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30 Results Found

  • Article
  • Open Access
21 Citations
6,610 Views
17 Pages

Comparative Mapping of the Macrochromosomes of Eight Avian Species Provides Further Insight into Their Phylogenetic Relationships and Avian Karyotype Evolution

  • Lucas G. Kiazim,
  • Rebecca E. O’Connor,
  • Denis M. Larkin,
  • Michael N. Romanov,
  • Valery G. Narushin,
  • Evgeni A. Brazhnik and
  • Darren K. Griffin

9 February 2021

Avian genomes typically consist of ~10 pairs of macro- and ~30 pairs of microchromosomes. While inter-chromosomally, a pattern emerges of very little change (with notable exceptions) throughout evolution, intrachromosomal changes remain relatively po...

  • Article
  • Open Access
13 Citations
6,168 Views
14 Pages

Karyotype Evolution and Genomic Organization of Repetitive DNAs in the Saffron Finch, Sicalis flaveola (Passeriformes, Aves)

  • Rafael Kretschmer,
  • Benilson Silva Rodrigues,
  • Suziane Alves Barcellos,
  • Alice Lemos Costa,
  • Marcelo de Bello Cioffi,
  • Analía del Valle Garnero,
  • Ricardo José Gunski,
  • Edivaldo Herculano Corrêa de Oliveira and
  • Darren K. Griffin

19 May 2021

The Saffron finch (Sicalis flaveola), a semi-domestic species, is tolerant of human proximity and nesting in roof spaces. Considering the importance of cytogenomic approaches in revealing different aspects of genomic organization and evolution, we pr...

  • Article
  • Open Access
8 Citations
5,107 Views
15 Pages

A Comprehensive Cytogenetic Analysis of Several Members of the Family Columbidae (Aves, Columbiformes)

  • Rafael Kretschmer,
  • Ivanete de Oliveira Furo,
  • Anderson José Baia Gomes,
  • Lucas G. Kiazim,
  • Ricardo José Gunski,
  • Analía del Valle Garnero,
  • Jorge C. Pereira,
  • Malcolm A. Ferguson-Smith,
  • Edivaldo Herculano Corrêa de Oliveira and
  • Rebecca E. O’Connor
  • + 2 authors

8 June 2020

The Columbidae species (Aves, Columbiformes) show considerable variation in their diploid numbers (2n = 68–86), but there is limited understanding of the events that shaped the extant karyotypes. Hence, we performed whole chromosome painting (w...

  • Review
  • Open Access
14 Citations
5,671 Views
26 Pages

A Bird’s-Eye View of Chromosomic Evolution in the Class Aves

  • Rebecca E. O’Connor,
  • Rafael Kretschmer,
  • Michael N. Romanov and
  • Darren K. Griffin

7 February 2024

Birds (Aves) are the most speciose of terrestrial vertebrates, displaying Class-specific characteristics yet incredible external phenotypic diversity. Critical to agriculture and as model organisms, birds have adapted to many habitats. The only extan...

  • Article
  • Open Access
4 Citations
1,814 Views
14 Pages

Cytological Analysis of Crossover Frequency and Distribution in Male Meiosis of Cardueline Finches (Fringillidae, Aves)

  • Ekaterina Grishko,
  • Lyubov Malinovskaya,
  • Anastasia Slobodchikova,
  • Artemiy Kotelnikov,
  • Anna Torgasheva and
  • Pavel Borodin

23 November 2023

Meiotic recombination is an important source of genetic diversity. Using immunolocalization of several meiotic proteins at the spreads of male pachytene cells, we estimated the number of recombination nodules per cell and their distribution along the...

  • Article
  • Open Access
4 Citations
3,228 Views
13 Pages

Cytogenetic Analysis of the Members of the Snake Genera Cylindrophis, Eryx, Python, and Tropidophis

  • Tomáš Charvát,
  • Barbora Augstenová,
  • Daniel Frynta,
  • Lukáš Kratochvíl and
  • Michail Rovatsos

1 July 2022

The recent discovery of two independently evolved XX/XY sex determination systems in the snake genera Python and Boa sparked a new drive to study the evolution of sex chromosomes in poorly studied lineages of snakes, where female heterogamety was pre...

