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Biomolecules, Volume 13, Issue 6

2023 June - 142 articles

Cover Story: Extracellular vesicles (EVs) are membrane-enclosed nano-sized particles, identified as novel mediators of cell–cell communication. The present review delineates how EVs from different hematological tumors influence the cells in the tumor microenvironment, such as immune cells, stromal cells, fibroblasts and endothelial cells, as well as various extracellular matrix components, ultimately aiding in the growth and metastatic dissemination of the tumor. The advancement of EV research in the past few decades not only identifies EVs as an important contributor in drug resistance, but also highlights their impeccable use as biomarkers and therapeutics. Despite the current challenges, EVs research has shown promises in the treatment of different forms of hematological malignancies in diverse ways. View this paper
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Articles (142)

  • Article
  • Open Access
6 Citations
3,112 Views
17 Pages

Isoallopregnanolone Inhibits Estrus Cycle-Dependent Aggressive Behavior

  • Torbjörn Bäckström,
  • Sara K. S. Bengtsson,
  • Jessica Sjöstedt,
  • Evgenya Malinina,
  • Maja Johansson,
  • Gianna Ragagnin,
  • Karin Ekberg and
  • Per Lundgren

20 June 2023

Among female rats, some individuals show estrus cycle-dependent irritability/aggressive behaviors, and these individual rats may be used as a model for premenstrual dysphoric disorder (PMDD). We wanted to investigate if these behaviors are related to...

  • Review
  • Open Access
3,374 Views
19 Pages

20 June 2023

Accurate transmission of genomic information across multiple cell divisions and generations, without any losses or errors, is fundamental to all living organisms. To achieve this goal, eukaryotes devised chromosomes. Eukaryotic genomes are represente...

  • Article
  • Open Access
7 Citations
2,861 Views
13 Pages

19 June 2023

Integrin β4 (ITGB4) is a member of the integrin family, which plays a crucial role in mediating cell adhesion to the extracellular matrix. Recent studies have demonstrated that ITGB4 is involved in tumorigenesis and metastasis during the develop...

  • Article
  • Open Access
4 Citations
2,976 Views
17 Pages

Monoamine Oxidase A Contributes to Serotonin—But Not Norepinephrine-Dependent Damage of Rat Ventricular Myocytes

  • Jonas Knittel,
  • Nadja Itani,
  • Rolf Schreckenberg,
  • Jacqueline Heger,
  • Susanne Rohrbach,
  • Rainer Schulz and
  • Klaus-Dieter Schlüter

19 June 2023

Serotonin effects on cardiac hypertrophy, senescence, and failure are dependent either on activation of specific receptors or serotonin uptake and serotonin degradation by monoamine oxidases (MAOs). Receptor-dependent effects are specific for seroton...

  • Article
  • Open Access
2,084 Views
16 Pages

Oligomerization and Adjuvant Activity of Peptides Derived from the VirB4-like ATPase of Clostridioides difficile

  • Julya Sorokina,
  • Irina Sokolova,
  • Mariya Majorina,
  • Anastasia Ungur,
  • Vasiliy Troitskiy,
  • Amir Tukhvatulin,
  • Bogdan Melnik and
  • Yury Belyi

18 June 2023

In a previous study, we demonstrated that the Clostridioides difficile VirB4-like ATPase forms oligomers in vitro. In the current investigation, to study the observed phenomenon in more detail, we prepared a library of VirB4-derived peptides (delVirB...

  • Article
  • Open Access
42 Citations
3,747 Views
18 Pages

18 June 2023

In this nano era, nanomaterials and nanostructures are popular in developing novel functional materials. However, the combinations of materials at micro and macro scales can open new routes for developing novel trans-scale products with improved or e...

  • Article
  • Open Access
8 Citations
4,459 Views
15 Pages

Three-Dimensional Histological Characterization of the Placental Vasculature Using Light Sheet Microscopy

  • Lennart Freise,
  • Rose Yinghan Behncke,
  • Hanna Helene Allerkamp,
  • Tim Henrik Sandermann,
  • Ngoc Hai Chu,
  • Eva Maria Funk,
  • Lukas Jonathan Hondrich,
  • Alina Riedel,
  • Christian Witzel and
  • René Hägerling
  • + 4 authors

17 June 2023

The placenta is the first embryonic organ, representing the connection between the embryo and the mother, and is therefore necessary for the embryo’s growth and survival. To meet the ever-growing need for nutrient and gas exchange, the maternal...

