You seem to have javascript disabled. Please note that many of the page functionalities won't work as expected without javascript enabled.

Search for Articles:

Title / Keyword

Author / Affiliation / Email

Journal

Article Type

Advanced Search

Section

Special Issue

Volume

Issue

Number

Page

Logical OperatorOperator

Search Text

Search Type

Submit to Proteomes Review for Proteomes

Journal Menu

Journal Browser

► Journal Browser

Most Cited & Viewed

Most Cited & Viewed Papers

Most Cited Papers
Most Viewed Papers
Most Downloaded Papers

Citations	Article
56	Multi-Omics Integration for the Design of Novel Therapies and the Identification of Novel Biomarkers by Tonci Ivanisevic and Raj N. Sewduth
34	Transforming Clinical Research: The Power of High-Throughput Omics Integration by Rui Vitorino
33	Potential Satellite Cell-Linked Biomarkers in Aging Skeletal Muscle Tissue: Proteomics and Proteogenomics to Monitor Sarcopenia by Diego Fernández-Lázaro, Evelina Garrosa, Jesús Seco-Calvo and Manuel Garrosa
32	Salivary Biomarkers in Oral Squamous Cell Carcinoma: A Proteomic Overview by Gabriele Riccardi, Mario Giuseppe Bellizzi, Irene Fatuzzo, Federica Zoccali, Luca Cavalcanti, Antonio Greco, Marco de Vincentiis, Massimo Ralli, Marco Fiore, Carla Petrella, Antonio Minni and Christian Barbato
20	Proteomics-Based Identification of Dysregulated Proteins in Breast Cancer by Anca-Narcisa Neagu, Madhuri Jayathirtha, Danielle Whitham, Panashe Mutsengi, Isabelle Sullivan, Brindusa Alina Petre and Costel C. Darie
18	Post-Translational Modifications in Histones and Their Role in Abiotic Stress Tolerance in Plants by Madhvi Sharma, Amanpreet K. Sidhu, Mahesh Kumar Samota, Mamta Gupta, Pushpendra Koli and Mukesh Choudhary
17	Metabolomics in Team-Sport Athletes: Current Knowledge, Challenges, and Future Perspectives by Tindaro Bongiovanni, Mathieu Lacome, Vassilios Fanos, Giulia Martera, Erika Cione and Roberto Cannataro
15	Proteomics-Based Identification of Dysregulated Proteins and Biomarker Discovery in Invasive Ductal Carcinoma, the Most Common Breast Cancer Subtype by Anca-Narcisa Neagu, Danielle Whitham, Logan Seymour, Norman Haaker, Isabella Pelkey and Costel C. Darie
15	Biomarkers in Ovarian Cancer: Towards Personalized Medicine by Carlos López-Portugués, María Montes-Bayón and Paula Díez
14	Algorithmically Reconstructed Molecular Pathways as the New Generation of Prognostic Molecular Biomarkers in Human Solid Cancers by Marianna Zolotovskaia, Maks Kovalenko, Polina Pugacheva, Victor Tkachev, Alexander Simonov, Maxim Sorokin, Alexander Seryakov, Andrew Garazha, Nurshat Gaifullin, Marina Sekacheva, Galina Zakharova and Anton A. Buzdin

Citations	Article
56	Multi-Omics Integration for the Design of Novel Therapies and the Identification of Novel Biomarkers by Tonci Ivanisevic and Raj N. Sewduth
34	Transforming Clinical Research: The Power of High-Throughput Omics Integration by Rui Vitorino
18	Post-Translational Modifications in Histones and Their Role in Abiotic Stress Tolerance in Plants by Madhvi Sharma, Amanpreet K. Sidhu, Mahesh Kumar Samota, Mamta Gupta, Pushpendra Koli and Mukesh Choudhary
15	Biomarkers in Ovarian Cancer: Towards Personalized Medicine by Carlos López-Portugués, María Montes-Bayón and Paula Díez
14	Algorithmically Reconstructed Molecular Pathways as the New Generation of Prognostic Molecular Biomarkers in Human Solid Cancers by Marianna Zolotovskaia, Maks Kovalenko, Polina Pugacheva, Victor Tkachev, Alexander Simonov, Maxim Sorokin, Alexander Seryakov, Andrew Garazha, Nurshat Gaifullin, Marina Sekacheva, Galina Zakharova and Anton A. Buzdin
12	Anti-Cancer Properties of Flaxseed Proteome by Yulia Merkher, Elizaveta Kontareva, Anastasia Alexandrova, Rajesha Javaraiah, Margarita Pustovalova and Sergey Leonov
10	Benefits of FAIMS to Improve the Proteome Coverage of Deteriorated and/or Cross-Linked TMT 10-Plex FFPE Tissue and Plasma-Derived Exosomes Samples by Ana Montero-Calle, María Garranzo-Asensio, Raquel Rejas-González, Jaime Feliu, Marta Mendiola, Alberto Peláez-García and Rodrigo Barderas
9	Proteomics-Driven Biomarkers in Pancreatic Cancer by Luís Ramalhete, Emanuel Vigia, Rúben Araújo and Hugo Pinto Marques
8	*Comparison of the Proteomes and Phosphoproteomes of S. cerevisiae* Cells Harvested with Different Strategies by Valentina Rossio and Joao A. Paulo**
7	Proteomics—The State of the Field: The Definition and Analysis of Proteomes Should Be Based in Reality, Not Convenience by Jens R. Coorssen and Matthew P. Padula

