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  • Article
  • Open Access
189 Views
15 Pages

10 February 2026

The tendon-to-bone enthesis is a multiphasic structure with four structurally continuous and compositionally distinct regions: tendon, uncalcified fibrocartilage, calcified fibrocartilage and bone. Our study aimed to develop 3D scaffold-free in vitro...

  • Article
  • Open Access
228 Views
10 Pages

Xenograft-Derived Human Breast Cancer Organoids Can Form Chimeras with Host Mouse Mammary Epithelial Cells Which Promote Tumor Cell Proliferation

  • Hiroyuki Uematsu,
  • Chieko Saito,
  • Jumpei Kondo,
  • Kunishige Onuma,
  • Roberto Coppo,
  • Hiroko Endo,
  • Takahiro Nakayama,
  • Katsuhide Yoshidome,
  • Taisei Nomura and
  • Masahiro Inoue
  • + 1 author

Breast cancer progression and treatment responsiveness are significantly influenced by the tumor microenvironment. Therefore, transplantation into the mammary fat pad is widely employed to establish a mouse xenograft model of breast cancer. This stud...

  • Article
  • Open Access
278 Views
31 Pages

High-Throughput Analysis of 3D Cell Culture Oxygen Consumption Using Sensor Arrays: A Novel Platform for Hypoxia/Normoxia Research

  • Christoph Grün,
  • Cordula Nies,
  • Magdalena Klesen,
  • Enja Schwarz,
  • Jonah ter Haseborg,
  • Cornelius Dettmer,
  • Christian Beyer,
  • Larissa Funk and
  • Eric Gottwald

Precise control and measurement of the cellular microenvironment, particularly oxygen concentration, are crucial for developing physiologically relevant in vitro models. However, current methods often lack the spatial resolution and throughput needed...

  • Article
  • Open Access
385 Views
17 Pages

A Fully Annotated Hepatoblastoma Tumoroid Biobank Details Treatment-Induced Evolution and Clonal Dynamics in Paediatric Cancer Patients

  • Gijs J. F. van Son,
  • Femke C. A. S. Ringnalda,
  • Markus J. van Roosmalen,
  • Thomas A. Kluiver,
  • Quinty Hansen,
  • Evelien Duiker,
  • Marius C. van den Heuvel,
  • Vincent E. de Meijer,
  • Ruben H. de Kleine and
  • Hans Clevers
  • + 6 authors

Hepatoblastoma (HB) is a paediatric liver malignancy arising from hepatic precursor cells, with >90% of cases harbouring a mutation in exon 3 of CTNNB1. We present a fully genetically characterised HB tumour organoid (tumoroid) biobank, which allo...

  • Article
  • Open Access
349 Views
18 Pages

Human umbilical cord-derived mesenchymal stem cells (hUC-MSCs) possess the potential for chondrogenic differentiation, offering a promising alternative source for cartilage regeneration. To address the limited availability and expansion capacity of a...

  • Review
  • Open Access
1 Citations
941 Views
18 Pages

Decellularized Extracellular Matrix for Organoids Development and 3D Bioprinting

  • Elena Gkantzou,
  • Alexandro Rodríguez-Rojas,
  • Aleksandra Chmielewska,
  • Barbara Pratscher,
  • Surina Surina,
  • Patricia Freund and
  • Iwan A. Burgener

Organoids are three-dimensional multicellular structures that mimic key aspects of native tissues consisting ideal tools to study organ development and pathophysiology when incorporated in customized bioscaffolds. In vivo, the extracellular matrix (E...

  • Article
  • Open Access
556 Views
19 Pages

Organoids consisting of primary human cells, i.e., astrocytes, pericytes, and endothelial cells, form a functional blood–brain barrier (BBB) in vitro. The ability of FITC-dextran (70 kDa), calcium phosphate nanoparticles (100 nm), Escherichia c...