  • Feature Paper
  • Review
  • Open Access
12 Citations
7,447 Views
14 Pages

Sperm and Oocyte Chromosomal Abnormalities

  • Osamu Samura,
  • Yoshiharu Nakaoka and
  • Norio Miharu

17 June 2023

Gametogenesis, the process of producing gametes, differs significantly between oocytes and sperm. Most oocytes have chromosomal aneuploidies, indicating that chromosomal aberrations in miscarried and newborn infants are of oocyte origin. Conversely,...

  • Article
  • Open Access
4 Citations
2,893 Views
15 Pages

Dynamics of Urinary Extracellular DNA in Urosepsis

  • Michaela Mihaľová,
  • Nadja Šupčíková,
  • Alexandra Gaál Kovalčíková,
  • Ján Breza,
  • Ľubomíra Tóthová,
  • Peter Celec and
  • Ján Breza

17 June 2023

Extracellular DNA (ecDNA) is a promising candidate marker for the early diagnosis and monitoring of urinary tract infections (UTIs). The aim of our study is to describe the dynamics of ecDNA in the plasma and urine of patients with urosepsis as well...

  • Review
  • Open Access
42 Citations
7,957 Views
33 Pages

The Role of Trace Elements and Minerals in Osteoporosis: A Review of Epidemiological and Laboratory Findings

  • Anatoly V. Skalny,
  • Michael Aschner,
  • Ekaterina V. Silina,
  • Victor A. Stupin,
  • Oleg N. Zaitsev,
  • Tatiana I. Sotnikova,
  • Serafima Ia. Tazina,
  • Feng Zhang,
  • Xiong Guo and
  • Alexey A. Tinkov

17 June 2023

The objective of the present study was to review recent epidemiological and clinical data on the association between selected minerals and trace elements and osteoporosis, as well as to discuss the molecular mechanisms underlying these associations....

  • Review
  • Open Access
6 Citations
3,556 Views
13 Pages

17 June 2023

Preterm labor leading to preterm birth is the leading cause of infant morbidity and mortality. At the present time, nothing can reliably halt labor once it begins. The knowledge that agonists of the β2 adrenergic receptor relax airway smooth mus...

  • Review
  • Open Access
18 Citations
7,434 Views
17 Pages

Aldosterone: Essential for Life but Damaging to the Vascular Endothelium

  • Michael Crompton,
  • Laura J. Skinner,
  • Simon C. Satchell and
  • Matthew J. Butler

17 June 2023

The renin angiotensin aldosterone system is a key regulator of blood pressure. Aldosterone is the final effector of this pathway, acting predominantly via mineralocorticoid receptors. Aldosterone facilitates the conservation of sodium and, with it, w...

  • Article
  • Open Access
6 Citations
4,390 Views
17 Pages

17 June 2023

Endometriosis is an invasive condition that affects 10% of women (and people assigned as female at birth) worldwide. The purpose of this study was to characterize the relative invasiveness of three available endometriotic cell lines (EEC12Z, iEc-ESCs...

  • Article
  • Open Access
4 Citations
3,169 Views
14 Pages

Identification of the Stapled α-Helical Peptide ATSP-7041 as a Substrate and Strong Inhibitor of OATP1B1 In Vitro

  • Rika Ishikawa,
  • Kosuke Saito,
  • Takashi Misawa,
  • Yosuke Demizu and
  • Yoshiro Saito

16 June 2023

ATSP-7041, a stapled α-helical peptide that inhibits murine double minute-2 (MDM2) and MDMX activities, is a promising modality targeting protein–protein interactions. As peptides of molecular weights over 1000 Da are not usually evaluate...

  • Article
  • Open Access
4 Citations
3,142 Views
13 Pages

16 June 2023

The Wnt signaling pathway plays a critical role in regulating normal cellular processes, including proliferation, differentiation, and apoptosis. Dysregulation of Wnt signaling has been implicated in various human diseases, including cancer. β-c...