Citations	Article
34	Transforming Clinical Research: The Power of High-Throughput Omics Integration by Rui Vitorino
3	DNA Damage-Induced Ferroptosis: A Boolean Model Regulating p53 and Non-Coding RNAs in Drug Resistance by Shantanu Gupta, Daner A. Silveira, José Carlos M. Mombach and Ronaldo F. Hashimoto
3	Proteomic Comparison of Acute Myeloid Leukemia Cells and Normal CD34⁺ Bone Marrow Cells: Studies of Leukemia Cell Differentiation and Regulation of Iron Metabolism/Ferroptosis by Frode Selheim, Elise Aasebø, Håkon Reikvam, Øystein Bruserud and Maria Hernandez-Valladares
2	Towards Characterization of Hass Avocado Peel and Pulp Proteome during Postharvest Shelf Life by Carolina Camacho-Vázquez, José Miguel Elizalde-Contreras, Francisco Antonio Reyes-Soria, Juan Luis Monribot-Villanueva, José Antonio Guerrero-Analco, Janet Juarez-Escobar, Olinda Velázquez-López, Thuluz Meza-Menchaca, Esaú Bojórquez-Velázquez, Jesús Alejandro Zamora-Briseño, Monica Ramirez-Vazquez, Guadalupe Alheli González Barrenechea, Enrique Ibarra-Laclette and Eliel Ruiz-May
2	Circulating Factors as Potential Biomarkers of Cardiovascular Damage Progression Associated with Type 2 Diabetes by Giovanni Sartore, Francesco Piarulli, Eugenio Ragazzi, Alice Mallia, Stefania Ghilardi, Massimo Carollo, Annunziata Lapolla and Cristina Banfi
2	Phospho-Proteomics Analysis of Early Response to X-Ray Irradiation Reveals Molecular Mechanism Potentially Related to U251 Cell Radioresistance by Ousseynou Ben Diouf, Antoine Gilbert, Benoit Bernay, Randi G. Syljuåsen, Mihaela Tudor, Mihaela Temelie, Diana I. Savu, Mamadou Soumboundou, Cheikh Sall and François Chevalier
2	Proteomics of Extracellular Vesicles: Recent Updates, Challenges and Limitations by Mohini Singh, Prashant Kumar Tiwari, Vivek Kashyap and Sanjay Kumar
1	The Current Molecular and Cellular Landscape of Chronic Obstructive Pulmonary Disease (COPD): A Review of Therapies and Efforts towards Personalized Treatment by Luke A. Farrell, Matthew B. O’Rourke, Matthew P. Padula, Fernando Souza-Fonseca-Guimaraes, Gaetano Caramori, Peter A. B. Wark, Shymali C. Dharmage and Phillip M. Hansbro
1	Investigating the Prognostic Potential of Plasma ST2 in Patients with Peripheral Artery Disease: Identification and Evaluation by Ben Li, Farah Shaikh, Abdelrahman Zamzam, Rawand Abdin and Mohammad Qadura
1	Protein Extraction Methods Suitable for Muscle Tissue Proteomic Analysis by Lorenza Vantaggiato, Claudia Landi, Enxhi Shaba, Daniela Rossi, Vincenzo Sorrentino and Luca Bini

Citations	Article
3	Proteomic Comparison of Acute Myeloid Leukemia Cells and Normal CD34⁺ Bone Marrow Cells: Studies of Leukemia Cell Differentiation and Regulation of Iron Metabolism/Ferroptosis by Frode Selheim, Elise Aasebø, Håkon Reikvam, Øystein Bruserud and Maria Hernandez-Valladares
2	Proteomics of Extracellular Vesicles: Recent Updates, Challenges and Limitations by Mohini Singh, Prashant Kumar Tiwari, Vivek Kashyap and Sanjay Kumar
1	Cell-Type-Specific Heat-Induced Changes in the Proteomes of Pollen Mother Cells and Microspores Provide New Insights into Tomato Pollen Production Under Elevated Temperature by Priya Thapa, Jun Guo, Kajol Pradhan, Dibya Thapa, Sudhakar Madhavarapu, Jing Zou, Jesse Potts, Hui Li, Joshua O’Hair, Chen Wang, Suping Zhou, Yong Yang, Tara Fish and Theodore W. Thannhauser
1	Oxidative Stress and Its Role in the Emergence and Progression of Myelodysplastic Syndromes: Insights from Proteomic Analysis and Other Methodologies by Anastasia Boura-Theodorou, Konstantina Psatha, Stefania Maniatsi, Areti Kourti, Georgia Kaiafa, Michalis Aivaliotis and Kali Makedou

