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27 Results Found

  • Article
  • Open Access
1 Citations
1,986 Views
13 Pages

Accurate quantification of Bifidobacterium animalis subsp. lactis HN019, a clinically validated probiotic strain conferring immune modulation, gastrointestinal health, and gut barrier integrity benefits, is essential for diverse applications. To addr...

  • Article
  • Open Access
3 Citations
2,519 Views
22 Pages

Generic Reporter Sets for Colorimetric Multiplex dPCR Demonstrated with 6-Plex SNP Quantification Panels

  • Maximilian Neugebauer,
  • Silvia Calabrese,
  • Sarah Müller,
  • Truong-Tu Truong,
  • Peter Juelg,
  • Nadine Borst,
  • Tobias Hutzenlaub,
  • Eva Dazert,
  • Nikolas Christian Cornelius von Bubnoff and
  • Michael Lehnert
  • + 1 author

17 August 2024

Digital PCR (dPCR) is a powerful method for highly sensitive and precise quantification of nucleic acids. However, designing and optimizing new multiplex dPCR assays using target sequence specific probes remains cumbersome, since fluorescent signals...

  • Article
  • Open Access
45 Citations
15,390 Views
15 Pages

Evaluation of DNA Extraction Methods Developed for Forensic and Ancient DNA Applications Using Bone Samples of Different Age

  • Catarina Xavier,
  • Mayra Eduardoff,
  • Barbara Bertoglio,
  • Christina Amory,
  • Cordula Berger,
  • Andrea Casas-Vargas,
  • Johannes Pallua and
  • Walther Parson

22 January 2021

The efficient extraction of DNA from challenging samples, such as bones, is critical for the success of downstream genotyping analysis in molecular genetic disciplines. Even though the ancient DNA community has developed several protocols targeting s...

  • Review
  • Open Access
8 Citations
9,394 Views
15 Pages

9 August 2021

Estimating the fetal fraction of DNA in a pregnant mother’s blood is a risk-free, non-invasive way of predicting fetal aneuploidy. It is a rapidly developing field of study, offering researchers a plethora of different complementary methods. Such met...

  • Article
  • Open Access
6 Citations
2,498 Views
17 Pages

A Molecular Toolbox to Identify and Quantify Grape Varieties: On the Trace of “Glera”

  • Ilaria Carrara,
  • Valeria Terzi,
  • Roberta Ghizzoni,
  • Stefano Delbono,
  • Giorgio Tumino,
  • Manna Crespan,
  • Massimo Gardiman,
  • Enrico Francia and
  • Caterina Morcia

17 August 2023

A pillar of wine authenticity is the variety/ies used. Ampelographic descriptors and SSR markers, included in several national and international databases, are extensively used for varietal identification purposes. Recently, SNP markers have been pro...

  • Article
  • Open Access
15 Citations
3,380 Views
15 Pages

The Toll-like Receptor 4 Polymorphism Asp299Gly Is Associated with an Increased Risk of Ovarian Cancer

  • Katarzyna D. Kania,
  • Daria Haręża,
  • Jacek R. Wilczyński,
  • Miłosz Wilczyński,
  • Dariusz Jarych,
  • Andrzej Malinowski and
  • Edyta Paradowska

5 October 2022

Ovarian cancer (OC) is one of the most common cancers threatening women’s lives around the world. Epithelial ovarian tumors represent the most common ovarian neoplasms. Most OC patients are diagnosed at the advanced stage, and there is an urgen...

  • Article
  • Open Access
24 Citations
12,459 Views
29 Pages

Study of the Electrocatalytic Activity of Cerium Oxide and Gold-Studded Cerium Oxide Nanoparticles Using a Sonogel-Carbon Material as Supporting Electrode: Electroanalytical Study in Apple Juice for Babies

  • M. Yahia M. Abdelrahim,
  • Stephen R. Benjamin,
  • Laura Mª Cubillana-Aguilera,
  • Ignacio Naranjo-Rodríguez,
  • José L. Hidalgo-Hidalgo De Cisneros,
  • Juan José Delgado and
  • José Mª Palacios-Santander

12 April 2013

The present work reports a study of the electrocatalytic activity of CeO2 nanoparticles and gold sononanoparticles (AuSNPs)/CeO2 nanocomposite, deposited on the surface of a Sonogel-Carbon (SNGC) matrix used as supporting electrode and the applicatio...

