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Animals, Volume 15, Issue 15 (August-1 2025) – 168 articles

Cover Story (view full-size image): Respiratory disease is common in snakes and often has multiple causes, including a plethora of infectious agents. Mycoplasmas are bacteria that can cause respiratory disease in tortoises, but not much is known about them in snakes. To learn more about multiple infections and disease in snakes, we examined samples from 15 boas and pythons that were known to be mycoplasma-positive, with and without respiratory disease, using two molecular methods, polymerase chain reaction, and third-generation sequencing, as well as culture methods for mycoplasma isolation. Mycoplasmas, serpentoviruses, Chlamydia spp., and other bacteria species were detected. This study shows that using a full set of diagnostic tools can help understand multiple infections better and allow a more accurate detection and identification of different pathogens. View this paper
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13 pages, 1232 KB  
Article
Evaluation of Metabolic Characteristics Induced by Deoxynivalenol in 3D4/21 Cells
by Yu Han, Bo Yu, Wenao Weng, Liangyu Shi and Jing Zhang
Animals 2025, 15(15), 2324; https://doi.org/10.3390/ani15152324 - 7 Aug 2025
Viewed by 331
Abstract
Deoxynivalenol (DON) is a common mycotoxin that causes immunosuppression in pigs. Its effects on cellular metabolism remain unclear. In this study, we investigate DON-induced metabolic alterations in porcine alveolar macrophage cell line 3D4/21 using non-targeted metabolomics. MTT assays showed DON reduced cell viability [...] Read more.
Deoxynivalenol (DON) is a common mycotoxin that causes immunosuppression in pigs. Its effects on cellular metabolism remain unclear. In this study, we investigate DON-induced metabolic alterations in porcine alveolar macrophage cell line 3D4/21 using non-targeted metabolomics. MTT assays showed DON reduced cell viability in a concentration- and time-dependent manner. Principal component analysis (PCA) and orthogonal partial least squares discriminant analysis (OPLS-DA) revealed distinct metabolic profiles between control and DON-treated groups. Metabolomic analysis identified 127 differential metabolites (VIP > 1, p < 0.05), primarily in purine metabolism, glutathione metabolism, and arginine–proline metabolism. Integration with transcriptomic data confirmed that these pathways play key roles in DON-induced immunotoxicity. Specifically, changes in purine metabolism suggested disrupted nucleotide synthesis and energy balance, while glutathione depletion indicated weakened antioxidant defense. These findings provided a systems biology perspective on DON’s metabolic reprogramming of immune cells and identified potential therapeutic targets to reduce mycotoxin-related immunosuppression in swine. Full article
(This article belongs to the Section Animal Physiology)
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18 pages, 4153 KB  
Article
Whole-Genome Resequencing Analysis of Athletic Traits in Grassland-Thoroughbred
by Wenqi Ding, Wendian Gong, Tugeqin Bou, Lin Shi, Yanan Lin, Xiaoyuan Shi, Zheng Li, Huize Wu, Manglai Dugarjaviin and Dongyi Bai
Animals 2025, 15(15), 2323; https://doi.org/10.3390/ani15152323 - 7 Aug 2025
Viewed by 446
Abstract
Speed is not only the primary objective of racehorse breeding but also a crucial indicator for evaluating racehorse performance. This study investigates a newly developed racehorse breed in China. Through whole-genome resequencing, we selected 60 offspring obtained from the crossbreeding of Thoroughbred horses [...] Read more.
Speed is not only the primary objective of racehorse breeding but also a crucial indicator for evaluating racehorse performance. This study investigates a newly developed racehorse breed in China. Through whole-genome resequencing, we selected 60 offspring obtained from the crossbreeding of Thoroughbred horses and Xilingol horses for this study. This breed is tentatively named “Grassland-Thoroughbred”, and the samples were divided into two groups based on racing ability: 30 racehorses and 30 non-racehorses. Based on whole-genome sequencing data, the study achieved an average sequencing depth of 25.63×. The analysis revealed strong selection pressure on chromosomes (Chr) 1 and 3. Selection signals were detected using methods such as the nucleotide diversity ratio (π ratio), integrated haplotype score (iHS), fixation index (Fst), and cross-population extended haplotype homozygosity (XP-EHH). Regions ranked in the top 5% by at least three methods were designated as candidate regions. This approach detected 215 candidate genes. Additionally, the Fst method was employed to detect Indels, and the top 1% regions detected were considered candidate regions, covering 661 candidate genes. Functional enrichment analysis of the candidate genes suggests that pathways related to immune regulation, neural signal transmission, muscle contraction, and energy metabolism may significantly influence differences in performance. Among these identified genes, PPARGC1A, FOXO1, SGCD, FOXP2, PRKG1, SLC25A15, CKMT2, and TRAP1 play crucial roles in muscle function, metabolism, sensory perception, and neurobiology, indicating their key significance in shaping racehorse phenotypes. This study not only enhances understanding of the molecular mechanisms underlying racehorse speed but also provides essential theoretical and practical references for the molecular breeding of Grassland-Thoroughbreds. Full article
(This article belongs to the Section Animal Genetics and Genomics)
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17 pages, 560 KB  
Article
Pelleted Sulla Forage (Hedysarum coronarium L.) as a Resource for Sheep Feeding Systems: In Vitro Nutritional Value and Sustainability Perspectives
by Barbara Piccirillo, Marialetizia Ponte, Marianna Pipi, Antonino Di Grigoli, Adriana Bonanno, Monica I. Cutrignelli, Alessandro Vastolo and Serena Calabrò
Animals 2025, 15(15), 2322; https://doi.org/10.3390/ani15152322 - 7 Aug 2025
Viewed by 392
Abstract
Enhancing forage protein is key to sustainable ruminant nutrition. The nutritive value of Hedysarum coronarium L. was investigated by studying different preservation systems (fresh vs. dehydrated pellet vs. hay) (Exp. 1) and morphological fractions (flowers vs. leaves vs. stems) (Exp. 2). For the [...] Read more.
Enhancing forage protein is key to sustainable ruminant nutrition. The nutritive value of Hedysarum coronarium L. was investigated by studying different preservation systems (fresh vs. dehydrated pellet vs. hay) (Exp. 1) and morphological fractions (flowers vs. leaves vs. stems) (Exp. 2). For the fresh and pelleted systems, two cuts were used. Proximately, total polyphenols and condensed tannins were detected. In vitro fermentation characteristics were studied by incubating samples with buffered sheep rumen fluid, estimating methane production by volatile fatty acids. Fresh and pelleted sulla were more nutritionally advantageous than hay, in terms of metabolizable energy and protein-to-fiber ratio. Pelleting at the beginning of flowering proved to be a suitable forage for sheep feeding due to protein (15.1% DM), metabolizable energy (9.64 MJ/kg DM), structural carbohydrates (39.5% DM), and total polyphenols (13.5 GAE g/kg DM) content. This cut showed an in vitro fermentation rate (9.86 mL/h), organic matter degradability (55.7%), and volatile fatty acids (87.3 mmoL/g) that were higher (p < 0.05) than hay. Flowers and leaves showed higher (p < 0.05) levels of secondary metabolites than stems as well as lower methane production. These results suggest the potential influence of these compounds in reducing rumen emissions. Dehydration and pelleting resulted in an effective preservation method for maintaining nutrients in sulla forage. Full article
(This article belongs to the Section Animal Nutrition)
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14 pages, 375 KB  
Article
The Use of Humic Substances as an Additive to Feed Mixtures in Pheasant Breeding
by Alena Hreško Šamudovská, Stanislav Hreško, Iveta Maskaľová, Alica Tvrdá and Lukáš Bujňák
Animals 2025, 15(15), 2321; https://doi.org/10.3390/ani15152321 - 7 Aug 2025
Viewed by 451
Abstract
The effect of humic substances on growth performance, excretion, and the digestive organs was studied in pheasant chickens. Three hundred 1-day-old pheasant chicks were assigned to two equal groups. Chicks in the experimental group were fed diets supplemented with humic substances (5 g/kg). [...] Read more.
