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How Will Environmental Conditions Affect Species Distribution and Survival in the Coming Decades—A Review -
New Records of Marine Mollusca from the Culuccia Peninsula (NW Sardinia, Italy) -
Pseudoscorpions from Motu Motiro Hiva, a Remote Polynesian Island, with the Description of a New Genus of Chernetidae (Pseudoscorpiones)
Journal Description
Diversity
Diversity
is a peer-reviewed, open access journal on the science of biodiversity (from molecules, genes, populations, and species to ecosystems), and is published monthly online by MDPI.
- Open Access— free for readers, with article processing charges (APC) paid by authors or their institutions.
- High Visibility: indexed within Scopus, SCIE (Web of Science), PubAg, GEOBASE, CAPlus / SciFinder, and other databases.
- Journal Rank: JCR - Q2 (Biodiversity Conservation) / CiteScore - Q1 (Agricultural and Biological Sciences (miscellaneous))
- Rapid Publication: manuscripts are peer-reviewed and a first decision is provided to authors approximately 16.6 days after submission; acceptance to publication is undertaken in 2.8 days (median values for papers published in this journal in the second half of 2025).
- Recognition of Reviewers: reviewers who provide timely, thorough peer-review reports receive vouchers entitling them to a discount on the APC of their next publication in any MDPI journal, in appreciation of the work done.
- Diversity is a companion journal of Fossil Studies.
- Journal Cluster of Ecosystem and Resource Management: Forests, Diversity, Fire, Conservation, Ecologies, Biosphere and Wild.
Impact Factor:
2.1 (2024);
5-Year Impact Factor:
2.3 (2024)
Latest Articles
Ecological Effects of Seaweed Restoration on Benthic Macrofauna in Marine Forest Development Areas Along the Eastern Coast of Korea
Diversity 2026, 18(1), 27; https://doi.org/10.3390/d18010027 - 2 Jan 2026
Abstract
Although marine forest restoration projects have been widely implemented along the Korean coast, most evaluations have relied on simple structural indicators such as seaweed coverage or biomass, leaving functional responses of benthic macrofaunal communities largely unexplored. This study examined the effects of marine
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Although marine forest restoration projects have been widely implemented along the Korean coast, most evaluations have relied on simple structural indicators such as seaweed coverage or biomass, leaving functional responses of benthic macrofaunal communities largely unexplored. This study examined the effects of marine forest restoration on the functional structure of macrozoobenthic communities at development sites along Korea’s eastern coast in 2021 and 2024. Seaweed biomass increased significantly in 2024 compared to that in 2021, and this increase in seaweed biomass showed a clear positive correlation with increases in species number, density, and biomass of macrozoobenthos. Changes in feeding types of macrozoobenthic communities were remarkable, with grazer density increasing most sharply, followed by carnivores, omnivores, and suspension feeders. Red algal biomass was also positively correlated with suspension feeders and grazers, suggesting that seaweed mediated habitat and secondary food-web structures beyond providing simple food resources. These results indicate that seaweed habitat restoration plays an important role in recovering the functional diversity and feeding guild composition of macrozoobenthic communities and demonstrates the potential of using both species and functional diversity indicators to evaluate the effectiveness of marine forest restoration projects in Korea.
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(This article belongs to the Special Issue Dynamics of Marine Communities—Second Edition)
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Monitoring Genetic Diversity in Lithuanian Riverine Populations of Stuckenia pectinata Using SSR and ISSR Markers
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Jolanta Patamsytė, Jurgita Butkuvienė, Donatas Naugžemys and Donatas Žvingila
Diversity 2026, 18(1), 26; https://doi.org/10.3390/d18010026 - 1 Jan 2026
Abstract
Sago pondweed (Stuckenia pectinata (L.) Börner) is a genetically and ecologically diverse submerged macrophyte, notable for its versatile reproductive characteristics, with a broad global distribution, excluding only the Arctic and Antarctic regions. This cosmopolitan species remains underexplored genetically in Lithuania compared to
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Sago pondweed (Stuckenia pectinata (L.) Börner) is a genetically and ecologically diverse submerged macrophyte, notable for its versatile reproductive characteristics, with a broad global distribution, excluding only the Arctic and Antarctic regions. This cosmopolitan species remains underexplored genetically in Lithuania compared to some other European regions. The aim of this study was to investigate the state and distribution of genetic diversity across Lithuanian river populations. We analyzed genetic variation in ten riverine populations using both simple sequence repeats (SSRs) and intersimple sequence repeats (ISSR). Genetic distances between genotypes and populations, as revealed by SSR markers, correlated with those determined using ISSR markers, confirming consistency across the two marker systems. STRUCTURE analysis revealed the presence of two distinct genotype pools. Our study demonstrated that the majority of genetic variation resides within populations, with an FST value of 0.212 (SSR) and a ΦPT value of 0.352 (ISSR). These findings suggest high genetic differentiation among populations. The absence of a relationship between genetic diversity and hydrochemical or hydromorphological parameters at plant collection sites suggests that the population structure of this species is shaped primarily by evolutionary and/or demographic mechanisms, rather than by local environmental hydrochemical conditions. Overall, this study revealed high within-population genetic diversity and underlying genetic structure in S. pectinata populations across Lithuanian rivers.
