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Microbiology Research, Volume 17, Issue 2

2026 February - 17 articles

Cover Story: The global rise of multidrug resistance (MDR) across bacterial pathogens poses a severe threat to public health, with the food chain serving as a critical reservoir and transmission route for resistant clones. This study investigated the genomic epidemiology of Staphylococcus aureus in retail pork from Beijing, China, and Copenhagen, Denmark, with a focus on MDR patterns and associated genetic elements. The findings highlight retail meat as an important reservoir for MDR S. aureus and illustrate how livestock-adapted clones contribute to the environmental burden of antimicrobial resistance. This study underscores the need for integrated One Health surveillance that connects veterinary, food safety, and human health sectors to monitor and contain the spread of MDR bacteria across ecological niches. View this paper
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Articles (17)

  • Article
  • Open Access
1,395 Views
10 Pages

Fungi from the Depths: A Preliminary Survey Using Hybrid Underwater Robotics in the Bathypelagic Zone off the Coast of Toulon (SE France)

  • Michael De Benedetto,
  • Grazia Cecchi,
  • Laura Cutroneo,
  • Simone Di Piazza and ,
  • Vincent Bertin,
  • Marco Capello and
  • Mirca Zotti
  • + 2 authors+ 0 author

The deep sea is characterized by unique and extreme habitats. The absence of light, high salinity, hydrostatic pressure, low temperature, and high competition led to the evolution of physiological and biochemical adaptations necessary for survival. M...

  • Communication
  • Open Access
1 Citations
2,009 Views
9 Pages

Background: The spike D614G substitution became globally dominant early in the COVID-19 pandemic, and reversion to ancestral D614 is expected to be rare once D614G is fixed. SARS-CoV-2 sequences lacking D614G detected later raise questions about the...

(This article belongs to the Special Issue Host–Microbe Interactions in Health and Disease)
  • Article
  • Open Access
1 Citations
858 Views
16 Pages

Study of the Relationship Between Natural Mating Expression and Intestinal Resistance Genes in Captive Adult Giant Pandas

  • Ming-Yue Zhang,
  • Xiao-Hui Zhang,
  • Xue-Ying Wang,
  • Jun-Hui An and ,
  • Dong-Hui Wang,
  • Rong Hou and
  • Yu-Liang Liu
  • + 2 authors+ 0 author

A growing body of evidence indicates that the gut microbiota has a role in the mating preference process in mammals. This likely occurs through the modulation of various mating signals induced by symbiotic bacteria, thereby leading to variations in m...

  • Article
  • Open Access
1,231 Views
12 Pages

Hierarchical Risk Profiles in Tuberculosis Treatment Outcomes: The Role of Drug Resistance, Age, and Socio-Economic Factors

  • Nande Ndamase,
  • Lindiwe Modest Faye,
  • Ntandazo Dlatu,
  • Teke Apalata and
  • Mojisola Clara Hosu

Background: Tuberculosis (TB) outcomes remain suboptimal in high-burden, resource-constrained settings. Clinical and socio-economic factors contribute to loss to follow-up, failure, and mortality, yet their relative importance remains underexplored....

  • Article
  • Open Access
3 Citations
1,254 Views
17 Pages

Alginate-Based Emulsion with Oregano Essential Oil for the Preservation of Frozen–Thawed Ready-to-Cook Hake Fillets as a Model System

  • Sebastiano Rosati,
  • Martina Cofelice,
  • Nicolaia Iaffaldano,
  • Francesco Lopez and ,
  • Giuseppe Cinelli,
  • Alessandra Mazzeo,
  • Emanuele Antenucci,
  • Lucia Maiuro and
  • Elena Sorrentino
  • + 4 authors+ 0 author

Fish are nutritionally valuable foods but are also highly perishable, representing a major research focus for the development of effective preservation strategies to delay spoilage while maintaining microbiological acceptability. In this context, edi...

  • Article
  • Open Access
2 Citations
1,324 Views
23 Pages

Antimicrobial resistance (AMR) is accelerating and driven by antimicrobial use. Hospital consumption and resistance data remain scarce in Serbia. This retrospective study assessed the prevalence of infectious agents among hospitalized patients (2019&...

  • Communication
  • Open Access
2 Citations
1,265 Views
12 Pages

Whole-Genome Assembly and Antimicrobial Properties of Bacillus atrophaeus R7PjV2-12 from Spruce Picea jezoensis

  • Alexey A. Ananev,
  • Olga A. Aleynova,
  • Nikolay N. Nityagovsky,
  • Alina A. Dneprovskaya and ,
  • Alexandra S. Dubrovina,
  • Haiping Xin and
  • Konstantin V. Kiselev
  • + 2 authors+ 0 author

The search for antagonistic microorganisms as alternatives to chemical pesticides is an urgent priority in sustainable agriculture. Previously, we isolated several bacterial isolates from spruce plants, and one of them, identified as Bacillus atropha...

  • Article
  • Open Access
1,065 Views
15 Pages

Thuja arborvitae are widely grown in North America and East Asia for their ornamental value, and their leaf oil extracts have been used to treat bacterial infections. This study aimed to identify antibacterial compounds from Thuja leaves. The methano...

