 °C, salinity levels beyond -3 bars significantly reduced germination, while at 25 °C, 40% and 62% germination rates were recorded even at −12 bars for Darab 1 and Oltan, respectively. This study highlights the importance of temperature in mitigating the inhibitory effects of salinity on germination. Germination speed exhibited a decline with increasing salinity, particularly at lower temperatures. Shoot and root lengths and dry weights decreased with rising salinity, but Oltan demonstrated greater tolerance than Darab 1. The research emphasises the species-specific nature of temperature-salinity interactions and the intraspecific variability among sesame cultivars. Notably, Oltan, adapted to arid regions with elevated temperatures, displayed increased tolerance to salinity stress. These findings contribute to understanding sesame’s resilience to environmental stressors, aiding in developing resilient cultivars for challenging agricultural landscapes. Overall, temperature is pivotal in influencing sesame seed germination and early seedling growth under salinity stress, offering insights for optimised cultivation practices. Full article

Seeds are classified as either: orthodox, seeds that tolerate dehydration; recalcitrant, seeds that are high in moisture content and cannot withstand intensive desiccation; or intermediate, seeds that survive dehydration but die during dry storage at low temperatures. Seed lifespan depends on the seed category and also varies from one species to another. The rate of loss of vigor and viability of orthodox seeds depends mainly on temperature and seed moisture content (MC); the lower the MC and storage temperature, the longer the longevity. Ultimately, storage in liquid nitrogen or seed ultra-drying by well-adapted processes should allow for long-term storage. The ageing of orthodox seeds is associated with numerous forms of cellular and metabolic damage (membrane integrity, energy metabolism, and the impairment of DNA, RNA, and proteins) in which reactive oxygen species play a prominent role. Interestingly, priming treatment can reinvigorate aged seeds by restoring the antioxidant systems. The storage of recalcitrant seeds is very difficult since they must be placed in a wet medium to avoid dehydration and at temperatures low enough to prevent germination but warm enough to avoid chilling injury. A better understanding of the mechanisms involved in ageing is necessary to identify markers in order to estimate seed longevity. Full article

The Cucurbitaceae is a monophyletic family with close to 1000 species of climbers, including important agronomic species and varieties characterized by tendrils and pepo fruits. The seed’s morphology is varied, and the development and structure of the seed coat have been described in detail on some species. Overall description of the seed shape is based on terms comparing it with geometric figures, but quantitative methods are lacking in the literature. Here we apply a general morphological analysis to seeds of representative genera of the Cucurbitaceae, followed by curvature analysis in the poles and symmetry analysis. These methods are useful for the quantitative description of seed shape and the comparison between species and varieties. Differences between species were found for most morphological measurements, as well as for symmetry and curvature values. The comparison between three species of Cucumis (Cucumis sativus, C. myriocarpus and C. melo) and two varieties of C. melo reveals differences between species and varieties both in curvature and symmetry. The results obtained from both methods, curvature and symmetry analysis, form similar groupings in a cluster analysis. The methods described here were applied for the identification of agronomic varieties and the quantitative description of seed shape in taxonomy. Full article

The tillage method determines several soil physical parameters that affect the emergence of post-rice chickpea (Cicer arietinum L.) in the Indo-Gangetic Plain of South Asia. Mechanised row-sowing with minimum soil disturbance and crop residue retention in medium-to-heavy-textured soils will alter the seedbed when compared to that prepared after traditional full tillage and broadcast sowing. Whilst minimum soil disturbance and timely sowing may alleviate the soil water constraint to crop establishment, other soil physical properties such as soil strength, bulk density, and aggregate size may still inhibit seedling emergence and root elongation. This study’s objective was to determine the limitations to chickpea crop establishment with increasing bulk density and soil strength, and different aggregate sizes below and above the seed. In two growth cabinet studies, chickpea seed was sown in clay soil with (i) a bulk density range of 1.3–1.9 Mg m⁻³ (Experiment 1) and (ii) the combination of bulk densities (1.3 and 1.8 Mg m⁻³) and aggregate sizes (<2 mm and >4 mm) above and below the seed (Experiment 2). Root length was significantly reduced with increasing bulk density (>1.4 Mg m⁻³), and soil strength impeded early root growth at >1 MPa. Where main root growth was impeded due to high bulk density and soil strength, a greater proportion of total root growth was associated with the elongation of lateral roots. The present study suggests that the soil above the seed needs to be loosely compacted (<1.3 Mg m⁻³) for seedling emergence to occur. Further research is needed to determine the size of the soil aggregates, which optimise germination and emergence. We conclude that soil strength values typical of field conditions in the Indo-Gangetic Plain at sowing will impede the root growth of chickpea seedlings. This effect can be minimised by changing tillage operations to produce seedbed conditions that are within the limiting thresholds of bulk density and soil strength. Full article

