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Journal of Fungi, Volume 6, Issue 1

2020 March - 39 articles

Cover Story: Confocal Scanning Fluorescence Microscopy: Green fluorescence represents P. brasiliensis yeast cells coated with F-1.4 monoclonal antibody followed by Alexa Fluor 488-labeled goat anti-mouse IgG. Blue Fluorescence represents Calcofluor-White Stain dying P. brasiliensis cell wall polysaccharides polymers. View this paper.
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Articles (39)

  • Article
  • Open Access
9 Citations
4,660 Views
15 Pages

Frequency of Invasive Fungal Disease in Adults: Experience of a Specialized Laboratory in Medellín, Colombia (2009–2015)

  • Yorlady Valencia,
  • Diego H. Cáceres,
  • Catalina de Bedout,
  • Luz E. Cano and
  • Ángela Restrepo

20 March 2020

Invasive fungal diseases (IFD) contribute significantly to worldwide morbidity and mortality, but their frequency is not well-described in some countries. The present work describes the frequency of IFD in a specialized laboratory in Colombia. A retr...

  • Article
  • Open Access
54 Citations
10,375 Views
13 Pages

19 March 2020

Rice blast disease is caused by the ascomycete fungus Pyricularia oryzae and is one of the most destructive rice diseases in the world. The objectives of this study were investigating various fungal morphological characteristics and performing a phyl...

  • Article
  • Open Access
30 Citations
4,450 Views
18 Pages

Genome Sequence Analysis of Auricularia heimuer Combined with Genetic Linkage Map

  • Ming Fang,
  • Xiaoe Wang,
  • Ying Chen,
  • Peng Wang,
  • Lixin Lu,
  • Jia Lu,
  • Fangjie Yao and
  • Youmin Zhang

16 March 2020

Auricularia heimuer is one of the most popular edible fungi in China. In this study, the whole genome of A. heimuer was sequenced on the Illumina HiSeq X system and compared with other mushrooms genomes. As a wood-rotting fungus, a total of 509 carbo...

  • Article
  • Open Access
15 Citations
5,843 Views
13 Pages

Baseline Chest Computed Tomography as Standard of Care in High-Risk Hematology Patients

  • Jannik Stemler,
  • Caroline Bruns,
  • Sibylle C. Mellinghoff,
  • Nael Alakel,
  • Hamdi Akan,
  • Michelle Ananda-Rajah,
  • Jutta Auberger,
  • Peter Bojko,
  • Pranatharthi H. Chandrasekar and
  • Philipp Koehler
  • + 29 authors

13 March 2020

Baseline chest computed tomography (BCT) in high-risk hematology patients allows for the early diagnosis of invasive pulmonary aspergillosis (IPA). The distribution of BCT implementation in hematology departments and impact on outcome is unknown. A w...

  • Review
  • Open Access
14 Citations
7,236 Views
26 Pages

11 March 2020

Disease is a complex outcome that can occur as a result of pathogen-mediated damage, host-mediated damage or both. This has led to the revolutionary concept of the damage response framework (DRF) that defines microbial virulence as a function of host...

  • Review
  • Open Access
17 Citations
4,839 Views
14 Pages

10 March 2020

Acyl-CoA-binding protein (ACBP) is an important protein with a size of about 10 kDa. It has a high binding affinity for C12–C22 acyl-CoA esters and participates in lipid metabolism. ACBP and its family of proteins have been found in all eukaryo...

  • Article
  • Open Access
7 Citations
3,457 Views
9 Pages

5 March 2020

Phaeohyphomycosis of the central nervous system (CNS) is a life-threatening infection associated with severe morbidity. New approaches to treatment of CNS phaeohyphomycosis are critically needed. We therefore studied posaconazole with or without casp...

  • Review
  • Open Access
13 Citations
5,820 Views
19 Pages

SUMOylation in Human Pathogenic Fungi: Role in Physiology and Virulence

  • Mahima Sagar Sahu,
  • Sandip Patra,
  • Kundan Kumar and
  • Rupinder Kaur

4 March 2020

The small ubiquitin-related modifier (SUMO) protein is an important component of the post-translational protein modification systems in eukaryotic cells. It is known to modify hundreds of proteins involved in diverse cellular processes, ranging from...

