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27 Results Found

  • Article
  • Open Access
988 Views
11 Pages

17 February 2025

Background: Radiomics has become a valuable tool in medical imaging, but its clinical use is limited by data variability and a lack of reproducibility between centers. This study aims to assess the differences between two scanners and provide guidanc...

  • Article
  • Open Access
17 Citations
3,391 Views
13 Pages

Prediction of Human Papillomavirus (HPV) Association of Oropharyngeal Cancer (OPC) Using Radiomics: The Impact of the Variation of CT Scanner

  • Reza Reiazi,
  • Colin Arrowsmith,
  • Mattea Welch,
  • Farnoosh Abbas-Aghababazadeh,
  • Christopher Eeles,
  • Tony Tadic,
  • Andrew J. Hope,
  • Scott V. Bratman and
  • Benjamin Haibe-Kains

8 May 2021

Studies have shown that radiomic features are sensitive to the variability of imaging parameters (e.g., scanner models), and one of the major challenges in these studies lies in improving the robustness of quantitative features against the variations...

  • Article
  • Open Access
5 Citations
5,533 Views
17 Pages

The Impact of Photobleaching on Microarray Analysis

  • Marcel Von der Haar,
  • John-Alexander Preuß,
  • Kathrin Von der Haar,
  • Patrick Lindner,
  • Thomas Scheper and
  • Frank Stahl

11 September 2015

DNA-Microarrays have become a potent technology for high-throughput analysis of genetic regulation. However, the wide dynamic range of signal intensities of fluorophore-based microarrays exceeds the dynamic range of a single array scan by far, thus l...

  • Article
  • Open Access
24 Citations
6,123 Views
32 Pages

31 May 2022

Polygon Mirror (PM)-based scanning heads are one of the fastest and most versatile optomechanical laser scanners. The aim of this work is to develop a multi-parameter opto-mechanical analysis of PMs, from which to extract rules-of-thumbs for the desi...

  • Article
  • Open Access
8 Citations
4,139 Views
20 Pages

27 March 2023

A novel visual 3D reconstruction system, composed of a two-axis galvanometer scanner, a camera with a lens, and a set of control units, is introduced in this paper. By changing the mirror angles of the galvanometer scanner fixed in front of the camer...

  • Article
  • Open Access
5 Citations
2,357 Views
12 Pages

Elemental Variability in Stems of Pinus sylvestris L.: Whether a Single Core Can Represent All the Stem

  • Vladimir L. Gavrikov,
  • Alexey I. Fertikov,
  • Vladimir E. Vidus,
  • Ruslan A. Sharafutdinov and
  • Eugene A. Vaganov

15 February 2023

In dendrochemical studies, an analysis of wooden cores extracted from tree stems is a widely spread research method. A methodological problem is related to the method: whether a single core per tree can be representative of all the stems. The study a...

  • Review
  • Open Access
144 Citations
13,298 Views
30 Pages

Making Radiomics More Reproducible across Scanner and Imaging Protocol Variations: A Review of Harmonization Methods

  • Shruti Atul Mali,
  • Abdalla Ibrahim,
  • Henry C. Woodruff,
  • Vincent Andrearczyk,
  • Henning Müller,
  • Sergey Primakov,
  • Zohaib Salahuddin,
  • Avishek Chatterjee and
  • Philippe Lambin

27 August 2021

Radiomics converts medical images into mineable data via a high-throughput extraction of quantitative features used for clinical decision support. However, these radiomic features are susceptible to variation across scanners, acquisition protocols, a...

  • Article
  • Open Access
13 Citations
1,201 Views
10 Pages

QIN DAWG Validation of Gradient Nonlinearity Bias Correction Workflow for Quantitative Diffusion-Weighted Imaging in Multicenter Trials

  • Dariya I. Malyarenko,
  • Lisa J. Wilmes,
  • Lori R. Arlinghaus,
  • Michael A. Jacobs,
  • Wei Huang,
  • Karl G. Helmer,
  • Bachir Taouli,
  • Thomas E. Yankeelov,
  • David Newitt and
  • Thomas L. Chenevert

1 December 2016

Previous research has shown that system-dependent gradient nonlinearity (GNL) introduces a significant spatial bias (nonuniformity) in apparent diffusion coefficient (ADC) maps. Here, the feasibility of centralized retrospective system-specific corre...

  • Article
  • Open Access
53 Citations
8,091 Views
33 Pages

A Kernel-Driven BRDF Approach to Correct Airborne Hyperspectral Imagery over Forested Areas with Rugged Topography

  • Wen Jia,
  • Yong Pang,
  • Riccardo Tortini,
  • Daniel Schläpfer,
  • Zengyuan Li and
  • Jean-Louis Roujean

29 January 2020

Airborne hyper-spectral imaging has been proven to be an efficient means to provide new insights for the retrieval of biophysical variables. However, quantitative estimates of unbiased information derived from airborne hyperspectral measurements prim...