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(This article belongs to the Special Issue Population Genetics of Animals and Plants—2nd Edition)
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Foraging Habitat Selection of Shrubland Bird Community During the Dry Season in Tropical Dry Forests
by
Anant Deshwal, Pooja Panwar, Brian M. Becker and Steven L. Stephenson
Diversity 2026, 18(1), 25; https://doi.org/10.3390/d18010025 - 1 Jan 2026
Abstract
Unmitigated climate change, coupled with habitat loss, has made the grassland and shrubland bird communities particularly vulnerable to extinction. Climate change-induced drought reduces net primary productivity, food availability, habitat quality, and alters vegetation structure. These factors collectively increase mortality in grassland and shrubland
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Unmitigated climate change, coupled with habitat loss, has made the grassland and shrubland bird communities particularly vulnerable to extinction. Climate change-induced drought reduces net primary productivity, food availability, habitat quality, and alters vegetation structure. These factors collectively increase mortality in grassland and shrubland birds. However, limited data on habitat use by tropical birds hampers the development of effective management plans for drought-affected landscapes. We examined the foraging sites of 18 shrubland bird species, including two endemic and four declining species, across three shrubland forest sites in the Eastern Ghats of India during the dry season. We recorded microhabitat features within an 11 m radius of observed foraging points and compared them with random plots. Additionally, we examined the association between bird species and plant species where a bird was observed foraging. Foraging sites differed significantly from random plots, indicating active selection of microhabitats by shrubland birds. Using linear discriminant analysis, we found that the microhabitat features important for the bird species were presence of ground cover, shrub density, vegetational height, and vertical foliage stratification. Our results show that diet guild and foraging strata influence the foraging microhabitat selection of a species. Microhabitat attributes selected by shrubland specialist species differed from those of generalist shrubland users. Thirteen out of 18 focal species showed a significant association with at least one plant species. Birds were often associated with plants that were green during the dry season. Based on habitat selection and plant associations, we identified several habitat attributes that can be actively managed. Despite being classified as wastelands, the heavily degraded shrub forests can be rehabilitated through strategic and selective harvesting of forest products, targeting invasive species, and a spatially and temporally controlled livestock grazing regime.
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(This article belongs to the Topic Ecology, Management and Conservation of Vertebrates: 2nd Edition)
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Open AccessArticle
Artificial Cultivation Reshapes Soil Nutrient Heterogeneity, Microbial Community Structure, and Multi-Nutrient Cycling Drivers of the Endangered Medicinal Plant Sinopodophyllum hexandrum
by
Lin Xu, Penghui Guo, Wen Luo, Zhihong He, Aiai Ma, Hanyue Wang, Xinru Chen and Liqin Na
Diversity 2026, 18(1), 24; https://doi.org/10.3390/d18010024 - 31 Dec 2025
Abstract
Artificial cultivation of the endangered medicinal plant Sinopodophyllum hexandrum is a key strategy for resource protection and supply, yet cultivation can cause soil degradation and microbial disorder, while the effect of cultivation on the microbial community and its relationship with soil nutrients remains
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Artificial cultivation of the endangered medicinal plant Sinopodophyllum hexandrum is a key strategy for resource protection and supply, yet cultivation can cause soil degradation and microbial disorder, while the effect of cultivation on the microbial community and its relationship with soil nutrients remains unclear. This study aimed to explore the effects of artificial cultivation on the soil–microorganism–nutrient cycling system of Sinopodophyllum hexandrum, a rare medicinal plant. We compared three groups (Native-wild, Mix-wild, Mix-cultivated) by analyzing soil physicochemical properties, microbial diversity, community structure, co-occurrence networks, and multi-nutrient cycling drivers. Geographic position drove spatial (landscape scale) heterogeneity of soil nutrients, while cultivation shaped its vertical (soil depth) counterpart. Cultivation altered the natural vertical nutrient pattern via surface fertilization, causing nutrient surface retention. Microbial communities exhibited wild-specific/cultivation-specific responses, bacteria were slightly more sensitive to cultivation effect than fungi. Cultivation altered microbial network complexity depending on the host and increased instability, with only bacterial network associations correlating with soil factors. Fungal diversity and specific taxa became core drivers of multi-nutrient cycling. This study clarifies cultivation’s regulatory mechanism on S. hexandrum’s soil–microorganism system, providing a basis for optimizing cultivation management and protecting this endangered species.
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(This article belongs to the Section Microbial Diversity and Culture Collections)
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The Effects of Short-Term Warming on Plant Diversity and Ecosystem Multifunctionality in Alpine Grasslands
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Jianghao Cheng, Junxi Wu, Zekai Kong, Mingxue Xiang, Yanjie Zhang, Zhaoqi Wang, Fangfang Shi, Junye Wu, Xuhui Ding and Chunli Li
Diversity 2026, 18(1), 23; https://doi.org/10.3390/d18010023 - 30 Dec 2025
Abstract
Climate warming is one of the most pressing global changes, with profound consequences for biodiversity, ecosystem functioning, and the provision of ecosystem services. Although warming is expected to alter soil nutrient cycling and plant community structure, the mechanisms through which it reshapes ecosystem
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Climate warming is one of the most pressing global changes, with profound consequences for biodiversity, ecosystem functioning, and the provision of ecosystem services. Although warming is expected to alter soil nutrient cycling and plant community structure, the mechanisms through which it reshapes ecosystem multifunctionality (EMF) remain insufficiently understood. Here, we conducted a 3-year field warming experiment in an alpine grassland to assess how warming influences plant diversity, soil nutrients, and their joint effects on EMF. We found that plant α-diversity declined in both control and warming groups in 2021 and partially recovered by 2023, though recovery was weaker under warming. In contrast, β-diversity (turnover) showed a continuous increasing trend under warming across years, although differences from the control were not statistically significant. EMF, evaluated with single- and multi-threshold approaches, exhibited a consistent decline, with warming accelerating this reduction and producing more complex bimodal fluctuations within intermediate threshold ranges (55–75% and 80–90%). Warming also restructured the functional drivers of EMF: soil organic carbon (SOC) and available nitrogen (AN) emerged as dominant regulators, whereas the contributions of total nitrogen and turnover weakened. Collectively, these findings demonstrate that warming not only alters biodiversity patterns and ecosystem functions but also reshapes the soil–plant–function feedbacks that sustain EMF. By identifying SOC and AN as critical mediators, this study highlights a mechanistic pathway through which climate warming may undermine ecosystem resilience and long-term sustainability, providing insights essential for predicting terrestrial ecosystem responses under future climate scenarios.