  • Article
  • Open Access
6 Citations
2,140 Views
17 Pages

NCAPG Regulates Myogenesis in Sheep, and SNPs Located in Its Putative Promoter Region Are Associated with Growth and Development Traits

  • Zehu Yuan,
  • Ling Ge,
  • Pengwei Su,
  • Yifei Gu,
  • Weihao Chen,
  • Xiukai Cao,
  • Shanhe Wang,
  • Xiaoyang Lv,
  • Tesfaye Getachew and
  • Wei Sun
  • + 2 authors

11 October 2023

Previously, NCAPG was identified as a candidate gene associated with sheep growth traits. This study aimed to investigate the direct role of NCAPG in regulating myogenesis in embryonic myoblast cells and to investigate the association between single-...

  • Commentary
  • Open Access
13 Citations
6,237 Views
9 Pages

17 February 2021

Determination of the relative copy numbers of mixed molecular species in nucleic acid samples is often the objective of biological experiments, including Single-Nucleotide Polymorphism (SNP), indel and gene copy-number characterization, and quantific...

  • Article
  • Open Access
6 Citations
6,478 Views
20 Pages

Evaluating the Usefulness of Human DNA Quantification to Predict DNA Profiling Success of Historical Bone Samples

  • Jacqueline Tyler Thomas,
  • Courtney Cavagnino,
  • Katelyn Kjelland,
  • Elise Anderson,
  • Kimberly Sturk-Andreaggi,
  • Jennifer Daniels-Higginbotham,
  • Christina Amory,
  • Brian Spatola,
  • Kimberlee Moran and
  • Charla Marshall
  • + 1 author

27 April 2023

This study assessed the usefulness of DNA quantification to predict the success of historical samples when analyzing SNPs, mtDNA, and STR targets. Thirty burials from six historical contexts were utilized, ranging in age from 80 to 800 years postmort...

  • Article
  • Open Access
27 Citations
5,467 Views
14 Pages

Impact of TSPO Receptor Polymorphism on [18F]GE-180 Binding in Healthy Brain and Pseudo-Reference Regions of Neurooncological and Neurodegenerative Disorders

  • Franziska J. Vettermann,
  • Stefanie Harris,
  • Julia Schmitt,
  • Marcus Unterrainer,
  • Simon Lindner,
  • Boris-Stephan Rauchmann,
  • Carla Palleis,
  • Endy Weidinger,
  • Leonie Beyer and
  • Matthias Brendel
  • + 17 authors

26 May 2021

TSPO-PET tracers are sensitive to a single-nucleotide polymorphism (rs6971-SNP), resulting in low-, medium- and high-affinity binders (LABs, MABs and HABS), but the clinical relevance of [18F]GE-180 is still unclear. We evaluated the impact of rs6971...

  • Article
  • Open Access
1,942 Views
11 Pages

Implantable Collamer Lens (ICL) surgery has increasingly been adopted for myopia correction in recent decades. This study, employing in vivo confocal microscopy (IVCM), aimed to assess the impact of corneal incision during ICL surgery on the corneal...

  • Article
  • Open Access
3 Citations
2,655 Views
6 Pages

The Role of C21orf91 in Herpes Simplex Virus Keratitis

  • Vilija Danileviciene,
  • Reda Zemaitiene,
  • Vilte Marija Gintauskiene,
  • Irena Nedzelskiene and
  • Dalia Zaliuniene

20 November 2019

Background and Objectives: This paper aims to describe the single nucleotide polymorphisms (SNPs) of C21orf91 rs1062202 and rs10446073 in patients with herpetic keratitis by evaluating corneal sub-basal nerves, as well as the density of Langerhans ce...

  • Article
  • Open Access
37 Citations
4,194 Views
11 Pages

Simultaneous Monitoring of Mutation and Chimerism Using Next-Generation Sequencing in Myelodysplastic Syndrome

  • Jong-Mi Lee,
  • Yoo-Jin Kim,
  • Sung-Soo Park,
  • Eunhee Han,
  • Myungshin Kim and
  • Yonggoo Kim

28 November 2019

Monitoring minimal residual disease (MRD) provides important information during treatment of hematologic malignancies. Chimerism analysis also provides key information after allogeneic hematopoietic stem cell transplantation (allo-HSCT). Recent advan...