The effect of humic substances on growth performance, excretion, and the digestive organs was studied in pheasant chickens. Three hundred 1-day-old pheasant chicks were assigned to two equal groups. Chicks in the experimental group were fed diets supplemented with humic substances (5 g/kg). Chickens in the experimental group reached significantly higher average daily weight gains (p ˂ 0.05) in the second phase of rearing (29–49 d) at a significantly better feed conversion ratio (p ˂ 0.05). The supplementation of humic substances led to a significant increase in the average body weight of pheasants at the end of the experiment (p ˂ 0.05), and to a significant increase in average daily weight gains for the entire monitored period (p ˂ 0.05). In the experimental group, significantly higher relative weights of the gizzard (p ˂ 0.05), small intestine (p ˂ 0.05), and jejunum (p ˂ 0.05), along with a significantly larger relative length of the duodenum (p ˂ 0.05), were recorded. A significantly higher concentration of dry matter in the droppings of pheasants was found in the experimental group than in the control group (p ˂ 0.05). According to our results, feeding humic substances had the most beneficial effect on pheasant growth performance during the growing phase. Humic substances can also have a positive effect on the microclimate within the breeding facility. Reductions in the water content of droppings contribute to a reduction in the humidity of the litter, thus limiting the activity of nitrogenic bacteria. Full article
(This article belongs to the Section Poultry)
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23 pages, 620 KB  
Article
Unravelling Heterozygosity-Rich Regions in the Holstein Genome
by Michael Smaragdov
Animals 2025, 15(15), 2320; https://doi.org/10.3390/ani15152320 - 7 Aug 2025
Cited by 1 | Viewed by 413 | Correction
Abstract
Genomes of animals harbor not only homozygous (ROH) but also HRR segments of chromosomes. In the current study, the HRRs in Holstein cattle were analyzed using a 50K array. On average, 366 Holstein cows from six herds had 439 ± 7 and 111 [...] Read more.
Genomes of animals harbor not only homozygous (ROH) but also HRR segments of chromosomes. In the current study, the HRRs in Holstein cattle were analyzed using a 50K array. On average, 366 Holstein cows from six herds had 439 ± 7 and 111 ± 3 HRRs per cow when HRRs with a minimum length of 50 kb and 250 kb were detected, respectively. The average HRRs values did not differ between herds. Removal of SNP with an MAF less than 0.01 leads to a noticeable increase in the number of HRRs. The distribution of HRRs in the chromosomes of cows is not uniform and depends on the scanned lengths of the HRR segments. No clear correlations were found between interchromosomal HRR specific density and the occurrence of HRRIs. When HRR segments with a length of 50 kb or more have been detected, the significant HRRIs were located on BTA1, BTA10, BTA20, and BTA21(first set); for HRR segments with a length of 250 kb or more, significant islands were found on BTA9, BTA11, and BTA29 (second set). According to the Tajima D test, the islands on the BTA of the first set have maximum values of 3.47–2.82, while the islands on the BTA of the second set have values of less than 2.49. The genes in the HRRIs are involved in immune response, oogenesis, and reproduction but are not related to milk production traits. These results show that the recognition of HRRIs strongly depends on the length of the scanned HRR segments. No single “mechanism” was identified as the main cause of HRRIs. Full article
(This article belongs to the Section Cattle)
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18 pages, 3976 KB  
Article
Impact of Salinity Stress on Antioxidant Enzyme Activity, Histopathology, and Gene Expression in the Hepatopancreas of the Oriental River Prawn, Macrobrachium nipponense
by Shubo Jin, Zhenghao Ye, Hongtuo Fu, Yiwei Xiong, Hui Qiao, Wenyi Zhang and Sufei Jiang
Animals 2025, 15(15), 2319; https://doi.org/10.3390/ani15152319 - 7 Aug 2025
Viewed by 502
Abstract
Macrobrachium nipponense represents a commercial decapod species that predominantly inhabits freshwater ecosystems or environments with low salinity. However, the species exhibits normal survival and reproductive capacity in natural aquatic habitats with salinity levels up to 10 parts per thousand (ppt). The present study [...] Read more.
Macrobrachium nipponense represents a commercial decapod species that predominantly inhabits freshwater ecosystems or environments with low salinity. However, the species exhibits normal survival and reproductive capacity in natural aquatic habitats with salinity levels up to 10 parts per thousand (ppt). The present study aimed to elucidate the molecular mechanisms underlying salinity acclimation in M. nipponense by investigating alterations in oxidative stress, morphological adaptations, and hepatopancreatic gene expression profiles following exposure to a salinity level of 10 ppt. The present study demonstrates that glutathione peroxidase and Na+/K+-ATPase play critical roles in mitigating oxidative stress induced by elevated salinity in M. nipponense. Furthermore, histological analysis revealed distinct pathological alterations in the hepatopancreas of M. nipponense following 7-day salinity exposure, including basement-membrane disruption, luminal expansion, vacuolization, and a marked reduction in storage cells. Transcriptomic profiling of M. nipponense hepatopancreas suggested coordinated activation of both immune (lysosome and protein processing in endoplasmic reticulum pathways) and energy (pyruvate metabolism, glycolysis/gluconeogenesis, and citrate cycle) metabolic processes during salinity acclimation in M. nipponense. Quantitative real-time PCR validation confirmed the reliability of RNA-seq data. This study provides molecular insights into the salinity adaptation mechanisms in M. nipponense, offering potential applications for improving cultivation practices in brackish water environments. Full article
(This article belongs to the Special Issue Developmental Genetics of Adaptation in Aquatic Animals)
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15 pages, 1411 KB  
Article
Clinical and Molecular Characterization of Feline Sporotrichosis in the Brazilian Amazon: PCR-Based Identification of Sporothrix brasiliensis
by Nayara Fátima Lazameth-Diniz, Danielle Barreto de Almeida, Flávia da Silva Fernandes, Adriana Oliveira da Silva Queiroz, Érica Simplicio de Souza, Kátia Santana Cruz, Ani Beatriz Jackisch Matsuura, Hagen Frickmann and João Vicente Braga de Souza
Animals 2025, 15(15), 2318; https://doi.org/10.3390/ani15152318 - 7 Aug 2025
Viewed by 568
Abstract
Sporotrichosis is a zoonotic fungal infection with increasing incidence in the Brazilian Amazon, primarily affecting domestic cats and posing risks to human health. This study characterized the clinical and epidemiological profiles of 29 feline sporotrichosis cases in Manaus and optimized molecular diagnostic methods [...] Read more.
Sporotrichosis is a zoonotic fungal infection with increasing incidence in the Brazilian Amazon, primarily affecting domestic cats and posing risks to human health. This study characterized the clinical and epidemiological profiles of 29 feline sporotrichosis cases in Manaus and optimized molecular diagnostic methods for Sporothrix species identification. Most affected cats were young (86.2% aged 1–3 years), male (82.7%), and free-roaming or semi-indoor (44.8% each), frequently presenting cutaneous lesions localized at the nasal planum (23.3%), ears (7%), eyes (2.3%) and other facial areas (18.6%). Three DNA extraction methods were compared; the phenol–chloroform protocol yielded the highest DNA concentration and purity, and ITS1–ITS4 primers showed an adequate sensibility for PCR detection. In silico RFLP profiles using common restriction enzymes showed limited discriminatory power among Sporothrix species. ITS sequencing of four high-quality amplicons confirmed all isolates as Sporothrix brasiliensis. Antifungal susceptibility testing of all isolates revealed geometric mean MICs of 0.25 µg/mL for ketoconazole, 0.57 µg/mL for itraconazole, 7.27 µg/mL for amphotericin B, and 64 µg/mL for fluconazole, respectively. These findings provide clinical, molecular, and therapeutic information supporting the diagnosis and surveillance of feline sporotrichosis in the Amazon, reinforcing the need for ongoing veterinary and public health monitoring. Full article
(This article belongs to the Section Veterinary Clinical Studies)
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16 pages, 2818 KB  
Article
Thermographic Evaluation of the Stifle Region in Dogs with a Rupture of the Cranial Cruciate Ligament
by Tudor Căsălean, Cristian Zaha, Larisa Schuszler, Roxana Dascălu, Bogdan Sicoe, Răzvan Cojocaru, Andrei Călugărița, Ciprian Rujescu, Janos Degi and Romeo Teodor Cristina
Animals 2025, 15(15), 2317; https://doi.org/10.3390/ani15152317 - 7 Aug 2025
Viewed by 512
Abstract
Background: Canine cranial cruciate ligament (CCL) rupture is a common orthopedic condition leading to stifle joint dysfunction, discomfort, and reduced mobility. Diagnosis typically involves radiography, computed tomography (CT), and magnetic resonance imaging (MRI). In this study, we conducted a retrospective analysis to evaluate [...] Read more.
