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17 Results Found

  • Article
  • Open Access
1 Citations
566 Views
23 Pages

19 January 2026

Background/Objectives: In 2023, we reported that the tamarins (genus Saguinus) Saguinus imperator and Saguinus midas have had an extensive independent expansion of Platy-1 SINEs compared to previously characterized platyrrhine genomes among tradition...

(This article belongs to the Section Animal Genetics and Genomics)
  • Article
  • Open Access
6 Citations
2,754 Views
14 Pages

Framework of the Alu Subfamily Evolution in the Platyrrhine Three-Family Clade of Cebidae, Callithrichidae, and Aotidae

  • Jessica M. Storer,
  • Jerilyn A. Walker,
  • Jasmine N. Baker,
  • Shifat Hossain,
  • Christian Roos,
  • Travis J. Wheeler and
  • Mark A. Batzer

18 January 2023

The history of Alu retroposons has been choreographed by the systematic accumulation of inherited diagnostic nucleotide substitutions to form discrete subfamilies, each having a distinct nucleotide consensus sequence. The oldest subfamily, AluJ, gave...

(This article belongs to the Section Population and Evolutionary Genetics and Genomics)
  • Article
  • Open Access
2 Citations
1,810 Views
12 Pages

Extensive Independent Amplification of Platy-1 Retroposons in Tamarins, Genus Saguinus

  • Jessica M. Storer,
  • Jerilyn A. Walker,
  • Thomas O. Beckstrom and
  • Mark A. Batzer

13 July 2023

Platy-1 retroposons are short interspersed elements (SINEs) unique to platyrrhine primates. Discovered in the common marmoset (Callithrix jacchus) genome in 2016, these 100 bp mobile element insertions (MEIs) appeared to be novel drivers of platyrrhi...

(This article belongs to the Special Issue Mobile-Element-Related Genetic Variation)
  • Article
  • Open Access
2 Citations
2,471 Views
13 Pages

Cebidae Alu Element Alignments and a Complex Non-Human Primate Radiation

  • Jessica M. Storer,
  • Jerilyn A. Walker,
  • Morgan A. Brown and
  • Mark A. Batzer

20 October 2022

Phylogenetic relationships among Cebidae species of platyrrhine primates are presently under debate. Studies prior to whole genome sequence (WGS) availability utilizing unidirectional Alu repeats linked Callithrix and Saguinus as sister taxa, based o...

(This article belongs to the Special Issue Genomic Impact of Transposable Elements)
  • Article
  • Open Access
5 Citations
5,123 Views
13 Pages

Recently Integrated Alu Elements in Capuchin Monkeys: A Resource for Cebus/Sapajus Genomics

  • Jessica M. Storer,
  • Jerilyn A. Walker,
  • Catherine E. Rockwell,
  • Grayce Mores,
  • Thomas O. Beckstrom,
  • Joseph D. Orkin,
  • Amanda D. Melin,
  • Kimberley A. Phillips,
  • Christian Roos and
  • Mark A. Batzer

24 March 2022

Capuchins are platyrrhines (monkeys found in the Americas) within the Cebidae family. For most of their taxonomic history, the two main morphological types of capuchins, gracile (untufted) and robust (tufted), were assigned to a single genus, Cebus....

(This article belongs to the Special Issue Mobile Elements in Phylogenomic Reconstructions)
  • Article
  • Open Access
7 Citations
3,208 Views
11 Pages

30 August 2021

Tamarins are a distinct group of small sized New World monkeys with complex phylogenetic relationships and poorly studied cytogenetic traits. In this study, we applied molecular cytogenetic analyses by fluorescence in situ hybridization with probes s...

(This article belongs to the Section Genetics and Genomics)
  • Article
  • Open Access
8 Citations
4,483 Views
16 Pages

Whole Genome Analysis of SNV and Indel Polymorphism in Common Marmosets (Callithrix jacchus)

  • R. Alan Harris,
  • Muthuswamy Raveendran,
  • Wes Warren,
  • Hillier W. LaDeana,
  • Chad Tomlinson,
  • Tina Graves-Lindsay,
  • Richard E. Green,
  • Jenna K. Schmidt,
  • Julia C. Colwell and
  • Jeffrey Rogers
  • + 7 authors

7 December 2023

The common marmoset (Callithrix jacchus) is one of the most widely used nonhuman primate models of human disease. Owing to limitations in sequencing technology, early genome assemblies of this species using short-read sequencing suffered from gaps. I...

(This article belongs to the Special Issue Primate Phylogeny and Genetics)
  • Communication
  • Open Access
1 Citations
3,930 Views
11 Pages

Gene Content and Coding Diversity of the Growth Hormone Loci of Apes

  • Rafael González-Álvarez,
  • Irám Pablo Rodríguez-Sánchez and
  • Hugo A. Barrera-Saldaña

17 January 2023

The growth hormone (GH) locus has experienced a dramatic evolution in primates, becoming multigenic and diverse in anthropoids. Despite sequence information from a vast number of primate species, it has remained unclear how the multigene family was f...