  • Article
  • Open Access
4 Citations
3,291 Views
11 Pages

Differential Repeat Accumulation in the Bimodal Karyotype of Agave L.

  • Lamonier Chaves Ramos,
  • Mariana Báez,
  • Joerg Fuchs,
  • Andreas Houben,
  • Reginaldo Carvalho and
  • Andrea Pedrosa-Harand

15 February 2023

The genus Agave presents a bimodal karyotype with x = 30 (5L, large, +25S, small chromosomes). Bimodality within this genus is generally attributed to allopolyploidy in the ancestral form of Agavoideae. However, alternative mechanisms, such as the pr...

  • Article
  • Open Access
8 Citations
6,568 Views
15 Pages

Chromosome Painting in Neotropical Long- and Short-Tailed Parrots (Aves, Psittaciformes): Phylogeny and Proposal for a Putative Ancestral Karyotype for Tribe Arini

  • Ivanete De Oliveira Furo,
  • Rafael Kretschmer,
  • Patrícia C. M. O’Brien,
  • Jorge C. Pereira,
  • Analía Del Valle Garnero,
  • Ricardo J. Gunski,
  • Malcolm A. Ferguson-Smith and
  • Edivaldo Herculano Corrêa De Oliveira

10 October 2018

Most Neotropical Psittacidae have a diploid number of 2n = 70, and a dichotomy in chromosome patterns. Long-tailed species have biarmed macrochromosomes, while short-tailed species have telo/acrocentric macrochromosomes. However, the use of chromosom...

  • Article
  • Open Access
15 Citations
5,641 Views
11 Pages

Heterochiasmy and Sexual Dimorphism: The Case of the Barn Swallow (Hirundo rustica, Hirundinidae, Aves)

  • Lyubov P. Malinovskaya,
  • Katerina Tishakova,
  • Elena P. Shnaider,
  • Pavel M. Borodin and
  • Anna A. Torgasheva

24 September 2020

Heterochiasmy, a sex-based difference in recombination rate, has been detected in many species of animals and plants. Several hypotheses about evolutionary causes of heterochiasmy were proposed. However, there is a shortage of empirical data. In this...

  • Article
  • Open Access
8 Citations
4,341 Views
10 Pages

Cytogenetic Evidence Clarifies the Phylogeny of the Family Rhynchocyclidae (Aves: Passeriformes)

  • Rafael Kretschmer,
  • Ismael Franz,
  • Marcelo Santos de Souza,
  • Analía Del Valle Garnero,
  • Ricardo José Gunski,
  • Edivaldo Herculano Corrêa de Oliveira,
  • Rebecca E. O’Connor,
  • Darren K. Griffin and
  • Thales Renato Ochotorena de Freitas

4 October 2021

The phylogenetic position and taxonomic status of Rhynchocyclidae (Aves: Passeriformes) have been the subject of debate since their first description. In most models, Rhynchocyclidae represents a subfamily-level taxon placed within the Tyrant Flycatc...

  • Review
  • Open Access
74 Citations
9,751 Views
19 Pages

Karyotype Evolution in Birds: From Conventional Staining to Chromosome Painting

  • Rafael Kretschmer,
  • Malcolm A. Ferguson-Smith and
  • Edivaldo Herculano Correa De Oliveira

27 March 2018

In the last few decades, there have been great efforts to reconstruct the phylogeny of Neoaves based mainly on DNA sequencing. Despite the importance of karyotype data in phylogenetic studies, especially with the advent of fluorescence in situ hybrid...