  • Article
  • Open Access
1 Citations
3,379 Views
18 Pages

Efflux Pump-Binding 4(3-Aminocyclobutyl)Pyrimidin-2-Amines Are Colloidal Aggregators

  • Tania Szal,
  • Shweta Singh Chauhan,
  • Philipp Lewe,
  • Fatima-Zahra Rachad,
  • Marina Madre,
  • Laura Paunina,
  • Susanne Witt,
  • Ramakrishnan Parthasarathi and
  • Björn Windshügel

16 June 2023

Efflux pumps are a relevant factor in antimicrobial resistance. In E. coli, the tripartite efflux pump AcrAB-TolC removes a chemically diverse set of antibiotics from the bacterium. Therefore, small molecules interfering with efflux pump function are...

  • Review
  • Open Access
7 Citations
3,437 Views
18 Pages

16 June 2023

Emerging pharmacological strategies that target major virulence factors of antibiotic-resistant Mycobacterium tuberculosis (Mtb) are presented and discussed. This review is divided into three parts corresponding to structures and functions important...

  • Review
  • Open Access
3 Citations
7,028 Views
23 Pages

Cell-Type-Specific Neuroproteomics of Synapses

  • Yun Young Yim and
  • Eric J. Nestler

16 June 2023

In the last two decades, our knowledge of synaptic proteomes and their relationship to normal brain function and neuropsychiatric disorders has been expanding rapidly through the use of more powerful neuroproteomic approaches. However, mass spectrome...

  • Review
  • Open Access
28 Citations
12,796 Views
27 Pages

Deciphering Plant-Insect-Microorganism Signals for Sustainable Crop Production

  • Gareth Thomas,
  • Quint Rusman,
  • William R. Morrison,
  • Diego M. Magalhães,
  • Jordan A. Dowell,
  • Esther Ngumbi,
  • Jonathan Osei-Owusu,
  • Jessica Kansman,
  • Alexander Gaffke and
  • Nurhayat Tabanca
  • + 2 authors

15 June 2023

Agricultural crop productivity relies on the application of chemical pesticides to reduce pest and pathogen damage. However, chemical pesticides also pose a range of ecological, environmental and economic penalties. This includes the development of p...

  • Article
  • Open Access
12 Citations
4,831 Views
27 Pages

15 June 2023

Sperm capacitation is a complex process endowing biological and biochemical changes to a spermatozoon for a successful encounter with an oocyte. The present study focused on the role of the ubiquitin–proteasome system (UPS) in the remodeling of...

  • Article
  • Open Access
5 Citations
3,760 Views
22 Pages

Blood Biomarkers in Takotsubo Syndrome Point to an Emerging Role for Inflammaging in Endothelial Pathophysiology

  • Michiaki Nagai,
  • Sergey Shityakov,
  • Manuel Smetak,
  • Hannah Jill Hunkler,
  • Christian Bär,
  • Nicolas Schlegel,
  • Thomas Thum and
  • Carola Yvette Förster

15 June 2023

Takotsubo syndrome (TTS), an acute cardiac condition characterized by transient wall motion abnormalities mostly of the left ventricle, results in difficulties in diagnosing patients. We set out to present a detailed blood analysis of TTS patients an...

  • Review
  • Open Access
12 Citations
4,561 Views
41 Pages

15 June 2023

Glycosylphosphatidylinositol (GPI)-anchored proteins (APs) are anchored at the outer leaflet of the plasma membrane (PM) bilayer by covalent linkage to a typical glycolipid and expressed in all eukaryotic organisms so far studied. Lipolytic release f...

  • Article
  • Open Access
5 Citations
2,686 Views
15 Pages

15 June 2023

Background: The carnitine/acylcarnitine carrier (CAC) represents the route of delivering acyl moieties to the mitochondrial matrix for accomplishing the fatty acid β-oxidation. The CAC has a couple of Cys residues (C136 and C155) most reactive t...