  • Article
  • Open Access
586 Views
16 Pages

Evaluation of a Gene Expression-Based Machine Learning Classifier to Discriminate Normal from Cancer Gastric Organoids

  • Daniel Skubleny,
  • Hasnaien Ahmed,
  • Sebastiao N. Martins-Filho,
  • David Ross McLean,
  • Daniel E. Schiller and
  • Gina R. Rayat

5 December 2025

Three-dimensional cell model systems such as tumour organoids allow for in vitro modelling of self-organized tissue with functional and histologic similarity to in vivo tissue. However, there is a need for standard protocols and techniques to confirm...

  • Review
  • Open Access
922 Views
36 Pages

4 December 2025

Ensuring access to safe drinking water is a fundamental public health priority, yet the growing diversity of contaminants demands more human-relevant toxicity assessment frameworks. Conventional models based on immortalized cell lines or sentinel spe...

  • Review
  • Open Access
1 Citations
1,245 Views
12 Pages

3 December 2025

Cancer remains a leading cause of mortality worldwide. Patient-derived organoids (PDOs) are three-dimensional (3D) cultures that recapitulate tumor histology, genetics, and cellular heterogeneity, providing physiologically relevant preclinical models...

  • Commentary
  • Open Access
2,260 Views
13 Pages

18 November 2025

As brain organoids and organoid-based computational models grow in complexity, they increasingly exhibit electrophysiological patterns consistent with plasticity and information processing. This article explores a central question at the intersection...

  • Review
  • Open Access
1 Citations
1,172 Views
16 Pages

14 November 2025

This review aims to highlight how the study of kidney organoids combined with proteomic analysis can deepen our understanding of renal physiology and disease. Proteomics quantifies proteins in a sample, allowing us to determine which proteins are pre...

  • Article
  • Open Access
3,216 Views
14 Pages

6 November 2025

Human retinal organoids derived from pluripotent stem cells represent a robust in vitro model for investigating retinal development and disease mechanisms of retinal disorders. However, achieving structural maturation that faithfully recapitulates th...

  • Review
  • Open Access
2,130 Views
35 Pages

Integrating 3D Bioprinting with Organoid Technology-Based Breast Cancer Models for Drug Evaluation

  • Arvind Kumar Shukla,
  • Sandhya Shukla,
  • Raj Kumar Mongre,
  • Adarsha Mahendra Upadhyay,
  • Govindhan Thiruppathi,
  • Chandra Dhar Shukla,
  • Shuktika Mishra and
  • Sayan Deb Dutta

5 November 2025

Breast cancer remains one of the leading causes of cancer morbidity and mortality among women worldwide. Conventional two-dimensional (2D) cell culture models and animal studies often fail to accurately recapitulate the complex tumor microenvironment...

  • Article
  • Open Access
1 Citations
1,612 Views
21 Pages

Development of a Trophoblast Organoid Resource in a Translational Primate Model

  • Brady M. Wessel,
  • Jenna N. Castro,
  • Henry F. Harrison,
  • Brian P. Scottoline,
  • Margaret C. Wilcox,
  • Maureen K. Baldwin and
  • Victoria H. J. Roberts

First-trimester placental development comprises many critical yet understudied cellular events that determine pregnancy outcomes. Improper placentation leads to a host of health issues that not only impact the fetal period but also influence later-li...

  • Article
  • Open Access
1,057 Views
17 Pages

Dysregulated Intestinal Nutrient Absorption in Obesity Is Associated with Altered Chromatin Accessibility

  • Dilhana S. Badurdeen,
  • Zhen Li,
  • Jeong-Heon Lee,
  • Tao Ma,
  • Aditya Vijay Bhagwate,
  • Rachel Latanich,
  • Arjit Dogiparthi,
  • Tamas Ordog,
  • Olga Kovbasnjuk and
  • Jennifer Foulke-Abel
  • + 1 author

Obesity is an epidemic with myriad health effects, but little is understood regarding individual obese phenotypes and how they may respond to therapy. Epigenetic changes associated with obesity have been detected in blood, liver, pancreas, and adipos...

  • Review
  • Open Access
5 Citations
5,826 Views
41 Pages

Organoid technology has emerged as a revolutionary tool in cancer research, offering physiologically accurate, three-dimensional models that preserve the histoarchitecture, genetic stability, and phenotypic complexity of primary tumors. These self-or...