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(This article belongs to the Section Plant Diversity)
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Species Composition and New Records of Epiphytic Diatoms on Seagrass Zostera marina from Qingdao Bay, China
by
Lang Li, Jiachang Lu, Xianling Qin, Yuhang Li and Junxiang Lai
Diversity 2026, 18(1), 22; https://doi.org/10.3390/d18010022 - 30 Dec 2025
Abstract
Epiphytes significantly contribute to the overall primary productivity of seagrass beds. Among them, diatoms are the most diverse and important component of the epiphytic community in seagrass beds. However, studies on this group of diatoms are still limited in China. In this research,
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Epiphytes significantly contribute to the overall primary productivity of seagrass beds. Among them, diatoms are the most diverse and important component of the epiphytic community in seagrass beds. However, studies on this group of diatoms are still limited in China. In this research, we investigated the epiphytic diatoms on Zostera marina Linnaeus from Qingdao Bay on the western coast of the Yellow Sea. A total of 112 taxa belonging to 31 families and 57 genera were morphologically identified, of which 16 taxa were newly recorded in China. Each taxon was illustrated with corresponding light micrographs. The most common genera were Navicula Bory with 12 taxa, Amphora (Ehrenberg) Kützing with 10 taxa, and Nitzschia Hassall with 10 taxa. Notably, species of Cocconeis Ehrenberg were ubiquitous and found in every sample. Based on our observations, the sediment is proposed as a likely source of these epiphytic communities. None of the newly recorded diatoms had been previously reported as epiphytes on seagrasses. Our results improve the understanding of species diversity and distribution of seagrass epiphytic diatoms along the coasts of China.
Full article
(This article belongs to the Special Issue Phytoplankton Communities and Their Microbial Associates Under Climate Change and Anthropogenic Pressures)
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Unveiling Microalgal Diversity in Slovenian Transitional Waters (Adriatic Sea): A First Step Toward Ecological Status Assessment
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Petra Slavinec, Janja Francé, Ana Fortič and Patricija Mozetič
Diversity 2026, 18(1), 21; https://doi.org/10.3390/d18010021 - 29 Dec 2025
Abstract
This study presents the first comprehensive assessment of microalgal diversity in two Slovenian transitional waters (TWs): the shallow brackish lagoon of the Škocjanski Zatok Nature Reserve (SZNR) and the Rižana River estuary within the Port of Koper (PK) area. Between 2018 and 2021,
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This study presents the first comprehensive assessment of microalgal diversity in two Slovenian transitional waters (TWs): the shallow brackish lagoon of the Škocjanski Zatok Nature Reserve (SZNR) and the Rižana River estuary within the Port of Koper (PK) area. Between 2018 and 2021, water samples collected with a phytoplankton net were analyzed using light and scanning electron microscopy. In total, 240 species from 117 genera were identified in TW, dominated by diatoms and dinoflagellates, surpassing the diversity at a marine coastal station (91 species, 59 genera). Species richness was higher in PK (226) than in SZNR (154), mainly due to dinoflagellates and coccolithophores. Marine taxa predominated along the salinity gradient, with moderate contributions from brackish taxa and few freshwater forms, reflecting both natural and anthropogenic influences. Planktonic taxa dominated at all sites, while benthic forms were abundant in the lagoon, particularly in spring. Thirty-two taxa were recorded for the first time in Slovenian TW, mostly benthic or tychopelagic diatoms. The detection of Coolia monotis and five cyanobacterial genera with potentially harmful traits highlights the role of TW as an ecological interface. The taxonomic sufficiency analysis showed that the order level is sufficient to distinguish transitional from marine assemblages, beyond which ecological information is lost. Overall, this study highlights the importance of detailed taxonomic resolution for detecting microalgal diversity, including harmful and non-indigenous species to ensure robust ecological assessments under the WFD and MSFD directives.
