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16 Results Found

  • Feature Paper
  • Article
  • Open Access

New Genetic Evidence for the Lateglacial History of the Scots Pine (Pinus sylvestris L.) in Southern Lithuania: The Pamerkiai Case

  • Jurata Buchovska,
  • Darius Danusevičius,
  • Linas Daugnora,
  • Algirdas Girininkas and ,
  • Gediminas Motuza,
  • Rūtilė Pukienė,
  • Žana Skuratovič and
  • Miglė Stančikaitė
  • + 3 authors+ 0 author

11 November 2026

This paper presents new ancient DNA (aDNA) results from a Scots pine (Pinus sylvestris L.) megafossil dated to the earliest intervals of the Lateglacial Interstadial (13,786–13,500 cal yr BP (calibrated years before present)). The investigated...

(This article belongs to the Section Genetics and Molecular Biology)
  • Article
  • Open Access
13 Citations
8,378 Views
29 Pages

A Case Study for the Recovery of Authentic Microbial Ancient DNA from Soil Samples

  • Vilma Pérez,
  • Yichen Liu,
  • Martha B. Hengst and
  • Laura S. Weyrich

High Throughput DNA Sequencing (HTS) revolutionized the field of paleomicrobiology, leading to an explosive growth of microbial ancient DNA (aDNA) studies, especially from environmental samples. However, aDNA studies that examine environmental microb...

(This article belongs to the Section Environmental Microbiology)
  • Article
  • Open Access
1,629 Views
11 Pages

Comparison of Illumina NovaSeq 6000, GeneMind SURFSeq 5000, Salus Evo, and MGI DNBSEQ-G400 for Ancient DNA Whole-Genome Sequencing

  • Andrey D. Manakhov,
  • Elizaveta V. Rozhdestvenskikh,
  • Eleonora D. Aituganova,
  • Aleksej N. Voroshilov and ,
  • Natalia G. Svirkina,
  • Svetlana S. Kunizheva,
  • Tatiana V. Andreeva,
  • Sergey N. Ostapenko,
  • Vladimir D. Kuznetsov and
  • Evgeny I. Rogaev
  • + 5 authors+ 0 author

24 July 2026

Background: Ancient DNA (aDNA) research is one of the biological fields that has been transformed by the development of next-generation sequencing (NGS). To date, Illumina sequencing has dominated aDNA research. However, its high costs are driving th...

(This article belongs to the Section Molecular Genetics and Genomics)
  • Article
  • Open Access
1 Citations
3,170 Views
17 Pages

When Bones Blur the Lines: Ancient DNA Validation of Morphological Sex Estimation Traits and the Challenges of Population-Specific Dimorphism

  • Francisca Alves-Cardoso,
  • Cláudia Gomes,
  • Sara Palomo-Díez,
  • César López-Matayoshi and ,
  • Steffi Vassallo,
  • Anne Malcherek,
  • Zélia Rodrigues,
  • Sandra Assis and
  • Nicholas Márquez-Grant
  • + 4 authors+ 0 author

23 June 2026

Background/Objectives: Sex estimation is a cornerstone of research and practice in bioarchaeology and forensic anthropology. However, morphological and metric methods are often hampered by population-specific variation, subjectivity in assessment, an...

(This article belongs to the Special Issue Emerging Topics in Population Genetics and Molecular Anthropology)
  • Article
  • Open Access
17 Citations
12,891 Views
18 Pages

Ancient Ancestry Informative Markers for Identifying Fine-Scale Ancient Population Structure in Eurasians

  • Umberto Esposito,
  • Ranajit Das,
  • Syakir Syed,
  • Mehdi Pirooznia and
  • Eran Elhaik

12 December 2018

The rapid accumulation of ancient human genomes from various areas and time periods potentially enables the expansion of studies of biodiversity, biogeography, forensics, population history, and epidemiology into past populations. However, most ancie...

(This article belongs to the Special Issue Tools for Population and Evolutionary Genetics)
  • Article
  • Open Access
4 Citations
4,588 Views
13 Pages

Analysis of Selective Pressure on Ancient Human Mitochondrial Genomes Reveals the Presence of Widespread Sequencing Artefacts

  • Pedro Fernandes,
  • Bernardo Pinho,
  • Bárbara Miguéis,
  • João B. Almeida and ,
  • Teresa Rito and
  • Pedro Soares
  • + 1 author+ 0 author

11 August 2025

Human mitochondrial DNA (mtDNA) is a relevant marker in evolutionary and population genetics, including ancient DNA (aDNA) research, due to inherent characteristics. However, aDNA is prone to damage and sequencing artefacts, potentially confounding e...

(This article belongs to the Section Molecular Biology)
  • Article
  • Open Access
6,547 Views
37 Pages

Diet, DNA, and the Mesolithic–Neolithic Transition in Western Scotland

  • Catriona Pickard,
  • Elizabeth Greenberg,
  • Emma Smith,
  • Andy Barlow and
  • Clive Bonsall

17 March 2025

In this paper, we revisit the Mesolithic–Neolithic transition in western Scotland and the links between early European farmers and middens in light of new aDNA, radiocarbon, and stable isotopic evidence. New carbon and nitrogen stable isotopic...

  • Article
  • Open Access
2 Citations
5,236 Views
20 Pages

Retrieving high-quality endogenous ancient DNA (aDNA) poses several challenges, including low molecular copy number, high rates of fragmentation, damage at read termini, and potential presence of exogenous contaminant DNA. All these factors complicat...