  • Article
  • Open Access
30 Citations
6,325 Views
13 Pages

Chromosomal Analysis in Crotophaga ani (Aves, Cuculiformes) Reveals Extensive Genomic Reorganization and an Unusual Z-Autosome Robertsonian Translocation

  • Rafael Kretschmer,
  • Ricardo José Gunski,
  • Analía del Valle Garnero,
  • Thales Renato Ochotorena de Freitas,
  • Gustavo Akira Toma,
  • Marcelo de Bello Cioffi,
  • Edivaldo Herculano Corrêa de Oliveira,
  • Rebecca E. O’Connor and
  • Darren K. Griffin

22 December 2020

Although cytogenetics studies in cuckoos (Aves, Cuculiformes) have demonstrated an interesting karyotype variation, such as variations in the chromosome morphology and diploid number, their chromosome organization and evolution, and relation with oth...

  • Review
  • Open Access
37 Citations
7,310 Views
27 Pages

21 July 2020

Reptiles are notable for the extensive genomic diversity and species richness among amniote classes, but there is nevertheless a need for detailed genome-scale studies. Although the monophyletic amniotes have recently been a focus of attention throug...

  • Review
  • Open Access
38 Citations
6,930 Views
33 Pages

Why Do Some Vertebrates Have Microchromosomes?

  • Kornsorn Srikulnath,
  • Syed Farhan Ahmad,
  • Worapong Singchat and
  • Thitipong Panthum

24 August 2021

With more than 70,000 living species, vertebrates have a huge impact on the field of biology and research, including karyotype evolution. One prominent aspect of many vertebrate karyotypes is the enigmatic occurrence of tiny and often cytogenetically...

  • Review
  • Open Access
14 Citations
7,874 Views
14 Pages

8 November 2017

Amphibian and bird karyotypes typically have a complex organization, which makes them difficult for standard cytogenetic analysis. That is, amphibian chromosomes are generally large, enriched with repetitive elements, and characterized by the absence...

  • Article
  • Open Access
8 Citations
4,379 Views
16 Pages

Cytogenetic Analysis of the Bimodal Karyotype of the Common European Adder, Vipera berus (Viperidae)

  • Victor Spangenberg,
  • Ilya Redekop,
  • Sergey A. Simanovsky and
  • Oxana Kolomiets

16 December 2022

Vipera berus is the species with the largest range of snakes on Earth and one of the largest among reptiles in general. It is also the only snake species found in the Arctic Circle. Vipera berus is the most involved species of the genus Vipera in the...

  • Article
  • Open Access
932 Views
12 Pages

The Curious Case of Woodcreepers: Cytogenomic Evidence Based on the Position of NORs

  • Analía del Valle Garnero,
  • Vitor Oliveira de Rosso,
  • Hybraim Severo Salau,
  • Paulo Afonso Rosa de Lara,
  • Victoria Tura,
  • Fabiano Pimentel Torres and
  • Ricardo José Gunski

14 August 2025

Woodcreepers (Dendrocolaptinae) constitute a subfamily of Neotropical passerines currently recognized as a monophyletic group within Furnariidae. Although Furnariidae is one of the most diverse avian families in the Neotropics, cytogenetic data remai...

  • Article
  • Open Access
3 Citations
4,302 Views
7 Pages

Karyotype Organization of the Endangered Species Yellow Cardinal (Gubernatrix cristata)

  • Sandra Eloisa Bülau,
  • Rafael Kretschmer,
  • Ivanete de Oliveira Furo,
  • Edivaldo Herculano Correa de Oliveira and
  • Thales Renato Ochotorena de Freitas

27 October 2021

Karyotypic analyses have several applications in studies of chromosome organization, evolution, and cytotaxonomy. They are also essential to genome assembly projects. Here, we present for the first time the karyotype description of the endangered spe...

  • Article
  • Open Access
9 Citations
2,631 Views
12 Pages

6 February 2023

Among Meliponini species, c-heterochromatin can occupy large portions of chromosomes. This characteristic could be useful for understanding evolutionary patterns of satellite DNAs (satDNAs), although few sequences have been characterized in these bee...