Full article
(This article belongs to the Special Issue Phytoplankton Communities and Their Microbial Associates Under Climate Change and Anthropogenic Pressures)
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Revealing the Diversity and Varietal Relationships of Regional Cacao and Close Relatives in the Northwestern Colombian Amazon: Insights for Conservation and Agroforestry Resilience
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Armando Sterling, Félix H. Polo-Munar, Ginna P. Velasco-Anacona, Diego F. Caicedo-Rodríguez, Sebastián Valderrama-Cuspian, Sidney do Rosário Costa, Juan C. Suárez-Salazar and Carlos H. Rodríguez-León
Diversity 2026, 18(1), 20; https://doi.org/10.3390/d18010020 - 27 Dec 2025
Abstract
Understanding the genetic diversity and structure of regional cacao and its close relatives is essential for strengthening conservation strategies and enhancing the resilience of Amazonian agroforestry systems. This study evaluated the genetic diversity, population structure, and varietal relationships of 48 sexually derived regional
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Understanding the genetic diversity and structure of regional cacao and its close relatives is essential for strengthening conservation strategies and enhancing the resilience of Amazonian agroforestry systems. This study evaluated the genetic diversity, population structure, and varietal relationships of 48 sexually derived regional accessions of Theobroma cacao, T. grandiflorum, and T. bicolor with desirable morpho-agronomic traits, together with eight universal T. cacao reference clones, all cultivated in farmer-managed agroforests of the northwestern Colombian Amazon, using a panel of 15 SSR markers. The loci exhibited substantial allelic richness (mean Na = 8.53) and consistently high expected heterozygosity (Hexp = 0.74), with numerous private alleles indicating species- and lineage-specific divergence. Bayesian clustering, ΔK inference, and minimum spanning networks identified four genetically coherent subpopulations corresponding to the three species and a distinct lineage within T. cacao, strongly aligned with the discriminant analysis of principal components (DAPC) results. Analysis of Molecular Variance (AMOVA) revealed that most genetic variation occurred among subpopulations (56.68%), while pairwise FST (Wright’s fixation index) values confirmed strong interspecific differentiation and significant divergence within T. cacao. No isolation-by-distance pattern was detected. These findings demonstrate that regional Theobroma germplasm maintained in smallholder agroforests constitutes a valuable reservoir of genetic diversity that complements universal reference clones. By documenting species-level divergence and lineage-specific variation, this study supports the integration of farmer-managed genetic resources into conservation planning and highlights their importance for the long-term resilience of Amazonian cacao-based agroforestry landscapes.
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(This article belongs to the Special Issue Genetic Diversity, Breeding and Adaption Evolution of Plants)
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Climate Refugia of Endangered Mammals in South Korea Under SSP Climate Scenarios: An Ensemble Species Distribution Modeling Approach
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Jae-Ho Lee, Man-Seok Shin, Eun-Seo Lee, Jae-Seok Lee and Chang-Wan Seo
Diversity 2026, 18(1), 19; https://doi.org/10.3390/d18010019 - 26 Dec 2025
Abstract
Climate change is expected to alter the distribution of many threatened mammals, yet national-scale identification of climate refugia and conservation priorities remains limited for South Korea. This study aimed to map current hotspots and future refugia for 10 endangered mammal species and evaluate
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Climate change is expected to alter the distribution of many threatened mammals, yet national-scale identification of climate refugia and conservation priorities remains limited for South Korea. This study aimed to map current hotspots and future refugia for 10 endangered mammal species and evaluate conservation implications under SSP climate scenarios. We compiled occurrence records from nationwide field surveys and protected-area monitoring and fitted ten species distribution models (GLM, GAM, GBM, CTA, ANN, SRE, FDA, MARS, RF, and MaxEnt) using biomod2 with climatic, topographic, and anthropogenic predictors at 1 km resolution. A weighted ensemble model achieved strong predictive performance (mean AUC = 0.840). Current richness hotspots were concentrated along the Baekdudaegan mountain range, and several national parks emerged as core multi-species areas. Variable-importance analysis indicated that topographic constraints (elevation and slope) dominated for most species, consistent with mountain-dependent habitat use. Future projections showed relatively stable richness patterns under SSP2–4.5 but pronounced contractions under SSP5–8.5 by the 2070s, with persistent high-suitability areas converging in the northern Baekdudaegan. The resulting suitability and richness layers provide spatial decision-support for protected-area strengthening, connectivity-oriented management, and targeted monitoring to support national climate-adaptation planning.
Full article
(This article belongs to the Special Issue Bison and Beyond: Achievements and Problems in Wildlife Conservation)
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Resolving the Taxonomic Status of Chukotkan Snow Sheep (Ovis nivicola) Using Genome-Wide Single-Nucleotide Polymorphism (SNP) and Mitochondrial Data
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Arsen V. Dotsev, Dennis I. Litovka, Innokentiy M. Okhlopkov, Tatiana E. Deniskova, Veronika R. Kharzinova, Olga A. Koshkina, Neckruz F. Bakoev, Nikolai V. Mamaev, Taras P. Sipko, Andrey A. Sitsko, Maria N. Semerikova, Darren K. Griffin, Michael N. Romanov and Natalia A. Zinovieva
Diversity 2026, 18(1), 18; https://doi.org/10.3390/d18010018 - 25 Dec 2025
Abstract
The intraspecific taxonomy of snow sheep (Ovis nivicola) is one of the most controversial issues in Caprinae systematics. Although eight subspecies have been described using morphological traits, the validity of several taxa, particularly those in the eastern part of their geographical
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The intraspecific taxonomy of snow sheep (Ovis nivicola) is one of the most controversial issues in Caprinae systematics. Although eight subspecies have been described using morphological traits, the validity of several taxa, particularly those in the eastern part of their geographical range, remains disputed. We investigated the phylogenetic relationships and genetic diversity of snow sheep in the Chukotka Autonomous Okrug using genome-wide single-nucleotide polymorphism (SNP) data (935 loci after filtering) and complete mitochondrial genomes from 57 individuals collected across the Russian Far East (Chukotka Autonomous Okrug, Kamchatka Krai, Magadan Oblast, and Republic of Sakha (Yakutia)). Post SNP-genotyping nuclear genomic studies using principal component analysis (PCA), ADMIXTURE, pairwise FST and Neighbor-Net revealed two clearly differentiated groups within Chukotka. One included individuals from the Koryak Mountains that are genetically indistinguishable from the Koryak subspecies (O. n. koriakorum) of northern Kamchatka. The other one encompassed individuals from the Anadyr Plateau and the Chukotka Mountains cluster with the Okhotsk subspecies (O. n. alleni) of the Kolyma Mountains. Bayesian phylogeny of complete mitochondrial genomes fully corroborated the nuclear results: Koryak Mountains samples formed a monophyletic clade, while Anadyr–Chukotka samples grouped with Kolyma Mountains individuals. Genetic diversity indices (UHE, AR, FIS) in both Chukotka groups were comparable to other studied populations and showed no signs of inbreeding depression. Our results provide important insights and can be used to develop science-based strategies for preserving the population-genetic diversity of snow sheep.