Background: Canine cranial cruciate ligament (CCL) rupture is a common orthopedic condition leading to stifle joint dysfunction, discomfort, and reduced mobility. Diagnosis typically involves radiography, computed tomography (CT), and magnetic resonance imaging (MRI). In this study, we conducted a retrospective analysis to evaluate the use of infrared thermography in assessing local temperature and thermal patterns in dogs with acute-onset lameness due to CCL rupture compared to those with intact ligaments. Methods: The study involved 12 dogs with cranial cruciate ligament rupture and nine dogs with intact ligaments. The stifle area of all dogs was clipped and scanned using a FLIR E50 thermographic camera. Two regions of interest (ROI), designated El1 and Bx1, were analyzed with FLIR Tools software 5.X by comparing the average of the maximum and of the mean temperature values between the two groups. Results: Thermal imaging revealed differences between the two groups of dogs, which were further supported by significantly higher temperatures in the El1 (lateral aspect of the stifle joint) and Bx1 (cranial aspect of the stifle joint) areas in the study group compared to the control group using a comparative analysis—two-sample t-test. In the El1 area, the study group showed a temperature increase of 1.8 °C compared to the control group, while in the Bx1 area, the difference was 1.76 °C. Conclusions: Infrared thermography shows potential to differentiate dogs with acute-onset lameness due to CCL rupture from dogs with intact ligaments, but further studies are needed to assess its accuracy in distinguishing it from other stifle pathologies. Full article
(This article belongs to the Special Issue Infrared Thermography in Animals)
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41 pages, 827 KB  
Systematic Review
Reviewing Evidence for the Impact of Lion Farming in South Africa on African Wild Lion Populations
by Jennah Green, Angie Elwin, Catherine Jakins, Stephanie-Emmy Klarmann, Louise de Waal, Madeleine Pinkess and Neil D’Cruze
Animals 2025, 15(15), 2316; https://doi.org/10.3390/ani15152316 - 7 Aug 2025
Viewed by 944
Abstract
The scope and scale of commercial captive lion breeding (CLB) in South Africa have rapidly increased since the 1990s. We conducted a qualitative systematic review using the PRISMA protocol to determine whether CLB provides a sustainable supply side intervention to reduce pressure on [...] Read more.
The scope and scale of commercial captive lion breeding (CLB) in South Africa have rapidly increased since the 1990s. We conducted a qualitative systematic review using the PRISMA protocol to determine whether CLB provides a sustainable supply side intervention to reduce pressure on wild lion populations. A search was performed using three academic databases for sources published between 2008 and 2023. We collated and reviewed the data using an evaluation framework to determine the potential benefits and threats of CLB in the context of conservation. Among the 126 peer-reviewed and 37 grey literature articles identified, we found evidence suggesting that the framework’s criteria were not fully met, raising concerns that CLB may facilitate the demand for lions, their parts, and derivatives. Our findings further indicate a reasonable cause to doubt that the CLB provides a sustainable supply side intervention to meet the commercial demand for lions, their parts, and derivatives. This could adversely impact conservation of wild lion populations. We conclude that further research is required to effectively evaluate the purported conservation benefits of CLB. These insights may also have implications for the policy and governance of commercial predator breeding operations in South Africa and globally. Full article
(This article belongs to the Section Ecology and Conservation)
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16 pages, 3939 KB  
Article
Effects of Dietary Ginger (Zingiber officinale) Rhizome Powder Supplementation on Productive Performance, Egg Quality, Antioxidant Capacity, and Hepato-Intestinal Morphology in Pre-Peak Xiaoshan Laying Hens
by Debela Bayu Derese, Hanxue Sun, Xihuai Xiong, Ziqing Li, Rahmani Mohammad Malyar, Lizhi Lu and Fangxiong Shi
Animals 2025, 15(15), 2315; https://doi.org/10.3390/ani15152315 - 7 Aug 2025
Viewed by 735
Abstract
Ginger powder (GP) has antioxidant properties and can be a suitable alternative to antibiotics in laying hen diets; however, research on its effects remains limited. Therefore, our study aimed to evaluate the impact of dietary GP supplementation on production performance during the pre-peak [...] Read more.
Ginger powder (GP) has antioxidant properties and can be a suitable alternative to antibiotics in laying hen diets; however, research on its effects remains limited. Therefore, our study aimed to evaluate the impact of dietary GP supplementation on production performance during the pre-peak production stage. A total of 270 hens, 18 weeks old and averaging 1.83 ± 0.03 kg, were divided into three groups: control (CN, basal diet), CN + 5 g/kg GP (T1), and CN + 10 g/kg GP (T2), with six replicates of 15 hens each, in a 10-week feeding trial. Dietary GP had no significant effect on feed intake (p > 0.05), but it dose-dependently improved laying rate, egg mass, and feed conversion ratio (p < 0.05). Egg quality parameters, including albumen height, Haugh unit, eggshell thickness, and strength, were also linearly improved with GP supplementation (p < 0.05). Dietary GP linearly enhanced the antioxidant status of hens (p < 0.01) and reduced malondialdehyde activity (p < 0.0001). Furthermore, 10 g/kg GP supplementation slightly improved gizzard index and liver morphology, and it linearly enhanced intestinal morphology (p < 0.01). These findings suggest that 10 g/kg GP supplementation can improve the productivity and health of laying hens. Full article
(This article belongs to the Section Poultry)
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19 pages, 1651 KB  
Article
Genetic Evaluation of Growth Traits in Black-Boned and Thai Native Synthetic Chickens Under Heat Stress
by Wootichai Kenchaiwong, Doungnapa Promket, Vatsana Sirisan, Vibuntita Chankitisakul, Srinuan Kananit and Wuttigrai Boonkum
Animals 2025, 15(15), 2314; https://doi.org/10.3390/ani15152314 - 7 Aug 2025
Viewed by 567
Abstract
Heat stress is a critical constraint to poultry production in tropical regions, where the temperature–humidity index (THI) frequently exceeds thermoneutral thresholds. Despite growing interest in climate-resilient livestock, limited research has explored the genetic sensitivity of local chicken breeds to increasing THI levels. This [...] Read more.
Heat stress is a critical constraint to poultry production in tropical regions, where the temperature–humidity index (THI) frequently exceeds thermoneutral thresholds. Despite growing interest in climate-resilient livestock, limited research has explored the genetic sensitivity of local chicken breeds to increasing THI levels. This study aimed to evaluate the genetic effects of increasing THI on growth performance traits in two tropical chicken breeds. The data included body weight (BW), average daily gain (ADG), and absolute growth rate (AGR) from 4,745 black-boned and 3,001 Thai native synthetic chickens across five generations. Growth data were collected from hatching to 12 weeks of age, whereas temperature and humidity were continuously recorded to calculate daily THI values. A reaction norm model was used to estimate genetic parameters and rate of decline of BW, ADG, and AGR traits under varying THI thresholds (THI70 to THI80). Results indicated that the onset of heat stress occurred at THI72 for black-boned chickens and at THI76 for Thai native synthetic chickens. Heritability estimates for BW, ADG, and AGR decreased as the THI increased in both chicken breeds. However, the Thai native synthetic chickens consistently exhibited higher genetic potential across all THI levels (average heritability: BW = 0.28, ADG = 0.25, AGR = 0.36) compared to the black-boned chickens (average heritability: BW = 0.21, ADG = 0.15, AGR = 0.23). Under mild heat stress (THI72), black-boned chickens showed sharp declines in all traits (average reduction in BW = −10.9 g, ADG = −0.87 g/day, AGR = −3.20 g/week), whereas Thai native synthetic chickens maintained stable performance. At THI76, both breeds experienced significant reductions, particularly in males. Estimated breeding values (EBVs) for AGR decreased linearly with THI, though Thai native synthetic chickens showed greater individual variability, with some birds maintaining stable or positive EBVs up to THI80—suggesting the presence of heat-resilient genotypes. In conclusion, Thai native synthetic chickens demonstrated superior thermotolerance and genetic robustness under increasing THI conditions. The identification of breed-specific THI thresholds and resilient individuals provides novel insights for climate-smart poultry breeding. These findings offer valuable tools for genetic selection, environmental management, and long-term adaptation strategies in response to global climate change. Full article
(This article belongs to the Section Poultry)
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14 pages, 646 KB  
Review
The Role of Sensor Technologies in Estrus Detection in Beef Cattle: A Review of Current Applications
by Inga Merkelytė, Artūras Šiukščius and Rasa Nainienė
Animals 2025, 15(15), 2313; https://doi.org/10.3390/ani15152313 - 7 Aug 2025
Viewed by 847
Abstract
Modern beef cattle reproductive management faces increasing challenges due to the growing global demand for beef. Reproductive efficiency is a critical factor determining the productivity and profitability of beef cattle operations. Optimal reproductive performance in a beef cattle herd is achieved when each [...] Read more.