Citations	Article
243	A Critical Review of Bottom-Up Proteomics: The Good, the Bad, and the Future of This Field by Emmalyn J. Dupree, Madhuri Jayathirtha, Hannah Yorkey, Marius Mihasan, Brindusa Alina Petre and Costel C. Darie
184	Proteome Discoverer—A Community Enhanced Data Processing Suite for Protein Informatics by Benjamin C. Orsburn
151	“Omics”-Informed Drug and Biomarker Discovery: Opportunities, Challenges and Future Perspectives by Holly Matthews, James Hanison and Niroshini Nirmalan
125	Transcription Factor Functional Protein-Protein Interactions in Plant Defense Responses by Murilo S. Alves, Silvana P. Dadalto, Amanda B. Gonçalves, Gilza B. De Souza, Vanessa A. Barros and Luciano G. Fietto
123	Milk-Derived Extracellular Vesicles in Inter-Organism, Cross-Species Communication and Drug Delivery by Rahul Sanwlani, Pamali Fonseka, Sai V. Chitti and Suresh Mathivanan
119	Personalized Proteomics: The Future of Precision Medicine by Trevor T. Duarte and Charles T. Spencer
102	Applications of Proteomics in Ovarian Cancer: Dawn of a New Era by Aruni Ghose, Sri Vidya Niharika Gullapalli, Naila Chohan, Anita Bolina, Michele Moschetta, Elie Rassy and Stergios Boussios
86	Isoelectric Point Separations of Peptides and Proteins by Melissa R. Pergande and Stephanie M. Cologna
77	Proteome Profiling of Exosomes Purified from a Small Amount of Human Serum: The Problem of Co-Purified Serum Components by Mateusz Smolarz, Monika Pietrowska, Natalia Matysiak, Łukasz Mielańczyk and Piotr Widłak
77	Proteomes Are of Proteoforms: Embracing the Complexity by Katrina Carbonara, Martin Andonovski and Jens R. Coorssen

More Articles...

Views	Article
9652	Multi-Omics Integration for the Design of Novel Therapies and the Identification of Novel Biomarkers by Tonci Ivanisevic and Raj N. Sewduth
8021	Transforming Clinical Research: The Power of High-Throughput Omics Integration by Rui Vitorino
7852	Biomarkers in Ovarian Cancer: Towards Personalized Medicine by Carlos López-Portugués, María Montes-Bayón and Paula Díez
7385	Optimization of a Protocol for Protein Extraction from Calcified Aortic Valves for Proteomics Applications: Development of a Standard Operating Procedure by Fábio Trindade, Ana F. Ferreira, Francisca Saraiva, Diana Martins, Vera M. Mendes, Carla Sousa, Cristina Gavina, Adelino Leite-Moreira, Bruno Manadas, Inês Falcão-Pires and Rui Vitorino
7209	Advancements in Oncoproteomics Technologies: Treading toward Translation into Clinical Practice by Ankita Punetha and Deepak Kotiya
7007	Spatial Proteomics for the Molecular Characterization of Breast Cancer by Klára Brožová, Brigitte Hantusch, Lukas Kenner and Klaus Kratochwill
6321	Potential Satellite Cell-Linked Biomarkers in Aging Skeletal Muscle Tissue: Proteomics and Proteogenomics to Monitor Sarcopenia by Diego Fernández-Lázaro, Evelina Garrosa, Jesús Seco-Calvo and Manuel Garrosa
6300	Proteomics-Based Identification of Dysregulated Proteins in Breast Cancer by Anca-Narcisa Neagu, Madhuri Jayathirtha, Danielle Whitham, Panashe Mutsengi, Isabelle Sullivan, Brindusa Alina Petre and Costel C. Darie
6245	Proteomic Discovery and Validation of Novel Fluid Biomarkers for Improved Patient Selection and Prediction of Clinical Outcomes in Alzheimer’s Disease Patient Cohorts by Shivangi Awasthi, Daniel S. Spellman and Nathan G. Hatcher
5910	Salivary Biomarkers in Oral Squamous Cell Carcinoma: A Proteomic Overview by Gabriele Riccardi, Mario Giuseppe Bellizzi, Irene Fatuzzo, Federica Zoccali, Luca Cavalcanti, Antonio Greco, Marco de Vincentiis, Massimo Ralli, Marco Fiore, Carla Petrella, Antonio Minni and Christian Barbato