  • Review
  • Open Access
46 Citations
8,082 Views
28 Pages

Immunotherapy against Systemic Fungal Infections Based on Monoclonal Antibodies

  • Camila Boniche,
  • Suélen Andreia Rossi,
  • Brenda Kischkel,
  • Filipe Vieira Barbalho,
  • Ágata Nogueira D’Aurea Moura,
  • Joshua D. Nosanchuk,
  • Luiz R. Travassos and
  • Carlos Pelleschi Taborda

29 February 2020

The increasing incidence in systemic fungal infections in humans has increased focus for the development of fungal vaccines and use of monoclonal antibodies. Invasive mycoses are generally difficult to treat, as most occur in vulnerable individuals,...

  • Review
  • Open Access
69 Citations
11,113 Views
13 Pages

Candida auris: A Decade of Understanding of an Enigmatic Pathogenic Yeast

  • Ryan Kean,
  • Jason Brown,
  • Dolunay Gulmez,
  • Alicia Ware and
  • Gordon Ramage

26 February 2020

Candida auris is an enigmatic yeast that continues to stimulate interest within the mycology community due its rapid and simultaneous emergence of distinct clades. In the last decade, almost 400 manuscripts have contributed to our understanding of th...

  • Review
  • Open Access
276 Citations
34,974 Views
20 Pages

Vulvovaginal Candidiasis: A Current Understanding and Burning Questions

  • Hubertine M. E. Willems,
  • Salman S. Ahmed,
  • Junyan Liu,
  • Zhenbo Xu and
  • Brian M. Peters

25 February 2020

Candida albicans, along with other closely related Candida species, are the primary causative agents of vulvovaginal candidiasis (VVC)—a multifactorial infectious disease of the lower female reproductive tract resulting in pathologic inflammati...

  • Review
  • Open Access
187 Citations
18,306 Views
11 Pages

Aspiring Antifungals: Review of Current Antifungal Pipeline Developments

  • Thomas J. Gintjee,
  • Monica A. Donnelley and
  • George R. Thompson

25 February 2020

Invasive fungal infections are associated with significant morbidity and mortality, and their management is restricted to a variety of agents from five established classes of antifungal medication. In practice, existing antifungal agents are often co...

  • Article
  • Open Access
49 Citations
6,319 Views
15 Pages

Effects of Seedling Age on Colonization Patterns of Citrus limon Plants by Endophytic Beauveria bassiana and Metarhizium anisopliae and Their Influence on Seedlings Growth

  • Bamisope Steve Bamisile,
  • Komivi Senyo Akutse,
  • Chandra Kanta Dash,
  • Muhammad Qasim,
  • Luis Carlos Ramos Aguila,
  • Hafiza Javaria Ashraf,
  • Wei Huang,
  • Mubasher Hussain,
  • Shiman Chen and
  • Liande Wang

25 February 2020

The inoculation methods, the fungal strains, and several other factors are known to influent the success of fungal entomopathogens colonization in plants. The physiological status of the plant could also be another determinant. In the present study,...

  • Review
  • Open Access
14 Citations
5,494 Views
16 Pages

24 February 2020

Invasive fungal infections pose an increasing threat to human hosts, especially in immunocompromised individuals. In response to the increasing morbidity and mortality of fungal infections, numerous groups have shown great strides in uncovering novel...

  • Review
  • Open Access
23 Citations
9,903 Views
37 Pages

The Role of Secretory Pathways in Candida albicans Pathogenesis

  • Christiane Rollenhagen,
  • Sahil Mamtani,
  • Dakota Ma,
  • Reva Dixit,
  • Susan Eszterhas and
  • Samuel A. Lee

24 February 2020

Candida albicans is a fungus that is a commensal organism and a member of the normal human microbiota. It has the ability to transition into an opportunistic invasive pathogen. Attributes that support pathogenesis include secretion of virulence-assoc...

  • Article
  • Open Access
2 Citations
3,612 Views
9 Pages

13 February 2020

In the dimorphism (mold/yeast) Histoplasma capsulatum (Hc) literature are reports that yeast (the so-called pathogenic form) uniquely expresses a cysteine dioxygenase (CDO, approx. 10,500 dal) activity which the mold morphotype (the so-called saproph...

