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25 Results Found

  • Article
  • Open Access
34 Citations
6,108 Views
21 Pages

Drought Stress Induces Morpho-Physiological and Proteome Changes of Pandanus amaryllifolius

  • Muhammad Asyraf Mohd Amnan,
  • Wan Mohd Aizat,
  • Fiqri Dizar Khaidizar and
  • Boon Chin Tan

15 January 2022

Drought is one of the significant threats to the agricultural sector. However, there is limited knowledge on plant response to drought stress and post-drought recovery. Pandanus amaryllifolius, a moderate drought-tolerant plant, is well-known for its...

  • Article
  • Open Access
6 Citations
2,920 Views
13 Pages

Proteomic Profiling Skin Mucus of European Eel Anguilla anguilla Infected with Anguillid Herpesvirus

  • Ying-Ying Li,
  • Jin-Xian Yang,
  • Xi Chen,
  • Qiang Chen,
  • Tie-Ying Song and
  • Jun-Qing Ge

24 September 2022

Anguillid herpesvirus 1 (AngHV) is an important viral pathogen affecting eel. This study was designed to investigate the potential molecular mechanisms and immune response elicited at the protein levels in the skin mucus of AngHV-infected Anguilla an...

  • Article
  • Open Access
1 Citations
3,013 Views
12 Pages

Motif-Targeting Phosphoproteome Analysis of Cancer Cells for Profiling Kinase Inhibitors

  • Kosuke Ogata,
  • Shunsuke Takagi,
  • Naoyuki Sugiyama and
  • Yasushi Ishihama

23 December 2022

We present a motif-targeting phosphoproteome analysis workflow utilizing in vitro kinase reaction to enrich a subset of peptides with specific primary sequence motifs. Phosphopeptides are enriched and dephosphorylated with alkaline phosphatase, follo...

  • Article
  • Open Access
10 Citations
5,176 Views
15 Pages

Oxonium Ion Guided Analysis of Quantitative Proteomics Data Reveals Site-Specific O-Glycosylation of Anterior Gradient Protein 2 (AGR2)

  • Martina Pirro,
  • Yassene Mohammed,
  • Arnoud H. de Ru,
  • George M. C. Janssen,
  • Rayman T. N. Tjokrodirijo,
  • Katarina Madunić,
  • Manfred Wuhrer,
  • Peter A. van Veelen and
  • Paul J. Hensbergen

Developments in mass spectrometry (MS)-based analyses of glycoproteins have been important to study changes in glycosylation related to disease. Recently, the characteristic pattern of oxonium ions in glycopeptide fragmentation spectra had been used...

  • Article
  • Open Access
21 Citations
11,840 Views
14 Pages

Changes in Proteins in Saliva and Serum in Equine Gastric Ulcer Syndrome Using a Proteomic Approach

  • Alberto Muñoz-Prieto,
  • Maria Dolores Contreras-Aguilar,
  • Jose Joaquín Cerón,
  • Ignacio Ayala,
  • Maria Martin-Cuervo,
  • Juan Carlos Gonzalez-Sanchez,
  • Stine Jacobsen,
  • Josipa Kuleš,
  • Anđelo Beletić and
  • Ivana Rubić
  • + 3 authors

2 May 2022

Changes in the salivary proteome in 12 horses with the two diseases included in equine gastric ulcer syndrome (EGUS), equine glandular gastric disease (EGGD) (n = 6) and equine squamous gastric disease (ESGD) (n = 6), were evaluated using a high-reso...

  • Article
  • Open Access
3 Citations
2,400 Views
18 Pages

26 January 2024

Black spot needle blight is a minor disease in Mongolian Scots pine (Pinus sylvestris var. mongolica) caused by Pestalotiopsis neglecta, but it can cause economic losses in severe cases. Sodium pheophorbide a (SPA), an intermediate product of the chl...

  • Article
  • Open Access
10 Citations
4,960 Views
12 Pages

Determining Plasma Protein Variation Parameters as a Prerequisite for Biomarker Studies—A TMT-Based LC-MSMS Proteome Investigation

  • Lou-Ann C. Andersen,
  • Nicolai Bjødstrup Palstrøm,
  • Axel Diederichsen,
  • Jes Sanddal Lindholt,
  • Lars Melholt Rasmussen and
  • Hans Christian Beck

1 December 2021

Specific plasma proteins serve as valuable markers for various diseases and are in many cases routinely measured in clinical laboratories by fully automated systems. For safe diagnostics and monitoring using these markers, it is important to ensure a...

  • Article
  • Open Access
5 Citations
2,351 Views
22 Pages

Distinguishing Natural Infections of the Bovine Mammary Gland by Staphylococcus from Streptococcus spp. Using Quantitative Milk Proteomics

  • Dina Rešetar Maslov,
  • Funmilola Clara Thomas,
  • Anđelo Beletić,
  • Josipa Kuleš,
  • Ivana Rubić,
  • Miroslav Benić,
  • Goran Bačić,
  • Nino Maćešić,
  • Vida Eraghi and
  • Vladimir Farkaš
  • + 5 authors

31 May 2023

Bovine mastitis is the most frequent disease on dairy farms, which leads to a decrease in the health welfare of the animals and great economic losses. This study was aimed at determining the quantitative variations in the milk proteome caused by natu...

