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Microbiology Research, Volume 14, Issue 1

2023 March - 33 articles

Cover Story: Plant–microbial interaction is a green and sustainable remediation technology for heavy metal-contaminated soil. The interaction between plant roots and microbial communities can significantly improve the microenvironment and promote plant growth in heavy metal-contaminated soil. In order to study the effects of species diversity on the rhizosphere microbial community, soil contaminated by heavy metals was restored using different cultivation modes. The symbiotic pattern of the rhizosphere microbial community was significantly improved under the dual planting mode. The positive correlation between the species was also significantly enhanced, which may be more conducive to plant remediation of heavy metal-contaminated soil. View this paper
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Articles (33)

  • Brief Report
  • Open Access
3 Citations
13,581 Views
6 Pages

Pekar et al. (2022) propose that SARS-CoV-2 was a zoonotic spillover that first infected humans in the Huanan Seafood Market in Wuhan, China. They propose that there were two separate spillovers of the closely related lineages A and lineage B in a sh...

  • Feature Paper
  • Article
  • Open Access
2 Citations
3,915 Views
18 Pages

Emergence of Nontuberculous Mycobacteria at the Human–Livestock–Environment Interface in Zambia

  • Mildred Zulu,
  • Sydney Malama,
  • Ngula Monde,
  • Henson Kainga,
  • Rabecca Tembo,
  • Florence Mwaba,
  • Shereen Ahmed Saad,
  • Victor Daka,
  • Andrew N. Mukubesa and
  • Musso Munyeme
  • + 2 authors

The prevalence of nontuberculous mycobacteria (NTM) infections and disease is rising worldwide due to increased research, diagnostics capabilities, and awareness of the disease. There is limited prevalence data for NTM from different sources in Zambi...

  • Review
  • Open Access
8 Citations
4,661 Views
21 Pages

Update on Mycochemical Profile and Selected Biological Activities of Genus Schizophyllum Fr. 1815

  • Jovana Mišković,
  • Milena Rašeta,
  • Nenad Krsmanović and
  • Maja Karaman

The aim of this systematic review was to investigate new research on the antioxidant, anti-acetylcholine, antimicrobial, and antitumor activity of genus Schizophyllum, as well as to describe the mycochemical profiles. A summary was made on the publis...

  • Review
  • Open Access
42 Citations
11,597 Views
19 Pages

How Do Diet Patterns, Single Foods, Prebiotics and Probiotics Impact Gut Microbiota?

  • Andrea Piccioni,
  • Marcello Covino,
  • Marcello Candelli,
  • Veronica Ojetti,
  • Annunziata Capacci,
  • Antonio Gasbarrini,
  • Francesco Franceschi and
  • Giuseppe Merra

The human gastrointestinal tract hosts a complex and dynamic population of commensal bacterial species, which have coevolved with the host, generating a symbiotic relationship. Some compounds present in foods, such as polyols, prebiotic fibers, or ph...

  • Article
  • Open Access
7 Citations
5,166 Views
19 Pages

Semi-VOCs of Wood Vinegar Display Strong Antifungal Activities against Oomycete Species Globisporangium ultimum and Pythium aphanidermatum

  • Ali Chenari Bouket,
  • Abolfazl Narmani,
  • Kasra Sharifi,
  • Shahram Naeimi,
  • Mohammad Reza Afshar Mogaddam,
  • Ali Asghar Hamidi,
  • Lenka Luptakova,
  • Faizah N. Alenezi and
  • Lassaad Belbahri

Plant disease outbreaks are increasingly exacerbated by climate change and the conditions of stress combinations. They are negatively affecting crop yield and driving threats to food security in many areas of the world. Although synthetic pesticides...

  • Article
  • Open Access
13 Citations
3,377 Views
16 Pages

Antiviral Potential of Selected N-Methyl-N-phenyl Dithiocarbamate Complexes against Human Immunodeficiency Virus (HIV)

  • Hazel T. Mufhandu,
  • Oluwafemi S. Obisesan,
  • Timothy O. Ajiboye,
  • Sabelo D. Mhlanga and
  • Damian C. Onwudiwe

Despite the use of highly active antiretroviral therapy approved by the United States Food and Drug Administration (FDA) for the treatment of human immunodeficiency virus (HIV) infection, HIV remains a public health concern due to the inability of th...

  • Article
  • Open Access
1 Citations
2,363 Views
12 Pages

E-2 Glycoprotein Structural Variations Analysed within the CSFV 2.2. Genogroup in a “Closed Grid” Sampling Study from Meghalaya, India

  • Priyanka Mukherjee,
  • Sandeep Ghatak,
  • Kekungo Puro,
  • Samir Das,
  • Arockiasamy Arun Prince Milton,
  • Probodh Borah,
  • Amit Chakroborty and
  • Arnab Sen

CSF is enzootic in most of pig-producing states, particularly in the NorthEastern (NE) region of India. In this study, a total of 249 sera and 190 tissue samples were collected from different parts of Meghalaya. Samples were processed by ELISA and RT...