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(This article belongs to the Special Issue 15th Anniversary of Diversity—Biodiversity, Conservation and Ecology of Animals, Plants and Microorganisms)
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Response of Rodent Metacommunities in Desert Areas to Fluctuations in Climatic Conditions
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Rong Zhang, Xin Li, Suwen Yang, Yongling Jin, Linlin Li, Shuai Yuan, Heping Fu and Xiaodong Wu
Diversity 2026, 18(1), 17; https://doi.org/10.3390/d18010017 - 25 Dec 2025
Abstract
Rodents, as a core component of desert ecosystems and an important indicator of environmental changes, are ideal subjects for studying the impacts of fluctuations in climatic conditions on wildlife. Based on field data from the southern Alxa Desert (2014–2020), this study constructed an
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Rodents, as a core component of desert ecosystems and an important indicator of environmental changes, are ideal subjects for studying the impacts of fluctuations in climatic conditions on wildlife. Based on field data from the southern Alxa Desert (2014–2020), this study constructed an ecosystem structure network integrating local/metacommunities, climate, soil, and plant communities. Combined with structural equation modeling, we explored the response mechanisms of rodent communities to climatic conditions across multiple scales. The results showed the following: the α-diversity of local and metacommunities exhibited convergent seasonal patterns, with greater impacts from human disturbances than interannual effects, as well as coexisting species turnover and nesting in metacommunities. Precipitation directly affected metacommunity abundance and diversity and indirectly influenced both community types via vegetation, while temperature directly regulated community characteristics; metacommunities were formed via the coupling of local communities through species migration and habitat filtering, reflecting complex links between local and regional processes. This research provides scientific support for predicting desert ecosystem dynamics and guiding conservation management.
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(This article belongs to the Collection Feature Papers in Animal Diversity)
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Genome-Resolved Metagenomics of Microbes from the Atoud Dam, Southwestern Saudi Arabia
by
Fatmah M. Alqahtani
Diversity 2026, 18(1), 16; https://doi.org/10.3390/d18010016 - 25 Dec 2025
Abstract
Artificial freshwater bodies receive elemental inputs and face environmental stressors, posing a risk of wetland pollution that could threaten ecological health. In such an inland backwater, its microbial diversity and functional potentials remain uncharacterized. Here, shotgun metagenomic sequencing was performed on environmental DNA
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Artificial freshwater bodies receive elemental inputs and face environmental stressors, posing a risk of wetland pollution that could threaten ecological health. In such an inland backwater, its microbial diversity and functional potentials remain uncharacterized. Here, shotgun metagenomic sequencing was performed on environmental DNA samples collected from the Atoud Dam reservoir in southwestern Saudi Arabia. The taxonomic assignments of the sequencing reads identified Pseudomonadota and Actinomycetota as the dominant phyla, while the most prevalent species was Microcystis aeruginosa. Binning assembled contigs recovered 30 metagenome-assembled genomes representing 11 phyla, suggesting potentially novel bacterial taxa and metabolic functions. Functional analysis of gene-coding sequences identified genes associated with mobile genetic elements and xenobiotic biodegradation pathways as the main factors driving the spread of antibiotic resistance genes. Additionally, a community-wide analysis of enzyme-encoding genes involved in regulating the carbon, nitrogen, and sulfur cycles revealed significant annotation of denitrification and thiosulfate oxidation pathways under anoxic conditions, suggesting early signs of eutrophication and a potential risk of algal blooms. Overall, our study provides detailed insights into the genomic capabilities of the microbial community in this previously understudied ecosystem and establishes baseline data for future assessments of microbial biodiversity in other, less-explored ecosystems, thereby facilitating more effective biomonitoring and discovery.
Full article
(This article belongs to the Special Issue Microbial Community Dynamics and Ecological Functions in Wetlands)
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Open AccessArticle
The Influence of Prey Distribution on the Search Strategies for Foraging Desert Grassland Whiptails, Aspidoscelis uniparens
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Douglas A. Eifler, Margaret C. Stanley, Darren F. Ward, Makenna M. Orton and Maria A. Eifler
Diversity 2026, 18(1), 15; https://doi.org/10.3390/d18010015 - 25 Dec 2025
Abstract
The optimal search strategy for foraging animals can vary based on environmental parameters, which can include information about the spatial distribution of prey. We tested the hypothesis that natural populations of foraging desert grassland whiptails (Aspidoscelis uniparens) structure their search strategies
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The optimal search strategy for foraging animals can vary based on environmental parameters, which can include information about the spatial distribution of prey. We tested the hypothesis that natural populations of foraging desert grassland whiptails (Aspidoscelis uniparens) structure their search strategies according to resource distribution. We experimentally provisioned prey in uniform, aggregated, and random distributions to characterize search effort (moves per minute and percent time moving) and search path (turn angles, movement duration, path straightness, step length, and two-step sequences). The search effort did not vary with treatment but animals adjusted their search path based on the presence and distribution of supplemental prey. With uniformly distributed prey, foragers took longer step lengths and more frequently engaged in two-step sequences that included long step lengths. When prey were randomly distributed, foragers made more moves of long duration and fewer straight moves, often pairing short step lengths with large turns. With an aggregated prey distribution, foragers had more moves of very short duration. Examining detailed search path characteristics can identify responses to environmental changes. Under experimental conditions, the search strategies of A. uniparens indicated behavioral responses to food distribution that could improve search efficiency.