Modern beef cattle reproductive management faces increasing challenges due to the growing global demand for beef. Reproductive efficiency is a critical factor determining the productivity and profitability of beef cattle operations. Optimal reproductive performance in a beef cattle herd is achieved when each cow produces one calf per year, maintaining a calving interval of 365 days. However, this goal is difficult to achieve, as the gestation period in beef cows lasts approximately 280 days, leaving only 80–85 days for successful conception. Traditional methods, such as visual estrus detection, are becoming increasingly unreliable due to expanding herd sizes and the subjectivity of visual observation. Additionally, silent estrus—where ovulation occurs without noticeable behavioral changes—further complicates the accurate estrous-based identification of the optimal insemination period. To enhance reproductive efficiency, advanced technologies are increasingly being integrated into cattle management. Sensor-based monitoring systems, including accelerometers, pedometers, and ruminoreticular boluses, enable the precise tracking of activity changes associated with the estrous cycle. Furthermore, infrared thermography offers a non-invasive method for detecting body temperature fluctuations, allowing for more accurate estrus identification and optimized timing of insemination. The use of these innovative technologies has the potential to significantly improve reproductive efficiency in beef cattle herds and contribute to overall farm productivity and sustainability. The objective of this review is to examine advancements in smart technologies applied to beef cattle reproductive management, presenting commercially available technologies and recent scientific studies on innovative systems. The focus is on sensor-based monitoring systems and infrared thermography for optimizing reproduction. Additionally, the challenges associated with these technologies and their potential to enhance reproductive efficiency and sustainability in the beef cattle industry are discussed. Despite the benefits of advanced technologies, their implementation in cattle farms is hindered by financial and technical challenges. High initial investment costs and the complexity of data analysis may limit their adoption, particularly in small and medium-sized farms. However, the continuous development of these technologies and their adaptation to farmers’ needs may significantly contribute to more efficient and sustainable reproductive management in beef cattle production. Full article
(This article belongs to the Special Issue Reproductive Management Strategies for Dairy and Beef Cows)
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16 pages, 10690 KB  
Article
Clade-Specific Recombination and Mutations Define the Emergence of Porcine Epidemic Diarrhea Virus S-INDEL Lineages
by Yang-Yang Li, Ke-Fan Chen, Chuan-Hao Fan, Hai-Xia Li, Hui-Qiang Zhen, Ye-Qing Zhu, Bin Wang, Yao-Wei Huang and Gairu Li
Animals 2025, 15(15), 2312; https://doi.org/10.3390/ani15152312 - 7 Aug 2025
Viewed by 543
Abstract
 Porcine epidemic diarrhea virus (PEDV) continues to circulate globally, causing substantial economic losses to the swine industry. Historically, PEDV strains are classified into the classical G1, epidemic G2, and S-INDEL genotypes. Among these genotypes, the highly virulent and prevalent G2 genotype has been [...] Read more.
 Porcine epidemic diarrhea virus (PEDV) continues to circulate globally, causing substantial economic losses to the swine industry. Historically, PEDV strains are classified into the classical G1, epidemic G2, and S-INDEL genotypes. Among these genotypes, the highly virulent and prevalent G2 genotype has been extensively studied. However, recent clinical outbreaks in China necessitate a reevaluation of the epidemiological and evolutionary dynamics of circulating strains. This study analyzed 37 newly sequenced S genes and public sequences to characterize the genetic variations of S-INDEL strains. Our analysis revealed that S-INDEL strains are endemic throughout China, with a phylogenetic analysis identifying two distinct clades: clade 1, comprising early endemic strains, and clade 2, representing a recently dominant, geographically restricted lineage in China. While inter-genotypic recombination has been documented, our findings also demonstrate that intra-genotypic and intra-clade recombination events contributed significantly to the emergence of clade 2, distinguishing its evolutionary pattern from clade 1. A comparative analysis identified 22 clade-specific amino acid changes, 11 of which occurred in the D0 domain. Notably, mutations at positively selected sites—113 and 114 within the D0 domain, a domain associated with pathogenicity—were specific to clade 2. A phylodynamic analysis indicated Germany as the epicenter of S-INDEL dispersal, with China acting as a sink population characterized by localized transmission networks and frequent recombination events. These results demonstrate that contemporary S-INDEL strains, specifically clade 2, exhibit unique recombination patterns and mutations potentially impacting virulence. Continuous surveillance is essential to assess the pathogenic potential of these evolving recombinant variants and the efficacy of vaccines against them.  Full article
(This article belongs to the Special Issue New Perspectives in Porcine Epidemic Diarrhea Virus (PEDV)—Second Edition)
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15 pages, 858 KB  
Article
Valorization of Coffee Cherry Pulp into Potential Functional Poultry Feed Additives by Pectinolytic Yeast Kluyveromyces marxianus ST5
by Thanongsak Chaiyaso, Kamon Yakul, Wilasinee Jirarat, Wanaporn Tapingkae, Orranee Srinual, Hien Van Doan and Pornchai Rachtanapun
Animals 2025, 15(15), 2311; https://doi.org/10.3390/ani15152311 - 7 Aug 2025
Viewed by 541
Abstract
Coffee cherry pulp (CCP), a coffee by-product rich in pectin and phenolic compounds, serves as a valuable substrate for microbial enzyme production, improving the nutritional and antioxidant properties of poultry feed. This study evaluated the potential of Kluyveromyces marxianus ST5 to produce pectin-degrading [...] Read more.
Coffee cherry pulp (CCP), a coffee by-product rich in pectin and phenolic compounds, serves as a valuable substrate for microbial enzyme production, improving the nutritional and antioxidant properties of poultry feed. This study evaluated the potential of Kluyveromyces marxianus ST5 to produce pectin-degrading enzymes using CCP. Under unoptimized conditions, the pectin lyase (PL) and polygalacturonase (PG) activities were 3.29 ± 0.22 and 6.32 ± 0.13 U/mL, respectively. Optimization using a central composite design (CCD) identified optimal conditions at 16.81% (w/v) CCP, 5.87% (v/v) inoculum size, pH 5.24, and 30 °C for 48 h, resulting in PL and PG activities of 9.17 ± 0.20 and 15.78 ± 0.14 U/mL, representing increases of 178.7% and 149.7% over unoptimized conditions. Fermented CCP was further evaluated using an in vitro chicken gastrointestinal digestion model. Peptide release increased by 66.2% compared with unfermented CCP. Antioxidant capacity also improved, with significant increases observed in DPPH (32.4%), ABTS (45.0%), and FRAP (42.3%) assays, along with an 11.1% increase in total phenolic content. These results demonstrate that CCP bioconversion by K. marxianus ST5 enhances digestibility and antioxidant properties, supporting its potential as a sustainable poultry feed additive and contributing to the valorization of agro-industrial waste. Full article
(This article belongs to the Special Issue Valorization of Agri-Food Waste Bioresources for Sustainable Livestock Feeding)
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16 pages, 1481 KB  
Article
Effects of Underwater Noise Exposure on Early Development in Zebrafish
by Tong Zhou, Yuchi Duan, Ya Li, Wei Yang and Qiliang Chen
Animals 2025, 15(15), 2310; https://doi.org/10.3390/ani15152310 - 7 Aug 2025
Viewed by 481
Abstract
Anthropogenic noise pollution is a significant global environmental issue that adversely affects the behavior, physiology, and auditory functions of aquatic species. However, studies on the effects of underwater noise on early developmental stages of fish remain scarce, particularly regarding the differential impacts of [...] Read more.
Anthropogenic noise pollution is a significant global environmental issue that adversely affects the behavior, physiology, and auditory functions of aquatic species. However, studies on the effects of underwater noise on early developmental stages of fish remain scarce, particularly regarding the differential impacts of daytime versus nighttime noise exposure. In this study, zebrafish (Danio rerio) embryos were exposed to control group (no additional noise), daytime noise (100–1000 Hz, 130 dB, from 08:00 to 20:00) or nighttime noise (100–1000 Hz, 130 dB, from 20:00 to 08:00) for 5 days, and their embryonic development and oxidative stress levels were analyzed. Compared to the control group, the results indicated that exposure to both daytime and nighttime noise led to delays in embryo hatching time and a significant decrease in larval heart rate. Notably, exposure to nighttime noise significantly increased the larval deformity rate. Noise exposure, particularly at night, elevated the activities of catalase (CAT) and glutathione peroxidase (GPX), as well as the concentration of malondialdehyde (MDA), accompanied by upregulation of antioxidant-related gene expression levels. Nighttime noise exposure significantly increased the abnormality rate of otolith development in larvae and markedly downregulated the expression levels of otop1 related to otolith development regulation, while daytime noise exposure only induced a slight increase in the otolith abnormality rate. After noise exposure, the number of lateral neuromasts in larvae decreased slightly, yet genes (slc17a8 and capgb) related to hair cell development were significantly upregulated. Overall, this study demonstrates that both daytime and nighttime noise can induce oxidative stress and impair embryonic development of zebrafish, with nighttime noise causing more severe damage. Full article
(This article belongs to the Section Animal Physiology)
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11 pages, 860 KB  
Article
Optimization of Duck Semen Freezing Procedure and Regulation of Oxidative Stress
by Zhicheng Wang, Haotian Gu, Chunhong Zhu, Yifei Wang, Hongxiang Liu, Weitao Song, Zhiyun Tao, Wenjuan Xu, Shuangjie Zhang and Huifang Li
Animals 2025, 15(15), 2309; https://doi.org/10.3390/ani15152309 - 6 Aug 2025
Viewed by 392
Abstract
Waterfowl semen cryopreservation technology is a key link in genetic resource conservation and artificial breeding, but poultry spermatozoa, due to their unique morphology and biochemical properties, are prone to oxidative stress during freezing, resulting in a significant decrease in vitality. In this study, [...] Read more.