The genus Alstroemeria originates from South America, and Chile is one of the countries showing the highest number of taxa (49), of which 40 are endemic. However, anthropogenic and environmental factors are affecting the survival of these species; therefore, the conservation of their genetic variability is of great importance, and can be achieved through seed propagation. Seeds of this genus normally show dormancy, which prevents their germination under favorable conditions. The objective of this work was to understand the pre-germinative barriers to develop a seed propagation protocol for native alstroemerias and to determine the best method to break their dormancy. Seeds from 10 Alstroemeria species native to Chile were collected from the Coquimbo Region to Maule Region, and 5 pre-germination treatments combining scarification and stratification methods were evaluated. Moreover, a morphological and biochemical evaluation of the seeds was performed. The results showed a positive and significant effect on the percentage of emergence using seed soaking in water and cold stratification at 13 °C, obtaining the best results in A. pelegrina and A. angustifolia subsp. angustifolia (98.33% and 91.67%, respectively) after 30 days. The morphological characterization of seeds showed a wide range of size (diameter), from 2.18 mm (A. pulchra subsp. pulchra) up to 3.43 mm (A. pelegrina), and different shapes (pseudospherical and angular) and textures (rough and smooth). The highest phenol and tannin concentrations were observed in A. hookeri subsp. maculata with values of 4.71 and 30.95 mg g⁻¹ of seeds, respectively. A bigger size of the seed and a higher concentration of phenols could be related to a higher % of emergence of alstroemeria seeds. Full article

The elongation of the mesocotyl and the coleoptile and other seedling traits were analyzed from 16 hybrids of two seed sizes, five varieties and a control. Sowing was conducted in sand beds during the S-F 2020 cycle, where nine genotypes were identified that differed in the elongation of the mesocotyl: long (H-48, HS-2 and Promesa); medium (H-44-H-52 and H-70); and short (H-49 AE, H-40 and H-32). A total of 36 possible crosses were obtained between these nine parents, which were established in the S-S 2021 cycle, and on sand beds. Results show that seed size affected (p< 0.05) the speed and percentage of emergence, the elongation of mesocotyl–coleoptile, the biomass and the heterosis in parents and their crosses. The H-48 hybrid presented greater speed and percentage of emergence and elongation of the mesocotyl and the coleoptile with both seed sizes. The highest dry weight of mesocotyl, coleoptile, roots, and leaves was found in the hybrids Promesa and H-48. The crosses between parents with contrasting mesocotyl presented superior elongation and dry weight (p ≤ 0.05) compared to their parents, with the long × long (1 × 2, 1 × 3 and 2 × 3) crosses standing out for all the traits measured. A strong positive association was obtained (p ≤ 0.01) between the elongation of the mesocotyl–coleoptile, the percentage of emergence, and the production of total dry matter in parents and their crosses. Full article

Seaweeds are used in traditional agriculture practices because of their beneficial effects. Recently, the rising demand for organically grown foods has amplified the use of organic fertilizers such as seaweed extracts. Despite their beneficial effects, few studies have reported information about compounds in seaweed extracts that are responsible for these benefits. Thus, the aim of this study was to evaluate the potential relationships between the components and secondary metabolites in four seaweed liquid extracts from Eisenia arborea, Macrocystis pyrifera, Padina caulescens, and Sargassum horridum and their biostimulant activity through changes in the germination, growth, and protein content of tomato seedlings (Solanum lycopersicum). The E. arborea and S. horridum extracts showed similar compositions (ash, organic carbon, bicarbonates, and chlorides), minerals (Ca, Fe, and Cu) and secondary metabolites (triterpenes and saponins), albeit with different component concentrations. The chemical composition of the P. caulescens extract was significantly different from those of the other extracts; it was characterized by high levels of total nitrogen, phenols, and carbohydrates. Almost all seaweed extracts had beneficial effects on seed germination and seedling length, except the S. horridum extract that inhibits germination. The hierarchical clustering plots and principal component analysis indicated that germination and protein content are related to the presence of sterol. Shoot length was closely related to mineral levels (K, Zn, B, Na) and the C:N ratio, whereas radicle length was closely related to the content of nitrogen, carbohydrates, phenols, and flavonoids in the seaweed extracts. However, the underlying mechanisms are still unclear and require further studies. Full article

Ascorbic acid (AsA) is mainly known as an antioxidant. However, if the peculiar features of the AsA system in the different stages of seed development and germinationare taken into consideration, it can be concluded that the function of AsA goes far beyond its antioxidant properties. The possible involvement of AsA in the regulation of hormone synthesis and in the epigenetic control of gene expression opens new directions to further research. In recent years, seed priming with AsA has been successfully used as a strategy to improve germination and plant productivity. Beneficial effects of seed AsA priming could be observed in several crop species, but the underlying molecular mechanism(s) are still unclear. The available evidence suggests that AsA priming induces a wide range of coordinated responses allowing primed seeds to overcome adverse environmental conditions. Full article