(This article belongs to the Special Issue Mitochondrial DNA and RNA)
  • Article
  • Open Access
61 Citations
9,016 Views
17 Pages

21 September 2017

The analysis of mitochondrial DNA (mtDNA) has proven useful in forensic genetics and ancient DNA (aDNA) studies, where specimens are often highly compromised and DNA quality and quantity are low. In forensic genetics, the mtDNA control region (CR) is...

(This article belongs to the Special Issue Novel and Neglected Areas of Ancient DNA Research)
  • Article
  • Open Access
23 Citations
5,312 Views
21 Pages

Raman Research on Bleomycin-Induced DNA Strand Breaks and Repair Processes in Living Cells

  • Michał Czaja,
  • Katarzyna Skirlińska-Nosek,
  • Olga Adamczyk,
  • Kamila Sofińska and ,
  • Natalia Wilkosz,
  • Zenon Rajfur,
  • Marek Szymoński and
  • Ewelina Lipiec
  • + 3 authors+ 0 author

Even several thousands of DNA lesions are induced in one cell within one day. DNA damage may lead to mutations, formation of chromosomal aberrations, or cellular death. A particularly cytotoxic type of DNA damage is single- and double-strand breaks (...

(This article belongs to the Special Issue Raman Spectroscopy for Chemical and Structural Characterization in Biology)
  • Article
  • Open Access
11 Citations
3,427 Views
14 Pages

Evaluation of the Cytotoxic Effect of Pd2Spm against Prostate Cancer through Vibrational Microspectroscopies

  • Raquel C. Laginha,
  • Clara B. Martins,
  • Ana L. C. Brandão,
  • Joana Marques and ,
  • M. Paula M. Marques,
  • Luís A. E. Batista de Carvalho,
  • Inês P. Santos and
  • Ana L. M. Batista de Carvalho
  • + 3 authors+ 0 author

18 January 2023

Regarding the development of new antineoplastic agents, with a view to assess the selective antitumoral potential which aims at causing irreversible damage to cancer cells while preserving the integrity of their healthy counterparts, it is essential...

(This article belongs to the Section Macromolecules)
  • Article
  • Open Access
1 Citations
3,045 Views
18 Pages

Archaeozoology Supports a Holistic View on Fish Assessments in Large Rivers—A Case Study from the Volga River: From Quantitative Data and Ancient DNA to Biodiversity Analysis

  • Igor V. Askeyev,
  • Oleg V. Askeyev,
  • Arthur O. Askeyev,
  • Dilyara N. Shaymuratova and ,
  • Sergey P. Monakhov,
  • Maria A. Pobedintseva,
  • Vladimir A. Trifonov,
  • Konrad Górski and
  • Martin Schletterer
  • + 4 authors+ 0 author

12 April 2024

Knowledge of the historical and present dynamics of populations of migratory fish can promote our understanding of factors affecting their recruitment and abundance. Taxonomic identification of 23,802 bone remains and 13,539 scales of fish from 30 ar...

(This article belongs to the Section Biodiversity and Functionality of Aquatic Ecosystems)
  • Article
  • Open Access
23 Citations
5,978 Views
21 Pages

Fungi are ecologically important in several ecosystem processes, yet their community composition, ecophysiological roles, and responses to changing environmental factors in historical sediments are rarely studied. Here we explored ancient fungal DNA...

(This article belongs to the Special Issue Understanding Ancient Microbiomes)
  • Article
  • Open Access
9 Citations
4,309 Views
17 Pages

6 July 2022

Circulating tumor cells (CTCs) crosstalk with different blood cells before a few of them settle down as disseminated tumor cells (DTCs). We evaluated the correlation between CTC subtypes, DTCs and the neutrophil to lymphocyte ratio (NLR), platelet to...

(This article belongs to the Special Issue Promising Biomarkers in Liquid Biopsy of Cancer)
  • Article
  • Open Access
148 Views
10 Pages

Perioperative Dynamics of Tumor Cells into the Circulatory System During Vertebral Cement Augmentation in Metastatic Spinal Disease—A Prospective Pilot Study

  • Moritz C. Deml,
  • Samuel F. Schaible,
  • Carlo R. Largiadèr,
  • Dominic Schärer and ,
  • Lorin M. Benneker and
  • Helena Mengolian
  • + 1 author+ 0 author

28 October 2026

Background/Objectives: Vertebroplasty (VP) and balloon kyphoplasty (KP) are well-established surgical interventions used to stabilize pathological fractures and severe spinal instability resulting from osteolytic spinal metastases. Both procedures in...

(This article belongs to the Special Issue Clinical Advances in Diagnosis and Treatment of Metastatic Spinal Tumor)
  • Article
  • Open Access
25 Citations
8,378 Views
14 Pages

Cell-Free DNA Variant Sequencing Using CTC-Depleted Blood for Comprehensive Liquid Biopsy Testing in Metastatic Breast Cancer

  • Corinna Keup,
  • Markus Storbeck,
  • Siegfried Hauch,
  • Peter Hahn and ,
  • Markus Sprenger-Haussels,
  • Mitra Tewes,
  • Pawel Mach,
  • Oliver Hoffmann,
  • Rainer Kimmig and
  • Sabine Kasimir-Bauer
  • + 5 authors+ 0 author

18 February 2019

Liquid biopsy analytes such as cell-free DNA (cfDNA) and circulating tumor cells (CTCs) exhibit great potential for personalized treatment. Since cfDNA and CTCs are considered to give additive information and blood specimens are limited, isolation of...

(This article belongs to the Special Issue Treatment Strategies and Survival Outcomes in Breast Cancer)