Waterfowl semen cryopreservation technology is a key link in genetic resource conservation and artificial breeding, but poultry spermatozoa, due to their unique morphology and biochemical properties, are prone to oxidative stress during freezing, resulting in a significant decrease in vitality. In this study, we first used four different freezing procedures (P1–P4) to freeze duck semen and compared their effects on duck sperm quality. Then, the changes in antioxidant indexes in semen were monitored. The results showed that program P4 (initial 7 °C/min slow descent to −35 °C, followed by 60 °C/min rapid descent to −140 °C) was significantly better than the other programs (p < 0.05), and its post-freezing sperm vitality reached 71.41%, and the sperm motility was 51.73%. In the P1 and P3 groups, the sperm vitality was 65.56% and 53.41%, and the sperm motility was 46.99% and 31.76%, respectively. In terms of antioxidant indexes, compared with the fresh semen group (CK), the activities of superoxide dismutase (SOD), catalase (CAT), and glutathione peroxidase (GSH-px) in the P2 group were significantly decreased (p < 0.05), while the activities of SOD and CAT in the P4 group showed no significant changes (p > 0.05) except that the activity of GSH-px was significantly decreased (p < 0.05). And the CAT and GSH-px activities in the P4 group were significantly higher than those in the P2 group (p < 0.05). The content of malondialdehyde (MDA) in the P2 group was significantly higher than that in the fresh semen group (p < 0.05), and there was no significant difference between the P2 group and the P4 group (p > 0.05). The total antioxidant capacity (T-AOC) content of the P2 and P4 groups was significantly lower than that of the fresh semen group (p < 0.05). The staged cooling strategy of P4 was effective in reducing the exposure time to the hypertonic environment by balancing intracellular dehydration and ice crystal inhibition, shortening the reactive oxygen species accumulation and alleviating oxidative stress injury. On the contrary, the multi-stage slow-down strategy of P2 exacerbated mitochondrial dysfunction and the oxidative stress cascade response due to prolonged cryogenic exposure time. The present study confirmed that the freezing procedure directly affects duck sperm quality by modulating the oxidative stress pathway and provides a theoretical basis for the standardization of duck semen cryopreservation technology. Full article
(This article belongs to the Section Poultry)
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17 pages, 7479 KB  
Article
Development and Validation of a Custom-Built System for Real-Time Monitoring of In Vitro Rumen Gas Fermentation
by Zhen-Shu Liu, Bo-Yuan Chen, Jacky Peng-Wen Chan and Po-Wen Chen
Animals 2025, 15(15), 2308; https://doi.org/10.3390/ani15152308 - 6 Aug 2025
Viewed by 359
Abstract
While the Ankom RF system facilitates efficient high-throughput in vitro fermentation studies, its high cost and limited flexibility constrain its broader applicability. To address these limitations, we developed and validated a low-cost, modular gas monitoring system (FerME), assembled from commercially available components. To [...] Read more.
While the Ankom RF system facilitates efficient high-throughput in vitro fermentation studies, its high cost and limited flexibility constrain its broader applicability. To address these limitations, we developed and validated a low-cost, modular gas monitoring system (FerME), assembled from commercially available components. To evaluate its performance and reproducibility relative to the Ankom RF system (Ankom Technology, Macedon, NY, USA), in vitro rumen fermentation experiments were conducted under strictly controlled and identical conditions. Whole rumen contents were collected approximately 2 h post-feeding from individual mid- or late-lactation dairy cows and immediately transported to the laboratory. Each fermenter received 50 mL of processed rumen fluid, 100 mL of anaerobically prepared artificial saliva buffer, and 1.2 g of the donor cow’s diet. Bottles were sealed with the respective system’s pressure sensors, flushed with CO2, and incubated in a 50 L water bath maintained at 39 °C. FerME (New Taipei City, Taiwan) and Ankom RF fermenters were placed side-by-side to ensure uniform thermal conditions. To assess the effect of filter bag use, an additional trial employed Ankom F57 filter bags (Ankom Technology, Macedon, NY, USA; 25 μm pore size). Trial 1 revealed no significant differences in cumulative gas production, volatile fatty acids (VFAs), NH3-N, or pH between systems (p > 0.05). However, the use of filter bags reduced gas output and increased propionate concentrations (p < 0.05). Trial 2, which employed filter bags in both systems, confirmed comparable results, with the FerME system demonstrating improved precision (CV: 4.8% vs. 13.2%). Gas composition (CH4 + CO2: 76–82%) and fermentation parameters remained consistent across systems (p > 0.05). Importantly, with 12 pressure sensors, the total cost of FerME was about half that of the Ankom RF system. Collectively, these findings demonstrate that FerME is a reliable, low-cost alternative for real-time rumen fermentation monitoring and could be suitable for studies in animal nutrition, methane mitigation, and related applications. Full article
(This article belongs to the Section Animal System and Management)
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17 pages, 4825 KB  
Article
Tea Polyphenols Mitigate TBBPA-Induced Renal Injury Through Modulation of ROS-PI3K/AKT-NF-κB Signalling in Carp (Cyprinus carpio)
by Fuxin Han, Ran Xu, Hongru Wang, Xuejiao Gao and Mengyao Guo
Animals 2025, 15(15), 2307; https://doi.org/10.3390/ani15152307 - 6 Aug 2025
Viewed by 635
Abstract
Tetrabromobisphenol A (TBBPA), a widely utilised brominated flame retardant, demonstrates toxicological effects in aquatic organisms. Tea polyphenols (TPs), natural compounds found in tea leaves, exhibit both antioxidant and anti-inflammatory activities. The kidney is one of the major metabolic organs in common carp and [...] Read more.
Tetrabromobisphenol A (TBBPA), a widely utilised brominated flame retardant, demonstrates toxicological effects in aquatic organisms. Tea polyphenols (TPs), natural compounds found in tea leaves, exhibit both antioxidant and anti-inflammatory activities. The kidney is one of the major metabolic organs in common carp and serves as a target organ for toxic substances. This study evaluated the therapeutic potential of TPs in mitigating TBBPA-induced nephrotoxicity in common carp. Common carp were exposed to 0.5 mg/L TBBPA in water and/or fed a diet supplemented with 1 g/kg TPs for 14 days. In vitro, primary renal cells were treated with 60 μM TBBPA and/or 2.5 μg/L TPs for 24 h. Methods included histopathology, TUNEL assay for apoptosis, ROS detection, and molecular analyses. Antioxidant enzymes (SOD, CAT) and inflammatory cytokines (IL-1β, IL-6, TNF-α) were quantified using ELISA kits. Results showed that TBBPA induced oxidative stress, and activated the ROS-PI3K/AKT-NF-κB pathway, thereby resulting in inflammatory responses. TBBPA upregulated apoptosis-related genes (Caspase-3, Bax, and Bcl-2) and induced apoptosis. TBBPA upregulated the expression of RIPK3/MLKL, thereby exacerbating necroptosis. TPs intervention significantly mitigated these effects by reducing ROS, suppressing NF-κB activation, and restoring antioxidant enzyme activities (SOD, CAT). Moreover, TPs attenuated apoptosis and necrosis in the carp kidney, thereby enhancing the survival ability and immunity of common carp. Full article
(This article belongs to the Special Issue Effects of Plant Extracts on Meat Quality, Intestinal Microbiota and Resistance to Diseases and Stresses of Food Animals)
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14 pages, 280 KB  
Article
Effects of Dietary Puffed Jujube Powder on Growth Performance, Apparent Digestibility, and Meat Quality of Hainan Black Goats
by Yi Zhang, Jianzhi Shi, Jiapeng Wang, Keke Li, Xianzheng Qiao, Dong Chen, Tingting Dong, Yuanxiao Li, Yushu Zhang and Renlong Lv
Animals 2025, 15(15), 2306; https://doi.org/10.3390/ani15152306 - 6 Aug 2025
Viewed by 426
Abstract
This study was conducted to investigate the effects of puffed jujube powder (PJP) supplementation in the diet on the slaughter characteristics, growth performance, meat quality, and serum antioxidant capacity of Hainan Black (HB) goats. Twenty-four healthy male HB goats, three months old with [...] Read more.