  • Article
  • Open Access
10 Citations
5,067 Views
15 Pages

Sensitivity of C-Band SAR Polarimetric Variables to the Directionality of Surface Roughness Parameters

  • Zohreh Alijani,
  • John Lindsay,
  • Melanie Chabot,
  • Tracy Rowlandson and
  • Aaron Berg

5 June 2021

Surface roughness is an important factor in many soil moisture retrieval models. Therefore, any mischaracterization of surface roughness parameters (root mean square height, RMSH, and correlation length, ʅ) may result in unreliable predictions and so...

  • Article
  • Open Access
1,488 Views
29 Pages

Structure-Preserving Histopathological Stain Normalization via Attention-Guided Residual Learning

  • Nuwan Madusanka,
  • Prathiksha Padmanabha,
  • Kasunika Guruge and
  • Byeong-il Lee

Staining variability in histopathological images compromises automated diagnostic systems by affecting the reliability of computational pathology algorithms. Existing normalization methods prioritize color consistency but often sacrifice critical mor...

  • Article
  • Open Access
951 Views
16 Pages

Variability of Metabolic Rate and Distribution Volume Quantification in Whole-Body Parametric PATLAK [18F]-FDG PET/CT—A Prospective Trial in Patients with Lung Cancer

  • Stephan Ursprung,
  • Lars Zender,
  • Patrick Ghibes,
  • Florian Hagen,
  • Konstantin Nikolaou,
  • Christian la Fougère and
  • Matthias Weissinger

Background: The recent introduction of whole-body positron emission tomography/ computed tomography (PET/CT) scanners and multi-bed, multi-time point acquisition technique enable calculating fluorodeoxyglucose (FDG) kinetics in the whole body. Howeve...

  • Article
  • Open Access
70 Citations
9,781 Views
26 Pages

Mapping Canopy Height and Growing Stock Volume Using Airborne Lidar, ALOS PALSAR and Landsat ETM+

  • Oliver Cartus,
  • Josef Kellndorfer,
  • Markus Rombach and
  • Wayne Walker

26 October 2012

We have investigated for forest plantations in Chile the stand-level retrieval of canopy height (CH) and growing stock volume (GSV) using Airborne Laser Scanner (ALS), ALOS PALSAR and Landsat. In a two-stage up-scaling approach, ensemble regression t...

  • Article
  • Open Access
1 Citations
1,656 Views
14 Pages

Regional Algorithm of Quantitative Assessment of Cyanobacteria Blooms in the Eastern Part of the Gulf of Finland Using Satellite Ocean Color Data

  • Svetlana Vazyulya,
  • Oleg Kopelevich,
  • Inna Sahling,
  • Ekaterina Kochetkova,
  • Evgenia Lange,
  • Alexander Khrapko,
  • Tatyana Eremina and
  • Dmitry Glukhovets

5 September 2023

Summer blooms of potentially harmful cyanobacteria are common in the Baltic Sea. Under clear sky conditions, the cyanobacterial blooms are easily detectable from space. We propose a new regional algorithm for cyanobacteria biomass estimation from sat...

  • Article
  • Open Access
21 Citations
10,407 Views
19 Pages

Linking Terrestrial LiDAR Scanner and Conventional Forest Structure Measurements with Multi-Modal Satellite Data

  • Kalkidan Ayele Mulatu,
  • Mathieu Decuyper,
  • Benjamin Brede,
  • Lammert Kooistra,
  • Johannes Reiche,
  • Brice Mora and
  • Martin Herold

26 March 2019

Obtaining information on vertical forest structure requires detailed data acquisition and analysis which is often performed at a plot level. With the growing availability of multi-modal satellite remote sensing (SRS) datasets, their usability towards...

  • Article
  • Open Access
18 Citations
5,075 Views
30 Pages

piNET–An Automated Proliferation Index Calculator Framework for Ki67 Breast Cancer Images

  • Rokshana Stephny Geread,
  • Abishika Sivanandarajah,
  • Emily Rita Brouwer,
  • Geoffrey A. Wood,
  • Dimitrios Androutsos,
  • Hala Faragalla and
  • April Khademi

22 December 2020

In this work, a novel proliferation index (PI) calculator for Ki67 images called piNET is proposed. It is successfully tested on four datasets, from three scanners comprised of patches, tissue microarrays (TMAs) and whole slide images (WSI), represen...

  • Article
  • Open Access
6 Citations
3,232 Views
12 Pages

14 July 2022

Background: Our aim is to assess the utility and associations of quantitative bone marrow attenuation (BMA) values measured on clinical dual-energy computed tomography (DECT) exams in non-hematooncologic subjects with skeletal regions, patient age, g...