  • Article
  • Open Access
17 Citations
15,396 Views
15 Pages

(1) Background: A growing body of literature suggest that polymorphisms (SNPs) from inflammation-related genes could possibly play a role in cytokine production and then interact with dietary n-3 fatty acids (FAs) to modulate inflammation. The aim of...

  • Proceeding Paper
  • Open Access
5 Citations
9,256 Views
8 Pages

16 January 2024

Ciprofloxacin (Cip) is spectrophotometrically identified through the formation of a colored charge-transfer complex that exhibits a maximum absorbance at 440 nm. This complex is generated by the reaction of the drug’s secondary amine with sodiu...

  • Article
  • Open Access
2 Citations
2,674 Views
23 Pages

Suitability of Real-Time PCR Methods for New Genomic Technique Detection in the Context of the European Regulations: A Case Study in Arabidopsis

  • Caroline Bedin Zanatta,
  • Frank Narendja,
  • Hilana El Jawhary,
  • Gretta Abou-Sleymane,
  • Saminathan Subburaj,
  • Rubens Onofre Nodari and
  • Sarah Zanon Agapito-Tenfen

PCR methods are widely applied for the detection of genetically modified organisms (GMOs) in Europe, facilitating compliance with stringent regulatory requirements and enabling the accurate identification and quantification of genetically modified tr...

  • Article
  • Open Access
3 Citations
1,253 Views
22 Pages

Seed Morphology in Vitis Cultivars Related to Hebén

  • Emilio Cervantes,
  • José Javier Martín-Gómez,
  • José Luis Rodríguez-Lorenzo,
  • Diego Gutiérrez del Pozo,
  • Félix Cabello Sáenz de Santamaría,
  • Gregorio Muñoz-Organero and
  • Ángel Tocino

Resolving the genetic relationships between cultivars is one of the objectives of research in viticulture. To this end, both DNA markers and morphological analysis help to identify synonyms and homonyms and to determine the degree of relatedness betw...

  • Article
  • Open Access
3,190 Views
11 Pages

Docosahexaenoic Acid and Eicosapentaenoic Acid Intakes Modulate the Association of FADS2 Gene Polymorphism rs526126 with Plasma Free Docosahexaenoic Acid Levels in Overweight Children

  • Alexandra Mihailescu,
  • Vlad Serafim,
  • Corina Paul,
  • Nicoleta Andreescu,
  • Diana-Andreea Tiugan,
  • Paul Tutac,
  • Iulian Velea,
  • Cristian G. Zimbru,
  • Costela Lacrimioara Serban and
  • Mihai Dinu Niculescu
  • + 4 authors

21 October 2021

Polyunsaturated fatty acids are involved in a wide variety of biological functions. Linoleic acid and alpha-linolenic acid are two essential fatty acids that the body cannot synthesize. The conversion rates in the body depend on FADS2 genetic variant...

  • Article
  • Open Access
12 Citations
9,192 Views
26 Pages

Mutation Scanning in a Single and a Stacked Genetically Modified (GM) Event by Real-Time PCR and High Resolution Melting (HRM) Analysis

  • Sina-Elisabeth Ben Ali,
  • Zita Erika Madi,
  • Rupert Hochegger,
  • David Quist,
  • Bernhard Prewein,
  • Alexander G. Haslberger and
  • Christian Brandes

31 October 2014

Genetic mutations must be avoided during the production and use of seeds. In the European Union (EU), Directive 2001/18/EC requires any DNA construct introduced via transformation to be stable. Establishing genetic stability is critical for the appr...

  • Article
  • Open Access
9 Citations
3,182 Views
11 Pages

Developing a Sensitive Platform to Measure 5-Methyltetrahydrofolate in Subjects with MTHFR and PON1 Gene Polymorphisms

  • Mong-Liang Lu,
  • Wei-Chi Ku,
  • Nailis Syifa,
  • Shu-Chin Hu,
  • Chia-Te Chou,
  • Yi-Hsio Wu,
  • Po-Hsiu Kuo,
  • Chun-Hsin Chen,
  • Wei J. Chen and
  • Tzu-Hua Wu

13 August 2022

Inadequate levels of 5-methyltetrahydrofolate (5-MTHF) and the T variant of MTHFR C677T have been suggested to be associated with an increased risk of developing mental illness, whereas the PON1 SNP variant provides a protective role. However, report...