This study was conducted to investigate the effects of puffed jujube powder (PJP) supplementation in the diet on the slaughter characteristics, growth performance, meat quality, and serum antioxidant capacity of Hainan Black (HB) goats. Twenty-four healthy male HB goats, three months old with an initial body weight of 15.12 ± 3.67 kg, were randomly divided into three groups: the 10% PJP group (basal diet plus 10% PJP); the 20% PJP group (basal diet plus 20% PJP); and the control group (basal diet only). After a 10-day adaptation period, a feeding trial was carried out for 90 days in an ad libitum diet environment. The results show that the final body weight of the 20% PJP group was markedly higher (p < 0.05) than that of the control group (22.58 ± 0.94 kg vs. 20.45 ± 1.01 kg). The average daily gain of the 20% PJP group was 83.44 ± 1.78 g/d, which was substantially greater (p < 0.05) than the 59.22 ± 2.13 g/d of the control group. The feed intake of the 20% PJP group was 713.10 ± 4.54 g/d, notably higher (p < 0.05) than the 498.20 ± 4.33 g/d of the control group. In terms of slaughter characteristics, the carcass weight of the 20% PJP group was 13.99 ± 1.22 kg, considerably heavier (p < 0.05) than the 11.79 ± 1.38 kg of the control group. The muscle weight of the 20% PJP group was 11.43 ± 1.42 kg, distinctly greater (p < 0.05) than the 9.59 ± 1.99 kg of the control group. The slaughter rate of the 20% PJP group was 42.41%, showing a notable increase (p < 0.05) compared with the 37.42% of the control group, and the net meat rate of the 20% PJP group was 34.65%, with a significant rise (p < 0.05) compared with the 30.43% of the control group. Regarding serum antioxidant capacity and meat quality, the activities of serum antioxidant enzymes, superoxide dismutase (SOD) and catalase (CAT), were conspicuously increased (p < 0.05) in the 20% PJP group. The meat shear force of the 20% PJP group was decreased by 12.9%, and the cooking loss was improved by 8.9% in comparison with the control group. In conclusion, the supplementation of 20% PJP in the diet was demonstrated to enhance the growth performance, improve the meat quality, and boost the antioxidant status of HB goats, thus presenting a feasible strategy for optimizing tropical goat production systems. Full article
(This article belongs to the Section Animal Nutrition)
15 pages, 1805 KB  
Article
Indoor Application of Coupled FLOCponics System with Caipira Lettuce (Lactuca sativa) Affects the Growth Performance and Water Characteristics of Far Eastern Catfish (Silurus asotus) and Tropical Eel (Anguilla bicolor)
by Jun Seong Park, Hae Seung Jeong, Jeong-ho Lee and Ju-ae Hwang
Animals 2025, 15(15), 2305; https://doi.org/10.3390/ani15152305 - 6 Aug 2025
Viewed by 386
Abstract
In this study, we sought to improve the productivity of Far Eastern catfish (Silurus asotus) and tropical eel (Anguilla bicolor), which are high-value fish species in the Republic of Korea, as well as that of associated crops by applying [...] Read more.
In this study, we sought to improve the productivity of Far Eastern catfish (Silurus asotus) and tropical eel (Anguilla bicolor), which are high-value fish species in the Republic of Korea, as well as that of associated crops by applying biofloc technology (BFT)-based aquaponics systems. The following three systems were used: the flow-through system (FTS), BFT, and BFT aquaponics system (BAPs). Caipira lettuce (Lactuca sativa) was utilized and hydroponics (HP) was implemented to compare crop productivity. After 42 days of treatment, the BAPs and BFT systems improved fish productivity, with weight gain rates of 134.47 ± 1.80% in BAPs-cat, 130.38 ± 0.95% in BFT, and 114.21 ± 6.62% in FTS for S. asotus, and 70.61 ± 3.26% in BAPs-eel, 62.37 ± 7.04% in BFT, and 47.83 ± 1.09% in FTS for A. bicolor. During the experiment, the total ammonia nitrogen and NO2−-N concentrations were stable in all plots. In the case of NO3−-N, BFT showed an increasing tendency while both BAPs showed a decrease compared with that of the BFT. BAPs-cat (total weight: 224.1 ± 6.37 g) and HP (220.3 ± 7.17 g) resulted in similar growth. However, in BAPs-eel was 187.7 ± 3.46 g due to root degradation. Water content analysis showed that BAPs-cat and BAPs-eel contained sufficient K, Ca, P, and S, which are important for crop growth. Overall, the effect of BAPs on fish growth was higher than that of FTS. This study reveals that integrating BFT with aquaponics improves productivity for high-value fish and associated crops while maintaining stable water quality. This method offers sustainable, efficient production, reduces environmental impact, and provides insights for future research in sustainable aquaculture practices. Full article
(This article belongs to the Special Issue Innovations in Aquaculture: New Technologies, Culture Systems and Integration of Emerging Species)
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18 pages, 3673 KB  
Article
Does Short-Distance Migration Facilitate the Recovery of Black-Necked Crane Populations?
by Le Yang, Lei Xu, Waner Liang, Jia Guo, Yongbing Yang, Cai Lyu, Shengling Zhou, Qing Zeng, Yifei Jia and Guangchun Lei
Animals 2025, 15(15), 2304; https://doi.org/10.3390/ani15152304 - 6 Aug 2025
Viewed by 381
Abstract
Understanding the migratory strategies of plateau-endemic species is essential for informing effective conservation, especially under climate change. The Black-necked Crane (Grus nigricollis), a high-altitude specialist, has shown notable population growth in recent years. We analysed satellite tracking data from 16 individuals [...] Read more.
Understanding the migratory strategies of plateau-endemic species is essential for informing effective conservation, especially under climate change. The Black-necked Crane (Grus nigricollis), a high-altitude specialist, has shown notable population growth in recent years. We analysed satellite tracking data from 16 individuals of a western subpopulation in the lake basin region of northern Tibet (2021–2024), focusing on migration patterns, stopover use, and habitat selection. This subpopulation exhibited short-distance (mean: 284.21 km), intra-Tibet migrations with low reliance on stopover sites. Autumn migration was shorter, more direct, higher in altitude, and slower in speed than spring migration. Juveniles used smaller, more fragmented habitats than subadults, and their spatial range expanded over time. Given these patterns, we infer that the short-distance migration strategy may reduce energetic demands and mortality risks while increasing route flexibility—characteristics that may benefit population growth. We refer to this as a low-energy, high-efficiency migration strategy, which we hypothesise could support faster population growth and enhance resilience to environmental change. We recommend prioritizing the conservation of short-distance migration corridors, such as the typical lake basin area in northern Tibet–Yarlung Tsangpo River system, which may help sustain plateau-endemic migratory populations under future climate scenarios. Full article
(This article belongs to the Section Ecology and Conservation)
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16 pages, 1185 KB  
Article
Hematological, Enzymatic, and Endocrine Response to Intense Exercise in Lidia Breed Cattle During the Roping Bull Bullfighting Celebration
by Julio Sedeño, Salvador Ruiz, Germán Martín and Juan Carlos Gardón
Animals 2025, 15(15), 2303; https://doi.org/10.3390/ani15152303 - 6 Aug 2025
Viewed by 725
Abstract
The Lidia cattle breed is featured in several traditional popular bullfighting festivals throughout Spain, including the “Toro de Cuerda” event, in which the animals are subjected to intense physical exercise. However, the physiological impact and welfare implications of these activities remain poorly characterized. [...] Read more.
The Lidia cattle breed is featured in several traditional popular bullfighting festivals throughout Spain, including the “Toro de Cuerda” event, in which the animals are subjected to intense physical exercise. However, the physiological impact and welfare implications of these activities remain poorly characterized. This study aimed to evaluate the stress response and muscle damage in Lidia breed bulls during roping bull celebrations through comprehensive blood analysis. Blood samples were collected from 53 adult male Lidia bulls before and after a standardized 45 min continuous running exercise during traditional roping bull events in four Spanish autonomous regions. Hematological parameters, muscle enzymes (creatine kinase, lactate dehydrogenase, lactate), and stress hormones (cortisol and ACTH) were analyzed. Significant increases (p < 0.05) were observed in leukocytes, lymphocytes, monocytes, eosinophils, neutrophils, erythrocytes, hematocrit, hemoglobin, and post-exercise platelets. Muscle enzymes showed marked elevations, with creatine kinase increasing up to 10-fold above baseline values. Stress hormones, cortisol and ACTH, also demonstrated significant increases. Despite the magnitude of these changes, all parameters remained within established reference ranges for the bovine species. This study provides the first physiological assessment of Lidia cattle during popular bullfighting celebrations, establishing baseline data for evidence-based welfare evaluation and management protocols. Full article
(This article belongs to the Section Cattle)
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20 pages, 277 KB  
Article
A Quantitative Exploration of Australian Dog Breeders’ Breeding Goals, Puppy Rearing Practices and Approaches to Socialisation
by Jessica K. Dawson, Deanna L. Tepper, Matthew B. Ruby, Tiffani J. Howell and Pauleen C. Bennett
Animals 2025, 15(15), 2302; https://doi.org/10.3390/ani15152302 - 6 Aug 2025
Viewed by 1486
Abstract
Millions of puppies are welcomed into the homes of families around the world each year. However, understanding the ways in which puppies are bred and raised by their breeders, as well as the perspectives and perceptions underpinning these practices, is still in its [...] Read more.