  • Communication
  • Open Access
4 Citations
4,627 Views
10 Pages

In Vitro Screening of Antiviral Activity of Lactic Acid Bacteria Isolated from Traditional Fermented Foods

  • Ramize Hoxha,
  • Daniel Todorov,
  • Anton Hinkov,
  • Kalina Shishkova,
  • Yana Evstatieva and
  • Dilyana Nikolova

27 February 2023

Studies of newly isolated strains of lactic acid bacteria (LAB) are a good basis for expanding the potential for their applications in functional foods, probiotic food supplements, and other probiotic products. They exhibit various functional propert...

  • Article
  • Open Access
12 Citations
5,100 Views
17 Pages

Promotion of Peanut (Arachis hypogaea L.) Growth by Plant Growth-Promoting Microorganisms

  • Edvan Teciano Frezarin,
  • Carlos Henrique Barbosa Santos,
  • Luziane Ramos Sales,
  • Roberta Mendes dos Santos,
  • Lucas Amoroso Lopes de Carvalho and
  • Everlon Cid Rigobelo

24 February 2023

Brazil is an important peanut producer, but despite its high production, there still needs to be an inoculant for the peanut crop. In addition, the use of microorganisms that promote plant growth (PGPM) is not common, and this crop is highly dependen...

  • Article
  • Open Access
6 Citations
4,387 Views
19 Pages

Rhizopus oryzae Inulinase Production and Characterization with Application in Chicory Root Saccharification

  • Asmaa Abdella,
  • Mahmoud Al-Saman,
  • Fatma I. Abou-Elazm and
  • Shaymaa Wagdy El-Far

20 February 2023

The objective of this study was to create a fermentation process for the production of inulinase, an important enzyme with numerous applications in the food and pharmaceutical industries, using low-cost agricultural waste as substrates for Rhizopus o...

  • Article
  • Open Access
2 Citations
3,272 Views
8 Pages

Association between Multimorbidity and COVID-19 Mortality in Qatar: A Cross-Sectional Study

  • Khalid AbouGalala,
  • Basant Elsayed,
  • Mohamed Elmarasi,
  • Mona Kotob,
  • Reham Taha,
  • Fardous Abbasher,
  • Ahmed Amarah,
  • Mariam El Hamawi,
  • Soha S. Albayat and
  • Mohamed M. Emara
  • + 9 authors

20 February 2023

This study assessed the association between multimorbidity and mortality from COVID-19 in the Middle East and North Africa region, where such data are scarce. We conducted a cross-sectional study using data of all cases with COVID-19 reported to the...

  • Brief Report
  • Open Access
10 Citations
4,793 Views
10 Pages

Lactic Bacteria with Plant-Growth-Promoting Properties in Potato

  • Lilian Dutra Panetto,
  • Joyce Doria,
  • Carlos Henrique Barbosa Santos,
  • Edvan Teciano Frezarin,
  • Luziane Ramos Sales,
  • Luana Alves de Andrade and
  • Everlon Cid Rigobelo

17 February 2023

This study aimed to evaluate the abilities of three bacteria, Bacillus cereus, Succinovibrio dextrinosolvens, and Lactobacillus acidophilus, to fix nitrogen, solubilize phosphorus, and produce cellulosic and amylolytic enzymes. Then, these bacteria w...

  • Article
  • Open Access
10 Citations
5,641 Views
17 Pages

16 February 2023

Lactic acid bacteria are widely studied microorganisms and are one of the prevalent groups of bacteria in the oral cavity microbiome. This work aimed to isolate new lactic acid bacterial strains from the human oral cavity and evaluate their character...

  • Article
  • Open Access
27 Citations
3,218 Views
19 Pages

14 February 2023

With the rapid development of industry, Cr has become one of the major heavy metal pollutants in soil, severely impacting soil microecology, among which rhizosphere microorganisms can improve the soil microenvironment to promote plant growth. However...

  • Feature Paper
  • Article
  • Open Access
7 Citations
2,940 Views
14 Pages

The increasing production of industrial aromatic plant residues (IAPRs) are potentially environmental risky, and composting is a promising solution to resolve the coming IAPR problems. Carbon source degradation is a basic but important field in compo...