  • Article
  • Open Access
39 Citations
9,948 Views
20 Pages

Safe and Robust Mobile Robot Navigation in Uneven Indoor Environments

  • Chaoqun Wang,
  • Jiankun Wang,
  • Chenming Li,
  • Danny Ho,
  • Jiyu Cheng,
  • Tingfang Yan,
  • Lili Meng and
  • Max Q.-H. Meng

7 July 2019

Complex environments pose great challenges for autonomous mobile robot navigation. In this study, we address the problem of autonomous navigation in 3D environments with staircases and slopes. An integrated system for safe mobile robot navigation in...

  • Article
  • Open Access
24 Citations
6,019 Views
16 Pages

Estimation of Vegetative Growth in Strawberry Plants Using Mobile LiDAR Laser Scanner

  • Kowshik Kumar Saha,
  • Nikos Tsoulias,
  • Cornelia Weltzien and
  • Manuela Zude-Sasse

Monitoring of plant vegetative growth can provide the basis for precise crop management. In this study, a 2D light detection and ranging (LiDAR) laser scanner, mounted on a linear conveyor, was used to acquire multi-temporal three-dimensional (3D) da...

  • Article
  • Open Access
29 Citations
9,020 Views
19 Pages

1 February 2016

Often landscape metrics are not thoroughly evaluated with respect to remote sensing data characteristics, such as their behavior in relation to variation in spatial and temporal resolution, number of land cover classes or dominant land cover categori...

  • Review
  • Open Access
9 Citations
5,408 Views
23 Pages

Remote Sensing Grassland Productivity Attributes: A Systematic Review

  • Tsitsi Bangira,
  • Onisimo Mutanga,
  • Mbulisi Sibanda,
  • Timothy Dube and
  • Tafadzwanashe Mabhaudhi

12 April 2023

A third of the land on the Earth is composed of grasslands, mainly used for forage. Much effort is being conducted to develop tools to estimate grassland productivity (GP) at different extents, concentrating on spatial and seasonal variability pertai...

  • Article
  • Open Access
2 Citations
1,913 Views
20 Pages

Analysis of the Technical Accuracy of a Patient-Specific Stereotaxy Platform for Brain Biopsy

  • Marcel Müller,
  • Dirk Winkler,
  • Robert Möbius,
  • Michael Werner,
  • Welf-Guntram Drossel,
  • Erdem Güresir and
  • Ronny Grunert

5 February 2024

The use of stereotactic frames is a common practice in neurosurgical interventions such as brain biopsy and deep brain stimulation. However, conventional stereotactic frames have been shown to require modification and adaptation regarding patient and...

  • Article
  • Open Access
1,076 Views
22 Pages

3 February 2025

Beach surface moisture (BSM) is crucial to studying coastal aeolian sand transport processes. However, traditional measurement techniques fail to accurately monitor moisture distribution with high spatiotemporal resolution. Remote sensing technologie...

  • Article
  • Open Access
7 Citations
2,885 Views
12 Pages

Comparison of Two Contemporary Quantitative Atherosclerotic Plaque Assessment Tools for Coronary Computed Tomography Angiography: Single-Center Analysis and Multi-Center Patient Cohort Validation

  • Loris Weichsel,
  • Alexander Giesen,
  • Florian André,
  • Matthias Renker,
  • Stefan Baumann,
  • Philipp Breitbart,
  • Meinrad Beer,
  • Pal Maurovitch-Horvat,
  • Bálint Szilveszter and
  • Borbála Vattay
  • + 6 authors

Background: Coronary computed tomography angiography (CCTA) provides non-invasive quantitative assessments of plaque burden and composition. The quantitative assessment of plaque components requires the use of analysis software that provides reproduc...

  • Article
  • Open Access
345 Citations
21,035 Views
23 Pages

High Throughput Field Phenotyping of Wheat Plant Height and Growth Rate in Field Plot Trials Using UAV Based Remote Sensing

  • Fenner H. Holman,
  • Andrew B. Riche,
  • Adam Michalski,
  • March Castle,
  • Martin J. Wooster and
  • Malcolm J. Hawkesford

18 December 2016

There is a growing need to increase global crop yields, whilst minimising use of resources such as land, fertilisers and water. Agricultural researchers use ground-based observations to identify, select and develop crops with favourable genotypes and...

  • Article
  • Open Access
7 Citations
4,737 Views
14 Pages

Rate of Change of Liver Iron Content by MR Imaging Methods: A Comparison Study

  • Shyam Sunder B. Venkatakrishna,
  • Hansel J. Otero,
  • Adarsh Ghosh,
  • Dmitry Khrichenko and
  • Suraj D. Serai

8 October 2022

Objective: Magnetic resonance imaging (MRI) can accurately quantify liver iron concentration (LIC), eliminating the need for an invasive liver biopsy. Currently, the most widely used relaxometry methods for iron quantification are R2 and R2*, which a...

  • Article
  • Open Access
14 Citations
6,088 Views
10 Pages

A number of imaging readout schemes are proposed for renal arterial spin labeling (ASL) to quantify kidney cortex perfusion, including gradient echo-based methods of balanced fast field echo (bFFE) and gradient-echo echo-planar imaging (GE-EPI), or s...