(This article belongs to the Section Molecular Genetics and Genomics)
  • Review
  • Open Access
7 Citations
5,770 Views
23 Pages

Plant Diversity in the Diet of Costa Rican Primates in Contrasting Habitats: A Meta-Analysis

  • Óscar M. Chaves,
  • Vanessa Morales-Cerdas,
  • Jazmín Calderón-Quirós,
  • Inés Azofeifa-Rojas,
  • Pablo Riba-Hernández,
  • Daniela Solano-Rojas,
  • Catalina Chaves-Cordero,
  • Eduardo Chacón-Madrigal and
  • Amanda D. Melin

28 April 2023

In human-modified tropical landscapes, the survival of arboreal vertebrates, particularly primates, depends on their plant dietary diversity. Here, we assess the diversity of plants included in the diet of Costa Rican non-human primates, CR-NHP (i.e....

(This article belongs to the Section Biodiversity Conservation)
  • Systematic Review
  • Open Access
17 Citations
6,077 Views
19 Pages

Parasites of Free-Ranging and Captive American Primates: A Systematic Review

  • Silvia Rondón,
  • Serena Cavallero,
  • Erika Renzi,
  • Andrés Link,
  • Camila González and
  • Stefano D’Amelio

The diversity, spread, and evolution of parasites in non-human primates (NHPs) is a relevant issue for human public health as well as for NHPs conservation. Although previous reviews have recorded information on parasites in NHPs (Platyrrhines) in th...

(This article belongs to the Special Issue Molecular Epidemiology and Diagnosis of Parasitic Zoonosis)
  • Case Report
  • Open Access
1 Citations
2,180 Views
7 Pages

Taenia martis Cysticercosis in a Common Marmoset (Callithrix jacchus)

  • Martina Bleyer,
  • Lena Erffmeier,
  • Olga Batura and
  • Christian Roos

4 December 2024

Taenia martis cysticercosis is a rare but recently more frequently reported disease that can affect both human and non-human primates as aberrant hosts. A common marmoset was noticed as being affected by advancing weight loss that did not respond to...

(This article belongs to the Section Anatomy, Histology and Pathology)
  • Article
  • Open Access
2,536 Views
20 Pages

Ecological Trait Differences Are Associated with Gene Expression in the Primary Visual Cortex of Primates

  • Trisha M. Zintel,
  • John J. Ely,
  • Mary Ann Raghanti,
  • William D. Hopkins,
  • Patrick R. Hof,
  • Chet C. Sherwood,
  • Jason M. Kamilar,
  • Amy L. Bauernfeind and
  • Courtney C. Babbitt

22 January 2025

Primate species differ drastically from most other mammals in how they visually perceive their environments, which is particularly important for foraging, predator avoidance, and detection of social cues. Background/Objectives: Although it is well es...

(This article belongs to the Section Population and Evolutionary Genetics and Genomics)
  • Feature Paper
  • Review
  • Open Access
3 Citations
3,569 Views
22 Pages

30 June 2023

Unlike in human research, infants are poorly represented in the literature on nonhuman primate laterality. Studies have traditionally measured adults, a trend captured by prior reviews. The extent of the knowledge gaps related to laterality measured...

(This article belongs to the Special Issue Early Laterality in Behaviour and Brain)
  • Article
  • Open Access
12 Citations
5,788 Views
21 Pages

Evolution of the Human Chromosome 13 Synteny: Evolutionary Rearrangements, Plasticity, Human Disease Genes and Cancer Breakpoints

  • Rita Scardino,
  • Vanessa Milioto,
  • Anastasia A. Proskuryakova,
  • Natalia A. Serdyukova,
  • Polina L. Perelman and
  • Francesca Dumas

1 April 2020

The history of each human chromosome can be studied through comparative cytogenetic approaches in mammals which permit the identification of human chromosomal homologies and rearrangements between species. Comparative banding, chromosome painting, Ba...

(This article belongs to the Special Issue A Tale of Genes and Genomes)
  • Article
  • Open Access
7 Citations
2,917 Views
14 Pages

Mapping Retrotransposon LINE-1 Sequences into Two Cebidae Species and Homo sapiens Genomes and a Short Review on Primates

  • Vanessa Milioto,
  • Polina L. Perelman,
  • Laura La Paglia,
  • Larisa Biltueva,
  • Melody Roelke and
  • Francesca Dumas

27 September 2022

This work focuses on the distribution of LINE-1 (a Long Interspersed Nuclear Element) in primates and its role during evolution and as a constituent of the architecture of primate genomes. To pinpoint the LINE-1 repeat distribution and its role among...

(This article belongs to the Special Issue Chromosome Evolution and Karyotype Analysis)
  • Article
  • Open Access
3 Citations
3,720 Views
15 Pages

Owl Monkey Alu Insertion Polymorphisms and Aotus Phylogenetics

  • Jessica M. Storer,
  • Jerilyn A. Walker,
  • Lydia C. Rewerts,
  • Morgan A. Brown,
  • Thomas O. Beckstrom,
  • Scott W. Herke,
  • Christian Roos and
  • Mark A. Batzer

8 November 2022

Owl monkeys (genus Aotus), or “night monkeys” are platyrrhine primates in the Aotidae family. Early taxonomy only recognized one species, Aotus trivirgatus, until 1983, when Hershkovitz proposed nine unique species designations, classifie...

(This article belongs to the Special Issue Primate Phylogeny and Genetics)
  • Article
  • Open Access
4 Citations
2,853 Views
11 Pages

13 September 2024

Background/Objectives: Nasal morphology is a significant aspect of facial anatomy and is often used for forensic identification and aesthetic surgery. This study aims to compare nasal dimensions based on sex, facial index (FI), and nasal index (NI) u...

(This article belongs to the Special Issue Innovations in Forensic Medicine)