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Most Cited

  • Review
  • Open Access
85 Citations
12,430 Views
14 Pages

20 October 2023

Multi-omics is a cutting-edge approach that combines data from different biomolecular levels, such as DNA, RNA, proteins, metabolites, and epigenetic marks, to obtain a holistic view of how living systems work and interact. Multi-omics has been used...

  • Review
  • Open Access
79 Citations
11,622 Views
30 Pages

6 September 2024

High-throughput omics technologies have dramatically changed biological research, providing unprecedented insights into the complexity of living systems. This review presents a comprehensive examination of the current landscape of high-throughput omi...

  • Review
  • Open Access
32 Citations
6,918 Views
29 Pages

Post-Translational Modifications in Histones and Their Role in Abiotic Stress Tolerance in Plants

  • Madhvi Sharma,
  • Amanpreet K. Sidhu,
  • Mahesh Kumar Samota,
  • Mamta Gupta,
  • Pushpendra Koli and
  • Mukesh Choudhary

22 November 2023

Abiotic stresses profoundly alter plant growth and development, resulting in yield losses. Plants have evolved adaptive mechanisms to combat these challenges, triggering intricate molecular responses to maintain tissue hydration and temperature stabi...

  • Review
  • Open Access
22 Citations
9,990 Views
19 Pages

Biomarkers in Ovarian Cancer: Towards Personalized Medicine

  • Carlos López-Portugués,
  • María Montes-Bayón and
  • Paula Díez

Ovarian cancer is one of the deadliest cancers in women. The lack of specific symptoms, especially at the initial stages of disease development, together with the malignancy heterogeneity, lower the life expectancy of patients. Aiming to improve surv...

  • Review
  • Open Access
19 Citations
6,541 Views
25 Pages

Proteomics-Based Identification of Dysregulated Proteins and Biomarker Discovery in Invasive Ductal Carcinoma, the Most Common Breast Cancer Subtype

  • Anca-Narcisa Neagu,
  • Danielle Whitham,
  • Logan Seymour,
  • Norman Haaker,
  • Isabella Pelkey and
  • Costel C. Darie

Invasive ductal carcinoma (IDC) is the most common histological subtype of malignant breast cancer (BC), and accounts for 70–80% of all invasive BCs. IDC demonstrates great heterogeneity in clinical and histopathological characteristics, progno...

  • Article
  • Open Access
16 Citations
5,371 Views
14 Pages

Comparison of Four Purification Methods on Serum Extracellular Vesicle Recovery, Size Distribution, and Proteomics

  • Dianny Elizabeth Jimenez,
  • Muhammad Tahir,
  • Muhammad Faheem,
  • Wellington Bruno dos Santos Alves,
  • Barbara de Lucena Correa,
  • Gabriel Rocha de Andrade,
  • Martin R. Larsen,
  • Getulio Pereira de Oliveira and
  • Rinaldo Wellerson Pereira

In recent decades, the role played by extracellular vesicles in physiological and pathological processes has attracted attention. Extracellular vesicles are released by different types of cells and carry molecules that could become biomarkers for the...

  • Perspective
  • Open Access
16 Citations
6,465 Views
24 Pages

With growing recognition and acknowledgement of the genuine complexity of proteomes, we are finally entering the post-proteogenomic era. Routine assessment of proteomes as inferred correlates of gene sequences (i.e., canonical ‘proteins’)...

  • Article
  • Open Access
14 Citations
2,955 Views
25 Pages

Algorithmically Reconstructed Molecular Pathways as the New Generation of Prognostic Molecular Biomarkers in Human Solid Cancers

  • Marianna Zolotovskaia,
  • Maks Kovalenko,
  • Polina Pugacheva,
  • Victor Tkachev,
  • Alexander Simonov,
  • Maxim Sorokin,
  • Alexander Seryakov,
  • Andrew Garazha,
  • Nurshat Gaifullin and
  • Anton A. Buzdin
  • + 2 authors

Individual gene expression and molecular pathway activation profiles were shown to be effective biomarkers in many cancers. Here, we used the human interactome model to algorithmically build 7470 molecular pathways centered around individual gene pro...

  • Review
  • Open Access
14 Citations
6,420 Views
23 Pages

Anti-Cancer Properties of Flaxseed Proteome

  • Yulia Merkher,
  • Elizaveta Kontareva,
  • Anastasia Alexandrova,
  • Rajesha Javaraiah,
  • Margarita Pustovalova and
  • Sergey Leonov

16 November 2023

Flaxseed has been recognized as a valuable source of nutrients and bioactive compounds, including proteins that possess various health benefits. In recent years, studies have shown that flaxseed proteins, including albumins, globulins, glutelin, and...

  • Article
  • Open Access
13 Citations
4,564 Views
26 Pages

Benefits of FAIMS to Improve the Proteome Coverage of Deteriorated and/or Cross-Linked TMT 10-Plex FFPE Tissue and Plasma-Derived Exosomes Samples

  • Ana Montero-Calle,
  • María Garranzo-Asensio,
  • Raquel Rejas-González,
  • Jaime Feliu,
  • Marta Mendiola,
  • Alberto Peláez-García and
  • Rodrigo Barderas

24 October 2023

The proteome characterization of complex, deteriorated, or cross-linked protein mixtures as paired clinical FFPE or exosome samples isolated from low plasma volumes (250 µL) might be a challenge. In this work, we aimed at investigating the bene...

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Proteomes - ISSN 2227-7382