  • Article
  • Open Access
2 Citations
2,810 Views
11 Pages

Forces Governing the Transport of Pathogenic and Nonpathogenic Escherichia coli in Nitrogen and Magnesium Doped Biochar Amended Sand Columns

  • Katherine Quinn,
  • Sohrab Haghighi Mood,
  • Elizabeth Cervantes,
  • Manuel Garcia Perez and
  • Nehal I. Abu-Lail

Background: Access to safe drinking water remains a global issue with fecal indicator bacteria being major pollutants. Biochars offer low-cost adsorbents for bacterial pathogens. A fundamental understanding of how biochars interact with bacterial pat...

  • Article
  • Open Access
15 Citations
4,507 Views
13 Pages

Impact of Temperature on the Bioactive Compound Content of Aqueous Extracts of Humulus lupulus L. with Different Alpha and Beta Acid Content: A New Potential Antifungal Alternative

  • Ulin A. Basilio-Cortes,
  • Olivia Tzintzun-Camacho,
  • Onecimo Grimaldo-Juárez,
  • Dagoberto Durán-Hernández,
  • Adabella Suarez-Vargas,
  • Carlos Ceceña Durán,
  • Alexis Salazar-Navarro,
  • Luis A. González-Anguiano and
  • Daniel González-Mendoza

Hops contain a wide variety of polyphenolic compounds with diverse antimicrobial properties. This study aimed to evaluate the impact of temperature on the bioactive components of samples of aqueous extracts of hops with different characteristics. A c...

  • Review
  • Open Access
2 Citations
5,619 Views
15 Pages

Calcitonin (CT) and adrenomedullin (ADM) are members of the CT family. Procalcitonin (PCT) is a prohormone of CT. Elevations in serum PCT and ADM levels are associated with severe sepsis and coronavirus disease 2019 (COVID-19). PCT enhances sepsis mo...

  • Study Protocol
  • Open Access
3,694 Views
13 Pages

ESBL Displace: A Protocol for an Observational Study to Identify Displacing Escherichia coli Strain Candidates from ESBL-Colonized Travel Returners Using Phenotypic, Genomic Sequencing and Metagenome Analysis

  • Michael Schweitzer,
  • Alfredo Mari,
  • Tim Roloff,
  • Esther Künzli,
  • Stefanie Heller,
  • Diana Albertos Torres,
  • Marco Meola,
  • Danica Nogarth,
  • Leanid Laganenka and
  • Adrian Egli
  • + 7 authors

Introduction: Invading extended-spectrum beta-lactamase-producing Escherichia coli (ESBL-PE), non-ESBL E. coli, and other bacteria form a complex environment in the gut. The duration and dynamics of ESBL-PE colonization varies among individuals. Unde...

  • Article
  • Open Access
1 Citations
3,560 Views
16 Pages

Whole-Genome Sequence of Aeromonas spp. Isolated from a Dairy Farm in Central Texas

  • Toni L. Poole,
  • Wayne D. Schlosser,
  • Tawni L. Crippen,
  • Sonja L. Swiger,
  • Keri N. Norman and
  • Robin C. Anderson

This study investigated the presence of Aeromonas spp. on a dairy farm in central Texas that employed a free-stall management system. A total of 140 samples were collected from areas of two different barns. Twenty-two presumptive Aeromonas isolates w...

  • Article
  • Open Access
3 Citations
4,329 Views
13 Pages

Core Genome Sequencing Analysis of E. coli O157:H7 Unravelling Genetic Relatedness among Strains from Cattle, Beef, and Humans in Bishoftu, Ethiopia

  • Fanta D. Gutema,
  • Lieven De Zutter,
  • Denis Piérard,
  • Bruno Hinckel,
  • Hideo Imamura,
  • Geertrui Rasschaert,
  • Reta D. Abdi,
  • Getahun E. Agga and
  • Florence Crombé

E. coli O157:H7 is a known Shiga toxin-producing Escherichia coli (STEC), causing foodborne disease globally. Cattle are the main reservoir and consumption of beef and beef products contaminated with E. coli O157:H7 is an important source of STEC inf...

  • Review
  • Open Access
21 Citations
8,782 Views
16 Pages

Heterosigma akashiwo is a golden-brown unicellular phytoflagellate with a high potential to create harmful algal blooms (HABs) and kill fish in many coastal regions worldwide, resulting in significant economic losses. Climate change and global warmin...

  • Article
  • Open Access
7 Citations
5,794 Views
16 Pages

Potential Mammalian Vector-Borne Diseases in Live and Wet Markets in Indonesia and Myanmar

  • Vincent Nijman,
  • K. A. I. Nekaris,
  • Chris R. Shepherd,
  • Lucy Vigne,
  • Ahmad Ardiansyah,
  • Muhammad Ali Imron,
  • Qinyong Ni,
  • Katherine Hedger,
  • Marco Campera and
  • Thais Q. Morcatty

Vector-borne diseases spread from wild animals and their associated ectoparasites to humans and domesticated animals. Wildlife markets are recognized as important areas where this transfer can take place. We assessed the potential for spreading vecto...