  • Review
  • Open Access
43 Citations
7,847 Views
25 Pages

An Overview on Conventional and Non-Conventional Therapeutic Approaches for the Treatment of Candidiasis and Underlying Resistance Mechanisms in Clinical Strains

  • Sara B. Salazar,
  • Rita S. Simões,
  • Nuno A. Pedro,
  • Maria Joana Pinheiro,
  • Maria Fernanda N. N. Carvalho and
  • Nuno P. Mira

10 February 2020

Fungal infections and, in particular, those caused by species of the Candida genus, are growing at an alarming rate and have high associated rates of mortality and morbidity. These infections, generally referred as candidiasis, range from common supe...

  • Review
  • Open Access
32 Citations
6,611 Views
20 Pages

4 February 2020

Antibodies represent an important element in the adaptive immune response and a major tool to eliminate microbial pathogens. For many bacterial and viral infections, efficient vaccines exist, but not for fungal pathogens. For a long time, antibodies...

  • Review
  • Open Access
119 Citations
8,901 Views
9 Pages

3 February 2020

In healthcare settings, Candida spp. cause invasive disease with high mortality. The overwhelming majority of cases are associated with the use of critically-needed medical devices, such as vascular catheters. On the surface of these indwelling mater...

  • Review
  • Open Access
2 Citations
3,472 Views
10 Pages

31 January 2020

Fungal infections remain a global health threat with high morbidity and mortality. The human immune system must, therefore, perpetually defend against invasive fungal infections. Phagocytosis is critical for the clearance of fungal pathogens, as this...

  • Article
  • Open Access
16 Citations
4,096 Views
11 Pages

Breakthrough Bloodstream Infections Caused by Echinocandin-Resistant Candida tropicalis: An Emerging Threat to Immunocompromised Patients with Hematological Malignancies

  • Maroun M. Sfeir,
  • Cristina Jiménez-Ortigosa,
  • Maria N. Gamaletsou,
  • Audrey N. Schuetz,
  • Rosemary Soave,
  • Koen Van Besien,
  • Catherine B. Small,
  • David S. Perlin and
  • Thomas J. Walsh

31 January 2020

Background. Candida tropicalis is a virulent fungal pathogen for which echinocandins are the primary therapy. Emergence of resistance to echinocandins of C. tropicalis carries potentially ominous therapeutic implications. Methods. We describe herein...

  • Review
  • Open Access
42 Citations
7,835 Views
14 Pages

Blood Aspergillus PCR: The Good, the Bad, and the Ugly

  • Matthias Egger,
  • Jeffrey D. Jenks,
  • Martin Hoenigl and
  • Juergen Prattes

27 January 2020

Invasive Aspergillosis (IA) is one of the most common invasive fungal diseases and is accompanied by high morbidity and mortality. In order to maximize patient outcomes and survival, early and rapid diagnosis has been shown to be pivotal. Hence, diag...

  • Review
  • Open Access
75 Citations
8,816 Views
14 Pages

On Commensalism of Candida

  • Jesus A. Romo and
  • Carol A. Kumamoto

17 January 2020

Candida species are both opportunistic fungal pathogens and common members of the human mycobiome. Over the years, the main focus of the fungal field has been on understanding the pathogenic potential and disease manifestation of these organisms. The...

  • Review
  • Open Access
411 Citations
57,326 Views
28 Pages

Oral Candidiasis: A Disease of Opportunity

  • Taissa Vila,
  • Ahmed S. Sultan,
  • Daniel Montelongo-Jauregui and
  • Mary Ann Jabra-Rizk

16 January 2020

Oral candidiasis, commonly referred to as “thrush,” is an opportunistic fungal infection that commonly affects the oral mucosa. The main causative agent, Candida albicans, is a highly versatile commensal organism that is well adapted to i...

  • Review
  • Open Access
16 Citations
7,079 Views
19 Pages

Unraveling How Candida albicans Forms Sexual Biofilms

  • Austin M. Perry,
  • Aaron D. Hernday and
  • Clarissa J. Nobile

15 January 2020

Biofilms, structured and densely packed communities of microbial cells attached to surfaces, are considered to be the natural growth state for a vast majority of microorganisms. The ability to form biofilms is an important virulence factor for most p...

  • Review
  • Open Access
34 Citations
17,878 Views
8 Pages

13 January 2020

Many pathogenic Candida species possess the ability to undergo a reversible morphological transition from yeast to filamentous cells. In Candida albicans, the most frequently isolated human fungal pathogen, multiple lines of evidence strongly suggest...