  • Article
  • Open Access
711 Views
28 Pages

Proteomic Analysis of Low-Temperature Stress Response in Maize (Zea mays L.) at the Seedling Stage

  • Tao Yu,
  • Jianguo Zhang,
  • Xuena Ma,
  • Shiliang Cao,
  • Wenyue Li and
  • Gengbin Yang

Low temperature severely restricts maize seedling establishment and yield in northern China, but the proteomic basis of low-temperature tolerance in maize remains unclear. This study used TMT-labeled quantitative proteomics combined with data-indepen...

  • Article
  • Open Access
682 Views
23 Pages

Cannabinoid Receptor Type 2 Agonist JWH-133 Stimulates Antiviral Factors and Decreases Proviral, Inflammatory, and Neurotoxic Proteins in HIV-Infected Macrophage Secretome

  • Lester J. Rosario-Rodríguez,
  • Yadira M. Cantres-Rosario,
  • Ana E. Rodríguez De Jesús,
  • Alana M. Mera-Pérez,
  • Eduardo L. Tosado-Rodríguez,
  • Abiel Roche Lima and
  • Loyda M. Meléndez

30 October 2025

Although antiviral therapy has improved quality of life, around 50% of people with HIV (PWH) experience neurodegeneration and cognitive decline. This is prompted in part by the migration of HIV-infected monocyte-derived macrophages (MDMs) to the brai...

  • Article
  • Open Access
14 Citations
4,978 Views
19 Pages

A quantitative proteomic analysis of the response to dry needling combined with static stretching treatment was performed in a rat model of active myofascial trigger points (MTrPs). 36 rats were divided into a model group (MG), a stretching group (SG...

  • Article
  • Open Access
22 Citations
3,555 Views
14 Pages

31 August 2020

Sphingolipids are essential biomolecules and membrane components, but their regulatory role in cotton fiber development is poorly understood. Here, we found that fumonisin B1 (FB1)—a sphingolipid synthesis inhibitor—could block fiber elon...

  • Article
  • Open Access
15 Citations
3,390 Views
20 Pages

Changes in Whey Proteome between Mediterranean and Murrah Buffalo Colostrum and Mature Milk Reflect Their Pharmaceutical and Medicinal Value

  • Mahmoud Abdel-Hamid,
  • Pan Yang,
  • Islam Mostafa,
  • Ali Osman,
  • Ehab Romeih,
  • Yongxin Yang,
  • Zizhen Huang,
  • Awad A. Awad and
  • Ling Li

27 February 2022

Milk represents an integrated meal for newborns; its whey protein is rich in many health beneficial components and proteins. The current study aimed to investigate the differences between colostrum and mature milk from Mediterranean and Murrah buffal...

  • Article
  • Open Access
2 Citations
2,356 Views
19 Pages

Plasma Proteins Associated with COVID-19 Severity in Puerto Rico

  • Lester J. Rosario-Rodríguez,
  • Yadira M. Cantres-Rosario,
  • Kelvin Carrasquillo-Carrión,
  • Alexandra Rosa-Díaz,
  • Ana E. Rodríguez-De Jesús,
  • Verónica Rivera-Nieves,
  • Eduardo L. Tosado-Rodríguez,
  • Loyda B. Méndez,
  • Abiel Roche-Lima and
  • Jorge Bertrán
  • + 1 author

Viral strains, age, and host factors are associated with variable immune responses against SARS-CoV-2 and disease severity. Puerto Ricans have a genetic mixture of races: European, African, and Native American. We hypothesized that unique host protei...

  • Review
  • Open Access
1 Citations
1,549 Views
16 Pages

Proteomic Strategies on the Management of Phytopathogenic Fungi

  • Aldrey Nathália Ribeiro Corrêa,
  • Ana Carolina Ritter and
  • Adriano Brandelli

11 April 2025

Phytopathogenic fungi are important causative agents of many plant diseases, resulting in substantial economic losses in agriculture. Proteomics has become one of the most relevant high-throughput technologies, and current advances in proteomic metho...

  • Article
  • Open Access
18 Citations
4,984 Views
16 Pages

Comparative Proteomics Analysis of Anisakis simplex s.s.—Evaluation of the Response of Invasive Larvae to Ivermectin

  • Iwona Polak,
  • Elżbieta Łopieńska-Biernat,
  • Robert Stryiński,
  • Jesús Mateos and
  • Mónica Carrera

26 June 2020

Ivermectin (IVM), an antiparasitic drug, has a positive effect against Anisakis simplex s.s. infection and has been used for the treatment and prevention of anisakiasis in humans. However, the molecular mechanism of action of IVM on A. simplex s.s. r...