  • Article
  • Open Access
1 Citations
2,829 Views
14 Pages

High Chromosomal Reorganization and Presence of Microchromosomes in Chactidae Scorpions from the Brazilian Amazon

  • Bruno Almeida,
  • Stella Malcher,
  • Marlyson Costa,
  • Jonas Martins,
  • Rudi Procópio,
  • Renata Noronha,
  • Cleusa Nagamachi and
  • Julio Pieczarka

7 April 2023

Scorpions are of particular interest in cytogenomic studies, as they can present a high incidence of chromosomal rearrangements heterozygous in natural populations. In this study, we cytogenetically analyzed four species of Chactidae. In Brotheas, 2n...

  • Communication
  • Open Access
4 Citations
3,658 Views
10 Pages

Cytotaxonomy and Molecular Analyses of Mycteria americana (Ciconiidae: Ciconiiformes): Insights on Stork Phylogeny

  • Rodrigo Petry Corrêa de Sousa,
  • Paula Sabrina Bronze Campos,
  • Michelly da Silva dos Santos,
  • Patricia Caroline O’Brien,
  • Malcolm Andrew Ferguson-Smith and
  • Edivaldo Herculano Corrêa de Oliveira

28 March 2023

Although molecular information for the wood stork (Mycteria americana) has been well described, data concerning their karyotypical organization and phylogenetic relationships with other storks are still scarce. Thus, we aimed to analyze the chromosom...

  • Article
  • Open Access
2 Citations
1,841 Views
11 Pages

The First Identification of Homomorphic XY Sex Chromosomes by Integrating Cytogenetic and Transcriptomic Approaches in Plestiodon elegans (Scincidae)

  • Wannan Xu,
  • Taiyue Li,
  • Jiahui Li,
  • Siqi Liu,
  • Xing Yu,
  • Min Tang,
  • Jingxiu Dong,
  • Jianjun Liu,
  • Xingjiang Bu and
  • Liuwang Nie
  • + 2 authors

23 May 2024

The sex chromosomes of skinks are usually poorly differentiated and hardly distinguished by cytogenetic methods. Therefore, identifying sex chromosomes in species lacking easily recognizable heteromorphic sex chromosomes is necessary to fully underst...

  • Article
  • Open Access
23 Citations
4,824 Views
16 Pages

Interspecies Chromosome Mapping in Caprimulgiformes, Piciformes, Suliformes, and Trogoniformes (Aves): Cytogenomic Insight into Microchromosome Organization and Karyotype Evolution in Birds

  • Rafael Kretschmer,
  • Marcelo Santos de Souza,
  • Ivanete de Oliveira Furo,
  • Michael N. Romanov,
  • Ricardo José Gunski,
  • Analía del Valle Garnero,
  • Thales Renato Ochotorena de Freitas,
  • Edivaldo Herculano Corrêa de Oliveira,
  • Rebecca E. O’Connor and
  • Darren K. Griffin

7 April 2021

Interchromosomal rearrangements involving microchromosomes are rare events in birds. To date, they have been found mostly in Psittaciformes, Falconiformes, and Cuculiformes, although only a few orders have been analyzed. Hence, cytogenomic studies fo...

  • Article
  • Open Access
13 Citations
4,809 Views
9 Pages

25 June 2020

Turtles, a speciose group consisting of more than 300 species, demonstrate karyotypes with diploid chromosome numbers ranging from 2n = 26 to 2n = 68. However, cytogenetic analyses have been conducted only to 1/3rd of the turtle species, often limite...

  • Article
  • Open Access
2 Citations
3,353 Views
13 Pages

Identification of Iguania Ancestral Syntenic Blocks and Putative Sex Chromosomes in the Veiled Chameleon (Chamaeleo calyptratus, Chamaeleonidae, Iguania)

  • Katerina V. Tishakova,
  • Dmitry Yu. Prokopov,
  • Guzel I. Davletshina,
  • Alexander V. Rumyantsev,
  • Patricia C. M. O’Brien,
  • Malcolm A. Ferguson-Smith,
  • Massimo Giovannotti,
  • Artem P. Lisachov and
  • Vladimir A. Trifonov

13 December 2022

The veiled chameleon (Chamaeleo calyptratus) is a typical member of the family Chamaeleonidae and a promising object for comparative cytogenetics and genomics. The karyotype of C. calyptratus differs from the putative ancestral chameleon karyotype (2...