  • Article
  • Open Access
1 Citations
3,236 Views
14 Pages

15 June 2023

Proteasomes critically regulate proteostasis via protein degradation. Proteasomes are multi-subunit complexes composed of the 20S proteolytic core particle (20S CP) that, in association with one or two 19S regulatory particles (19S RPs), generates th...

  • Article
  • Open Access
11 Citations
3,467 Views
17 Pages

15 June 2023

High tumour programmed cell death-ligand 1 (PD-L1) expression is associated with poor progression-free survival (PFS) after tyrosine kinase inhibitor (TKI) therapy in ALK-rearranged non-small cell lung cancer (NSCLC). However, the characteristics of...

  • Article
  • Open Access
9 Citations
2,605 Views
11 Pages

14 June 2023

Cardiac tissue engineering is a promising strategy for the treatment of myocardial damage. Mesenchymal stem cells (MSCs) are extensively used in tissue engineering. However, transformation of MSCs into cardiac myocytes is still a challenge. Furthermo...

  • Article
  • Open Access
3 Citations
3,173 Views
35 Pages

Volatile Phases Derived from Serum, DC, or MLC Culture Supernatants to Deduce a VOC-Based Diagnostic Profiling Strategy for Leukemic Diseases

  • Tobias Baudrexler,
  • Tobias Boeselt,
  • Lin Li,
  • Sophia Bohlscheid,
  • Ursel Boas,
  • Christoph Schmid,
  • Andreas Rank,
  • Jörg Schmohl,
  • Rembert Koczulla and
  • Helga Maria Schmetzer

14 June 2023

Volatile organic compounds (VOCs) reflect the metabolism in healthy and pathological conditions, and can be collected easily in a noninvasive manner. They are directly measured using electronical nose (eNose), and may qualify as a systemic tool to mo...

  • Protocol
  • Open Access
2,054 Views
15 Pages

14 June 2023

Quality control-associated proteolysis (QCAP) is a fundamental mechanism that maintains cellular homeostasis by eliminating improperly folded proteins. In QCAP, the exposure of normally hidden cis-acting protein sequences, termed degrons, triggers mi...

  • Review
  • Open Access
22 Citations
8,151 Views
29 Pages

Pharmaceuticals Promoting Premature Termination Codon Readthrough: Progress in Development

  • Shan Li,
  • Juan Li,
  • Wenjing Shi,
  • Ziyan Nie,
  • Shasha Zhang,
  • Fengdie Ma,
  • Jun Hu,
  • Jianjun Chen,
  • Peiqiang Li and
  • Xiaodong Xie

14 June 2023

Around 11% of all known gene lesions causing human genetic diseases are nonsense mutations that introduce a premature stop codon (PTC) into the protein-coding gene sequence. Drug-induced PTC readthrough is a promising therapeutic strategy for treatin...

  • Review
  • Open Access
47 Citations
9,491 Views
25 Pages

Fungal Drug Discovery for Chronic Disease: History, New Discoveries and New Approaches

  • Thomas A. K. Prescott,
  • Rowena Hill,
  • Eduard Mas-Claret,
  • Ester Gaya and
  • Edie Burns

14 June 2023

Fungal-derived drugs include some of the most important medicines ever discovered, and have proved pivotal in treating chronic diseases. Not only have they saved millions of lives, but they have in some cases changed perceptions of what is medically...

  • Article
  • Open Access
13 Citations
4,631 Views
13 Pages

Comprehensive Characterization of Oils and Fats of Six Species from the Colombian Amazon Region with Industrial Potential

  • Kimberly Lozano-Garzón,
  • Luisa L. Orduz-Díaz,
  • Camilo Guerrero-Perilla,
  • Willian Quintero-Mendoza,
  • Marcela P. Carrillo and
  • Juliana E. C. Cardona-Jaramillo

13 June 2023

The Colombian Amazon is a megadiverse region with high potential for commercial use in the pharmaceutical, food, and cosmetic industries, constantly expanding and looking for new alternatives from natural resources; unfortunately, few characterizatio...

  • Review
  • Open Access
16 Citations
5,535 Views
20 Pages

13 June 2023

Lung cancer is the leading cause of cancer death worldwide. Molecularly targeted therapeutics and immunotherapy revolutionized the clinical care of NSCLC patients. However, not all NSCLC patients harbor molecular targets (e.g., mutated EGFR), and onl...