  • Article
  • Open Access
2 Citations
3,657 Views
12 Pages

Between 2018 and 2021, several mastic trees (Pistacia lentiscus var. Chia) sampled in the field and the nursery of the Chios Mastiha Growers Association (CMGA) were analyzed to determine the cause of dominant diseases. Symptoms included defoliation,...

  • Communication
  • Open Access
7 Citations
3,117 Views
13 Pages

Characterization and Hydrocarbon Degradation Potential of Variovorax sp. Strain N23 Isolated from the Antarctic Soil

  • Jinyan Liu,
  • Zhisong Cui,
  • Tong Hao,
  • Yingchao Li,
  • Xiao Luan,
  • Ke Feng and
  • Li Zheng

Increasing pollution has significantly threatened the Antarctic ecosystem. The contamination of hydrocarbons has drawn a considerable amount of attention owing to their toxicity, recalcitrance, and persistence. Considering the Antarctic Treaty, only...

  • Review
  • Open Access
53 Citations
16,710 Views
11 Pages

The Current Level of MALDI-TOF MS Applications in the Detection of Microorganisms: A Short Review of Benefits and Limitations

  • Ali Haider,
  • Marianna Ringer,
  • Zsolt Kotroczó,
  • Csilla Mohácsi-Farkas and
  • Tamás Kocsis

The available literary data suggest the general applicability and benefits of the Matrix-assisted laser desorption/ionization (MALDI) time-of-flight (TOF) mass spectrometry (MS) in the field of microbiological identification. Due to its high reliabil...

  • Article
  • Open Access
7 Citations
3,106 Views
10 Pages

Background: D-dimer, generated upon the degradation of fibrin, is extensively used to detect thrombosis in various diseases. It is also explored as a marker for thrombosis in cases with COVID-19 disease. Few studies have confirmed its utility as a ma...

  • Communication
  • Open Access
3,287 Views
7 Pages

Detecting mecA in Faecal Samples: A Tool for Assessing Carriage of Meticillin-Resistant Staphylococci in Pets and Owners in the Microbiological ‘Fast Age’?

  • Siân-Marie Frosini,
  • Georgina Gallow,
  • Amanda Gibson,
  • Juliana Menezes,
  • Constança Pomba and
  • Anette Loeffler

Sampling animals for carriage of meticillin-resistant, coagulase-positive staphylococci (MRCoPS), considered zoonotic pathogens, can be challenging and time-consuming. Developing methods to identify mecA from non-invasive samples, e.g., faeces, would...

  • Review
  • Open Access
33 Citations
19,100 Views
18 Pages

Tick Diversity and Distribution of Hard (Ixodidae) Cattle Ticks in South Africa

  • Tsireledzo G. Makwarela,
  • Nkululeko Nyangiwe,
  • Tracy Masebe,
  • Sikhumbuzo Mbizeni,
  • Lucky T. Nesengani,
  • Appolinaire Djikeng and
  • Ntanganedzeni O. Mapholi

Ticks are amongst the important ectoparasites where livestock are concerned, as they adversely affect the animals through bloodsucking. In tropical and subtropical countries, they transmit pathogens such as babesiosis, theileriosis, ehrlichiosis, and...

  • Article
  • Open Access
3 Citations
3,626 Views
8 Pages

Treating type 2 diabetes (T2D) patients with sodium–glucose cotransporter 2 (SGLT2) inhibitors may be associated with an increased risk of urinary tract infections (UTIs), such as diabetes-induced asymptomatic bacteriuria. Pyuria—a condit...

  • Article
  • Open Access
1 Citations
3,899 Views
13 Pages

Serum PCR Diagnosis of Brucella melitensis Infection in Rev. 1 Vaccinated Sheep

  • Shubham Mathur,
  • Svetlana Bardenstein,
  • Daniel Cohen and
  • Menachem Banai

Serological diagnosis provides a robust and effective approach to monitoring and controlling small ruminant brucellosis. Brucella melitensis Rev. 1 is a live vaccine strain used in prophylactic vaccination against small ruminant brucellosis. Bec...

  • Review
  • Open Access
29 Citations
8,436 Views
20 Pages

Stenotrophomonas maltophilia and Its Ability to Form Biofilms

  • Gina García,
  • Jorge A. Girón,
  • Jorge A. Yañez and
  • María L. Cedillo

In the last ten years, Stenotrophomonas maltophilia has gained increasing interest as an important agent of infection, which is why it has come to be recognized as a serious cause of nosocomial infections related to bloodstream infections, pneumonia,...

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Microbiol. Res. - ISSN 2036-7481