  • Article
  • Open Access
1,142 Views
18 Pages

The Cell of Origin Defines the Transcriptional Program of APC-Transformed Organoids

  • Aleksandar B. Kirov,
  • Veerle Lammers,
  • Arezo Torang,
  • Jan Koster and
  • Jan Paul Medema

30 September 2025

In many cancers, tumorigenesis is determined in part by the cell type in the tissue that transforms, which has been called the cell of origin. In intestinal cancer, previous observations suggested that transformation can occur from both stem cells an...

  • Article
  • Open Access
2,092 Views
12 Pages

Air–Liquid-Interface-Differentiated Human Nose Epithelium: The Benchmark Culture Model for SARS-CoV-2 Infection

  • Sarah L. Harbach,
  • Bang M. Tran,
  • Abderrahman Hachani,
  • Samantha Leigh Grimley,
  • Damian F. J. Purcell,
  • Georgia Deliyannis,
  • Joseph Torresi,
  • Julie L. McAuley and
  • Elizabeth Vincan

18 September 2025

COVID-19 has triggered the rapid adoption of human organoid-based tissue culture models to overcome the limitations of the commonly used Vero cell line that did not fully recapitulate SARS-CoV-2 infection of human tissues. As the primary site of SARS...

  • Review
  • Open Access
3,488 Views
21 Pages

5 September 2025

The stomach epithelium is a highly dynamic tissue that undergoes continuous self-renewal and responds robustly to injury through tightly regulated repair processes. Organoids have emerged as powerful tools for modelling gastrointestinal biology. This...

  • Article
  • Open Access
1,539 Views
11 Pages

Paraffin Embedding and Histological Analyses of Sw71-Spheroids as Human Blastocyst-like Surrogates

  • Marina Alexandrova,
  • Mariela Ivanova,
  • Martina Metodieva,
  • Antonia Terzieva and
  • Tanya Dimova

Implantation studies are extremely important to solve reproductive problems since about 60% of abortions occur around this period. The 3D in vitro models emerge as closest to the in vivo structures and processes. Here, we constructed trophoblast Sw71...

  • Review
  • Open Access
1 Citations
2,143 Views
22 Pages

Applications of Organoids and Spheroids in Anaplastic and Papillary Thyroid Cancer Research: A Comprehensive Review

  • Deepak Gulwani,
  • Neha Singh,
  • Manisha Gupta,
  • Ridhima Goel and
  • Thoudam Debraj Singh

Organoid and spheroid technologies have rapidly become pivotal in thyroid cancer research, offering models that are more physiologically relevant than traditional two-dimensional culture. In the study of papillary and anaplastic thyroid carcinomas, t...

  • Article
  • Open Access
1,493 Views
22 Pages

Background/Objectives: VitroScreenORA® (by VitroScreen srl) Dermo Papilla spheroids, based on two micro-physiological systems (non-vascularized DP and vascularized VASC-DP), were used to study the molecular mechanisms behind hair cycle regression...

  • Review
  • Open Access
3 Citations
12,576 Views
29 Pages

A Concise Review of Organoid Tissue Engineering: Regenerative Applications and Precision Medicine

  • Karnika Yogeswari Makesh,
  • Abilash Navaneethan,
  • Mrithika Ajay,
  • Ganesh Munuswamy-Ramanujam,
  • Arulvasu Chinnasamy,
  • Dhanavathy Gnanasampanthapandian and
  • Kanagaraj Palaniyandi

Organoids are three-dimensional tissue culture models derived from stem cells, and they have become one of the most valuable tools in biomedical research. These self-organizing miniature organs mimic the structure−function properties of their i...