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(This article belongs to the Special Issue Biogeography, Ecology and Conservation of Reptiles)
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Foraging Environment Shapes the Gut Microbiota of Two Crane Species in the Yellow River Delta Wetland
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Xiaodong Gao, Yunpeng Liu, Bo Zhou, Jingyi Yu, Lei Li, Qingming Wu, Jun Wang and Shuai Shang
Diversity 2026, 18(1), 14; https://doi.org/10.3390/d18010014 - 25 Dec 2025
Abstract
The foraging environment is a critical source of microbes for wild birds, yet its role in shaping the gut microbiota of sympatric crane species remains poorly understood. This study investigated this relationship in the Yellow River Delta wetland by analyzing the microbial communities
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The foraging environment is a critical source of microbes for wild birds, yet its role in shaping the gut microbiota of sympatric crane species remains poorly understood. This study investigated this relationship in the Yellow River Delta wetland by analyzing the microbial communities of paired foraging environments and fecal samples from Common Cranes (Grus grus) and White Cranes (Grus leucogeranus) via 16S rRNA gene sequencing. Significant inter-group differences in alpha diversity (ACE, Chao1, Shannon, Simpson) indicated strong environmental filtering effects. Beta diversity (PCoA) revealed pronounced segregation between foraging and fecal samples (PC1 = 25.0%), underscoring a significant microbial turnover between the environment and the gut. Dominant phyla included Proteobacteria (24.6–37.4%), Firmicutes (4.8–29.0%), and Actinobacteriota (12.4–23.3%). LEfSe identified genus-level biomarkers highly specific to sample type and host, including Ligilactobacillus (12.1% in Common Crane feces) and Cryobacterium (9.2% in White Crane feces). SourceTracker analysis indicated that >70% of gut microbial sources remained unknown, suggesting a vast uncharacterized environmental reservoir. Functional prediction highlighted group-specific adaptations, such as elevated amino acid transport metabolism in Common Cranes (9.8% vs. 7.1%; p < 0.05), potentially linked to local dietary resources. Our findings demonstrate that the gut microbiota of cranes is synergistically shaped by host-specific factors and the unique saline–alkaline foraging environment of the wetland.
Full article
(This article belongs to the Topic Ecology, Management and Conservation of Vertebrates: 2nd Edition)
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Drivers of Variation in Avian Community Composition Across a Tropical Island Montane Elevational Gradient
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Hannah Woods, Alan Barclay and Huw Lloyd
Diversity 2026, 18(1), 13; https://doi.org/10.3390/d18010013 - 24 Dec 2025
Abstract
Elevational variation in avian community composition can be significantly influenced by habitat degradation, fragmentation and secondary forest growth. Few studies have identified the drivers of changes in bird community composition across disturbed montane elevational gradients of smaller tropical islands. We examined patterns of
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Elevational variation in avian community composition can be significantly influenced by habitat degradation, fragmentation and secondary forest growth. Few studies have identified the drivers of changes in bird community composition across disturbed montane elevational gradients of smaller tropical islands. We examined patterns of avian diversity using long-term mist-net data (2008–2014) across three different forest elevations along a tropical montane elevational gradient in the Northern Range of Trinidad, West Indies. All three sites (lowland mature secondary forest, mid-elevation highly disturbed secondary forest, and undisturbed high elevation forest) were found to have distinctive bird communities. Turnover rather than nestedness explained most of the total dissimilarity between sites. Whilst some turnover could be attributed to elevation, changes to diversity at the mid-elevation site result more from local habitat heterogeneity related to human activities and secondary growth, with increased species richness attributable to habitat-generalist species indicative of disturbance. Significant anti-nestedness in species occupancy was observed, underpinned by the loss of ground-dwelling and understory insectivores from the mid-elevation site. Differences in bird community composition, in contrast, were driven by the abundance of specialist nectarivores in the highest elevation undisturbed montane forest, and by generalist nectarivores and frugivores at lower elevations.