Millions of puppies are welcomed into the homes of families around the world each year. However, understanding the ways in which puppies are bred and raised by their breeders, as well as the perspectives and perceptions underpinning these practices, is still in its infancy. The current study administered an online survey to 200 Australian dog breeders to investigate their breeding program characteristics, breeding dog selection, understanding of the importance of early experiences in puppyhood, and the extent and diversity of their puppy rearing and socialisation practices. Results indicated that breeders were motivated by breed improvement and producing dogs for themselves rather than providing companion dogs, despite most of their puppies being placed in companionship roles. The participating breeders also acknowledged the important role they play in shaping puppies’ behaviour and temperament, which was reflected in both their breeding dog selection and in their rearing and socialisation practices. The majority of breeders housed their litters within their residence for the initial weeks of life but the socialisation experiences they provided were variable in type and frequency. Longer-term breeders and those with larger, more intensive programs reported providing human-focused socialisation experiences less frequently, though the correlational nature of these findings require cautious interpretation. Whilst future research should endeavor to explore these results more comprehensively among a more diverse sample, these findings provide valuable insight into the breeding, rearing, and socialisation process undertaken by dog breeders in Australia. Full article
(This article belongs to the Section Animal Welfare)
15 pages, 1321 KB  
Article
Detection of Cathelicidin-1 and Cathelicidin-2 Biomolecules in the Milk of Goats and Their Use as Biomarkers for the Diagnosis of Mastitis
by Maria V. Bourganou, Dimitra V. Liagka, Konstantinos Vougas, Daphne T. Lianou, Natalia G. C. Vasileiou, Konstantina S. Dimoveli, Antonis P. Politis, Nikos G. Kordalis, Efthymia Petinaki, Vasia S. Mavrogianni, George Th. Tsangaris, George C. Fthenakis and Angeliki I. Katsafadou
Animals 2025, 15(15), 2301; https://doi.org/10.3390/ani15152301 - 6 Aug 2025
Viewed by 509
Abstract
The objectives of the present work were as follows: (i) the detection of cathelicidin biomolecules in the milk of individual goats during the early stages of mastitis and their potential use for the diagnosis of mastitis at its early stage and (ii) the [...] Read more.
The objectives of the present work were as follows: (i) the detection of cathelicidin biomolecules in the milk of individual goats during the early stages of mastitis and their potential use for the diagnosis of mastitis at its early stage and (ii) the evaluation of the presence of cathelicidin proteins in the bulk-tank milk from goat and sheep farms. In an experimental study, after inoculation of Staphylococcus simulans into a mammary gland of goats, bacteriological and cytological examinations of milk samples, as well as proteomics examinations [two-dimensional gel electrophoresis analysis (2-DE) and matrix-assisted laser desorption/ionization time-of-flight mass spectrometer (MALDI-TOF MS) analysis] were performed sequentially, from 4 to 48 h post-challenge. Cathelicidin-1 and cathelicidin-2 were detected consistently in milk samples obtained throughout the study, and spot optical densities obtained from PDQuest v.8.0 were recorded. Associations were calculated between the presence of mastitis in a mammary gland at a given timepoint and the detection of cathelicidin proteins in the respective milk sample. All inoculated mammary glands developed mastitis, confirmed by the consistent bacterial isolation from milk samples and the increased somatic cell content therein. Spot optical density of cathelicidin proteins was higher than in samples from contralateral mammary glands. There was a significant association between the presence of mastitis in a mammary gland and the detection of cathelicidin biomolecules in the respective milk sample; the overall accuracy was 81.8% (95% confidence interval: 70.4–90.2%). In a field investigation, the presence of cathelicidin proteins was evaluated in the bulk-tank milk of 32 dairy goat and 57 dairy sheep farms. In this part of the work, no cathelicidin proteins were detected in any bulk-tank milk sample of goat, 0.0% (95% confidence interval: 0.0–10.7%), or sheep, 0.0% (95% confidence interval: 0.0–6.3%), farms. Full article
(This article belongs to the Section Veterinary Clinical Studies)
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16 pages, 1298 KB  
Article
Genetic Effects of Chicken Pre-miR-3528 SNP on Growth Performance, Meat Quality Traits, and Serum Enzyme Activities
by Jianzhou Shi, Jinbing Zhao, Bingxue Dong, Na Li, Lunguang Yao and Guirong Sun
Animals 2025, 15(15), 2300; https://doi.org/10.3390/ani15152300 - 6 Aug 2025
Viewed by 409
Abstract
The aim was to investigate the genetic effects of a SNP located in the precursor region of gga-miR-3528. (1) Single-nucleotide polymorphisms within precursor regions of microRNAs play crucial biological roles. (2) Utilizing a Gushi–Anka F2 resource population (n = 860), [...] Read more.
The aim was to investigate the genetic effects of a SNP located in the precursor region of gga-miR-3528. (1) Single-nucleotide polymorphisms within precursor regions of microRNAs play crucial biological roles. (2) Utilizing a Gushi–Anka F2 resource population (n = 860), we screened and validated miRNA SNPs. A SNP mutation in the miR-3528 precursor region was identified. Specific primers were designed to amplify the polymorphic fragment. Genotyping was performed for this individual SNP across the population, using the MassArray system. Association analyses were conducted between this SNP and chicken growth and body measurement traits, carcass traits, meat quality traits, and serum enzyme activities. (3) The rs14098602 (+12 bp A > G) was identified within the precursor region of gga-miR-3528. Significant associations (p < 0.05) were observed between this SNP and chicken growth traits (body weight at the age of 0 day, body weight at the age of 2 weeks, and body weight at the age of 4 weeks), carcass traits (evisceration weight), meat quality traits (subcutaneous fat rate and pectoral muscle density), and serum enzyme activities (total protein, albumin, globulin, cholinesterase, and lactate dehydrogenase). (4) These findings suggest that the polymorphism at rs14098602 may influence chicken growth, meat quality, and serum biochemical indices, through specific mechanisms. The gga-miR-3528 gene likely plays an important role in chicken development. Therefore, this SNP can serve as a molecular marker for genetic breeding and auxiliary selection of growth-related traits, facilitating the rapid establishment of elite chicken populations with superior genetic resources. Full article
(This article belongs to the Section Poultry)
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24 pages, 5022 KB  
Article
Aging-Invariant Sheep Face Recognition Through Feature Decoupling
by Suhui Liu, Chuanzhong Xuan, Zhaohui Tang, Guangpu Wang, Xinyu Gao and Zhipan Wang
Animals 2025, 15(15), 2299; https://doi.org/10.3390/ani15152299 - 6 Aug 2025
Viewed by 414
Abstract
Precise recognition of individual ovine specimens plays a pivotal role in implementing smart agricultural platforms and optimizing herd management systems. With the development of deep learning technology, sheep face recognition provides an efficient and contactless solution for individual sheep identification. However, with the [...] Read more.
Precise recognition of individual ovine specimens plays a pivotal role in implementing smart agricultural platforms and optimizing herd management systems. With the development of deep learning technology, sheep face recognition provides an efficient and contactless solution for individual sheep identification. However, with the growth of sheep, their facial features keep changing, which poses challenges for existing sheep face recognition models to maintain accuracy across the dynamic changes in facial features over time, making it difficult to meet practical needs. To address this limitation, we propose the lifelong biometric learning of the sheep face network (LBL-SheepNet), a feature decoupling network designed for continuous adaptation to ovine facial changes, and constructed a dataset of 31,200 images from 55 sheep tracked monthly from 1 to 12 months of age. The LBL-SheepNet model addresses dynamic variations in facial features during sheep growth through a multi-module architectural framework. Firstly, a Squeeze-and-Excitation (SE) module enhances discriminative feature representation through adaptive channel-wise recalibration. Then, a nonlinear feature decoupling module employs a hybrid channel-batch attention mechanism to separate age-related features from identity-specific characteristics. Finally, a correlation analysis module utilizes adversarial learning to suppress age-biased feature interference, ensuring focus on age-invariant identifiers. Experimental results demonstrate that LBL-SheepNet achieves 95.5% identification accuracy and 95.3% average precision on the sheep face dataset. This study introduces a lifelong biometric learning (LBL) mechanism to mitigate recognition accuracy degradation caused by dynamic facial feature variations in growing sheep. By designing a feature decoupling network integrated with adversarial age-invariant learning, the proposed method addresses the performance limitations of existing models in long-term individual identification. Full article
(This article belongs to the Section Animal System and Management)
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17 pages, 357 KB  
Article
Evaluation of Cervical Myoclonus in Dogs with Spinal Diseases: 113 Cases (2014–2023)
by Ana Martinez, Emili Alcoverro, Edward Ives and Lisa Alves
Animals 2025, 15(15), 2298; https://doi.org/10.3390/ani15152298 - 6 Aug 2025
Viewed by 631
Abstract
Cervical myoclonus (CM) has been associated with intervertebral disc extrusion (IVDE), with a higher prevalence in French Bulldogs. The presence of CM in other breeds and with other aetiologies has not been reported. The purpose of this study was to describe the signalment, [...] Read more.