Views	Article
9652	Multi-Omics Integration for the Design of Novel Therapies and the Identification of Novel Biomarkers by Tonci Ivanisevic and Raj N. Sewduth
8021	Transforming Clinical Research: The Power of High-Throughput Omics Integration by Rui Vitorino
7852	Biomarkers in Ovarian Cancer: Towards Personalized Medicine by Carlos López-Portugués, María Montes-Bayón and Paula Díez
5517	Post-Translational Modifications in Histones and Their Role in Abiotic Stress Tolerance in Plants by Madhvi Sharma, Amanpreet K. Sidhu, Mahesh Kumar Samota, Mamta Gupta, Pushpendra Koli and Mukesh Choudhary
5409	Proteomics-Driven Biomarkers in Pancreatic Cancer by Luís Ramalhete, Emanuel Vigia, Rúben Araújo and Hugo Pinto Marques
5365	Unveiling the Molecular Footprint: Proteome-Based Biomarkers for Alzheimer’s Disease by Mukul Jain, Rupal Dhariwal, Nil Patil, Sandhya Ojha, Reshma Tendulkar, Mugdha Tendulkar, Parmdeep Singh Dhanda, Alpa Yadav and Prashant Kaushik
5229	Proteomics—The State of the Field: The Definition and Analysis of Proteomes Should Be Based in Reality, Not Convenience by Jens R. Coorssen and Matthew P. Padula
5216	Plasma and Kidney Proteome Profiling Combined with Laser Capture Microdissection Reveal Large Increases in Immunoglobulins with Age by Leanne J. G. Chan, Niclas Olsson, Magdalena Preciado López, Kayley Hake, Haruna Tomono, Matthew A. Veras and Fiona E. McAllister
5045	Identification of Plasma Biomarkers from Rheumatoid Arthritis Patients Using an Optimized Sequential Window Acquisition of All THeoretical Mass Spectra (SWATH) Proteomics Workflow by Liang Jin, Fei Wang, Xue Wang, Bohdan P. Harvey, Yingtao Bi, Chenqi Hu, Baoliang Cui, Anhdao T. Darcy, John W. Maull, Ben R. Phillips, Youngjae Kim, Gary J. Jenkins, Thierry R. Sornasse and Yu Tian
4841	Anti-Cancer Properties of Flaxseed Proteome by Yulia Merkher, Elizaveta Kontareva, Anastasia Alexandrova, Rajesha Javaraiah, Margarita Pustovalova and Sergey Leonov

Views	Article
8021	Transforming Clinical Research: The Power of High-Throughput Omics Integration by Rui Vitorino
4834	The Current Molecular and Cellular Landscape of Chronic Obstructive Pulmonary Disease (COPD): A Review of Therapies and Efforts towards Personalized Treatment by Luke A. Farrell, Matthew B. O’Rourke, Matthew P. Padula, Fernando Souza-Fonseca-Guimaraes, Gaetano Caramori, Peter A. B. Wark, Shymali C. Dharmage and Phillip M. Hansbro
4180	Protein Extraction Methods Suitable for Muscle Tissue Proteomic Analysis by Lorenza Vantaggiato, Claudia Landi, Enxhi Shaba, Daniela Rossi, Vincenzo Sorrentino and Luca Bini
4007	Proteomics of Extracellular Vesicles: Recent Updates, Challenges and Limitations by Mohini Singh, Prashant Kumar Tiwari, Vivek Kashyap and Sanjay Kumar
3931	Assessment of Data-Independent Acquisition Mass Spectrometry (DIA-MS) for the Identification of Single Amino Acid Variants by Ivo Fierro-Monti, Klemens Fröhlich, Christian Schori and Alexander Schmidt
3545	Integrative Spatial Proteomics and Single-Cell RNA Sequencing Unveil Molecular Complexity in Rheumatoid Arthritis for Novel Therapeutic Targeting by Xue Wang, Fei Wang, Archana S. Iyer, Heather Knight, Lori J. Duggan, Yingli Yang, Liang Jin, Baoliang Cui, Yupeng He, Jan Schejbal, Lucy A. Phillips, Bohdan P. Harvey, Sílvia Sisó and Yu Tian
3479	DNA Damage-Induced Ferroptosis: A Boolean Model Regulating p53 and Non-Coding RNAs in Drug Resistance by Shantanu Gupta, Daner A. Silveira, José Carlos M. Mombach and Ronaldo F. Hashimoto
2957	Novel Integration of Spatial and Single-Cell Omics Data Sets Enables Deeper Insights into IPF Pathogenesis by Fei Wang, Liang Jin, Xue Wang, Baoliang Cui, Yingli Yang, Lori Duggan, Annette Schwartz Sterman, Sarah M. Lloyd, Lisa A. Hazelwood, Neha Chaudhary, Bhupinder Bawa, Lucy A. Phillips, Yupeng He and Yu Tian
2683	Multi-Omic Approaches in Cancer-Related Micropeptide Identification by Katarina Vrbnjak and Raj Nayan Sewduth
2532	Towards Characterization of Hass Avocado Peel and Pulp Proteome during Postharvest Shelf Life by Carolina Camacho-Vázquez, José Miguel Elizalde-Contreras, Francisco Antonio Reyes-Soria, Juan Luis Monribot-Villanueva, José Antonio Guerrero-Analco, Janet Juarez-Escobar, Olinda Velázquez-López, Thuluz Meza-Menchaca, Esaú Bojórquez-Velázquez, Jesús Alejandro Zamora-Briseño, Monica Ramirez-Vazquez, Guadalupe Alheli González Barrenechea, Enrique Ibarra-Laclette and Eliel Ruiz-May