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(This article belongs to the Special Issue Avian Ecology and Diversity, Population Monitoring and Conservation II: Recent Advances and New Challenges)
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Open AccessArticle
Spring Detection Patterns of Eurasian Woodcock (Scolopax rusticola) in Hungary Between 2009–2024: Long-Term Trends of Distribution and Conservation Implications
by
Itumeleng Kwena Malatji, Mabel Narh, Sándor Csányi and Gergely Schally
Diversity 2026, 18(1), 12; https://doi.org/10.3390/d18010012 - 24 Dec 2025
Abstract
The Eurasian woodcock (Scolopax rusticola) is a migratory game bird of ecological, cultural, and hunting importance in Europe. While globally listed as Least Concern, concerns remain over hunting pressure and limited ecological data. In Hungary, the species occurs regularly during spring
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The Eurasian woodcock (Scolopax rusticola) is a migratory game bird of ecological, cultural, and hunting importance in Europe. While globally listed as Least Concern, concerns remain over hunting pressure and limited ecological data. In Hungary, the species occurs regularly during spring and autumn migration and breeds in low numbers. To provide evidence-based management, the Hungarian Woodcock Monitoring Program was launched in 2009. This study evaluates spatial and temporal patterns of woodcock presence in Hungary using standardized roding surveys conducted between 2009 and 2024. Observations were assigned to 10 × 10 km grid cells, with 180 cells consistently sampled over the 16-year period. Detection rates were analyzed, defining “high-abundance” as five or more individuals recorded per session. Interannual dynamics were tested using correlation analyses, and spatial clustering was assessed with spatial autocorrelation. Woodcocks were detected in an average of 94.38% of surveyed cells annually (±3.88% SD), indicating a stable and widespread presence. High-abundance detections were lower ( = 50.56%) and more variable (±10.71% SD) but consistently concentrated in specific areas, highlighting the importance of regional stopover habitats. No significant long-term trend was observed, suggesting population stability. These results confirm Hungary’s key role in the spring migration corridor and underline the value of long-term monitoring for reconciling traditional hunting with conservation objectives.
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(This article belongs to the Special Issue Perspectives on Small Game Research for Biodiversity Conservation and Sustainable Resource Management)
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Open AccessArticle
Bird Species Diversity and Community Structure Across Southern African Grassland Types
by
Grzegorz Kopij
Diversity 2026, 18(1), 11; https://doi.org/10.3390/d18010011 - 23 Dec 2025
Abstract
Grasslands occupy 24% of the Earth’s surface. In most areas of the world these are either destroyed, fragmented or converted into cultivated fields. In Africa, their biodiversity is still insufficiently known. This study reports on the avian assemblages associated with grasslands in South
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Grasslands occupy 24% of the Earth’s surface. In most areas of the world these are either destroyed, fragmented or converted into cultivated fields. In Africa, their biodiversity is still insufficiently known. This study reports on the avian assemblages associated with grasslands in South African Highveld and Lesotho Drakensberg. Special attention was paid to the species richness, diversity, and population densities and dominance of particular species. Birds were counted by means of the Line Transect Method in three distinguished grassland types: Dry Cymbopogon-Themeda Grassland (transect length: 28 km), Wet Cymbopogo-Themeda Grassland (27 km) km, and Mountain Themeda-Festuca Grassland (31 km). In total, 86 bird species were recorded. While cumulative dominance was similar between the Dry and Wet Grassland (61–65%), these two were much different from that in the Mountain Grassland (46%). However the dominance index was similar in all three grassland types compared (0.25–0.33). Only one species, the long-tailed widow Euplectes orix was a common dominant species for all three grassland types. African stonechat, wing-snapping cisticola Cisticola ayresii, Levaillant’s cisticola Cisticola tinniens and yellow bishop Euplectes capensis were dominant only in the Mountain Grassland; northern black korhaan Afrotis afroides and the eastern clapper lark Mirafra fasciolata—only in the Dry and Wet Grassland; ostrich Struthio camelus, cloud cisticola Cisticola textrix, African quailfinch Ortygozpiza atricollis and pied starling Spreo bicolor—only in the Dry Grassland, while the helmeted guineafowl Numida meleagris, zitting cisticola Cisticola juncidis and African pipit Anthus cinnamomeus—only in the Wet Grassland. Despite these obvious differences in dominance and population densities of species, Diversity and evenness indices were similar in all three grassland types. Shannon’s Diversity Index (H′) varied between 1.22 and 1.35; Simpson Diversity Index between 0.91 and 0.94, while Pielou’s Evenness Index (J′) varied between 0.33 and 0.36. However, Sørensen Similarity Index between the three grassland types was low, ranging between 0.07 and 0.26. Proportions of ecological guilds were similar in the Dry and Wet Grassland but differed from mountain Grassland. In comparison with other tropical grassland, avian communities in southern Africa are characterized by higher species richness and higher its variance between particular grassland types.
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(This article belongs to the Special Issue Avian Diversity in Forest and Grassland—2nd Edition)
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Open AccessArticle
Species-Specific Transcriptome in Xerophytes Atriplex halimus (L.) and Atriplex leucoclada (Boiss.)