  • Article
  • Open Access
1,512 Views
21 Pages

Pyrvinium Pamoate and BCL-XL Inhibitors Act Synergistically to Kill Patient-Derived Colorectal Adenoma Organoids

  • Maree C. Faux,
  • Chenkai Ma,
  • Serena R. Kane,
  • Andre Samson,
  • Yumiko Hirokawa,
  • Ilka Priebe,
  • Leah Cosgrove,
  • Rajvinder Singh,
  • Michael Christie and
  • Antony W. Burgess
  • + 2 authors

Current systemic therapies for advanced colorectal cancer (CRC) have limited efficacy, so more effective strategies for the treatment and prevention of CRC are needed. The majority of colorectal cancers are initiated by mutations in Wnt signalling pa...

  • Communication
  • Open Access
1,886 Views
11 Pages

Resistance to MAPK Pathway Inhibition in BRAF-V600E Mutant Colorectal Cancer Can Be Overcome with Insulin Receptor/Insulin-like Growth Factor-1 Receptor Inhibitors

  • Layla El Bouazzaoui,
  • Daniëlle A. E. Raats,
  • André Verheem,
  • Inne H. M. Borel Rinkes,
  • Hugo J. G. Snippert,
  • Madelon M. Maurice and
  • Onno Kranenburg

The current treatment for refractory BRAF-V600E mutant metastatic colorectal cancer (mCRC) involves combined inhibition of BRAF and the epidermal growth factor receptor (EGFR). However, tumour responses are often short-lived due to a rebound in mitog...

  • Communication
  • Open Access
3 Citations
2,381 Views
15 Pages

Improved in vitro models are needed to reduce costs and delays in central nervous system (CNS) drug discovery. The FDA Modernization Acts 2.0 and 3.0 require human-centered alternative testing methods to mitigate animal-based experiments and discover...

  • Review
  • Open Access
1,507 Views
24 Pages

Non-Animal Technologies to Study and Target the Tumour Vasculature and Angiogenesis

  • Elisabetta Ferrero,
  • Jonas Hue,
  • Marina Ferrarini and
  • Lorenzo Veschini

Tumour-associated angiogenesis plays a key role at all stages of cancer development and progression by providing a nutrient supply, promoting the creation of protective niches for therapy-resistant cancer stem cells, and supporting the metastatic cas...

  • Article
  • Open Access
2 Citations
3,871 Views
18 Pages

Matrix Stiffness Affects Spheroid Invasion, Collagen Remodeling, and Effective Reach of Stress into ECM

  • Klara Beslmüller,
  • Rick Rodrigues de Mercado,
  • Gijsje H. Koenderink,
  • Erik H. J. Danen and
  • Thomas Schmidt

The extracellular matrix (ECM) provides structural support to cells, thereby forming a functional tissue. In cancer, the growth of the tumor creates internal mechanical stress, which, together with the remodeling activity of tumor cells and fibroblas...

  • Opinion
  • Open Access
2 Citations
6,773 Views
11 Pages

The development of brain organoids from human-induced pluripotent stem cells (iPSCs) has expanded research into neurodevelopment, disease modeling, and drug testing. More recently, the concept of organoid intelligence (OI) has emerged, proposing that...

  • Communication
  • Open Access
1,930 Views
9 Pages

Recent research works have shown the effect of nutrient concentration on cell activity, such as proliferation and differentiation. In 3D cell culture, the impact of scaffold geometry, including pore size, strut diameter, and pore shape, on the concen...

  • Review
  • Open Access
3 Citations
7,791 Views
33 Pages

Organoid Models of Lymphoid Tissues

  • Ania Bogoslowski,
  • Joice Ren,
  • Clément Quintard and
  • Josef M. Penninger

Lymphoid organs are critical for organizing the development of the immune system, generating immune tolerance, and orchestrating the adaptive immune response to foreign antigens. Defects in their structure and function can lead to immunodeficiency, h...

  • Review
  • Open Access
5,799 Views
17 Pages

In cell biology, the stem cell niche is the dynamic microenvironment in which stem cells reside and receive signals that determine their behavior and fate. The stem cell niche has largely been a theoretical construct due to the difficulty in identify...