  • Review
  • Open Access
49 Citations
9,287 Views
41 Pages

Genomic Approaches for Improvement of Tropical Fruits: Fruit Quality, Shelf Life and Nutrient Content

  • Malarvizhi Mathiazhagan,
  • Bhavya Chidambara,
  • Laxman R. Hunashikatti and
  • Kundapura V. Ravishankar

25 November 2021

The breeding of tropical fruit trees for improving fruit traits is complicated, due to the long juvenile phase, generation cycle, parthenocarpy, polyploidy, polyembryony, heterozygosity and biotic and abiotic factors, as well as a lack of good genomi...

  • Article
  • Open Access
6 Citations
2,914 Views
27 Pages

Genetic Dissection of ToLCNDV Resistance in Resistant Sources of Cucumis melo

  • Clara Pérez-Moro,
  • Cristina Sáez,
  • Alicia Sifres,
  • Carmelo López,
  • Narinder P. S. Dhillon,
  • Belén Picó and
  • Ana Pérez-de-Castro

15 August 2024

Tomato leaf curl New Delhi virus (ToLCNDV) is a begomovirus causing significant melon (Cucumis melo) crop losses globally. This study aims to map the ToLCNDV resistance in the PI 414723 melon accession, previously identified and characterized through...

  • Feature Paper
  • Article
  • Open Access
6 Citations
2,767 Views
11 Pages

Mapping of Adult Plant Leaf Rust Resistance in Aus27506 and Validation of Underlying Loci by In-Planta Fungal Biomass Accumulation

  • Pakeerathan Kandiah,
  • Mumta Chhetri,
  • Matthew Hayden,
  • Michael Ayliffe,
  • Harbans Bariana and
  • Urmil Bansal

Among the rust diseases, leaf rust of wheat caused by Puccinia triticina, is the most prevalent worldwide and causes significant yield losses. This study aimed to determine the genomic location of loci that control adult plant resistance (APR) to lea...

  • Article
  • Open Access
3 Citations
2,196 Views
11 Pages

The Human 8-oxoG DNA Glycosylase 1 (OGG1) Ser326Cys Polymorphism in Infertile Men

  • César Antonio González-Díaz,
  • María Antonieta Suárez-Souto,
  • Elvia Pérez-Soto,
  • Modesto Gómez-López,
  • Jacobo Esteban Munguía-Cervantes,
  • Nadia Mabel Pérez-Vielma and
  • Virginia Sánchez-Monroy

Background/Objectives: 8-hydroxy-2′-deoxyguanosine (8-OHdG) is a form of oxidative DNA damage caused by oxidative stress (OS), which is considered a major factor in male infertility. The cellular defense system against 8-OHdG involves base exci...

  • Article
  • Open Access
158 Views
19 Pages

Age- and Genotype-Associated Specific Expression of IL-1 and TNF Receptors on Immunocompetent Cells

  • Julia Zhukova,
  • Julia Lopatnikova,
  • Filipp Vasilyev,
  • Alina Alshevskaya,
  • Darya Lipa and
  • Sergey Sennikov

Aging is accompanied by a chronic, low-grade inflammatory state known as “inflammaging,” largely driven by dysregulated signaling of pro-inflammatory cytokines like IL-1 and TNF-α. The biological impact of these cytokines is modulat...

  • Article
  • Open Access
717 Views
13 Pages

A Validation Approach for Determining Fetal Blood Groups Non-Invasively by High-Sensitive Next-Generation Sequencing

  • Sandra Wienzek-Lischka,
  • Marion Soelter,
  • Annika Froelich,
  • Marion Ernst-Schlegel,
  • Stefan Gattenloehner,
  • Andreas Braeuninger and
  • Ulrich J. Sachs

26 September 2025

Introduction: For pregnant women with a history of fetal and neonatal alloimmune thrombocytopenia (FNAIT) or hemolytic disease of the fetus and newborn (HDFN), prenatal intervention in subsequent pregnancies may be necessary to prevent complications...