  • Article
  • Open Access
11 Citations
3,417 Views
30 Pages

Comparative Proteomic Analysis Reveals Mx1 Inhibits Senecavirus A Replication in PK-15 Cells by Interacting with the Capsid Proteins VP1, VP2 and VP3

  • Hang Gao,
  • Zhaoying Xiang,
  • Xinna Ge,
  • Lei Zhou,
  • Jun Han,
  • Xin Guo,
  • Yanhong Chen,
  • Yongning Zhang and
  • Hanchun Yang

21 April 2022

As an emergent picornavirus pathogenic to pigs, Senecavirus A (SVA) can replicate in pig kidneys and proliferates well in porcine kidney epithelial PK-15 cells. Here, tandem mass tags (TMT) labeling coupled with liquid chromatography–tandem mas...

  • Article
  • Open Access
18 Citations
5,332 Views
23 Pages

Intracellular and Extracellular Markers of Lethality in Osteogenesis Imperfecta: A Quantitative Proteomic Approach

  • Luca Bini,
  • Domitille Schvartz,
  • Chiara Carnemolla,
  • Roberta Besio,
  • Nadia Garibaldi,
  • Jean-Charles Sanchez,
  • Antonella Forlino and
  • Laura Bianchi

Osteogenesis imperfecta (OI) is a heritable disorder that mainly affects the skeleton. The inheritance is mostly autosomal dominant and associated to mutations in one of the two genes, COL1A1 and COL1A2, encoding for the type I collagen α chain...

  • Article
  • Open Access
7 Citations
3,132 Views
17 Pages

This study undertakes a comprehensive exploration of the impact of slightly acidic electrolyzed water (SAEW) on Listeria monocytogenes, a common foodborne pathogen, with a particular focus on understanding the molecular mechanisms leading to the viab...

  • Article
  • Open Access
4 Citations
2,579 Views
31 Pages

17 October 2023

Prometryn is a methylthio-s-triazine herbicide used to control the growth of annual broadleaf and grass weeds in many cultivated plants. Significant traces of prometryn are documented in the environment, mainly in waters, soil, and plants used for hu...

  • Article
  • Open Access
6 Citations
2,357 Views
19 Pages

Quantitative Proteomics Reveal That CB2R Agonist JWH-133 Downregulates NF-κB Activation, Oxidative Stress, and Lysosomal Exocytosis from HIV-Infected Macrophages

  • Lester J. Rosario-Rodríguez,
  • Yadira M. Cantres-Rosario,
  • Kelvin Carrasquillo-Carrión,
  • Ana E. Rodríguez-De Jesús,
  • Luz J. Cartagena-Isern,
  • Luis A. García-Requena,
  • Abiel Roche-Lima and
  • Loyda M. Meléndez

HIV-associated neurocognitive disorders (HAND) affect 15–55% of HIV-positive patients and effective therapies are unavailable. HIV-infected monocyte-derived macrophages (MDM) invade the brain of these individuals, promoting neurotoxicity. We de...

  • Article
  • Open Access
4 Citations
2,137 Views
17 Pages

Proteomic Analysis of Rat Duodenum Reveals the Modulatory Effect of Boron Supplementation on Immune Activity

  • Chunfang Zhao,
  • Shuqin Chen,
  • Yujiao Han,
  • Feng Zhang,
  • Man Ren,
  • Qianqian Hu,
  • Pengfei Ye,
  • Xiaojin Li,
  • Erhui Jin and
  • Shenghe Li

30 July 2023

The proper supplementation of boron, an essential trace element, can enhance animal immune function. We utilized the method of TMT peptide labeling in conjunction with LC-MS/MS quantitative proteomics for the purpose of examining the effects of boric...

  • Article
  • Open Access
19 Citations
4,900 Views
20 Pages

Elongation of very long-chain fatty acids protein 6 (Elovl6) has been reported to be associated with clinical treatments of a variety of metabolic diseases. However, there is no systematic and comprehensive study to reveal the regulatory role of Elov...

  • Article
  • Open Access
5 Citations
2,455 Views
15 Pages

Proteomic Analysis of the Effect of Accelerated Ageing on Allium mongolicum Seeds

  • Xiaoqing Song,
  • Zhongren Yang,
  • Dong Zhang,
  • Xiaoyan Zhang,
  • Fenglan Zhang,
  • Jiecai Liu and
  • Chuanzong Yu

Seed propagation is the most commonly used method for producing Allium mongolicum seeds. However, as storage time increases, the seeds may suffer from ageing to varying degrees. This study aims to investigate the proteome expression of A. mongolicum...

  • Article
  • Open Access
7 Citations
2,982 Views
21 Pages

Comparative Proteomic Analysis of tPVAT during Ang II Infusion

  • Xiuying Liang,
  • Haijing Guan,
  • Jingwen Sun,
  • Yan Qi and
  • Wenjuan Yao

Perivascular adipose tissue (PVAT) homeostasis plays an important role in maintaining vascular function, and PVAT dysfunction may induce several pathophysiological situations. In this study, we investigated the effect and mechanism of the local angio...