  • Article
  • Open Access
1 Citations
2,716 Views
16 Pages

Breast Cancer Tissues and Organoids BioBank: Constitution, Research Activities and Samples Access

  • Lucia Miranda,
  • Luigi Mandrich,
  • Simona Massa,
  • Teresa Nutile,
  • Clotilde Crovella,
  • Ilaria De Rosa,
  • Raffaella Lucci,
  • Filippo De Rosa,
  • Pasquale Somma and
  • Emilia Caputo
  • + 4 authors

In 2023, at the Center for Biological Resources (CRB) at the Institute of Genetics and Biophysics (IGB, Naples, Italy) of the National Research Council (CNR), the Breast Cancer Tissues and Organoids Biobank (BCTO BioBank) was founded. This is a new g...

  • Article
  • Open Access
2,320 Views
15 Pages

Paneth Cells Are a Constitutive Source of IL-10 in Mouse Small Intestinal Organoids

  • Huong Nguyen,
  • Francesca Di Cara,
  • Jun Wang and
  • Andrew W. Stadnyk

12 February 2025

The healthy gut masks a dynamic balance between pro- and anti-inflammatory activities, largely due to microbial factors in the lumen. IL-10 is vital among the anti-inflammatory mediators, yet confirming constitutive versus stimulated secretion in any...

  • Communication
  • Open Access
1 Citations
2,033 Views
8 Pages

Establishment of Intestinal Organoids from Common Marmosets

  • Arisa Ishimura,
  • Ken Iwatsuki and
  • Hiroo Imai

12 February 2025

Intestinal organoids are useful for the in vitro investigation of the properties of intestinal epithelial cells and their interaction with the gut microbiome. In this study, we cultured cecal and colonic organoids from common marmosets, which are hig...

  • Review
  • Open Access
2 Citations
3,308 Views
18 Pages

Precision Medicine for Peritoneal Carcinomatosis—Current Advances in Organoid Drug Testing and Clinical Applicability

  • Harleen Kaur,
  • Josephine A. Wright,
  • Daniel L. Worthley,
  • Elizabeth Murphy and
  • Susan L. Woods

Peritoneal carcinomatosis from gastrointestinal tumours is considered a poor prognostic factor, with a median overall survival of six to nine months in the absence of intervention. The advent of patient-derived organoid cultures (PDOs) has provided a...

  • Article
  • Open Access
1 Citations
3,806 Views
19 Pages

Three-Dimensional Morphological Characterisation of Human Cortical Organoids Using a Customised Image Analysis Workflow

  • Sarah Handcock,
  • Kay Richards,
  • Timothy J. Karle,
  • Pamela Kairath,
  • Alita Soch,
  • Carolina A. Chavez,
  • Steven Petrou and
  • Snezana Maljevic

Summary Statement: A tailored image analysis workflow was applied to quantify cortical organoid health, development, morphology and cellular composition over time. The assessment of cellular composition and viability of stem cell-derived organoid mod...

  • Article
  • Open Access
1 Citations
2,836 Views
14 Pages

Pre-Adipocytes in 3D Co-Culture Underwent Self-Differentiation: New Perspectives for an Old Model

  • Tamara Dal-Mora,
  • Najla Adel Saleh,
  • Veridiana Pacheco Goulart Martinazzo,
  • Maria Luiza Carneiro Buchele,
  • Michele Patrícia Rode,
  • Adny Henrique Silva,
  • Laura Sartori Assunção,
  • Tânia Beatriz Creczynski-Pasa and
  • Fabiola Branco Filippin-Monteiro

18 December 2024

Adipogenesis is a complex process influenced by various cellular interactions within adipose tissue, which plays a critical role in metabolic homeostasis. This study aimed to develop a novel in vitro three-dimensional (3D) co-culture model using muri...

  • Feature Paper
  • Article
  • Open Access
4,193 Views
14 Pages

Establishment and Validation of Patient-Derived Non-Small Cell Lung Cancer Organoids as In Vitro Lung Cancer Models

  • Raphael S. Werner,
  • Jae-Hwi Jang,
  • Markus Rechsteiner,
  • Michaela B. Kirschner and
  • Isabelle Opitz

9 November 2024

Background: Recent advances in the personalized treatment of non-small cell lung cancer (NSCLC) require representative in vitro model systems that reflect tumor heterogeneity and maintain the characteristic genetic aberrations. We therefore aimed to...