  • Feature Paper
  • Review
  • Open Access
25 Citations
6,447 Views
20 Pages

13 June 2023

Both sensory neurons and immune cells, albeit at markedly different levels, express the vanilloid (capsaicin) receptor, Transient Receptor Potential, Vanilloid-1 (TRPV1). Activation of TRPV1 channels in sensory afferent nerve fibers induces local eff...

  • Opinion
  • Open Access
14 Citations
4,050 Views
11 Pages

13 June 2023

Age-related macular degeneration (AMD), a leading cause of irreversible blindness in adults, may result in poor central vision, making it difficult to see, read, and drive. AMD is generally classified in either dry or wet types. Milder cases of dry A...

  • Review
  • Open Access
39 Citations
11,107 Views
25 Pages

Non-Canonical Amino Acids as Building Blocks for Peptidomimetics: Structure, Function, and Applications

  • Tarsila G. Castro,
  • Manuel Melle-Franco,
  • Cristina E. A. Sousa,
  • Artur Cavaco-Paulo and
  • João C. Marcos

12 June 2023

This review provides a fresh overview of non-canonical amino acids and their applications in the design of peptidomimetics. Non-canonical amino acids appear widely distributed in nature and are known to enhance the stability of specific secondary str...

  • Review
  • Open Access
6 Citations
3,596 Views
17 Pages

Synuclein Proteins in Cancer Development and Progression

  • Lucía C. Zanotti,
  • Florencia Malizia,
  • Nahuel Cesatti Laluce,
  • Aylén Avila,
  • Macarena Mamberto,
  • Luciano E. Anselmino and
  • Mauricio Menacho-Márquez

12 June 2023

Synucleins are a family of small, soluble proteins mainly expressed in neural tissue and in certain tumors. Since their discovery, tens of thousands of scientific reports have been published about this family of proteins as they are associated with s...

  • Communication
  • Open Access
1 Citations
3,966 Views
11 Pages

Real-Time Search-Assisted Multiplexed Quantitative Proteomics Reveals System-Wide Translational Regulation of Non-Canonical Short Open Reading Frames

  • Hiroko Kozuka-Hata,
  • Tomoko Hiroki,
  • Naoaki Miyamura,
  • Aya Kitamura,
  • Kouhei Tsumoto,
  • Jun-ichiro Inoue and
  • Masaaki Oyama

12 June 2023

Abnormal expression of histone deacetylases (HDACs) is reported to be associated with angiogenesis, metastasis and chemotherapy resistance regarding cancer in a wide range of previous studies. Suberoylanilide hydroxamic acid (SAHA) is well known to f...

  • Article
  • Open Access
6 Citations
5,813 Views
17 Pages

11 June 2023

Over several decades, excess glucocorticoids (GCs) of endogenous or exogenous origin have been recognized to significantly inhibit collagen synthesis and accelerate skin aging. However, little is known regarding their molecular mechanisms. We hypothe...

  • Article
  • Open Access
18 Citations
3,193 Views
18 Pages

Sex and Age Differences in a Progressive Synucleinopathy Mouse Model

  • Jérôme Lamontagne-Proulx,
  • Katherine Coulombe,
  • Marc Morissette,
  • Marie Rieux,
  • Frédéric Calon,
  • Thérèse Di Paolo and
  • Denis Soulet

11 June 2023

The mutation and overexpression of the alpha-synuclein protein (αSyn), described as synucleinopathy, is associated with Parkinson’s disease (PD)-like pathologies. A higher prevalence of PD is documented for men versus women, suggesting fe...

  • Article
  • Open Access
5 Citations
2,582 Views
10 Pages

11 June 2023

Nobo is a glutathione transferase (GST) crucially contributing to ecdysteroid biosynthesis in insects of the orders Diptera and Lepidoptera. Ecdysone is a vital steroid hormone in insects, which governs larval molting and metamorphosis, and the suppr...