Abiotic stresses, sometimes due to dramatic environmental changes, such as sudden and heavy rainfalls, or drought, increasing temperatures or soil salinization, deeply affect the growth and yield of plants. Progress in terms of improving the abiotic stress tolerance of plants can be obtained via classical breeding and genetic engineering, which can be slow, or by practice, such as acclimation and seed priming. The latter can improve seedling performance, and it can be considered a short-term approach. Seed priming with different agents and biopriming may offer the possibility to improve stress tolerance, even though its beneficial effect depends on crop species, dose, and time of application. The aim of this review is to highlight some of the current research trends that may ultimately lead to strategies for stress-proofing crop species. The focus is on those abiotic stresses, e.g., drought and soil salinity, that are most often associated with climate change and poor agricultural practices and those crops that are most important for human nutrition. Comments are provided on the challenges and pros and cons of this methodology. Full article

The pre-sowing treatment of seeds with an α static magnetic field has been reported in the literature as a means of enhancing plant development. In this work, we have designed, characterized, and constructed a setup for exposing small vegetable seeds to a static magnetic field. In a series of experiments, we have treated the seeds of vegetables that are important for the Mediterranean diet, i.e., tomato, lettuce, and salad rocket. The results show that tomato seedlings significantly benefit from a pre-sowing treatment with a magnetic flux density of 45 mT, for both an exposure time of 60 and 90 min compared to control, while the time of treatment that leads to improved growth is 90 min. In order to improve the growth of salad rocket seedlings the magnetic field had to be 150 mT, whereas the results for lettuce seeds were a bit inconsistent, i.e., it is not clear whether a lower (45 mT) or a higher (300 mT) magnetic flux density should be applied. Full article

Solanum paniculatum L. belongs to the Solanaceae family and has the ability to grow and develop under unfavorable environmental conditions such as drought and salt stress, acid soils and soils poor in nutrients. The present work aimed to analyze S. paniculatum seed transcriptome associated with induced tolerance to drought stress by osmopriming. Seeds subjected to osmopriming (−1.0 MPa) displayed a higher germination and normal seedling percentage under drought stress when compared with unprimed seeds. RNA-seq transcriptome profiles of osmoprimed and unprimed seeds were determined and the potential proteins involved in the drought tolerance of S. paniculatum were identified. From the 34,640 assembled transcripts for both osmoprimed and unprimed seeds, only 235 were differentially expressed and, among these, 23 (10%) transcripts were predicted to code for proteins potentially involved in response to stress, response to abiotic stimulus and response to chemical. The possible mechanisms by which these stress-associated genes may confer tolerance to osmoprimed Solanum paniculatum seeds to germinate under water deficit was discussed and may help to find markers for the selection of new materials belonging to the Solanaceae family that are more tolerant to stress during and following germination. Full article

Artificial intelligence is more present than ever in virtually all sectors of society. This is in large part due to the development of increasingly powerful deep learning models capable of tackling classification problems that were previously untreatable. As a result, there has been a proliferation of scientific articles applying deep learning to a plethora of different problems. The interest in deep learning in agriculture has been continuously growing since the inception of this type of technique in the early 2010s. Soybeans, being one of the most important agricultural commodities, has frequently been the target of efforts in this regard. In this context, it can be challenging to keep track of a constantly evolving state of the art. This review characterizes the current state of the art of deep learning applied to soybean crops, detailing the main advancements achieved so far and, more importantly, providing an in-depth analysis of the main challenges and research gaps that still remain. The ultimate goal is to facilitate the leap from academic research to technologies that actually work under the difficult conditions found in the the field. Full article

Neotropical orchids are vulnerable to extinction due to overharvesting, habitat destruction and climate change. However, a basic understanding of orchid seed biology to support conservation efforts is still lacking for most species. Seed morphology is linked to plant adaptation and evolution, influencing seed dispersal, dormancy, longevity, and germination, which are valuable traits for conservation. In this study, we characterized and compared the morphological traits of seed capsules (size, shape, and colour) and seeds (seed and embryo shape and size and internal airspace volume) for three epiphytic Neotropical orchid species of the genus Lycaste native to Guatemala: L. cochleata, L. lasioglossa, and L. virginalis. The three species show qualitative similarities in seed capsule colour and appearance and in seed morphology (i.e., scobiform oval-shaped seeds and prolate-spheroid embryos). All species have small-sized seeds (length of L. cochleata: 210 µm, L. lasioglossa: 230 µm, and L. virginalis: 260 µm), with proportionally large embryos (length of L. cochleata: 140 µm, L. lasioglossa: 120 µm, and L. virginalis: 150 µm) and an internal air-space volume that occupies less than half of the seed (L. cochleata: 17%, L. lasioglossa: 42%, and L. virginalis: 30%). This finding is consistent with previous reports for other epiphytic orchid species, which typically have lower air volumes than terrestrial orchids. These differences are likely a result of evolutionary changes associated with different habits and may influence seed dispersal. We also found some significant differences in seed morphology between the studied species, but their taxonomic, biological, and ecological relevance remain to be elucidated. More comparative studies, including on other Lycaste species with different habits, are needed to explore relationships between seed morphology, taxonomy, biology, and ecology in this genus to support its conservation. Full article