  • Review
  • Open Access
2 Citations
4,680 Views
15 Pages

Precision Medicine for Gastric Cancer: Current State of Organoid Drug Testing

  • Tharindie N. Silva,
  • Josephine A. Wright,
  • Daniel L. Worthley and
  • Susan L. Woods

31 October 2024

Gastric cancer (GC) presents a significant health challenge and ranks as the fifth most common cancer in the world. Unfortunately, most patients with GC exhaust standard care treatment options due to late diagnosis and tumour heterogeneity that leads...

  • Review
  • Open Access
9 Citations
8,304 Views
19 Pages

Bioengineering Tooth and Periodontal Organoids from Stem and Progenitor Cells

  • Fuad Gandhi Torizal,
  • Syarifah Tiara Noorintan and
  • Zakiya Gania

3 October 2024

Tooth and periodontal organoids from stem and progenitor cells represent a significant advancement in regenerative dentistry, offering solutions for tooth loss and periodontal diseases. These organoids, which mimic the architecture and function of re...

  • Review
  • Open Access
10 Citations
9,288 Views
44 Pages

Recent Advances and Future Perspectives in Vascular Organoids and Vessel-on-Chip

  • Gowtham Reddy Cheruku,
  • Chloe Veronica Wilson,
  • Suriya Raviendran and
  • Qingzhong Xiao

4 September 2024

Recent advancements in vascular organoid (VO) and vessel-on-chip (VoC) technologies have revolutionized our approach to studying human diseases, offering unprecedented insights through more physiologically relevant models. VOs generated from human pl...

  • Study Protocol
  • Open Access
1 Citations
4,698 Views
9 Pages

A Method to Study Migration and Invasion of Mouse Intestinal Organoids

  • Valérie M. Wouters,
  • Ciro Longobardi and
  • Jan Paul Medema

21 August 2024

Colorectal cancer (CRC) is the third most common cancer worldwide and it is the second leading cause of cancer death. In CRC, as in most cancers, the formation of metastasis through the migration and invasion of cancer cells to distant organs is asso...

  • Review
  • Open Access
6 Citations
7,247 Views
20 Pages

Trophoblast Organoids: Capturing the Complexity of Early Placental Development In Vitro

  • Brady M. Wessel,
  • Jenna N. Castro and
  • Victoria H. J. Roberts

2 August 2024

First trimester placental development comprises some of the most critical yet understudied events that impact fetal development. Improper placentation leads to a host of health issues that not only impact the fetal period but also influence offspring...

  • Opinion
  • Open Access
1 Citations
3,991 Views
9 Pages

1 August 2024

Globally, a number of diseases impact us and while treatment options exist, it is often found that similar treatments have variable effects on different patients with the same disease. Particularly in the case of conditions that are closely associate...

  • Article
  • Open Access
5,071 Views
17 Pages

Heparin-Binding Epidermal-like Growth Factor (HB-EGF) Reduces Cell Death in an Organoid Model of Retinal Damage

  • Michelle N. H. Tang,
  • Mariya Moosajee,
  • Najam A. Sharif,
  • G. Astrid Limb and
  • Karen Eastlake

5 July 2024

In zebrafish and various mammalian species, HB-EGF has been shown to promote Müller glia proliferation and activation of repair mechanisms that have not been fully investigated in human retina. In the current study, 70- to 90-day-old human retin...

  • Article
  • Open Access
2 Citations
2,328 Views
22 Pages

Single-Cell Assessment of Human Stem Cell-Derived Mesolimbic Models and Their Responses to Substances of Abuse

  • Thomas P. Rudibaugh,
  • Ryan W. Tam,
  • R. Chris Estridge,
  • Samantha R. Stuppy and
  • Albert J. Keung

20 June 2024

The mesolimbic pathway connects ventral tegmental area dopaminergic neurons and striatal medium spiny neurons, playing a critical role in reward and stress behaviors. Exposure to substances of abuse during development and adulthood has been linked to...

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Organoids - ISSN 2674-1172