Climate change and injudicious nitrogen addition alter the soil physico-chemical properties and microbial activity in oligotrophic forest soil, which disrupts the nitrogen cycle balance. Nevertheless, recommended fertilizer forms and levels are considered to be crucial for stable nitrogen application. We established a short-term field trial for the first time using a randomized complete block design under the yellow larch forest, with six treatments applied, including urea CO(NH
2)
2, ammonium chloride NH
4Cl, and sodium nitrate NaNO
3 at concentrations of 10 and 20 kg N hm
−2 yr
−1, each extended by three replicates. The gene abundances were measured using quantitative PCR (qPCR), in which the abundance levels of AOA (
amoA) and
nirS were higher under high CO(NH
2)
2 2.87 × 10
10 copies g
−1 dry soil and low NO
3− 8.82 × 10
9 copies g
−1 dry soil, compared to CK, representing 2.8-fold and 1.5-fold increases, respectively. We found niche partitioning as revealed despite AOA (
amoA) increasing in number, AOB (
amoA) contributing more to ammonia oxidation while
nirS proved opportunistic under stress conditions. This was supported by distinct significant correlations among factors, in which soil urease enzymatic activity (S-UE) was associated with AOA (
amoA) and
nirK, while AOB (
amoA) and
nirS positively correlated with NH
4+ content and soil potential of hydrogen (pH), respectively. Among the applied treatments, high-level NO
3− increased total nitrogen content and had a significant effect on soil N-acetyl-β-
d-glucosaminidase (S-NAG) and soil acid protease (S-ACPT) activity. In summary, we observed an increase in
Larix olgensis growth with high nitrogen retention.
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