Views	Article
4007	Proteomics of Extracellular Vesicles: Recent Updates, Challenges and Limitations by Mohini Singh, Prashant Kumar Tiwari, Vivek Kashyap and Sanjay Kumar
3545	Integrative Spatial Proteomics and Single-Cell RNA Sequencing Unveil Molecular Complexity in Rheumatoid Arthritis for Novel Therapeutic Targeting by Xue Wang, Fei Wang, Archana S. Iyer, Heather Knight, Lori J. Duggan, Yingli Yang, Liang Jin, Baoliang Cui, Yupeng He, Jan Schejbal, Lucy A. Phillips, Bohdan P. Harvey, Sílvia Sisó and Yu Tian
1818	Proteomic Comparison of Acute Myeloid Leukemia Cells and Normal CD34⁺ Bone Marrow Cells: Studies of Leukemia Cell Differentiation and Regulation of Iron Metabolism/Ferroptosis by Frode Selheim, Elise Aasebø, Håkon Reikvam, Øystein Bruserud and Maria Hernandez-Valladares
1571	Differential Signaling Pathways Identified in Aqueous Humor, Anterior Capsule, and Crystalline Lens of Age-Related, Diabetic, and Post-Vitrectomy Cataract by Christina Karakosta, Martina Samiotaki, Anastasios Bisoukis, Konstantinos I. Bougioukas, George Panayotou, Dimitrios Papaconstantinou and Marilita M. Moschos
1552	*Identifying Endogenous Proteins of Perennial Ryegrass (Lolium perenne) with Ex Vivo* Antioxidant Activity by Kathrine Danner Aakjær Pedersen, Line Thopholm Andersen, Mads Heiselberg, Camilla Agerskov Brigsted, Freja Lyngs Støvring, Louise Mailund Mikkelsen, Sofie Albrekt Hansen, Christian Enrico Rusbjerg-Weberskov, Mette Lübeck and Simon Gregersen Echers**
1516	Systems Biology of Recombinant 2G12 and 353/11 mAb Production in CHO-K1 Cell Lines at Phosphoproteome Level by Eldi Sulaj, Felix L. Sandell, Linda Schwaigerlehner, Gorji Marzban, Juliane C. Dohm and Renate Kunert
1450	Intrinsic Disorder and Phase Separation Coordinate Exocytosis, Motility, and Chromatin Remodeling in the Human Acrosomal Proteome by Shivam Shukla, Sean S. Lastorka and Vladimir N. Uversky
1388	Role of LIN28B in the Regulation of Ribosomal Biogenesis and Lipid Metabolism in Medulloblastoma Brain Cancer Cells by Ahmed Maklad, Mohammed Sedeeq, Kaveh Baghaei, Richard Wilson, John A. Heath, Nuri Gueven and Iman Azimi
1381	*Unraveling the Central Role of Global Regulator PprI in Deinococcus radiodurans* Through Label-Free Quantitative Proteomics by Siyu Zhu, Feng Liu, Hao Wang and Yongqian Zhang**
1289	Comparative Label-Based Proteomics of Venoms from Echis ocellatus, Naja nigricollis, and Bitis arietans by Abdulbaki Alfa-Ibrahim Adio, Samuel Odo Uko, Jiddah Muhammad Lawal, Ibrahim Malami, Nafiu Lawal, Amina Jega Yusuf Jega, Bilyaminu Abubakar, Muhammad Bashir Bello, Kasimu Ghandi Ibrahim, Murtala Bello Abubakar, Abdussamad Muhammad Abdussamad, Mujtaba Sulaiman Abubakar and Mustapha Umar Imam

Views	Article
37600	A Critical Review of Bottom-Up Proteomics: The Good, the Bad, and the Future of This Field by Emmalyn J. Dupree, Madhuri Jayathirtha, Hannah Yorkey, Marius Mihasan, Brindusa Alina Petre and Costel C. Darie
23598	Isoelectric Point Separations of Peptides and Proteins by Melissa R. Pergande and Stephanie M. Cologna
18705	Transcription Factor Functional Protein-Protein Interactions in Plant Defense Responses by Murilo S. Alves, Silvana P. Dadalto, Amanda B. Gonçalves, Gilza B. De Souza, Vanessa A. Barros and Luciano G. Fietto
18402	“Omics”-Informed Drug and Biomarker Discovery: Opportunities, Challenges and Future Perspectives by Holly Matthews, James Hanison and Niroshini Nirmalan
15869	Comparative and Quantitative Global Proteomics Approaches: An Overview by Barbara Deracinois, Christophe Flahaut, Sophie Duban-Deweer and Yannis Karamanos
15643	Exosomal Proteome Profiling: A Potential Multi-Marker Cellular Phenotyping Tool to Characterize Hypoxia-Induced Radiation Resistance in Breast Cancer by Stefani N. Thomas, Zhongping Liao, David Clark, Yangyi Chen, Ramin Samadani, Li Mao, David K. Ann, Janet E. Baulch, Paul Shapiro and Austin J. Yang
14233	What is Normalization? The Strategies Employed in Top-Down and Bottom-Up Proteome Analysis Workflows by Matthew B. O’Rourke, Stephanie E. L. Town, Penelope V. Dalla, Fiona Bicknell, Naomi Koh Belic, Jake P. Violi, Joel R. Steele and Matthew P. Padula
14102	Comparative Skeletal Muscle Proteomics Using Two-Dimensional Gel Electrophoresis by Sandra Murphy, Paul Dowling and Kay Ohlendieck
13925	The Cutting Edge of Affinity Electrophoresis Technology by Eiji Kinoshita, Emiko Kinoshita-Kikuta and Tohru Koike
13445	Plant Cell Wall Proteins: A Large Body of Data, but What about Runaways? by Cécile Albenne, Hervé Canut, Laurent Hoffmann and Elisabeth Jamet