  • Brief Report
  • Open Access
6 Citations
4,345 Views
7 Pages

10 January 2020

Diagnosis of invasive fungal infections is complex, and the lack of standardization of molecular methods is still a challenge. Several methods are available for the diagnosis of invasive aspergillosis, but their effectiveness will depend on the studi...

  • Review
  • Open Access
26 Citations
8,996 Views
15 Pages

Detecting Azole-Antifungal Resistance in Aspergillus fumigatus by Pyrosequencing

  • Mireille H. van der Torre,
  • Lilyann Novak-Frazer and
  • Riina Rautemaa-Richardson

10 January 2020

Guidelines on the diagnosis and management of Aspergillus disease recommend a multi-test approach including CT scans, culture, fungal biomarker tests, microscopy and fungal PCR. The first-line treatment of confirmed invasive aspergillosis (IA) consis...

  • Review
  • Open Access
26 Citations
13,057 Views
18 Pages

27 December 2019

Candida albicans is a fungal species that can colonize multiple niches in the human host where it can grow either as a commensal or as an opportunistic pathogen. The genome of C. albicans has long been of considerable interest, given that it is highl...

  • Article
  • Open Access
22 Citations
5,277 Views
9 Pages

Quantification of Pneumocystis jirovecii: Cross-Platform Comparison of One qPCR Assay with Leading Platforms and Six Master Mixes

  • Sarah Dellière,
  • Maud Gits-Muselli,
  • P. Lewis White,
  • Carlo Mengoli,
  • Stéphane Bretagne and
  • Alexandre Alanio

26 December 2019

Diagnosis of Pneumocystis jirovecii pneumonia relies on nucleic acid quantification in respiratory samples. Lack of standardization among molecular assays results in significant differences among assays/centers. To further promote standardization, we...

  • Review
  • Open Access
38 Citations
10,167 Views
16 Pages

24 December 2019

N-acetylglucosamine (GlcNAc) is being increasingly recognized for its ability to stimulate cell signaling. This amino sugar is best known as a component of cell wall peptidoglycan in bacteria, cell wall chitin in fungi and parasites, exoskeletons of...

  • Article
  • Open Access
9 Citations
4,178 Views
12 Pages

Chromosome-Level Comprehensive Genome of Mangrove Sediment-Derived Fungus Penicillium variabile HXQ-H-1

  • Ling Peng,
  • Liangwei Li,
  • Xiaochuan Liu,
  • Jianwei Chen,
  • Chengcheng Shi,
  • Wenjie Guo,
  • Qiwu Xu,
  • Guangyi Fan,
  • Xin Liu and
  • Dehai Li

23 December 2019

Penicillium is an ascomycetous genus widely distributed in the natural environment and is one of the dominant fungi involved in the decomposition of mangroves, which can produce a variety of antitumor compounds and bioactive substances. However, in m...

  • Review
  • Open Access
31 Citations
6,608 Views
14 Pages

20 December 2019

Clinically relevant members of the Mucorales group can grow and are found in diverse ecological spaces such as soil, dust, water, decomposing vegetation, on and in food, and in hospital environments but are poorly represented in mycobiome studies of...

  • Review
  • Open Access
107 Citations
11,617 Views
29 Pages

Candida spp./Bacteria Mixed Biofilms

  • Maria Elisa Rodrigues,
  • Fernanda Gomes and
  • Célia F. Rodrigues

20 December 2019

The ability to form biofilms is a common feature of microorganisms, such as bacteria or fungi. These consortiums can colonize a variety of surfaces, such as host tissues, dentures, and catheters, resulting in infections highly resistant to drugs, whe...

  • Review
  • Open Access
23 Citations
5,210 Views
8 Pages

The Role of Molecular Tests in the Diagnosis of Disseminated Histoplasmosis

  • Izadora Clezar da Silva Vasconcellos,
  • Daiane Flores Dalla Lana and
  • Alessandro C. Pasqualotto

18 December 2019

Histoplasmosis is an emerging fungal disease, with global distribution. The disseminated form of the disease is a more severe infection, generally associated with AIDS. Classic diagnostic methods for histoplasmosis consist of microscopy, culture, and...

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J. Fungi - ISSN 2309-608X