  • Communication
  • Open Access
3 Citations
2,790 Views
9 Pages

Highly Conserved Microchromosomal Organization in Passeriformes Birds Revealed via BAC-FISH Analysis

  • Marcelo Santos de Souza,
  • Suziane Alves Barcellos,
  • Victoria Tura,
  • Vera Lúcia Bobrowski,
  • Analía Del Valle Garnero,
  • Ricardo José Gunski,
  • Darren K. Griffin and
  • Rafael Kretschmer

16 June 2023

Passeriformes birds are widely recognized for their remarkable diversity, with over 5700 species described so far. Like most bird species, they possess a karyotype characteristic of modern birds, which includes a bimodal karyotype consisting of a few...

  • Article
  • Open Access
8 Citations
5,584 Views
12 Pages

Cross-Species BAC Mapping Highlights Conservation of Chromosome Synteny across Dragon Lizards (Squamata: Agamidae)

  • Shayer Mahmood Ibney Alam,
  • Marie Altmanová,
  • Tulyawat Prasongmaneerut,
  • Arthur Georges,
  • Stephen D. Sarre,
  • Stuart V. Nielsen,
  • Tony Gamble,
  • Kornsorn Srikulnath,
  • Michail Rovatsos and
  • Tariq Ezaz
  • + 1 author

25 June 2020

Dragon lizards (Squamata: Agamidae) comprise about 520 species in six subfamilies distributed across Asia, Australasia and Africa. Only five species are known to have sex chromosomes. All of them possess ZZ/ZW sex chromosomes, which are microchromoso...

  • Article
  • Open Access
1,807 Views
13 Pages

Evolutionary Inferences on the Chromosomal Diversity of Anseriformes (Neognathae; Galloanseres) by Microsatellite Mapping

  • Paula Sabrina Bronze Campos,
  • Benilson Silva Rodrigues,
  • Anderson José Baia Gomes,
  • Rodrigo Petry Corrêa de Sousa and
  • Edivaldo Herculano Corrêa de Oliveira

15 April 2025

Anseriformes represent a basal order in the phylogeny of neognath birds and are of particular interest in cytogenetic research due to their distinctive chromosomal features. However, aspects of their chromosomal evolution, such as the distribution an...

  • Review
  • Open Access
2 Citations
2,026 Views
26 Pages

Avian Cytogenomics: Small Chromosomes, Long Evolutionary History

  • Darren K. Griffin,
  • Rafael Kretschmer,
  • Denis M. Larkin,
  • Kornsorn Srikulnath,
  • Worapong Singchat,
  • Valeriy G. Narushin,
  • Rebecca E. O’Connor and
  • Michael N. Romanov

25 August 2025

This review considers fundamental issues related to the genomics of birds (Aves), including the special organization and evolution of their chromosomes. In particular, we address the capabilities of molecular genetic/genomic approaches to clarify asp...

  • Article
  • Open Access
34 Citations
5,695 Views
31 Pages

Unveiling Comparative Genomic Trajectories of Selection and Key Candidate Genes in Egg-Type Russian White and Meat-Type White Cornish Chickens

  • Alexandra S. Abdelmanova,
  • Arsen V. Dotsev,
  • Michael N. Romanov,
  • Olga I. Stanishevskaya,
  • Elena A. Gladyr,
  • Andrey N. Rodionov,
  • Anastasia N. Vetokh,
  • Natalia A. Volkova,
  • Elena S. Fedorova and
  • Natalia A. Zinovieva
  • + 3 authors

6 September 2021

Comparison of genomic footprints in chicken breeds with different selection history is a powerful tool in elucidating genomic regions that have been targeted by recent and more ancient selection. In the present work, we aimed at examining and compari...