More Articles...

Downloads	Article
4279	Anti-Cancer Properties of Flaxseed Proteome by Yulia Merkher, Elizaveta Kontareva, Anastasia Alexandrova, Rajesha Javaraiah, Margarita Pustovalova and Sergey Leonov
3033	Potential Satellite Cell-Linked Biomarkers in Aging Skeletal Muscle Tissue: Proteomics and Proteogenomics to Monitor Sarcopenia by Diego Fernández-Lázaro, Evelina Garrosa, Jesús Seco-Calvo and Manuel Garrosa
2282	Salivary Biomarkers in Oral Squamous Cell Carcinoma: A Proteomic Overview by Gabriele Riccardi, Mario Giuseppe Bellizzi, Irene Fatuzzo, Federica Zoccali, Luca Cavalcanti, Antonio Greco, Marco de Vincentiis, Massimo Ralli, Marco Fiore, Carla Petrella, Antonio Minni and Christian Barbato
2081	Multi-Omics Integration for the Design of Novel Therapies and the Identification of Novel Biomarkers by Tonci Ivanisevic and Raj N. Sewduth
1791	Spatial Proteomics for the Molecular Characterization of Breast Cancer by Klára Brožová, Brigitte Hantusch, Lukas Kenner and Klaus Kratochwill
1693	Proteomics-Based Identification of Dysregulated Proteins in Breast Cancer by Anca-Narcisa Neagu, Madhuri Jayathirtha, Danielle Whitham, Panashe Mutsengi, Isabelle Sullivan, Brindusa Alina Petre and Costel C. Darie
1660	Metabolomics in Team-Sport Athletes: Current Knowledge, Challenges, and Future Perspectives by Tindaro Bongiovanni, Mathieu Lacome, Vassilios Fanos, Giulia Martera, Erika Cione and Roberto Cannataro
1571	Biomarkers in Ovarian Cancer: Towards Personalized Medicine by Carlos López-Portugués, María Montes-Bayón and Paula Díez
1523	Proteomic Applications in Aquatic Environment Studies by Nadeeka Thushari Gajahin Gamage, Rina Miyashita, Kazutaka Takahashi, Shuichi Asakawa and Jayan Duminda Mahesh Senevirathna
1513	Post-Translational Modifications in Histones and Their Role in Abiotic Stress Tolerance in Plants by Madhvi Sharma, Amanpreet K. Sidhu, Mahesh Kumar Samota, Mamta Gupta, Pushpendra Koli and Mukesh Choudhary

Downloads	Article
4279	Anti-Cancer Properties of Flaxseed Proteome by Yulia Merkher, Elizaveta Kontareva, Anastasia Alexandrova, Rajesha Javaraiah, Margarita Pustovalova and Sergey Leonov
2081	Multi-Omics Integration for the Design of Novel Therapies and the Identification of Novel Biomarkers by Tonci Ivanisevic and Raj N. Sewduth
1571	Biomarkers in Ovarian Cancer: Towards Personalized Medicine by Carlos López-Portugués, María Montes-Bayón and Paula Díez
1513	Post-Translational Modifications in Histones and Their Role in Abiotic Stress Tolerance in Plants by Madhvi Sharma, Amanpreet K. Sidhu, Mahesh Kumar Samota, Mamta Gupta, Pushpendra Koli and Mukesh Choudhary
1425	The Mechanisms of Regulated Cell Death: Structural and Functional Proteomic Pathways Induced or Inhibited by a Specific Protein—A Narrative Review by Diego Fernández-Lázaro, Begoña Sanz and Jesús Seco-Calvo
1284	Proteomics—The State of the Field: The Definition and Analysis of Proteomes Should Be Based in Reality, Not Convenience by Jens R. Coorssen and Matthew P. Padula
1283	Proteomics-Driven Biomarkers in Pancreatic Cancer by Luís Ramalhete, Emanuel Vigia, Rúben Araújo and Hugo Pinto Marques
1205	Transforming Clinical Research: The Power of High-Throughput Omics Integration by Rui Vitorino
1108	Unveiling the Molecular Footprint: Proteome-Based Biomarkers for Alzheimer’s Disease by Mukul Jain, Rupal Dhariwal, Nil Patil, Sandhya Ojha, Reshma Tendulkar, Mugdha Tendulkar, Parmdeep Singh Dhanda, Alpa Yadav and Prashant Kaushik
998	Identification of Plasma Biomarkers from Rheumatoid Arthritis Patients Using an Optimized Sequential Window Acquisition of All THeoretical Mass Spectra (SWATH) Proteomics Workflow by Liang Jin, Fei Wang, Xue Wang, Bohdan P. Harvey, Yingtao Bi, Chenqi Hu, Baoliang Cui, Anhdao T. Darcy, John W. Maull, Ben R. Phillips, Youngjae Kim, Gary J. Jenkins, Thierry R. Sornasse and Yu Tian