by
Monther T. Sadder, Mohammad Brake, Mohammad K. Al-Rifaee, Mahfouz M. Abu-Zanat, Saeid Abu-Romman, Anas Musallam, Mohammad A. Alabdallah, Bayan Alkharabsheh, Fatima A. Bani Khaled, Abdulrahman K. Kharouf, Seif D. Alsuraikhat, Hutheyfah Al-Sawalmah and Hassan R. Hamasha
Diversity 2026, 18(1), 10; https://doi.org/10.3390/d18010010 - 23 Dec 2025
Abstract
Climate change and global warming are deeply impacting natural foraging dependent upon rain fall. To understand how xerophytes cope with these dramatic changes, comparative transcriptomic profiling of Atriplex halimus and Atriplex leucoclada was investigated under drought stress. The data revealed both shared and
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Climate change and global warming are deeply impacting natural foraging dependent upon rain fall. To understand how xerophytes cope with these dramatic changes, comparative transcriptomic profiling of Atriplex halimus and Atriplex leucoclada was investigated under drought stress. The data revealed both shared and species-specific adaptive mechanisms. Differentially expressed genes (DEGs) clustered into major conserved gene families, including stress signaling, transcriptional regulation, antioxidant defense, metabolism, transport, and hormone signaling. In A. halimus, drought tolerance was characterized by strong transcriptional regulation, redox balance, and energy homeostasis, highlighted by the up-regulation of WRKY, MYB, and SET-domain transcription factors, calcium transporters, SnRK1 kinases, and stress-protective proteins such as HSPs and LEAs. On the other hand, A. leucoclada exhibited broader signaling flexibility and structural reinforcement through enrichment of MAPKs, CDPKs, 14-3-3 proteins, and cell wall-modifying enzymes (XTHs, expansins, chitinase-like proteins), as well as high expression of transporters and hormone-responsive genes. Such patterns indicated distinct drought adaptation strategies: A. halimus relied on rapid transcriptional and redox adjustments suited for fluctuating moisture regimes, while A. leucoclada employed multi-layered, constitutive defenses for persistent arid conditions. Together, these results elucidate complementary molecular strategies enabling ecological divergence and drought resilience among closely related halophytes.
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(This article belongs to the Special Issue Genetic Diversity, Breeding and Adaption Evolution of Plants)
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Open AccessArticle
Phytoplankton Diversity and Community Stability Under Nutrient Reduction and Early-Stage Ecological Regulation in a Large Eutrophic Lake
by
Fen Zhang, Ruiying Yang, Haiyan Liu, Chenhao Dong, Zhan Hao, Zhaosheng Chu and Tianhao Wu
Diversity 2026, 18(1), 9; https://doi.org/10.3390/d18010009 - 22 Dec 2025
Abstract
Many lakes worldwide, including in China’s Yangtze River Basin, face eutrophication, which reduces phytoplankton diversity and increases bloom risk. Following severe pollution, these Chinese lakes have undergone substantial control and regulation. However, the efficacy of these measures is still unclear. Focusing on Lake
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Many lakes worldwide, including in China’s Yangtze River Basin, face eutrophication, which reduces phytoplankton diversity and increases bloom risk. Following severe pollution, these Chinese lakes have undergone substantial control and regulation. However, the efficacy of these measures is still unclear. Focusing on Lake Chaohu as a representative case, this study investigated the seasonal phytoplankton dynamics (2022–2023) under concurrent nutrient reduction and a fishing ban. The annual mean concentrations of total nitrogen, total phosphorus, and chlorophyll a were 1.57 mg/L, 0.184 mg/L, and 21.21 μg/L, respectively. The phytoplankton community was dominated by Cyanobacteria, which constituted approximately 75% of the total biomass. Co-occurrence network analysis revealed lower community stability during these warm, Cyanobacteria-dominated periods. Statistical analyses identified total phosphorus and temperature as key drivers, confirming bottom-up control via nutrient limitation as the fundamental mechanism. However, extreme heat events may have partly offset the benefits of nutrient reduction by promoting cyanobacterial dominance, which can decrease phytoplankton diversity. A recorded decrease in phytoplankton phosphorus use efficiency after the fishing ban suggests a potential strengthening of top-down control. These findings highlight that sustained nutrient load reduction is essential to reduce cyanobacterial bloom risk, while continued enforcement of the fishing ban may enhance the regulatory effect of top-down control on cyanobacterial blooms, thereby improving the stability and diversity of phytoplankton communities.
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(This article belongs to the Section Freshwater Biodiversity)
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Open AccessArticle
Molecular and Morphological Analyses of the Ichthyoplankton Community in Yueqing Bay, China, Reveal High Species Diversity and Variation in Fish Spawning Activity
by
Rijin Jiang, Amiri Rajabu Mohamedi, Rui Yin, Tereza M. Magati, Yehoshafati Elton Anton, James Leonard Lusana and Yongjiu Chen
Diversity 2026, 18(1), 8; https://doi.org/10.3390/d18010008 - 22 Dec 2025
Abstract
Yueqing Bay in China supports important marine resources that sustain local fisheries and food security, but increasing anthropogenic pressures and natural environmental changes threaten its biodiversity. This study used morphological identification, COI DNA barcoding, and 12S DNA metabarcoding to assess ichthyoplankton composition and
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Yueqing Bay in China supports important marine resources that sustain local fisheries and food security, but increasing anthropogenic pressures and natural environmental changes threaten its biodiversity. This study used morphological identification, COI DNA barcoding, and 12S DNA metabarcoding to assess ichthyoplankton composition and fish spawning patterns. A total of 13,415 eggs and 17,291 larvae were collected using horizontal and vertical plankton nets. Morphological analysis identified 58 taxa, while molecular methods detected 21 species (COI) and 48 species (12S), with an overall total of 105 species from 78 genera and 42 families. Spawning activity showed clear seasonal and spatial patterns, with the highest abundance and diversity in spring and summer, particularly around Ximen Island and the Bay mouth. These areas function as key spawning and nursery grounds. 12S DNA metabarcoding contributed strongly to species detection, especially for cryptic and morphologically indistinguishable larvae, complementing traditional surveys. The findings provide essential baseline information for monitoring fish stocks, protecting critical habitats, and improving fishery management strategies under increasing anthropogenic and climate-related pressures in Yueqing Bay.
Full article
(This article belongs to the Special Issue Marine Zooplankton and Ichthyoplankton Ecology: Patterns, Processes, and Perspective)
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