  • Review
  • Open Access
19 Citations
3,856 Views
15 Pages

11 June 2023

As understanding their pathogenesis remains elusive, both endometriosis and adenomyosis are often referred to as “enigmatic diseases”. The uncertainty and heightened interest are reflected in the range of expressed views and opinions. The...

  • Article
  • Open Access
16 Citations
3,438 Views
12 Pages

11 June 2023

Interleukin 10 (IL-10) plays a role in inflammation and cell-type responses. The anti-SS-A/Ro antibody contributes to leucopenia, and cutaneous and neonatal lupus. Objectives: To evaluate the association between serum IL-10 levels and autoantibodies,...

  • Systematic Review
  • Open Access
11 Citations
3,831 Views
20 Pages

In Vitro Cytotoxicity of Antiresorptive and Antiangiogenic Compounds on Oral Tissues Contributing to MRONJ: Systematic Review

  • Robert H. Guirguis,
  • Leonard P. Tan,
  • Rebecca M. Hicks,
  • Aniqa Hasan,
  • Tina D. Duong,
  • Xia Hu,
  • Jordan Y. S. Hng,
  • Mohammad H. Hadi,
  • Henry C. Owuama and
  • Antonio Celentano
  • + 4 authors

10 June 2023

Background: Invasive dental treatment in patients exposed to antiresorptive and antiangiogenic drugs can cause medication-related osteonecrosis of the jaw (MRONJ). Currently, the exact pathogenesis of this disease is unclear. Methods: In March 2022,...

  • Review
  • Open Access
26 Citations
14,289 Views
23 Pages

Cellular and Molecular Activities of IP6 in Disease Prevention and Therapy

  • Lowell Dilworth,
  • Dewayne Stennett and
  • Felix Omoruyi

10 June 2023

IP6 (phytic acid) is a naturally occurring compound in plant seeds and grains. It is a poly-phosphorylated inositol derivative that has been shown to exhibit many biological activities that accrue benefits in health and diseases (cancer, diabetes, re...

  • Review
  • Open Access
7 Citations
3,158 Views
14 Pages

Mitigating Oxidative Stress in Perinatal Cells: A Critical Step toward an Optimal Therapeutic Use in Regenerative Medicine

  • Valeria Pizzuti,
  • Francesca Paris,
  • Pasquale Marrazzo,
  • Laura Bonsi and
  • Francesco Alviano

10 June 2023

Oxidative stress (OS) occurs when the production of reactive oxygen species (ROS) is not balanced by the body’s antioxidant defense system. OS can profoundly affect cellular health and function. ROS can have a profound negative impact on cells...

  • Article
  • Open Access
3 Citations
3,016 Views
19 Pages

Unconventional Source of Neurotoxic Protein Aggregation from Organelle Off-Target Bax∆2 in Alzheimer’s Disease

  • Qi Yao,
  • Anne Caroline Mascarenhas dos Santos,
  • Huaiyuan Zhang,
  • Adriana Mañas,
  • Ammarah Hussaini,
  • Ujin Kim,
  • Congtai Xu,
  • Sana Basheer,
  • Shinya Tasaki and
  • Jialing Xiang

10 June 2023

Protein aggregates are a hallmark of Alzheimer’s disease (AD). Extensive studies have focused on β-amyloid plaques and Tau tangles. Here, we illustrate a novel source of protein aggregates in AD neurons from organelle off-target proteins....

  • Article
  • Open Access
10 Citations
2,680 Views
14 Pages

The effects of methyl jasmonate (MeJ) on growth and taxoid formation in the cell culture of Taxus wallichiana were investigated to elucidate the specifics of phytohormone action in dedifferentiated plant cells in vitro. The characteristics of the sam...

  • Review
  • Open Access
37 Citations
10,335 Views
16 Pages

ESAT-6 a Major Virulence Factor of Mycobacterium tuberculosis

  • Elsa Anes,
  • David Pires,
  • Manoj Mandal and
  • José Miguel Azevedo-Pereira

Mycobacterium tuberculosis (Mtb), the causative agent of human tuberculosis (TB), is one of the most successfully adapted human pathogens. Human-to-human transmission occurs at high rates through aerosols containing bacteria, but the pathogen evolved...

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Biomolecules - ISSN 2218-273X