Downloads	Article
1205	Transforming Clinical Research: The Power of High-Throughput Omics Integration by Rui Vitorino
998	The Current Molecular and Cellular Landscape of Chronic Obstructive Pulmonary Disease (COPD): A Review of Therapies and Efforts towards Personalized Treatment by Luke A. Farrell, Matthew B. O’Rourke, Matthew P. Padula, Fernando Souza-Fonseca-Guimaraes, Gaetano Caramori, Peter A. B. Wark, Shymali C. Dharmage and Phillip M. Hansbro
890	DNA Damage-Induced Ferroptosis: A Boolean Model Regulating p53 and Non-Coding RNAs in Drug Resistance by Shantanu Gupta, Daner A. Silveira, José Carlos M. Mombach and Ronaldo F. Hashimoto
843	Novel Integration of Spatial and Single-Cell Omics Data Sets Enables Deeper Insights into IPF Pathogenesis by Fei Wang, Liang Jin, Xue Wang, Baoliang Cui, Yingli Yang, Lori Duggan, Annette Schwartz Sterman, Sarah M. Lloyd, Lisa A. Hazelwood, Neha Chaudhary, Bhupinder Bawa, Lucy A. Phillips, Yupeng He and Yu Tian
816	Assessment of Data-Independent Acquisition Mass Spectrometry (DIA-MS) for the Identification of Single Amino Acid Variants by Ivo Fierro-Monti, Klemens Fröhlich, Christian Schori and Alexander Schmidt
804	Multi-Omic Approaches in Cancer-Related Micropeptide Identification by Katarina Vrbnjak and Raj Nayan Sewduth
748	Circulating Factors as Potential Biomarkers of Cardiovascular Damage Progression Associated with Type 2 Diabetes by Giovanni Sartore, Francesco Piarulli, Eugenio Ragazzi, Alice Mallia, Stefania Ghilardi, Massimo Carollo, Annunziata Lapolla and Cristina Banfi
721	Protein Extraction Methods Suitable for Muscle Tissue Proteomic Analysis by Lorenza Vantaggiato, Claudia Landi, Enxhi Shaba, Daniela Rossi, Vincenzo Sorrentino and Luca Bini
715	Transcriptomics Revealed Differentially Expressed Transcription Factors and MicroRNAs in Human Diabetic Foot Ulcers by Vikrant Rai
680	Proteomics of Extracellular Vesicles: Recent Updates, Challenges and Limitations by Mohini Singh, Prashant Kumar Tiwari, Vivek Kashyap and Sanjay Kumar