  • Communication
  • Open Access
1,064 Views
15 Pages

Bombiscardovia sp. JNUCC 75 (=CH12) was isolated from the flowers of Prunus yedoensis on Jeju Island, representing one of the few known flower-associated members of the Bombiscardovia asteroides group. Whole-genome sequencing revealed a compact 2.28...

  • Article
  • Open Access
1,376 Views
13 Pages

Antimicrobial resistance among multidrug-resistant enteric pathogens, such as Salmonella enterica and Shigella flexneri, poses a critical global health challenge, necessitating novel therapeutic strategies from natural sources. This study evaluated t...

  • Article
  • Open Access
1,346 Views
14 Pages

Establishment and Application of a SYBR Green I qPCR Detection Method Based on the CP40 Gene of Corynebacterium pseudotuberculosis Biovar Ovi

  • Jingpeng Zhang,
  • Jinxiu Jiang,
  • Dingding Zhang,
  • Yusheng Lin and ,
  • Chunhe Wan and
  • Yongliang Che
  • + 1 author+ 0 author

Caseous lymphadenitis (CLA), an infectious disease caused by Corynebacterium pseudotuberculosis (C. pseudotuberculosis), poses a significant economic burden to the global small ruminant industry. This study aimed to investigate genetic variations in...

  • Article
  • Open Access
2 Citations
1,430 Views
12 Pages

The global rise of multidrug resistance (MDR) across bacterial pathogens poses a severe threat to public health, with the food chain serving as a critical reservoir and transmission route for resistant clones. This study investigated the genomic epid...

(This article belongs to the Topic Multidrug Resistance Across Pathogens: Fungi, Bacteria, Parasites, and Viruses)
  • Article
  • Open Access
1 Citations
1,574 Views
22 Pages

Determining Selenomonas Species Subclusters in Periodontal Samples by FISH

  • Monika Gothwal,
  • Flurina Suter,
  • Lamprini Karygianni,
  • Thomas Attin and
  • Thomas Thurnheer

The highly destructive pathogenic processes in patients with periodontitis are attributed to the presence of subgingival biofilms comprising key periodontal pathogens, such as Porphyromonas gingivalis, Treponema denticola, and Tannerella forsythia, a...

  • Article
  • Open Access
3 Citations
1,798 Views
22 Pages

Grape-Associated Yeasts as Promising Antagonists Against Fungal Pathogens

  • Tamar Maghradze,
  • Alessandra Di Canito,
  • Carmen Cris De Oliveira Nobre Bezerra,
  • Mathabatha Evodia Setati and ,
  • Roberto Carmine Foschino,
  • Daniela Fracassetti and
  • Ileana Vigentini
  • + 2 authors+ 0 author

Biocontrol, a practice for using living organisms to target plant pathogens, offers a promising, sustainable agricultural strategy. This study involves epiphytic yeasts isolated from Vitis vinifera ssp. sylvestris and ssp. vinifera as natural antagon...

(This article belongs to the Special Issue Advances in Plant–Pathogen Interactions)
  • Article
  • Open Access
1 Citations
816 Views
15 Pages

Biotechnological Potential of Sweet Sorghum as a Substrate in the Production of Xylanases and Cellulases by Actinobacteria

  • Renata Danielle de Souza Bartolomeu,
  • Ederson da Conceição Jesus,
  • Rafael Augusto da Costa Parrella,
  • Ivanildo Evódio Marriel and
  • Maria Lúcia Ferreira Simeone

Obtaining enzymes through bioconversion depends on a complex relationship between the microorganisms and the biomass used. Here, we evaluate xylanase production by diverse actinobacterial species, cultivated using xylan as the sole carbon source and...

  • Article
  • Open Access
1,339 Views
28 Pages

Multiple Infections, Recombination, and Hypermutation During a 12-Month Prospective Study of Five HIV-1 Infected Individuals

  • Fernando M. Rodrigues,
  • Paula Prieto-Oliveira,
  • Jean P. Zukurov,
  • Wagner T. Alkmim and ,
  • Michel M. Soane,
  • Michelle Camargo,
  • Sabri S. Sanabani,
  • Esper G. Kallas,
  • Maria Cecília Sucupira and
  • Luiz Mario Janini
  • + 7 authors+ 2 authors

The considerable HIV-1 genetic diversity has several implications for viral adaptive and evolutionary capabilities. Its genetic diversity is due to its high mutational rates derived from the error-prone viral reverse transcriptase activity, which gen...

  • Article
  • Open Access
2,202 Views
12 Pages

Use of Daptomycin for the Treatment of Infective Endocarditis Due to Methicillin-Susceptible Staphylococcus aureus (MSSA): A Multicenter Retrospective Study

  • Andrea Tommasi,
  • Cesare Bolla,
  • Laura Curci,
  • Serena Penpa and ,
  • Giovanni Genga,
  • Cristina Sarda,
  • Elisabetta Svizzeretto,
  • Andrea Salvaderi,
  • Giorgia Piceni and
  • Carlo Pallotto
  • + 9 authors+ 4 authors

Infective endocarditis (IE) due to methicillin-susceptible Staphylococcus aureus (MSSA) still represents a clinical and therapeutic issue. Discrepancies between guidelines, clinical studies and clinical practice have already been highlighted, especia...

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Microbiol. Res. - ISSN 2036-7481