Cervical myoclonus (CM) has been associated with intervertebral disc extrusion (IVDE), with a higher prevalence in French Bulldogs. The presence of CM in other breeds and with other aetiologies has not been reported. The purpose of this study was to describe the signalment, neurological examination, neuroanatomical localisation and grade, imaging findings, diagnosis, treatment, follow-up and resolution of CM in dogs. An observational multicentred retrospective analysis identified 173 dogs with CM; of those, 113 met the inclusion criteria. French Bulldogs (n = 52/113, 46%), Beagles (n = 8/113, 7.1%), Chihuahuas and Shih-Tzus (n = 6/113 for each, 5.31%) were the most affected breeds. Apparent cervical pain was the most common finding on neurologic examination (n = 70/113, 62%). Magnetic resonance imaging (MRI) was consistent with nerve root impingement in 17% (n = 19/113) of the dogs. The most frequently diagnosed conditions were degenerative (n = 100/113, 88.5%), inflammatory (n = 8/113, 7.1%), neoplastic (n = 3/113, 2.7%), vascular (n = 1/113, 0.9%) and congenital (n = 1/113, 0.9%) in origin. Dogs with a neoplastic aetiology tended to be older than those with other causes. Follow-up was recorded in 77 dogs, and 75 of these (n = 75/77, 97.4%) had resolution of the CM. The results supported that cervical myoclonus can be caused by various underlying conditions and can affect different dog breeds. Full article
(This article belongs to the Section Veterinary Clinical Studies)
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16 pages, 540 KB  
Article
Comparison of Dietary Inorganic and Small-Peptide Chelating Trace Minerals on Growth Performance, Immunity, Meat Quality, and Environmental Release in Litopenaeus vannamei
by Jingshen Chen, Nan Liu, Shumeng Wang, Hailong Wang, Kun Ouyang, Yuxuan Wang, Junyi Luo, Jiajie Sun, Qianyun Xi, Yuping Sun, Yongguo Si, Yongliang Zhang and Ting Chen
Animals 2025, 15(15), 2297; https://doi.org/10.3390/ani15152297 - 6 Aug 2025
Viewed by 372
Abstract
The present study evaluated the effect of adding 0% (control), 30%, 40% and 50% SPMs (small-peptide chelating trace minerals) to replace ITMs (inorganic trace minerals) in the diets of Litopenaeus vannamei; 720 shrimp were randomly assigned to four treatments (six replicates per [...] Read more.
The present study evaluated the effect of adding 0% (control), 30%, 40% and 50% SPMs (small-peptide chelating trace minerals) to replace ITMs (inorganic trace minerals) in the diets of Litopenaeus vannamei; 720 shrimp were randomly assigned to four treatments (six replicates per group, 30 shrimp per replicate) in a 42-day feeding trial. There were no significant differences (p > 0.05) among the control, 40% SPM and 50% SPM groups in terms of the survival rate, weight gain rate, specific growth rate, hepatosomatic index, condition factor, feed intake, feed conversion ratio, or protein efficiency ratio; however, protein efficiency ratio was reduced in the 30% SPM group (p < 0.05). Glucose, triglyceride, and aspartate aminotransferase levels in the hemolymph of the 30% SPM group were significantly increased (p < 0.05), while the glucose and aspartate aminotransferase levels were also significantly increased in the 40% SPM group (p < 0.05). In the 50% SPM group, the glucose and triglyceride levels were also significantly increased (p < 0.05). Hepatopancreatic alkaline phosphatase activity was elevated at 40% SPM, and alkaline phosphatase, acid phosphatase, glutathione peroxidase, and total antioxidant capacity activities were significantly increased in the 50% SPM group (p < 0.05). The moisture content and drip loss were reduced in both the 40% and 50% SPM groups (p < 0.05). Therefore, replacing 40–50% ITMs with SPMs can maintain growth performance while enhancing physiological functions. In conclusion, the results of this study demonstrate that the incorporation of 30–50% SPMs into one’s diet constitutes a viable alternative to 100% ITMs. Full article
(This article belongs to the Section Aquatic Animals)
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17 pages, 1696 KB  
Review
Reproductive Challenges in Ruminants Under Heat Stress: A Review of Follicular, Oocyte, and Embryonic Responses
by Danisvânia Ripardo Nascimento, Venância Antonia Nunes Azevedo, Regislane Pinto Ribeiro, Gabrielle de Oliveira Ximenes, Andreza de Aguiar Silva, Efigênia Cordeiro Barbalho, Laryssa Gondim Barrozo, Sueline Cavalcante Chaves, Maria Samires Martins Castro, Erica Costa Marcelino, Leopoldo Rugieri Carvalho Vaz da Silva, André Mariano Batista and José Roberto Viana Silva
Animals 2025, 15(15), 2296; https://doi.org/10.3390/ani15152296 - 6 Aug 2025
Viewed by 745
Abstract
This review aims to discuss how heat stress affects ovarian follicles and oocytes, steroidogenesis, and embryo development in ruminants. The literature shows that quiescent primordial follicles appear to be less susceptible to heat stress, but from the primary follicle stage onwards, they begin [...] Read more.
This review aims to discuss how heat stress affects ovarian follicles and oocytes, steroidogenesis, and embryo development in ruminants. The literature shows that quiescent primordial follicles appear to be less susceptible to heat stress, but from the primary follicle stage onwards, they begin to suffer the consequences of heat stress. These adverse effects are exacerbated when the follicles are cultured in vitro. In antral follicles, heat stress reduces granulosa cell viability and proliferation in both in vivo and in vitro models. Oocyte maturation, both nuclear and cytoplasmic, is also compromised, and embryo quality declines under elevated thermal conditions. These effects are linked to intracellular disturbances, including oxidative imbalance, mitochondrial dysfunction, and altered hormonal signaling. The differences between in vivo and in vitro responses reflect the complexity of the biological impact of heat stress and emphasize the protective role of the physiological microenvironment. A better understanding of how heat stress alters the function of ovarian follicles, oocytes, and embryos is crucial. This knowledge is critical to devise effective strategies that mitigate damage, support fertility, and improve outcomes in assisted reproduction for livestock exposed to high environmental temperatures. Full article
(This article belongs to the Special Issue Environmental Stressors and Reproductive Biology: Impacts, Evaluation, and Alleviation)
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10 pages, 1283 KB  
Communication
Optimized Ribonucleoprotein Complexes Enhance Prime Editing Efficiency in Zebrafish
by Lang Qin and Qiupeng Lin
Animals 2025, 15(15), 2295; https://doi.org/10.3390/ani15152295 - 6 Aug 2025
Viewed by 687
Abstract
Prime editing (PE) has emerged as a transformative genome editing technology, enabling precise base substitutions, insertions, and deletions without inducing double-strand DNA breaks (DSBs). However, its application in zebrafish remains limited by low efficiency. Here, we leveraged PE7, a state-of-the-art PE system, combined [...] Read more.
Prime editing (PE) has emerged as a transformative genome editing technology, enabling precise base substitutions, insertions, and deletions without inducing double-strand DNA breaks (DSBs). However, its application in zebrafish remains limited by low efficiency. Here, we leveraged PE7, a state-of-the-art PE system, combined with La-accessible prime editing guide RNAs (pegRNAs), to enhance editing efficiency in zebrafish. By co-incubating PE7 protein with La-accessible pegRNAs to form ribonucleoprotein (RNP) complexes and microinjecting these complexes into zebrafish embryos, we achieved up to 15.99% editing efficiency at target loci—an improvement of 6.81- to 11.46-fold over PE2. Additionally, we observed 16.60% 6 bp insertions and 13.18% 10 bp deletions at the adgrf3b locus, representing a 3.13-fold increase over PE2. Finally, we used PE to introduce desired edits at the tyr locus, successfully generating zebrafish with the tyr P302L mutation that exhibited melanin reduction. These findings demonstrate that PE7 significantly enhances prime editing efficiency in fish, providing novel tools for functional gene studies and genetic breeding in aquatic species. Full article
(This article belongs to the Special Issue Animal Transgene and Gene Editing Technologies: Applications and Future Perspectives)
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