Downloads	Article
680	Proteomics of Extracellular Vesicles: Recent Updates, Challenges and Limitations by Mohini Singh, Prashant Kumar Tiwari, Vivek Kashyap and Sanjay Kumar
543	Proteomic Comparison of Acute Myeloid Leukemia Cells and Normal CD34⁺ Bone Marrow Cells: Studies of Leukemia Cell Differentiation and Regulation of Iron Metabolism/Ferroptosis by Frode Selheim, Elise Aasebø, Håkon Reikvam, Øystein Bruserud and Maria Hernandez-Valladares
458	Intrinsic Disorder and Phase Separation Coordinate Exocytosis, Motility, and Chromatin Remodeling in the Human Acrosomal Proteome by Shivam Shukla, Sean S. Lastorka and Vladimir N. Uversky
450	Differential Signaling Pathways Identified in Aqueous Humor, Anterior Capsule, and Crystalline Lens of Age-Related, Diabetic, and Post-Vitrectomy Cataract by Christina Karakosta, Martina Samiotaki, Anastasios Bisoukis, Konstantinos I. Bougioukas, George Panayotou, Dimitrios Papaconstantinou and Marilita M. Moschos
403	*Identifying Endogenous Proteins of Perennial Ryegrass (Lolium perenne) with Ex Vivo* Antioxidant Activity by Kathrine Danner Aakjær Pedersen, Line Thopholm Andersen, Mads Heiselberg, Camilla Agerskov Brigsted, Freja Lyngs Støvring, Louise Mailund Mikkelsen, Sofie Albrekt Hansen, Christian Enrico Rusbjerg-Weberskov, Mette Lübeck and Simon Gregersen Echers**
379	Systems Biology of Recombinant 2G12 and 353/11 mAb Production in CHO-K1 Cell Lines at Phosphoproteome Level by Eldi Sulaj, Felix L. Sandell, Linda Schwaigerlehner, Gorji Marzban, Juliane C. Dohm and Renate Kunert
363	Cell-Type-Specific Heat-Induced Changes in the Proteomes of Pollen Mother Cells and Microspores Provide New Insights into Tomato Pollen Production Under Elevated Temperature by Priya Thapa, Jun Guo, Kajol Pradhan, Dibya Thapa, Sudhakar Madhavarapu, Jing Zou, Jesse Potts, Hui Li, Joshua O’Hair, Chen Wang, Suping Zhou, Yong Yang, Tara Fish and Theodore W. Thannhauser
356	Role of LIN28B in the Regulation of Ribosomal Biogenesis and Lipid Metabolism in Medulloblastoma Brain Cancer Cells by Ahmed Maklad, Mohammed Sedeeq, Kaveh Baghaei, Richard Wilson, John A. Heath, Nuri Gueven and Iman Azimi
355	Integrative Spatial Proteomics and Single-Cell RNA Sequencing Unveil Molecular Complexity in Rheumatoid Arthritis for Novel Therapeutic Targeting by Xue Wang, Fei Wang, Archana S. Iyer, Heather Knight, Lori J. Duggan, Yingli Yang, Liang Jin, Baoliang Cui, Yupeng He, Jan Schejbal, Lucy A. Phillips, Bohdan P. Harvey, Sílvia Sisó and Yu Tian
331	Knowledge Discovery in Databases of Proteomics by Systems Modeling in Translational Research on Pancreatic Cancer by Mathilde Resell, Elisabeth Pimpisa Graarud, Hanne-Line Rabben, Animesh Sharma, Lars Hagen, Linh Hoang, Nan T. Skogaker, Anne Aarvik, Magnus K. Svensson, Manoj Amrutkar, Caroline S. Verbeke, Surinder K. Batra, Gunnar Qvigstad, Timothy C. Wang, Anil Rustgi, Duan Chen and Chun-Mei Zhao

Downloads	Article
15382	Isoelectric Point Separations of Peptides and Proteins by Melissa R. Pergande and Stephanie M. Cologna
10034	Exosomal Proteome Profiling: A Potential Multi-Marker Cellular Phenotyping Tool to Characterize Hypoxia-Induced Radiation Resistance in Breast Cancer by Stefani N. Thomas, Zhongping Liao, David Clark, Yangyi Chen, Ramin Samadani, Li Mao, David K. Ann, Janet E. Baulch, Paul Shapiro and Austin J. Yang
9288	Transcription Factor Functional Protein-Protein Interactions in Plant Defense Responses by Murilo S. Alves, Silvana P. Dadalto, Amanda B. Gonçalves, Gilza B. De Souza, Vanessa A. Barros and Luciano G. Fietto
9003	A Critical Review of Bottom-Up Proteomics: The Good, the Bad, and the Future of This Field by Emmalyn J. Dupree, Madhuri Jayathirtha, Hannah Yorkey, Marius Mihasan, Brindusa Alina Petre and Costel C. Darie
8280	A Comprehensive Guide for Performing Sample Preparation and Top-Down Protein Analysis by Matthew P. Padula, Iain J. Berry, Matthew B. O′Rourke, Benjamin B.A. Raymond, Jerran Santos and Steven P. Djordjevic
8247	Proteome Profiling of Exosomes Purified from a Small Amount of Human Serum: The Problem of Co-Purified Serum Components by Mateusz Smolarz, Monika Pietrowska, Natalia Matysiak, Łukasz Mielańczyk and Piotr Widłak
8223	*The Secretome and N-Glycosylation Profiles of the Charophycean Green Alga, Penium margaritaceum, Resemble Those of Embryophytes* by Eliel Ruiz-May, Iben Sørensen, Zhangjun Fei, Sheng Zhang, David S. Domozych and Jocelyn K. C. Rose
8035	What is Normalization? The Strategies Employed in Top-Down and Bottom-Up Proteome Analysis Workflows by Matthew B. O’Rourke, Stephanie E. L. Town, Penelope V. Dalla, Fiona Bicknell, Naomi Koh Belic, Jake P. Violi, Joel R. Steele and Matthew P. Padula
6556	Comparative and Quantitative Global Proteomics Approaches: An Overview by Barbara Deracinois, Christophe Flahaut, Sophie Duban-Deweer and Yannis Karamanos
5953	Disseminating Metaproteomic Informatics Capabilities and Knowledge Using the Galaxy-P Framework by Clemens Blank, Caleb Easterly, Bjoern Gruening, James Johnson, Carolin A. Kolmeder, Praveen Kumar, Damon May, Subina Mehta, Bart Mesuere, Zachary Brown, Joshua E. Elias, W. Judson Hervey, Thomas McGowan, Thilo Muth, Brook L. Nunn, Joel Rudney, Alessandro Tanca, Timothy J. Griffin and Pratik D. Jagtap

Back to TopTop